isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48860 AT3G48860 AT3G48860 AT5G23700 AT5G23700 AT5G23700 |
| fragaria_vesca | FvH4_5g09200 FvH4_5g09200 FvH4_5g09200 |
| malus_domestica | MD06G1132600.v1.1 MD14G1149000.v1.1 |
| prunus_persica | Prupe.5G143600_v2.0.a1 Prupe.5G143600_v2.0.a1 |
| pyrus_communis | pycom06g12420 pycom14g12380 |
| rosa_chinensis | RchiOBHm_Chr7g0188961 |
| rosa_laevigata | RLG00000004646 |
| rosa_multiflora | Rmu_ssc0000113.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00265900 |
| rosa_rugosa | Rorug06G0495200 Rorug06G0495200 |
| rosa_samantha | Rh7AG099800 Rh7BG102000 Rh7CG103300 Rh7DG101800 |
| rosa_wichuraiana | Rw7G008610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1665, 1711 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 21, 1320 |
| AatII | GACGTC | 1 cut(s) | 1324 |
| Acc36I | ACCTGC | 2 cut(s) | 25, 181 |
| AccB1I | GGYRCC | 1 cut(s) | 299 |
| AccBSI | CCGCTC | 1 cut(s) | 48 |
| AccII | CGCG | 5 cut(s) | 35, 37, 106, 122, 176 |
| AclWI | GGATC | 3 cut(s) | 12, 503, 1364 |
| AcoI | YGGCCR | 1 cut(s) | 259 |
| AcsI | RAATTY | 1 cut(s) | 781 |
| AcuI | CTGAAG | 5 cut(s) | 384, 690, 912, 948, 1490 |
| AcyI | GRCGYC | 3 cut(s) | 200, 300, 1321 |
| AfaI | GTAC | 4 cut(s) | 32, 456, 627, 1470 |
| AfeI | AGCGCT | 1 cut(s) | 667 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 144, 190, 342, 480, 1216 |
| AgsI | TTSAA | 5 cut(s) | 519, 1356, 1394, 1429, 1604 |
| AjnI | CCWGG | 5 cut(s) | 64, 183, 256, 577, 747 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 37, 69 |
| Alw26I | GTCTC | 2 cut(s) | 7, 366 |
| AlwI | GGATC | 3 cut(s) | 12, 503, 1364 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 184, 926 |
| Ama87I | CYCGRG | 1 cut(s) | 242 |
| Aor51HI | AGCGCT | 1 cut(s) | 667 |
| AoxI | GGCC | 3 cut(s) | 259, 344, 1308 |
| ApeKI | GCWGC | 9 cut(s) | 60, 178, 599, 800, 812, 896, 899, 1039, 1527 |
| ApoI | RAATTY | 1 cut(s) | 781 |
| AseI | ATTAAT | 1 cut(s) | 1413 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 993 |
| AspLEI | GCGC | 9 cut(s) | 37, 39, 94, 178, 183, 190, 302, 668, 1532 |
| AspS9I | GGNCC | 1 cut(s) | 1309 |
| AsuHPI | GGTGA | 2 cut(s) | 1178, 1379 |
| AvaI | CYCGRG | 1 cut(s) | 242 |
| BalI | TGGCCA | 1 cut(s) | 261 |
| BanI | GGYRCC | 1 cut(s) | 299 |
| BbsI | GAAGAC | 3 cut(s) | 273, 314, 1488 |
| BbvCI | CCTCAGC | 1 cut(s) | 1586 |
| BbvI | GCAGC | 9 cut(s) | 72, 190, 586, 787, 799, 908, 911, 1051, 1539 |
| BccI | CCATC | 2 cut(s) | 824, 976 |
| BceAI | ACGGC | 2 cut(s) | 325, 1506 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1618, 1652 |
| BciT130I | CCWGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| BciVI | GTATCC | 1 cut(s) | 754 |
| BcoDI | GTCTC | 2 cut(s) | 7, 366 |
| BfaI | CTAG | 5 cut(s) | 351, 731, 806, 1268, 1464 |
| BfmI | CTRYAG | 2 cut(s) | 429, 1686 |
| BfoI | RGCGCY | 3 cut(s) | 184, 303, 669 |
| BfuAI | ACCTGC | 2 cut(s) | 25, 181 |
| BfuI | GTATCC | 1 cut(s) | 754 |
| BglII | AGATCT | 2 cut(s) | 353, 425 |
| Bme1390I | CCNGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| BmeT110I | CYCGRG | 1 cut(s) | 242 |
| BmgT120I | GGNCC | 1 cut(s) | 1309 |
| BmiI | GGNNCC | 4 cut(s) | 55, 149, 248, 301 |
| BmrFI | CCNGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| BmrI | ACTGGG | 2 cut(s) | 1033, 1224 |
| BmsI | GCATC | 5 cut(s) | 422, 500, 1279, 1543, 1631 |
| BmuI | ACTGGG | 2 cut(s) | 1033, 1224 |
| BpiI | GAAGAC | 3 cut(s) | 273, 314, 1488 |
| BpmI | CTGGAG | 2 cut(s) | 274, 471 |
| Bpu10I | CCTNAGC | 2 cut(s) | 702, 1586 |
| BpuEI | CTTGAG | 3 cut(s) | 731, 957, 983 |
| Bsa29I | ATCGAT | 1 cut(s) | 1638 |
| BsaAI | YACGTR | 1 cut(s) | 608 |
| BsaHI | GRCGYC | 3 cut(s) | 200, 300, 1321 |
| BsaI | GGTCTC | 1 cut(s) | 7 |
| BsaJI | CCNNGG | 5 cut(s) | 64, 256, 374, 577, 747 |
| BsaWI | WCCGGW | 1 cut(s) | 1364 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 37, 67, 340, 370, 726, 756 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 144, 190, 342, 480, 1216 |
| Bse118I | RCCGGY | 1 cut(s) | 88 |
| Bse1I | ACTGG | 5 cut(s) | 26, 40, 130, 1028, 1219 |
| Bse3DI | GCAATG | 1 cut(s) | 301 |
| BseBI | CCWGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| BseCI | ATCGAT | 1 cut(s) | 1638 |
| BseDI | CCNNGG | 5 cut(s) | 64, 256, 374, 577, 747 |
| BseGI | GGATG | 6 cut(s) | 491, 835, 1294, 1361, 1567, 1642 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 144, 190, 342, 480, 1216 |
| BseMI | GCAATG | 1 cut(s) | 301 |
| BseMII | CTCAG | 3 cut(s) | 113, 1577, 1665 |
| BseNI | ACTGG | 5 cut(s) | 26, 40, 130, 1028, 1219 |
| BsePI | GCGCGC | 1 cut(s) | 35 |
| BseRI | GAGGAG | 2 cut(s) | 25, 1089 |
| BseXI | GCAGC | 9 cut(s) | 72, 190, 586, 787, 799, 908, 911, 1051, 1539 |
| BseYI | CCCAGC | 1 cut(s) | 1594 |
| BsgI | GTGCAG | 2 cut(s) | 465, 1058 |
| Bsh1236I | CGCG | 5 cut(s) | 35, 37, 106, 122, 176 |
| BshFI | GGCC | 3 cut(s) | 261, 346, 1310 |
| BshNI | GGYRCC | 1 cut(s) | 299 |
| BshVI | ATCGAT | 1 cut(s) | 1638 |
| BsiHKCI | CYCGRG | 1 cut(s) | 242 |
| BsiSI | CCGG | 5 cut(s) | 77, 89, 326, 365, 1365 |
| BslFI | GGGAC | 1 cut(s) | 563 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 144, 190, 342, 480, 1216 |
| BsmAI | GTCTC | 2 cut(s) | 7, 366 |
| BsmBI | CGTCTC | 1 cut(s) | 366 |
| BsmFI | GGGAC | 1 cut(s) | 563 |
| BsnI | GGCC | 3 cut(s) | 261, 346, 1310 |
| Bso31I | GGTCTC | 1 cut(s) | 7 |
| BsoBI | CYCGRG | 1 cut(s) | 242 |
| Bsp143I | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| BspANI | GGCC | 3 cut(s) | 261, 346, 1310 |
| BspCNI | CTCAG | 3 cut(s) | 112, 1578, 1664 |
| BspDI | ATCGAT | 1 cut(s) | 1638 |
| BspFNI | CGCG | 5 cut(s) | 35, 37, 106, 122, 176 |
| BspLI | GGNNCC | 4 cut(s) | 55, 149, 248, 301 |
| BspMAI | CTGCAG | 2 cut(s) | 433, 1690 |
| BspMI | ACCTGC | 2 cut(s) | 25, 181 |
| BspPI | GGATC | 3 cut(s) | 12, 503, 1364 |
| BspQI | GCTCTTC | 1 cut(s) | 1453 |
| BspT107I | GGYRCC | 1 cut(s) | 299 |
| BspTNI | GGTCTC | 1 cut(s) | 7 |
| BsrBI | CCGCTC | 1 cut(s) | 48 |
| BsrDI | GCAATG | 1 cut(s) | 301 |
| BsrFI | RCCGGY | 1 cut(s) | 88 |
| BsrI | ACTGG | 5 cut(s) | 26, 40, 130, 1028, 1219 |
| BssAI | RCCGGY | 1 cut(s) | 88 |
| BssECI | CCNNGG | 5 cut(s) | 64, 256, 374, 577, 747 |
| BssHII | GCGCGC | 1 cut(s) | 35 |
| BssMI | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| BssNI | GRCGYC | 3 cut(s) | 200, 300, 1321 |
| Bst2UI | CCWGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| Bst4CI | ACNGT | 5 cut(s) | 139, 214, 279, 887, 1536 |
| Bst6I | CTCTTC | 7 cut(s) | 861, 945, 972, 1107, 1398, 1453, 1708 |
| BstACI | GRCGYC | 3 cut(s) | 200, 300, 1321 |
| BstBAI | YACGTR | 1 cut(s) | 608 |
| BstC8I | GCNNGC | 5 cut(s) | 37, 90, 263, 462, 466 |
| BstDEI | CTNAG | 5 cut(s) | 99, 702, 1397, 1586, 1651 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 188, 478 |
| BstF5I | GGATG | 6 cut(s) | 491, 835, 1294, 1361, 1567, 1642 |
| BstFNI | CGCG | 5 cut(s) | 35, 37, 106, 122, 176 |
| BstH2I | RGCGCY | 3 cut(s) | 184, 303, 669 |
| BstHHI | GCGC | 9 cut(s) | 37, 39, 94, 178, 183, 190, 302, 668, 1532 |
| BstKTI | GATC | 7 cut(s) | 7, 241, 356, 428, 511, 1372, 1642 |
| BstMAI | GTCTC | 2 cut(s) | 7, 366 |
| BstMBI | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| BstNI | CCWGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| BstSCI | CCNGG | 5 cut(s) | 64, 183, 256, 577, 747 |
| BstSFI | CTRYAG | 2 cut(s) | 429, 1686 |
| BstUI | CGCG | 5 cut(s) | 35, 37, 106, 122, 176 |
| BstV1I | GCAGC | 9 cut(s) | 72, 190, 586, 787, 799, 908, 911, 1051, 1539 |
| BstV2I | GAAGAC | 3 cut(s) | 273, 314, 1488 |
| BstX2I | RGATCY | 2 cut(s) | 353, 425 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1381 |
| BstYI | RGATCY | 2 cut(s) | 353, 425 |
| Bsu15I | ATCGAT | 1 cut(s) | 1638 |
| BsuI | GTATCC | 1 cut(s) | 754 |
| BsuRI | GGCC | 3 cut(s) | 261, 346, 1310 |
| BsuTUI | ATCGAT | 1 cut(s) | 1638 |
| BtgZI | GCGATG | 1 cut(s) | 95 |
| BtsCI | GGATG | 6 cut(s) | 491, 835, 1294, 1361, 1567, 1642 |
| BtsI | GCAGTG | 1 cut(s) | 438 |
| BtsIMutI | CAGTG | 5 cut(s) | 33, 47, 438, 892, 1212 |
| BveI | ACCTGC | 2 cut(s) | 25, 181 |
| Cac8I | GCNNGC | 5 cut(s) | 37, 90, 263, 462, 466 |
| CaiI | CAGNNNCTG | 2 cut(s) | 184, 926 |
| CfoI | GCGC | 9 cut(s) | 37, 39, 94, 178, 183, 190, 302, 668, 1532 |
| Cfr10I | RCCGGY | 1 cut(s) | 88 |
| Cfr13I | GGNCC | 1 cut(s) | 1309 |
| ClaI | ATCGAT | 1 cut(s) | 1638 |
| CseI | GACGC | 3 cut(s) | 189, 776, 818 |
| Csp6I | GTAC | 4 cut(s) | 31, 455, 626, 1469 |
| CviAII | CATG | 6 cut(s) | 196, 272, 1043, 1076, 1472, 1550 |
| CviQI | GTAC | 4 cut(s) | 31, 455, 626, 1469 |
| DdeI | CTNAG | 5 cut(s) | 99, 702, 1397, 1586, 1651 |
| DinI | GGCGCC | 1 cut(s) | 301 |
| DpnI | GATC | 7 cut(s) | 6, 240, 355, 427, 510, 1371, 1641 |
| DpnII | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 21, 1320 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 21, 1320 |
| EaeI | YGGCCR | 1 cut(s) | 259 |
| Eam1104I | CTCTTC | 7 cut(s) | 861, 945, 972, 1107, 1398, 1453, 1708 |
| EarI | CTCTTC | 7 cut(s) | 861, 945, 972, 1107, 1398, 1453, 1708 |
| Eco31I | GGTCTC | 1 cut(s) | 7 |
| Eco47III | AGCGCT | 1 cut(s) | 667 |
| Eco57I | CTGAAG | 5 cut(s) | 384, 690, 912, 948, 1490 |
| Eco88I | CYCGRG | 1 cut(s) | 242 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 188, 478 |
| EcoRII | CCWGG | 5 cut(s) | 64, 183, 256, 577, 747 |
| EgeI | GGCGCC | 1 cut(s) | 301 |
| EheI | GGCGCC | 1 cut(s) | 301 |
| Esp3I | CGTCTC | 1 cut(s) | 366 |
| FaeI | CATG | 6 cut(s) | 199, 275, 1046, 1079, 1475, 1553 |
| FaqI | GGGAC | 1 cut(s) | 563 |
| FatI | CATG | 6 cut(s) | 195, 271, 1042, 1075, 1471, 1549 |
| FauI | CCCGC | 2 cut(s) | 305, 540 |
| FauNDI | CATATG | 2 cut(s) | 1049, 1108 |
| FokI | GGATG | 6 cut(s) | 478, 842, 1301, 1348, 1574, 1629 |
| FspBI | CTAG | 5 cut(s) | 351, 731, 806, 1268, 1464 |
| GlaI | GCGC | 9 cut(s) | 36, 38, 93, 177, 182, 189, 301, 667, 1531 |
| GsaI | CCCAGC | 1 cut(s) | 1598 |
| GsuI | CTGGAG | 2 cut(s) | 274, 471 |
| HaeII | RGCGCY | 3 cut(s) | 184, 303, 669 |
| HaeIII | GGCC | 3 cut(s) | 261, 346, 1310 |
| HapII | CCGG | 5 cut(s) | 77, 89, 326, 365, 1365 |
| HgaI | GACGC | 3 cut(s) | 189, 776, 818 |
| HhaI | GCGC | 9 cut(s) | 37, 39, 94, 178, 183, 190, 302, 668, 1532 |
| Hin1I | GRCGYC | 3 cut(s) | 200, 300, 1321 |
| Hin1II | CATG | 6 cut(s) | 199, 275, 1046, 1079, 1475, 1553 |
| Hin6I | GCGC | 9 cut(s) | 35, 37, 92, 176, 181, 188, 300, 666, 1530 |
| HinP1I | GCGC | 9 cut(s) | 35, 37, 92, 176, 181, 188, 300, 666, 1530 |
| HpaII | CCGG | 5 cut(s) | 77, 89, 326, 365, 1365 |
| HphI | GGTGA | 2 cut(s) | 1178, 1379 |
| Hpy166II | GTNNAC | 1 cut(s) | 31 |
| Hpy188I | TCNGA | 8 cut(s) | 9, 251, 378, 662, 865, 914, 928, 1654 |
| Hpy188III | TCNNGA | 6 cut(s) | 650, 806, 974, 1000, 1196, 1325 |
| Hpy8I | GTNNAC | 1 cut(s) | 31 |
| Hpy99I | CGWCG | 6 cut(s) | 205, 214, 227, 230, 233, 236 |
| HpyAV | CCTTC | 5 cut(s) | 126, 525, 731, 766, 1214 |
| HpyCH4III | ACNGT | 5 cut(s) | 139, 214, 279, 887, 1536 |
| HpyCH4IV | ACGT | 3 cut(s) | 589, 607, 1321 |
| HpyCH4V | TGCA | 8 cut(s) | 275, 431, 446, 725, 815, 1039, 1304, 1688 |
| HpyF3I | CTNAG | 5 cut(s) | 99, 702, 1397, 1586, 1651 |
| HpySE526I | ACGT | 3 cut(s) | 589, 607, 1321 |
| Hsp92I | GRCGYC | 3 cut(s) | 200, 300, 1321 |
| Hsp92II | CATG | 6 cut(s) | 199, 275, 1046, 1079, 1475, 1553 |
| HspAI | GCGC | 9 cut(s) | 35, 37, 92, 176, 181, 188, 300, 666, 1530 |
| KasI | GGCGCC | 1 cut(s) | 299 |
| KroI | GCCGGC | 1 cut(s) | 88 |
| KroNI | GCCGGC | 1 cut(s) | 90 |
| Kzo9I | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| LguI | GCTCTTC | 1 cut(s) | 1453 |
| LmnI | GCTCC | 6 cut(s) | 45, 663, 706, 915, 1102, 1582 |
| Lsp1109I | GCAGC | 9 cut(s) | 72, 190, 586, 787, 799, 908, 911, 1051, 1539 |
| LweI | GCATC | 5 cut(s) | 422, 500, 1279, 1543, 1631 |
| MaeI | CTAG | 5 cut(s) | 351, 731, 806, 1268, 1464 |
| MaeII | ACGT | 3 cut(s) | 589, 607, 1321 |
| MaeIII | GTNAC | 1 cut(s) | 1205 |
| MalI | GATC | 7 cut(s) | 6, 240, 355, 427, 510, 1371, 1641 |
| MbiI | CCGCTC | 1 cut(s) | 48 |
| MboI | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| MfeI | CAATTG | 1 cut(s) | 504 |
| MflI | RGATCY | 2 cut(s) | 353, 425 |
| MlsI | TGGCCA | 1 cut(s) | 261 |
| MluCI | AATT | 7 cut(s) | 504, 758, 781, 846, 1186, 1410, 1599 |
| MluNI | TGGCCA | 1 cut(s) | 261 |
| Mly113I | GGCGCC | 1 cut(s) | 300 |
| MlyI | GAGTC | 3 cut(s) | 31, 334, 478 |
| Mox20I | TGGCCA | 1 cut(s) | 261 |
| MreI | CGCCGGCG | 1 cut(s) | 88 |
| MroNI | GCCGGC | 1 cut(s) | 88 |
| MroXI | GAANNNNTTC | 1 cut(s) | 993 |
| MscI | TGGCCA | 1 cut(s) | 261 |
| MseI | TTAA | 3 cut(s) | 564, 968, 1413 |
| Msp20I | TGGCCA | 1 cut(s) | 261 |
| MspI | CCGG | 5 cut(s) | 77, 89, 326, 365, 1365 |
| MspR9I | CCNGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| MteI | GCGCNGCGC | 1 cut(s) | 179 |
| MunI | CAATTG | 1 cut(s) | 504 |
| MvaI | CCWGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| MvnI | CGCG | 5 cut(s) | 35, 37, 106, 122, 176 |
| NaeI | GCCGGC | 1 cut(s) | 90 |
| NarI | GGCGCC | 1 cut(s) | 300 |
| NdeI | CATATG | 2 cut(s) | 1049, 1108 |
| NdeII | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| NgoMIV | GCCGGC | 1 cut(s) | 88 |
| NlaIII | CATG | 6 cut(s) | 199, 275, 1046, 1079, 1475, 1553 |
| NlaIV | GGNNCC | 4 cut(s) | 55, 149, 248, 301 |
| NmeAIII | GCCGAG | 1 cut(s) | 322 |
| NmuCI | GTSAC | 1 cut(s) | 1205 |
| PauI | GCGCGC | 1 cut(s) | 35 |
| PciSI | GCTCTTC | 1 cut(s) | 1453 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 228, 231 |
| PdiI | GCCGGC | 1 cut(s) | 90 |
| PdmI | GAANNNNTTC | 1 cut(s) | 993 |
| PfeI | GAWTC | 7 cut(s) | 129, 252, 923, 1067, 1148, 1328, 1352 |
| PleI | GAGTC | 3 cut(s) | 30, 334, 478 |
| PluTI | GGCGCC | 1 cut(s) | 303 |
| PpsI | GAGTC | 3 cut(s) | 30, 334, 478 |
| Ppu21I | YACGTR | 1 cut(s) | 608 |
| PshBI | ATTAAT | 1 cut(s) | 1413 |
| PsiI | TTATAA | 2 cut(s) | 1665, 1711 |
| Psp6I | CCWGG | 5 cut(s) | 64, 183, 256, 577, 747 |
| PspFI | CCCAGC | 1 cut(s) | 1594 |
| PspGI | CCWGG | 5 cut(s) | 64, 183, 256, 577, 747 |
| PspN4I | GGNNCC | 4 cut(s) | 55, 149, 248, 301 |
| PspPI | GGNCC | 1 cut(s) | 1309 |
| PstI | CTGCAG | 2 cut(s) | 433, 1690 |
| PstNI | CAGNNNCTG | 2 cut(s) | 184, 926 |
| PsuI | RGATCY | 2 cut(s) | 353, 425 |
| PteI | GCGCGC | 1 cut(s) | 35 |
| RsaI | GTAC | 4 cut(s) | 32, 456, 627, 1470 |
| RsaNI | GTAC | 4 cut(s) | 31, 455, 626, 1469 |
| SapI | GCTCTTC | 1 cut(s) | 1453 |
| SaqAI | TTAA | 3 cut(s) | 564, 968, 1413 |
| Sau3AI | GATC | 7 cut(s) | 4, 238, 353, 425, 508, 1369, 1639 |
| Sau96I | GGNCC | 1 cut(s) | 1309 |
| SchI | GAGTC | 3 cut(s) | 31, 334, 478 |
| ScrFI | CCNGG | 5 cut(s) | 66, 185, 258, 579, 749 |
| SfaNI | GCATC | 5 cut(s) | 422, 500, 1279, 1543, 1631 |
| SfcI | CTRYAG | 2 cut(s) | 429, 1686 |
| SfoI | GGCGCC | 1 cut(s) | 301 |
| SgrAI | CRCCGGYG | 1 cut(s) | 88 |
| SmlI | CTYRAG | 3 cut(s) | 710, 972, 998 |
| SmoI | CTYRAG | 3 cut(s) | 710, 972, 998 |
| Sse9I | AATT | 7 cut(s) | 504, 758, 781, 846, 1186, 1410, 1599 |
| SspDI | GGCGCC | 1 cut(s) | 299 |
| SspI | AATATT | 2 cut(s) | 646, 1228 |
| SspMI | CTAG | 5 cut(s) | 351, 731, 806, 1268, 1464 |
| StyD4I | CCNGG | 5 cut(s) | 64, 183, 256, 577, 747 |
| TaaI | ACNGT | 5 cut(s) | 139, 214, 279, 887, 1536 |
| TaiI | ACGT | 3 cut(s) | 592, 610, 1324 |
| TaqI | TCGA | 3 cut(s) | 1479, 1638, 1695 |
| TasI | AATT | 7 cut(s) | 504, 758, 781, 846, 1186, 1410, 1599 |
| TatI | WGTACW | 2 cut(s) | 454, 1468 |
| TauI | GCSGC | 5 cut(s) | 109, 164, 173, 176, 268 |
| TfiI | GAWTC | 7 cut(s) | 129, 252, 923, 1067, 1148, 1328, 1352 |
| Tru1I | TTAA | 3 cut(s) | 564, 968, 1413 |
| Tru9I | TTAA | 3 cut(s) | 564, 968, 1413 |
| TscAI | CASTG | 5 cut(s) | 33, 47, 438, 892, 1219 |
| TseFI | GTSAC | 1 cut(s) | 1205 |
| TseI | GCWGC | 9 cut(s) | 60, 178, 599, 800, 812, 896, 899, 1039, 1527 |
| Tsp45I | GTSAC | 1 cut(s) | 1205 |
| TspDTI | ATGAA | 5 cut(s) | 600, 627, 848, 1125, 1695 |
| TspGWI | ACGGA | 1 cut(s) | 348 |
| TspRI | CASTG | 5 cut(s) | 33, 47, 438, 892, 1219 |
| VspI | ATTAAT | 1 cut(s) | 1413 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 188, 478 |
| XapI | RAATTY | 1 cut(s) | 781 |
| XbaI | TCTAGA | 1 cut(s) | 805 |
| XmnI | GAANNNNTTC | 1 cut(s) | 993 |
| XspI | CTAG | 5 cut(s) | 351, 731, 806, 1268, 1464 |
| ZraI | GACGTC | 1 cut(s) | 1322 |