Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006502

Physical Location & Seq

Genomic Coordinates Forward (+)

59275844 .. 59281663

Gene Structure 5820 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00265900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGGATCGGAGGAGACCTGCGAGTCCAGTGTACTCGCGCCAGTGGAGCGGAGGTTCGAGCAGCCCGGGCTCATCTCCGGCGATGTCGCCGGCGCACCCTCAGTCGCGGCTCAATCCTTCCGCGACTGGATTCTCCACCGTCAAGCGGAACCAGAACTTCGCCGCCAAAGCCGCCGCGCAGCGGCTTGCGCAGGTCATGGCGTCGCAGACGACGGTTGACGACGACGACGACGACGACGATCTCGGGTTCCGATTCCCTGGCCAGCCGCCTCATGCGCCGTCTTCTTACTCCAGCAATGGCGCCAATAACGGCGGGAGTGGTCTTCCGGCGATTTCCACGACTCGGCCTACTAGATCTCCGTCTCCGGCGGTAATTTCCAAACCTGTTTTAAATTACGATGCCGCTTTTGAATCTGATGTAGTTTCCATTGAACGATGCATTGTTAATTTTGTAGATTCAATTGTGGCTACATTATGGCTAATTCTGATTCTTGTATTGTTTACGCGGGACATTGGACAGCTTAACTCACAAGCCCCAGGAGACGAACGTGAAGTTGCTGCTCTACGTGATGAACTTGATATGGTACAAGAAGAAAACGAGAATATTCTTGACAAGCTCCGAAGCGCAGAAGAAAGGTGGGAACAAGCAGAAGCCAGAGCTAAGGAGCTTGAGAAACAGGTTGCAACACTAGGAGAAGGTGTATCCCTGGAAGCCAGACTATTGAGCAGGAAGGAAGAAAATTTGCGTCAAAAACAGGCTGCTCTAGACGCTGCAAGACAAAACGAGGATGGGAAAGATAAGGAAATTGCCACTCTTCATTCAGAAGTTGAGAACCTAAAAGACTGTGCTGAAGCAGCAGCGGAAAAGCTCCGAGAAGCAGAATCTGAAGCAAACACTCTTCGCTCAAAGACGCAAAGAATGATTTTAACTCAAGAAGAGATGGAGGAAGTTGTTCTCAAGAGATGTTGGCTTTCTCGCTACTGGGGTTTAGCTGTGCAGCATGGCATATGTGCTGATATAGCAGAATCAAAGCATGAGCATTGGTCATCTTTAGCTCCTCTTCCATATGAAGTCATCATTTCTGCTGGACAAAAGGCAAAGGAGGATTCTTGGGAAAAAAGTGGTGATGACCCAGATAGAAACAAGGGAATACTTTCTTCCCTGCAATCCATTGAAAAGTGGAGGATTGAAATAGCTGACAAAGAGGATGTTGAGGATGCTGTCGCACTTGCATTGGCCCGACATAGACGTCCAGATTCTATTCGGCAGTCAGCTTTTGATTCAAAACCATCCGGTGATCCCAAGTTTATGGAGGCATTTGGTGACGGCATGAGGGTGAATAGTAAAGCTGACTTTGAGTTTTATCATTTGTTCCTTATATTCTTCACTCTCTCCTTACCCAAAAGTGATGTAATGGTGTTTGGTCGGCTATTAGGACTTGTGTTTCAGAAGCTTTTTAAAGATGCTTCAAAACTTAGTGAAGAGGAGATTAATGATATTCGTTTCAAGGAGGCTTGGCTGACTTACTTTTGGAGAAGAGCTAGAGTACATGGTGTCGAAGACGATATAGCAGATGATAGGCTTCAGTTTTGGATAAGCCGTAGCAGTGCACAGTCGCCAACTTCACATGATGCTGTGGATGTGGAGGGCGGTTTATTGGAGCTGAGGAAGCTGGGAATTGAAAAGCAACTCTGGGAAGCATCACGCAAGGAAATCGATCATCCCAACTCAGATGTTACTTATAATCACAATCACAAATCTTCTGCAGATTTCGACACCTCTTCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0007049 GO:0008150 GO:0009825 GO:0009987 GO:0016020 GO:0016049 GO:0022402 GO:0030135 GO:0030136 GO:0031410 GO:0031982 GO:0032506 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0051301 GO:0061640 GO:0071944 GO:0097708 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

596

Amino Acids

66.67

Weight (kDa)

5.13

Isoelectric Point (pI)

59.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48860 AT3G48860 AT3G48860 AT5G23700 AT5G23700 AT5G23700
fragaria_vesca	FvH4_5g09200 FvH4_5g09200 FvH4_5g09200
malus_domestica	MD06G1132600.v1.1 MD14G1149000.v1.1
prunus_persica	Prupe.5G143600_v2.0.a1 Prupe.5G143600_v2.0.a1
pyrus_communis	pycom06g12420 pycom14g12380
rosa_chinensis	RchiOBHm_Chr7g0188961
rosa_laevigata	RLG00000004646
rosa_multiflora	Rmu_ssc0000113.1_g000004
rosa_roxburghii	Rroxscaffold_3G00265900
rosa_rugosa	Rorug06G0495200 Rorug06G0495200
rosa_samantha	Rh7AG099800 Rh7BG102000 Rh7CG103300 Rh7DG101800
rosa_wichuraiana	Rw7G008610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1743
AasI	GACNNNNNNGTC	2 cut(s)	21, 1248
AatII	GACGTC	1 cut(s)	1252
Acc16I	TGCGCA	1 cut(s)	189
Acc36I	ACCTGC	2 cut(s)	25, 181
AccB1I	GGYRCC	1 cut(s)	299
AccBSI	CCGCTC	1 cut(s)	48
AccII	CGCG	5 cut(s)	37, 106, 122, 176, 505
AclWI	GGATC	2 cut(s)	12, 1292
AcoI	YGGCCR	1 cut(s)	259
AcsI	RAATTY	1 cut(s)	739
AcuI	CTGAAG	3 cut(s)	870, 906, 1568
AcyI	GRCGYC	3 cut(s)	200, 300, 1249
AfaI	GTAC	3 cut(s)	32, 585, 1548
AfiI	CCNNNNNNNGG	3 cut(s)	144, 180, 342
AgsI	TTSAA	9 cut(s)	410, 431, 459, 1175, 1190, 1284, 1470, 1507, 1682
AjnI	CCWGG	3 cut(s)	256, 535, 705
AloI	GAACNNNNNNTCC	2 cut(s)	37, 69
Alw21I	GWGCWC	1 cut(s)	1612
Alw26I	GTCTC	3 cut(s)	7, 366, 534
Alw44I	GTGCAC	1 cut(s)	1608
AlwI	GGATC	2 cut(s)	12, 1292
AlwNI	CAGNNNCTG	1 cut(s)	884
Ama87I	CYCGRG	2 cut(s)	64, 242
AoxI	GGCC	3 cut(s)	259, 344, 1236
ApaLI	GTGCAC	1 cut(s)	1608
ApeKI	GCWGC	8 cut(s)	60, 178, 557, 758, 770, 854, 857, 997
ApoI	RAATTY	1 cut(s)	739
AseI	ATTAAT	1 cut(s)	1491
Asp700I	GAANNNNTTC	2 cut(s)	951, 1153
AspLEI	GCGC	7 cut(s)	39, 94, 178, 190, 277, 302, 626
AspS9I	GGNCC	1 cut(s)	1237
AsuC2I	CCSGG	2 cut(s)	65, 66
AsuHPI	GGTGA	4 cut(s)	1136, 1307, 1334, 1348
AvaI	CYCGRG	2 cut(s)	64, 242
BaeGI	GKGCMC	1 cut(s)	1612
BalI	TGGCCA	1 cut(s)	261
BanI	GGYRCC	1 cut(s)	299
BanII	GRGCYC	1 cut(s)	71
BbsI	GAAGAC	3 cut(s)	273, 314, 1566
Bbv12I	GWGCWC	1 cut(s)	1612
BbvCI	CCTCAGC	1 cut(s)	1664
BbvI	GCAGC	8 cut(s)	72, 190, 544, 745, 757, 866, 869, 1009
BccI	CCATC	3 cut(s)	782, 934, 1297
BceAI	ACGGC	4 cut(s)	262, 325, 1342, 1584
BcgI	CGANNNNNNTGC	2 cut(s)	1696, 1730
BciT130I	CCWGG	3 cut(s)	258, 537, 707
BciVI	GTATCC	1 cut(s)	712
BcnI	CCSGG	2 cut(s)	65, 66
BcoDI	GTCTC	3 cut(s)	7, 366, 534
BfaI	CTAG	4 cut(s)	351, 689, 764, 1542
BfmI	CTRYAG	1 cut(s)	1764
BfoI	RGCGCY	1 cut(s)	303
BfuAI	ACCTGC	2 cut(s)	25, 181
BfuI	GTATCC	1 cut(s)	712
BglII	AGATCT	1 cut(s)	353
Bme1390I	CCNGG	5 cut(s)	65, 66, 258, 537, 707
BmeT110I	CYCGRG	2 cut(s)	64, 242
BmgT120I	GGNCC	1 cut(s)	1237
BmiI	GGNNCC	3 cut(s)	149, 248, 301
BmrFI	CCNGG	5 cut(s)	65, 66, 258, 537, 707
BmrI	ACTGGG	1 cut(s)	991
BmsI	GCATC	6 cut(s)	388, 425, 1207, 1453, 1621, 1709
BmuI	ACTGGG	1 cut(s)	991
BpiI	GAAGAC	3 cut(s)	273, 314, 1566
BpmI	CTGGAG	1 cut(s)	274
Bpu10I	CCTNAGC	2 cut(s)	660, 1664
BpuEI	CTTGAG	3 cut(s)	689, 915, 941
BpuMI	CCSGG	2 cut(s)	65, 66
Bsa29I	ATCGAT	1 cut(s)	1716
BsaAI	YACGTR	1 cut(s)	566
BsaHI	GRCGYC	3 cut(s)	200, 300, 1249
BsaI	GGTCTC	1 cut(s)	7
BsaJI	CCNNGG	4 cut(s)	64, 256, 535, 705
BsaWI	WCCGGW	1 cut(s)	1292
BsaXI	ACNNNNNCTCC	6 cut(s)	37, 67, 340, 370, 684, 714
Bsc4I	CCNNNNNNNGG	3 cut(s)	144, 180, 342
Bse118I	RCCGGY	1 cut(s)	88
Bse1I	ACTGG	4 cut(s)	26, 40, 130, 986
Bse3DI	GCAATG	1 cut(s)	301
BseBI	CCWGG	3 cut(s)	258, 537, 707
BseCI	ATCGAT	1 cut(s)	1716
BseDI	CCNNGG	4 cut(s)	64, 256, 535, 705
BseGI	GGATG	6 cut(s)	793, 1213, 1222, 1289, 1645, 1720
BseLI	CCNNNNNNNGG	3 cut(s)	144, 180, 342
BseMI	GCAATG	1 cut(s)	301
BseMII	CTCAG	3 cut(s)	113, 1655, 1743
BseNI	ACTGG	4 cut(s)	26, 40, 130, 986
BseRI	GAGGAG	3 cut(s)	25, 1047, 1499
BseSI	GKGCMC	1 cut(s)	1612
BseXI	GCAGC	8 cut(s)	72, 190, 544, 745, 757, 866, 869, 1009
BseYI	CCCAGC	1 cut(s)	1672
BsgI	GTGCAG	1 cut(s)	1016
Bsh1236I	CGCG	5 cut(s)	37, 106, 122, 176, 505
BshFI	GGCC	3 cut(s)	261, 346, 1238
BshNI	GGYRCC	1 cut(s)	299
BshVI	ATCGAT	1 cut(s)	1716
BsiHKAI	GWGCWC	1 cut(s)	1612
BsiHKCI	CYCGRG	2 cut(s)	64, 242
BsiSI	CCGG	6 cut(s)	65, 77, 89, 326, 365, 1293
BslFI	GGGAC	1 cut(s)	521
BslI	CCNNNNNNNGG	3 cut(s)	144, 180, 342
BsmAI	GTCTC	3 cut(s)	7, 366, 534
BsmBI	CGTCTC	2 cut(s)	366, 534
BsmFI	GGGAC	1 cut(s)	521
BsnI	GGCC	3 cut(s)	261, 346, 1238
Bso31I	GGTCTC	1 cut(s)	7
BsoBI	CYCGRG	2 cut(s)	64, 242
Bsp1286I	GDGCHC	2 cut(s)	71, 1612
Bsp143I	GATC	5 cut(s)	4, 238, 353, 1297, 1717
BspANI	GGCC	3 cut(s)	261, 346, 1238
BspCNI	CTCAG	3 cut(s)	112, 1656, 1742
BspDI	ATCGAT	1 cut(s)	1716
BspFNI	CGCG	5 cut(s)	37, 106, 122, 176, 505
BspLI	GGNNCC	3 cut(s)	149, 248, 301
BspMAI	CTGCAG	1 cut(s)	1768
BspMI	ACCTGC	2 cut(s)	25, 181
BspPI	GGATC	2 cut(s)	12, 1292
BspQI	GCTCTTC	1 cut(s)	1531
BspT107I	GGYRCC	1 cut(s)	299
BspTNI	GGTCTC	1 cut(s)	7
BsrBI	CCGCTC	1 cut(s)	48
BsrDI	GCAATG	1 cut(s)	301
BsrFI	RCCGGY	1 cut(s)	88
BsrI	ACTGG	4 cut(s)	26, 40, 130, 986
BssAI	RCCGGY	1 cut(s)	88
BssECI	CCNNGG	4 cut(s)	64, 256, 535, 705
BssMI	GATC	5 cut(s)	4, 238, 353, 1297, 1717
BssNI	GRCGYC	3 cut(s)	200, 300, 1249
Bst2UI	CCWGG	3 cut(s)	258, 537, 707
Bst4CI	ACNGT	4 cut(s)	139, 214, 845, 1614
Bst6I	CTCTTC	7 cut(s)	819, 903, 930, 1065, 1476, 1531, 1786
BstACI	GRCGYC	3 cut(s)	200, 300, 1249
BstBAI	YACGTR	1 cut(s)	566
BstC8I	GCNNGC	3 cut(s)	90, 186, 263
BstDEI	CTNAG	5 cut(s)	99, 660, 1475, 1664, 1729
BstF5I	GGATG	6 cut(s)	793, 1213, 1222, 1289, 1645, 1720
BstFNI	CGCG	5 cut(s)	37, 106, 122, 176, 505
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	7 cut(s)	39, 94, 178, 190, 277, 302, 626
BstKTI	GATC	5 cut(s)	7, 241, 356, 1300, 1720
BstMAI	GTCTC	3 cut(s)	7, 366, 534
BstMBI	GATC	5 cut(s)	4, 238, 353, 1297, 1717
BstNI	CCWGG	3 cut(s)	258, 537, 707
BstSCI	CCNGG	5 cut(s)	63, 64, 256, 535, 705
BstSFI	CTRYAG	1 cut(s)	1764
BstSLI	GKGCMC	1 cut(s)	1612
BstUI	CGCG	5 cut(s)	37, 106, 122, 176, 505
BstV1I	GCAGC	8 cut(s)	72, 190, 544, 745, 757, 866, 869, 1009
BstV2I	GAAGAC	3 cut(s)	273, 314, 1566
BstX2I	RGATCY	1 cut(s)	353
BstXI	CCANNNNNNTGG	1 cut(s)	1309
BstYI	RGATCY	1 cut(s)	353
Bsu15I	ATCGAT	1 cut(s)	1716
BsuI	GTATCC	1 cut(s)	712
BsuRI	GGCC	3 cut(s)	261, 346, 1238
BsuTUI	ATCGAT	1 cut(s)	1716
BtgZI	GCGATG	1 cut(s)	95
BtsCI	GGATG	6 cut(s)	793, 1213, 1222, 1289, 1645, 1720
BtsI	GCAGTG	1 cut(s)	1612
BtsIMutI	CAGTG	3 cut(s)	33, 47, 1612
BveI	ACCTGC	2 cut(s)	25, 181
Cac8I	GCNNGC	3 cut(s)	90, 186, 263
CaiI	CAGNNNCTG	1 cut(s)	884
CfoI	GCGC	7 cut(s)	39, 94, 178, 190, 277, 302, 626
Cfr10I	RCCGGY	1 cut(s)	88
Cfr13I	GGNCC	1 cut(s)	1237
Cfr9I	CCCGGG	1 cut(s)	64
ClaI	ATCGAT	1 cut(s)	1716
CseI	GACGC	4 cut(s)	189, 734, 776, 919
Csp6I	GTAC	3 cut(s)	31, 584, 1547
CviAII	CATG	7 cut(s)	196, 272, 1001, 1034, 1330, 1550, 1628
CviQI	GTAC	3 cut(s)	31, 584, 1547
DdeI	CTNAG	5 cut(s)	99, 660, 1475, 1664, 1729
DinI	GGCGCC	1 cut(s)	301
DpnI	GATC	5 cut(s)	6, 240, 355, 1299, 1719
DpnII	GATC	5 cut(s)	4, 238, 353, 1297, 1717
DraI	TTTAAA	2 cut(s)	390, 1459
DrdI	GACNNNNNNGTC	2 cut(s)	21, 1248
DseDI	GACNNNNNNGTC	2 cut(s)	21, 1248
EaeI	YGGCCR	1 cut(s)	259
Eam1104I	CTCTTC	7 cut(s)	819, 903, 930, 1065, 1476, 1531, 1786
EarI	CTCTTC	7 cut(s)	819, 903, 930, 1065, 1476, 1531, 1786
Eco24I	GRGCYC	1 cut(s)	71
Eco31I	GGTCTC	1 cut(s)	7
Eco57I	CTGAAG	3 cut(s)	870, 906, 1568
Eco88I	CYCGRG	2 cut(s)	64, 242
EcoRII	CCWGG	3 cut(s)	256, 535, 705
EcoT22I	ATGCAT	1 cut(s)	440
EcoT38I	GRGCYC	1 cut(s)	71
EgeI	GGCGCC	1 cut(s)	301
EheI	GGCGCC	1 cut(s)	301
Esp3I	CGTCTC	2 cut(s)	366, 534
FaeI	CATG	7 cut(s)	199, 275, 1004, 1037, 1333, 1553, 1631
FaqI	GGGAC	1 cut(s)	521
FatI	CATG	7 cut(s)	195, 271, 1000, 1033, 1329, 1549, 1627
FauI	CCCGC	2 cut(s)	305, 498
FauNDI	CATATG	2 cut(s)	1007, 1066
FokI	GGATG	6 cut(s)	800, 1220, 1229, 1276, 1652, 1707
FriOI	GRGCYC	1 cut(s)	71
FspBI	CTAG	4 cut(s)	351, 689, 764, 1542
FspI	TGCGCA	1 cut(s)	189
GlaI	GCGC	7 cut(s)	38, 93, 177, 189, 276, 301, 625
GsaI	CCCAGC	1 cut(s)	1676
GsuI	CTGGAG	1 cut(s)	274
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	3 cut(s)	261, 346, 1238
HapII	CCGG	6 cut(s)	65, 77, 89, 326, 365, 1293
HgaI	GACGC	4 cut(s)	189, 734, 776, 919
HhaI	GCGC	7 cut(s)	39, 94, 178, 190, 277, 302, 626
Hin1I	GRCGYC	3 cut(s)	200, 300, 1249
Hin1II	CATG	7 cut(s)	199, 275, 1004, 1037, 1333, 1553, 1631
Hin6I	GCGC	7 cut(s)	37, 92, 176, 188, 275, 300, 624
HinP1I	GCGC	7 cut(s)	37, 92, 176, 188, 275, 300, 624
HincII	GTYRAC	1 cut(s)	217
HindII	GTYRAC	1 cut(s)	217
HindIII	AAGCTT	1 cut(s)	1451
HpaII	CCGG	6 cut(s)	65, 77, 89, 326, 365, 1293
HphI	GGTGA	4 cut(s)	1136, 1307, 1334, 1348
Hpy166II	GTNNAC	4 cut(s)	31, 217, 501, 1610
Hpy188III	TCNNGA	5 cut(s)	608, 764, 932, 958, 1253
Hpy8I	GTNNAC	4 cut(s)	31, 217, 501, 1610
Hpy99I	CGWCG	8 cut(s)	205, 214, 224, 227, 230, 233, 236, 239
HpyAV	CCTTC	3 cut(s)	126, 689, 724
HpyCH4III	ACNGT	4 cut(s)	139, 214, 845, 1614
HpyCH4IV	ACGT	3 cut(s)	547, 565, 1249
HpyCH4V	TGCA	8 cut(s)	438, 683, 773, 997, 1165, 1232, 1610, 1766
HpyF3I	CTNAG	5 cut(s)	99, 660, 1475, 1664, 1729
HpySE526I	ACGT	3 cut(s)	547, 565, 1249
Hsp92I	GRCGYC	3 cut(s)	200, 300, 1249
Hsp92II	CATG	7 cut(s)	199, 275, 1004, 1037, 1333, 1553, 1631
HspAI	GCGC	7 cut(s)	37, 92, 176, 188, 275, 300, 624
KasI	GGCGCC	1 cut(s)	299
KroI	GCCGGC	1 cut(s)	88
KroNI	GCCGGC	1 cut(s)	90
Kzo9I	GATC	5 cut(s)	4, 238, 353, 1297, 1717
LguI	GCTCTTC	1 cut(s)	1531
LmnI	GCTCC	6 cut(s)	45, 621, 664, 873, 1060, 1660
Lsp1109I	GCAGC	8 cut(s)	72, 190, 544, 745, 757, 866, 869, 1009
LweI	GCATC	6 cut(s)	388, 425, 1207, 1453, 1621, 1709
MaeI	CTAG	4 cut(s)	351, 689, 764, 1542
MaeII	ACGT	3 cut(s)	547, 565, 1249
MaeIII	GTNAC	2 cut(s)	1322, 1735
MalI	GATC	5 cut(s)	6, 240, 355, 1299, 1719
MbiI	CCGCTC	1 cut(s)	48
MboI	GATC	5 cut(s)	4, 238, 353, 1297, 1717
MfeI	CAATTG	1 cut(s)	459
MflI	RGATCY	1 cut(s)	353
MhlI	GDGCHC	2 cut(s)	71, 1612
MlsI	TGGCCA	1 cut(s)	261
MluCI	AATT	8 cut(s)	372, 391, 445, 459, 480, 739, 804, 1677
MluNI	TGGCCA	1 cut(s)	261
Mly113I	GGCGCC	1 cut(s)	300
MlyI	GAGTC	2 cut(s)	31, 334
Mox20I	TGGCCA	1 cut(s)	261
Mph1103I	ATGCAT	1 cut(s)	440
MreI	CGCCGGCG	1 cut(s)	88
MroNI	GCCGGC	1 cut(s)	88
MroXI	GAANNNNTTC	2 cut(s)	951, 1153
MscI	TGGCCA	1 cut(s)	261
MseI	TTAA	6 cut(s)	389, 444, 522, 926, 1458, 1491
MslI	CAYNNNNRTG	1 cut(s)	1334
Msp20I	TGGCCA	1 cut(s)	261
MspA1I	CMGCKG	2 cut(s)	181, 860
MspI	CCGG	6 cut(s)	65, 77, 89, 326, 365, 1293
MspR9I	CCNGG	5 cut(s)	65, 66, 258, 537, 707
MunI	CAATTG	1 cut(s)	459
MvaI	CCWGG	3 cut(s)	258, 537, 707
MvnI	CGCG	5 cut(s)	37, 106, 122, 176, 505
NaeI	GCCGGC	1 cut(s)	90
NarI	GGCGCC	1 cut(s)	300
NciI	CCSGG	2 cut(s)	65, 66
NdeI	CATATG	2 cut(s)	1007, 1066
NdeII	GATC	5 cut(s)	4, 238, 353, 1297, 1717
NgoMIV	GCCGGC	1 cut(s)	88
NlaIII	CATG	7 cut(s)	199, 275, 1004, 1037, 1333, 1553, 1631
NlaIV	GGNNCC	3 cut(s)	149, 248, 301
NmeAIII	GCCGAG	1 cut(s)	322
NmuCI	GTSAC	1 cut(s)	1322
NsbI	TGCGCA	1 cut(s)	189
NsiI	ATGCAT	1 cut(s)	440
PciSI	GCTCTTC	1 cut(s)	1531
PcsI	WCGNNNNNNNCGW	4 cut(s)	225, 228, 231, 234
PdiI	GCCGGC	1 cut(s)	90
PdmI	GAANNNNTTC	2 cut(s)	951, 1153
PleI	GAGTC	2 cut(s)	30, 334
PluTI	GGCGCC	1 cut(s)	303
PpsI	GAGTC	2 cut(s)	30, 334
Ppu21I	YACGTR	1 cut(s)	566
PshBI	ATTAAT	1 cut(s)	1491
PsiI	TTATAA	1 cut(s)	1743
Psp6I	CCWGG	3 cut(s)	256, 535, 705
PspFI	CCCAGC	1 cut(s)	1672
PspGI	CCWGG	3 cut(s)	256, 535, 705
PspN4I	GGNNCC	3 cut(s)	149, 248, 301
PspPI	GGNCC	1 cut(s)	1237
PstI	CTGCAG	1 cut(s)	1768
PstNI	CAGNNNCTG	1 cut(s)	884
PsuI	RGATCY	1 cut(s)	353
RsaI	GTAC	3 cut(s)	32, 585, 1548
RsaNI	GTAC	3 cut(s)	31, 584, 1547
RseI	CAYNNNNRTG	1 cut(s)	1334
SapI	GCTCTTC	1 cut(s)	1531
SaqAI	TTAA	6 cut(s)	389, 444, 522, 926, 1458, 1491
Sau3AI	GATC	5 cut(s)	4, 238, 353, 1297, 1717
Sau96I	GGNCC	1 cut(s)	1237
SchI	GAGTC	2 cut(s)	31, 334
ScrFI	CCNGG	5 cut(s)	65, 66, 258, 537, 707
SduI	GDGCHC	2 cut(s)	71, 1612
SfaNI	GCATC	6 cut(s)	388, 425, 1207, 1453, 1621, 1709
SfcI	CTRYAG	1 cut(s)	1764
SfoI	GGCGCC	1 cut(s)	301
SgrAI	CRCCGGYG	1 cut(s)	88
SmaI	CCCGGG	1 cut(s)	66
SmiMI	CAYNNNNRTG	1 cut(s)	1334
SmlI	CTYRAG	3 cut(s)	668, 930, 956
SmoI	CTYRAG	3 cut(s)	668, 930, 956
SrfI	GCCCGGGC	1 cut(s)	66
Sse9I	AATT	8 cut(s)	372, 391, 445, 459, 480, 739, 804, 1677
SspDI	GGCGCC	1 cut(s)	299
SspI	AATATT	1 cut(s)	604
SspMI	CTAG	4 cut(s)	351, 689, 764, 1542
StyD4I	CCNGG	5 cut(s)	63, 64, 256, 535, 705
TaaI	ACNGT	4 cut(s)	139, 214, 845, 1614
TaiI	ACGT	3 cut(s)	550, 568, 1252
TaqI	TCGA	4 cut(s)	56, 1557, 1716, 1773
TasI	AATT	8 cut(s)	372, 391, 445, 459, 480, 739, 804, 1677
TatI	WGTACW	2 cut(s)	30, 1546
TauI	GCSGC	7 cut(s)	109, 164, 173, 176, 184, 268, 404
Tru1I	TTAA	6 cut(s)	389, 444, 522, 926, 1458, 1491
Tru9I	TTAA	6 cut(s)	389, 444, 522, 926, 1458, 1491
TscAI	CASTG	3 cut(s)	33, 47, 1612
TseFI	GTSAC	1 cut(s)	1322
TseI	GCWGC	8 cut(s)	60, 178, 557, 758, 770, 854, 857, 997
Tsp45I	GTSAC	1 cut(s)	1322
TspDTI	ATGAA	4 cut(s)	585, 806, 1083, 1773
TspGWI	ACGGA	1 cut(s)	348
TspMI	CCCGGG	1 cut(s)	64
TspRI	CASTG	3 cut(s)	33, 47, 1612
VneI	GTGCAC	1 cut(s)	1608
VspI	ATTAAT	1 cut(s)	1491
XapI	RAATTY	1 cut(s)	739
XbaI	TCTAGA	1 cut(s)	763
XmaI	CCCGGG	1 cut(s)	64
XmnI	GAANNNNTTC	2 cut(s)	951, 1153
XspI	CTAG	4 cut(s)	351, 689, 764, 1542
ZraI	GACGTC	1 cut(s)	1250
Zsp2I	ATGCAT	1 cut(s)	440

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.