Rmu_ssc0000160.1_g000011

Transmembrane and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000160.1
OG0014677
Physical Location & Seq
Reverse (-)
58735 .. 65199
6465 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2628 bp
atggcctctgacgacctctccacagtgtctgctctgactacgagaagtatgggttcaagaggccggagatacccaatttggctcttctcccactccctccttcaaaacccctttccaaaacccaattcttcaacccgaacccacttcacacctccaagatgctcgcttttcggagatgacgtagttgcaaaaaccaagcaccaatccgtttccgaccgagatactaatgaggacaactataggccttcaaagagggcgagagctgatttcaggccagagatgtttcagagcacattcggcggcactgtcacggatccatggattgataagcataatggagcaatacaatccataaagcggtcatcagtggatgccttacaagttcttcaagatggggaaaatctcaggaccaacggagcctgtcaactctcattatttattaagcacgattggaagttagactcttacatatcgtgtgccaagtggttcgctaaattgacacccctacttgcattaccgaattctaacctcttgcgatttcgatgctctgtgagcattaaacccgaagcagcgccggttatggaggccaagggagtactcacagagactcagagatacgccgccggagctctgtttgcgctggcgcttcaccagactcagatccaccagactcggccgttgaatgctttgctccctcttgaggaggagactgtcggggatggtgccagtgctggcaggaccatttcggtttcggatgatcccggcatttggatccacgagagttctggtttgctttatcctgttctcaggtttctaggagtggaggacaaatcgtggaaggggctgaaggaaactgcaggatcttcttcacaagttaggcatcatgtaggagcgttcttgaccttactaaaggagggagctgacgaggtggcttctgctgagaaaactgagaaggaagttgctctgactaaaactgttgataccatggttcgtagtgaggaaagcgccgatgctcatgcagtggataggagtgagaattatgaatatgaagctaaatgtcgtgaaaaattttccaatactgaaacggaaatagcgtctgaggtctctgacaaggcttatgaggccccaaagaggacagtttctgtgatatccactgaaataaaagatccaaatgaatctaaacaccttgaggtgcctcttgaagaggggaggcggctcagttatgagaagaaaataacacttctttatgcaattctgtcagcctgtgtggcagacaatagtgaaagtggcgataaagtaaggaacggttatgatgctcgacaccgcgtcgcattgaggttgctggcaacttggcttggggttgaatggctgaaagtggaagttatggagacgatggttgcttgttctttcatggcttcgttaaaggaggttgctaataaagggaagacagaaggtgttgatggagagaaaaaacaaaatgatgatacctcagtggaaaaatggaaacggggaggtctaattggtgcagctgctttaacaggaggaactttgatggctatcactggtggtctagctgctcctgcaattgcgcagggattgagtgctctagctcctgtattgggtggcattgttcctgcaataggagcagctggctttgctgctgcagcaactgccacggggtctgttactggttctcttgctgttgctgcatcatttggagctgctggggctggacttacgggaactaaaatggctagaagaatcggcaacattgaagaatttgagttcaaagcagttgaaggaacttataaccaaggacggctagcagtgggaatagtggtttcaggacttgtttttgaggatgaagattttatgaggccttgggaaggctacaatgaccacttggagaggtatgcactgtggtgggagtctaagaatttggttgcattgagcactgcaattcaagactggcttacttcaagaattgccctcgagttgatgaaagaaggtgccatgctgactgtattaaacacactagtagcagcgttcgctatgccagcaaccttggttactgcatctgatcttatagatagcaaatgggcgattgcagttgacagatcagataaagctgggaagatgcttgctgaagtattattgaagggactgcaaggcaacaggcctgtgacgctcataggattctcacttgggggcagagtgatttttaaatgtctagaatgtttagctgattcagaagggaacaatgctggtctggtagaaagggttgtcctgcttggagcaccagtgtcaattgaagatgaaaattgggaagatgcacggaagatggtggcagggagatttgtgaatgctttttctacaaatgattggacactaggagttgcctttcgtgcaagtttgctatctcaaggtttggctggaattcaagctgtcaatgttcctggcatcgaaaatgttgatgtaacgcaatttgtagaaggccactcatcctatctttggaagacgaaacagatcttggagctgcttgaacttgagtcttactaccctgttttcagaaaagaaaatacagaagataaaacatcccaggaacaaaacagctcggctggcacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF726

Protein Analysis

875

Amino Acids

95.09

Weight (kDa)

5.61

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF726 PF05277 500 - 849 3e-93 Protein of unknown function (DUF726)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014677)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g39020 FvH4_2g39020
malus_domestica MD15G1017500.v1.1
prunus_persica Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1 Prupe.1G370800_v2.0.a1
pyrus_communis pycom15g01540
rosa_chinensis RchiOBHm_Chr6g0302121
rosa_laevigata RLG00000011193
rosa_multiflora Rmu_ssc0000160.1_g000011
rosa_roxburghii Rroxscaffold_7G00166060
rosa_rugosa Rorug06G0312400
rosa_samantha Rh6AG424800 Rh6BG477600 Rh6CG437700 Rh6DG424800
rosa_wichuraiana Rw6G036800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1809
Acc16I TGCGCA 1 cut(s) 1590
AccB1I GGYRCC 3 cut(s) 722, 1192, 2009
AccII CGCG 1 cut(s) 1326
AciI CCGC 5 cut(s) 300, 358, 621, 1213, 1324
AclWI GGATC 8 cut(s) 308, 321, 655, 752, 766, 779, 868, 1160
AcoI YGGCCR 1 cut(s) 674
AcsI RAATTY 5 cut(s) 520, 1067, 1778, 1936, 2436
AcuI CTGAAG 2 cut(s) 866, 2166
AfaI GTAC 1 cut(s) 597
AfiI CCNNNNNNNGG 8 cut(s) 357, 700, 768, 1131, 1619, 1640, 1886, 2511
AhdI GACNNNNNGTC 1 cut(s) 1325
AhlI ACTAGT 1 cut(s) 2035
AjnI CCWGG 2 cut(s) 2455, 2598
AjuI GAANNNNNNNTTGG 4 cut(s) 109, 141, 2513, 2545
AleI CACNNNNGTG 1 cut(s) 1921
Alw21I GWGCWC 5 cut(s) 293, 631, 1606, 1955, 2299
Alw26I GTCTC 4 cut(s) 599, 701, 1108, 1382
AlwI GGATC 8 cut(s) 308, 321, 655, 752, 766, 779, 868, 1160
AlwNI CAGNNNCTG 3 cut(s) 29, 1142, 1670
Ama87I CYCGRG 1 cut(s) 1991
ApoI RAATTY 5 cut(s) 520, 1067, 1778, 1936, 2436
AspLEI GCGC 5 cut(s) 574, 640, 646, 1007, 1591
AspS9I GGNCC 3 cut(s) 408, 738, 1123
AsuC2I CCSGG 1 cut(s) 762
AsuHPI GGTGA 1 cut(s) 641
AsuNHI GCTAGC 1 cut(s) 1822
AvaI CYCGRG 1 cut(s) 1991
AvaII GGWCC 2 cut(s) 408, 738
BaeI ACNNNNGTAYC 4 cut(s) 972, 1005, 1476, 1509
BamHI GGATCC 2 cut(s) 313, 771
BanI GGYRCC 3 cut(s) 722, 1192, 2009
BanII GRGCYC 1 cut(s) 631
BauI CACGAG 1 cut(s) 776
BbsI GAAGAC 2 cut(s) 1451, 2522
Bbv12I GWGCWC 5 cut(s) 293, 631, 1606, 1955, 2299
BccI CCATC 6 cut(s) 386, 713, 1387, 1454, 1546, 2335
BceAI ACGGC 2 cut(s) 661, 1835
BcgI CGANNNNNNTGC 4 cut(s) 525, 559, 998, 1032
BciT130I CCWGG 2 cut(s) 2457, 2600
BcnI CCSGG 1 cut(s) 762
BcoDI GTCTC 4 cut(s) 599, 701, 1108, 1382
BcuI ACTAGT 1 cut(s) 2035
BfaI CTAG 8 cut(s) 815, 1571, 1607, 1755, 1823, 2036, 2231, 2390
BfmI CTRYAG 3 cut(s) 238, 855, 1662
BfoI RGCGCY 3 cut(s) 575, 647, 1008
BglI GCCNNNNNGGC 1 cut(s) 1268
BglII AGATCT 1 cut(s) 2526
BmcAI AGTACT 1 cut(s) 597
Bme1390I CCNGG 3 cut(s) 762, 2457, 2600
Bme18I GGWCC 2 cut(s) 408, 738
BmeRI GACNNNNNGTC 1 cut(s) 1325
BmeT110I CYCGRG 1 cut(s) 1991
BmgT120I GGNCC 3 cut(s) 408, 738, 1123
BmiI GGNNCC 7 cut(s) 315, 418, 724, 773, 1125, 1194, 2011
BmrFI CCNGG 3 cut(s) 762, 2457, 2600
BmtI GCTAGC 1 cut(s) 1826
BpiI GAAGAC 2 cut(s) 1451, 2522
BpuEI CTTGAG 4 cut(s) 719, 1208, 2406, 2567
BpuMI CCSGG 1 cut(s) 762
BsaBI GATNNNNATC 1 cut(s) 1556
BsaI GGTCTC 1 cut(s) 1108
BsaJI CCNNGG 8 cut(s) 317, 588, 984, 1674, 1813, 1880, 2064, 2598
BsaXI ACNNNNNCTCC 5 cut(s) 32, 165, 195, 2286, 2316
Bsc4I CCNNNNNNNGG 8 cut(s) 357, 700, 768, 1131, 1619, 1640, 1886, 2511
Bse118I RCCGGY 1 cut(s) 574
Bse1I ACTGG 5 cut(s) 726, 1567, 1693, 1973, 2300
Bse8I GATNNNNATC 1 cut(s) 1556
BseBI CCWGG 2 cut(s) 2457, 2600
BseDI CCNNGG 8 cut(s) 317, 588, 984, 1674, 1813, 1880, 2064, 2598
BseGI GGATG 6 cut(s) 376, 724, 760, 1867, 2501, 2594
BseJI GATNNNNATC 1 cut(s) 1556
BseLI CCNNNNNNNGG 8 cut(s) 357, 700, 768, 1131, 1619, 1640, 1886, 2511
BseMII CTCAG 9 cut(s) 418, 623, 671, 820, 930, 939, 1089, 1231, 1503
BseNI ACTGG 5 cut(s) 726, 1567, 1693, 1973, 2300
BseRI GAGGAG 2 cut(s) 716, 719
BseX3I CGGCCG 1 cut(s) 674
BseYI CCCAGC 2 cut(s) 1724, 2129
BsgI GTGCAG 1 cut(s) 1545
Bsh1236I CGCG 1 cut(s) 1326
Bsh1285I CGRYCG 2 cut(s) 217, 677
BshNI GGYRCC 3 cut(s) 722, 1192, 2009
BsiEI CGRYCG 2 cut(s) 217, 677
BsiHKAI GWGCWC 5 cut(s) 293, 631, 1606, 1955, 2299
BsiHKCI CYCGRG 1 cut(s) 1991
BsiSI CCGG 4 cut(s) 64, 575, 624, 762
BslFI GGGAC 1 cut(s) 2175
BslI CCNNNNNNNGG 8 cut(s) 357, 700, 768, 1131, 1619, 1640, 1886, 2511
BsmAI GTCTC 4 cut(s) 599, 701, 1108, 1382
BsmBI CGTCTC 1 cut(s) 1382
BsmFI GGGAC 1 cut(s) 2175
BsmI GAATGC 2 cut(s) 688, 2368
Bso31I GGTCTC 1 cut(s) 1108
BsoBI CYCGRG 1 cut(s) 1991
Bsp1286I GDGCHC 5 cut(s) 293, 631, 1606, 1955, 2299
Bsp143I GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
Bsp19I CCATGG 2 cut(s) 317, 984
BspACI CCGC 5 cut(s) 300, 358, 621, 1213, 1324
BspCNI CTCAG 9 cut(s) 417, 622, 670, 819, 931, 940, 1090, 1230, 1502
BspFNI CGCG 1 cut(s) 1326
BspLI GGNNCC 7 cut(s) 315, 418, 724, 773, 1125, 1194, 2011
BspMAI CTGCAG 2 cut(s) 859, 1666
BspOI GCTAGC 1 cut(s) 1826
BspPI GGATC 8 cut(s) 308, 321, 655, 752, 766, 779, 868, 1160
BspQI GCTCTTC 1 cut(s) 89
BspT107I GGYRCC 3 cut(s) 722, 1192, 2009
BspTNI GGTCTC 1 cut(s) 1108
BsrFI RCCGGY 1 cut(s) 574
BsrI ACTGG 5 cut(s) 726, 1567, 1693, 1973, 2300
BssAI RCCGGY 1 cut(s) 574
BssECI CCNNGG 8 cut(s) 317, 588, 984, 1674, 1813, 1880, 2064, 2598
BssMI GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
BssSI CACGAG 1 cut(s) 776
BssT1I CCWWGG 6 cut(s) 317, 588, 984, 1813, 1880, 2064
Bst2BI CACGAG 1 cut(s) 776
Bst2UI CCWGG 2 cut(s) 2457, 2600
Bst4CI ACNGT 8 cut(s) 25, 307, 712, 976, 1138, 1307, 1920, 2023
Bst6I CTCTTC 2 cut(s) 89, 1197
BstAPI GCANNNNNTGC 1 cut(s) 1670
BstC8I GCNNGC 9 cut(s) 164, 642, 733, 1344, 1651, 1824, 2058, 2142, 2620
BstDSI CCRYGG 3 cut(s) 317, 984, 1674
BstENI CCTNNNNNAGG 2 cut(s) 1638, 1884
BstF5I GGATG 6 cut(s) 376, 724, 760, 1867, 2501, 2594
BstFNI CGCG 1 cut(s) 1326
BstH2I RGCGCY 3 cut(s) 575, 647, 1008
BstHHI GCGC 5 cut(s) 574, 640, 646, 1007, 1591
BstKTI GATC 9 cut(s) 316, 663, 760, 774, 863, 1168, 2083, 2120, 2529
BstMAI GTCTC 4 cut(s) 599, 701, 1108, 1382
BstMBI GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
BstMCI CGRYCG 2 cut(s) 217, 677
BstNI CCWGG 2 cut(s) 2457, 2600
BstSCI CCNGG 3 cut(s) 760, 2455, 2598
BstSFI CTRYAG 3 cut(s) 238, 855, 1662
BstUI CGCG 1 cut(s) 1326
BstV2I GAAGAC 2 cut(s) 1451, 2522
BstX2I RGATCY 6 cut(s) 313, 660, 771, 860, 1165, 2526
BstYI RGATCY 6 cut(s) 313, 660, 771, 860, 1165, 2526
BstZI CGGCCG 1 cut(s) 674
BtgI CCRYGG 3 cut(s) 317, 984, 1674
BtsCI GGATG 6 cut(s) 376, 724, 760, 1867, 2501, 2594
BtsI GCAGTG 3 cut(s) 1026, 1833, 1953
Cac8I GCNNGC 9 cut(s) 164, 642, 733, 1344, 1651, 1824, 2058, 2142, 2620
CaiI CAGNNNCTG 3 cut(s) 29, 1142, 1670
CfoI GCGC 5 cut(s) 574, 640, 646, 1007, 1591
Cfr10I RCCGGY 1 cut(s) 574
Cfr13I GGNCC 3 cut(s) 408, 738, 1123
CseI GACGC 3 cut(s) 1083, 1315, 2194
Csp6I GTAC 1 cut(s) 596
CviAII CATG 6 cut(s) 318, 884, 985, 1016, 1411, 2014
CviQI GTAC 1 cut(s) 596
DpnI GATC 9 cut(s) 315, 662, 759, 773, 862, 1167, 2082, 2119, 2528
DpnII GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
DraI TTTAAA 1 cut(s) 2224
DriI GACNNNNNGTC 1 cut(s) 1325
EaeI YGGCCR 1 cut(s) 674
EagI CGGCCG 1 cut(s) 674
Eam1104I CTCTTC 2 cut(s) 89, 1197
Eam1105I GACNNNNNGTC 1 cut(s) 1325
EarI CTCTTC 2 cut(s) 89, 1197
Ecl136II GAGCTC 1 cut(s) 629
EclXI CGGCCG 1 cut(s) 674
Eco130I CCWWGG 6 cut(s) 317, 588, 984, 1813, 1880, 2064
Eco147I AGGCCT 3 cut(s) 244, 1879, 2179
Eco24I GRGCYC 1 cut(s) 631
Eco31I GGTCTC 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 1149
Eco47I GGWCC 2 cut(s) 408, 738
Eco52I CGGCCG 1 cut(s) 674
Eco53kI GAGCTC 1 cut(s) 629
Eco57I CTGAAG 2 cut(s) 866, 2166
Eco88I CYCGRG 1 cut(s) 1991
EcoICRI GAGCTC 1 cut(s) 629
EcoNI CCTNNNNNAGG 2 cut(s) 1638, 1884
EcoO109I RGGNCCY 1 cut(s) 1123
EcoRI GAATTC 2 cut(s) 520, 2436
EcoRII CCWGG 2 cut(s) 2455, 2598
EcoRV GATATC 1 cut(s) 1149
EcoT14I CCWWGG 6 cut(s) 317, 588, 984, 1813, 1880, 2064
EcoT38I GRGCYC 1 cut(s) 631
ErhI CCWWGG 6 cut(s) 317, 588, 984, 1813, 1880, 2064
Esp3I CGTCTC 1 cut(s) 1382
FaeI CATG 6 cut(s) 321, 887, 988, 1019, 1414, 2017
FalI AAGNNNNNCTT 2 cut(s) 1956, 1988
FaqI GGGAC 1 cut(s) 2175
FatI CATG 6 cut(s) 317, 883, 984, 1015, 1410, 2013
FokI GGATG 6 cut(s) 383, 731, 767, 1874, 2488, 2581
FriOI GRGCYC 1 cut(s) 631
FspBI CTAG 8 cut(s) 815, 1571, 1607, 1755, 1823, 2036, 2231, 2390
FspI TGCGCA 1 cut(s) 1590
GlaI GCGC 5 cut(s) 573, 639, 645, 1006, 1590
GsaI CCCAGC 2 cut(s) 1728, 2133
HaeII RGCGCY 3 cut(s) 575, 647, 1008
HapII CCGG 4 cut(s) 64, 575, 624, 762
HgaI GACGC 3 cut(s) 1083, 1315, 2194
HhaI GCGC 5 cut(s) 574, 640, 646, 1007, 1591
Hin1II CATG 6 cut(s) 321, 887, 988, 1019, 1414, 2017
Hin6I GCGC 5 cut(s) 572, 638, 644, 1005, 1589
HinP1I GCGC 5 cut(s) 572, 638, 644, 1005, 1589
HincII GTYRAC 2 cut(s) 425, 2113
HindII GTYRAC 2 cut(s) 425, 2113
HpaII CCGG 4 cut(s) 64, 575, 624, 762
HphI GGTGA 1 cut(s) 641
Hpy166II GTNNAC 2 cut(s) 425, 2113
Hpy8I GTNNAC 2 cut(s) 425, 2113
Hpy99I CGWCG 1 cut(s) 1331
HpyCH4III ACNGT 8 cut(s) 25, 307, 712, 976, 1138, 1307, 1920, 2023
HpyCH4IV ACGT 1 cut(s) 180
HpySE526I ACGT 1 cut(s) 180
Hsp92II CATG 6 cut(s) 321, 887, 988, 1019, 1414, 2017
HspAI GCGC 5 cut(s) 572, 638, 644, 1005, 1589
Kzo9I GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
LguI GCTCTTC 1 cut(s) 89
MaeI CTAG 8 cut(s) 815, 1571, 1607, 1755, 1823, 2036, 2231, 2390
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 5 cut(s) 307, 1684, 2068, 2182, 2476
MalI GATC 9 cut(s) 315, 662, 759, 773, 862, 1167, 2082, 2119, 2528
MboI GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
MfeI CAATTG 2 cut(s) 1584, 2307
MflI RGATCY 6 cut(s) 313, 660, 771, 860, 1165, 2526
MhlI GDGCHC 5 cut(s) 293, 631, 1606, 1955, 2299
MlyI GAGTC 6 cut(s) 455, 601, 649, 664, 1937, 2558
MmeI TCCRAC 1 cut(s) 237
MseI TTAA 6 cut(s) 441, 558, 1421, 1535, 2027, 2223
MslI CAYNNNNRTG 1 cut(s) 1921
MspA1I CMGCKG 2 cut(s) 1529, 1649
MspI CCGG 4 cut(s) 64, 575, 624, 762
MspR9I CCNGG 3 cut(s) 762, 2457, 2600
MunI CAATTG 2 cut(s) 1584, 2307
Mva1269I GAATGC 2 cut(s) 688, 2368
MvaI CCWGG 2 cut(s) 2457, 2600
MvnI CGCG 1 cut(s) 1326
NciI CCSGG 1 cut(s) 762
NcoI CCATGG 2 cut(s) 317, 984
NdeII GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
NheI GCTAGC 1 cut(s) 1822
NlaIII CATG 6 cut(s) 321, 887, 988, 1019, 1414, 2017
NlaIV GGNNCC 7 cut(s) 315, 418, 724, 773, 1125, 1194, 2011
NmeAIII GCCGAG 2 cut(s) 652, 2594
NmuCI GTSAC 2 cut(s) 307, 2182
NsbI TGCGCA 1 cut(s) 1590
OliI CACNNNNGTG 1 cut(s) 1921
PaeR7I CTCGAG 1 cut(s) 1991
PceI AGGCCT 3 cut(s) 244, 1879, 2179
PciSI GCTCTTC 1 cut(s) 89
PcsI WCGNNNNNNNCGW 2 cut(s) 177, 1091
PctI GAATGC 2 cut(s) 688, 2368
PfeI GAWTC 4 cut(s) 1175, 1761, 2196, 2246
PleI GAGTC 6 cut(s) 455, 601, 649, 664, 1936, 2557
PpsI GAGTC 6 cut(s) 455, 601, 649, 664, 1936, 2557
PsiI TTATAA 1 cut(s) 1809
Psp124BI GAGCTC 1 cut(s) 631
Psp6I CCWGG 2 cut(s) 2455, 2598
PspFI CCCAGC 2 cut(s) 1724, 2129
PspGI CCWGG 2 cut(s) 2455, 2598
PspN4I GGNNCC 7 cut(s) 315, 418, 724, 773, 1125, 1194, 2011
PspPI GGNCC 3 cut(s) 408, 738, 1123
PspXI VCTCGAGB 1 cut(s) 1991
PstI CTGCAG 2 cut(s) 859, 1666
PstNI CAGNNNCTG 3 cut(s) 29, 1142, 1670
PsuI RGATCY 6 cut(s) 313, 660, 771, 860, 1165, 2526
PvuII CAGCTG 2 cut(s) 1529, 1649
RsaI GTAC 1 cut(s) 597
RsaNI GTAC 1 cut(s) 596
RseI CAYNNNNRTG 1 cut(s) 1921
SacI GAGCTC 1 cut(s) 631
SapI GCTCTTC 1 cut(s) 89
SaqAI TTAA 6 cut(s) 441, 558, 1421, 1535, 2027, 2223
Sau3AI GATC 9 cut(s) 313, 660, 757, 771, 860, 1165, 2080, 2117, 2526
Sau96I GGNCC 3 cut(s) 408, 738, 1123
ScaI AGTACT 1 cut(s) 597
SchI GAGTC 6 cut(s) 455, 601, 649, 664, 1937, 2558
ScrFI CCNGG 3 cut(s) 762, 2457, 2600
SduI GDGCHC 5 cut(s) 293, 631, 1606, 1955, 2299
SfcI CTRYAG 3 cut(s) 238, 855, 1662
Sfr274I CTCGAG 1 cut(s) 1991
SinI GGWCC 2 cut(s) 408, 738
SlaI CTCGAG 1 cut(s) 1991
SmiMI CAYNNNNRTG 1 cut(s) 1921
SmlI CTYRAG 5 cut(s) 698, 1187, 1991, 2421, 2546
SmoI CTYRAG 5 cut(s) 698, 1187, 1991, 2421, 2546
SpeI ACTAGT 1 cut(s) 2035
SseBI AGGCCT 3 cut(s) 244, 1879, 2179
SsiI CCGC 5 cut(s) 300, 358, 621, 1213, 1324
SspMI CTAG 8 cut(s) 815, 1571, 1607, 1755, 1823, 2036, 2231, 2390
SstI GAGCTC 1 cut(s) 631
StuI AGGCCT 3 cut(s) 244, 1879, 2179
StyD4I CCNGG 3 cut(s) 760, 2455, 2598
StyI CCWWGG 6 cut(s) 317, 588, 984, 1813, 1880, 2064
TaaI ACNGT 8 cut(s) 25, 307, 712, 976, 1138, 1307, 1920, 2023
TaiI ACGT 1 cut(s) 183
TaqI TCGA 4 cut(s) 541, 1318, 1992, 2463
TaqII GACCGA 1 cut(s) 231
TatI WGTACW 1 cut(s) 595
TauI GCSGC 3 cut(s) 303, 623, 1216
TfiI GAWTC 4 cut(s) 1175, 1761, 2196, 2246
Tru1I TTAA 6 cut(s) 441, 558, 1421, 1535, 2027, 2223
Tru9I TTAA 6 cut(s) 441, 558, 1421, 1535, 2027, 2223
TseFI GTSAC 2 cut(s) 307, 2182
Tsp45I GTSAC 2 cut(s) 307, 2182
TspDTI ATGAA 7 cut(s) 1056, 1062, 1188, 1399, 1878, 2015, 2331
TspGWI ACGGA 5 cut(s) 196, 326, 429, 1100, 2350
VpaK11BI GGWCC 2 cut(s) 408, 738
XagI CCTNNNNNAGG 2 cut(s) 1638, 1884
XapI RAATTY 5 cut(s) 520, 1067, 1778, 1936, 2436
XbaI TCTAGA 1 cut(s) 2230
XcmI CCANNNNNNNNNTGG 1 cut(s) 782
XhoI CTCGAG 1 cut(s) 1991
XspI CTAG 8 cut(s) 815, 1571, 1607, 1755, 1823, 2036, 2231, 2390
ZrmI AGTACT 1 cut(s) 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.