Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000189.1

Orthogroup ID

OG0010572

Physical Location & Seq

Genomic Coordinates Reverse (-)

31610 .. 35610

Gene Structure 4001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000189.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3027 bp

atggtggtgcctttcattttcttgacacttttctctgttctaggaaccccctgttttgcttcttctttggtcagtgattttcatgtcttactcgcactcaagcaaggcttcaaactctccgaaccagctttaagtagttggaattcttcgtctccaagatcagtttgttccagctgggttggaattcgatgctctagaggacgagttgttgcagtggacttgacaggtttcagtctcgctggttctgtttcgcctatcatttcaggccttgaccggctttccgacctctctctagccggaaacaacttgtcaggaagcattgagattgcaaatttgggcagcctccgatccctcaacatctccgacaaccagttcagtgggggcttagactggaactactccagcattgccaacttggaggtttttgatgtctatgataacaacttgactgctccacttccacttgggattttgagcttgaataagctcaggtacttggatctcgggggcaacttcttctatgggaaagtcccaccattatacggcaaactagtcagcttggagtacttgtcactttcaggcaatgatcttaacggtgaaattccaggtgcgttgggcaatctcactaacctgagacaactttacttgggctactacaatgttttcgaaggtgggattccgaagcagtttgggaaattggtgaatcttgttcacatggatctttcaagttgcgaattggacggacaaatccctcatgagttggggaatttgaagtcccttgacacgctttatttgcatatcaatctgctctcaggctcaattccaaggcagttgggcaacttgacaaacttgctgtatttcgacctctccaacaatgcacttactggtgaaattccatccgagttttcaaatctcaaacagctcaagctctttaacctcttcatgaacagattgcacgggtctattccagactacgtcgcggatttgcctgatttggacaccctggggctgtggatgaacaacttcaccggcataattcctccgaaactcggccaaaatgggaagctgcagctgctcgatttgtcctcaaataagctcaccggtaaaatcccgccaaacttgtgttcatccaatcagctaaggatactaattctgttaaaaaactttctgtttggaccgatccctttaggcttggggacttgttcaagtctgactagagtcagactggggcagaattacctgaatggtagcattccaaatggcttaatttacttgcctctgctcaatttagcagagttgcaagataattatctttccggcaccttgtcggagaatgccaatagttcatcacagcctgccctattaggccagcttaatctgtcaaacaatctcttatccggtcctataccatattcgatttcaaatttctcttccctccaaatcctctcactcagtggaaatcagctctcgggtccaatcccaccatctataggccaactccatcaagtactaaaccttgatcttagccggaattcactctcgggtgaagttcctccggaaattggaaactgtttccatctgacttaccttgacatgagtcagaacaacctctccggctcaatcccatccgaaatctccaacattcatatactgaattacatcaacatgtcaagaaaccacttgaaccagagcatacccaaatccttgggaacaatgaagagcctcacaactgctgatttttccttcaatgacttgtcgggtaaactacccgaatccgggcagtttgccttcttcaatgcttcctctttcgctgggaatccccatctttgcggttccctcctaaacaatccttgcaatttcaccacaatcacaaacacacccggaaaacctcgggcagatttcaagctaatcttcgcattaggcttgctcatatgctccctagtatttgctgctgcagccataatgaaggccaaatcgttcacaagaaagggcccagaatcatggaaaatgacagcatttcagaaggtggaattcacaatgtcggacgtgctggaatgcgtgaaagatggaaatgtgattggaagaggaggagcaggaattgtttaccatgggaaaatgccaaacggggttgaaattgcagtgaaaaagcttcttggttttgggcttggtctagctccgaacagcacccatgtcgaccacggattcagagccgaaatccaaacactgggcaacattcgtcatcgaaacattgtgagattgctggcattttgctcaaacaaggacaccaatctgcttgtttacgagtacatgagaaatggaagcttgggagaggcattgcatgtcaacaacaaaaaaggcgggttattcttgagttggaatttgaggtacaaaattgcaattgaagctgccaaagggttgtgctatctccaccacgactgctccccattgatccttcaccgagacgtcaaatccaacaatattttgctcaattccagcttcgaagcacacgtggcggatttcgggctcgccaagttcttgatcgacggcggcggagcatcccagtgcatgtcagcaattgcaggctcttatggctacattgcgcctgagtatgcgtacacactgagggtggacgagaagagcgacgtatacagtttcggtgttgtcttgttagagcttctaacagggcgtcggccggtcggtgagtttggcgaaggcgtcgacatagtccaatggtgtaaaaaagtgaccaattgtcgcaaacaagacgccgcaaacattgttgatccaaggctggccatatctgtgcccaaagatgaagcaatgcacttgtttttcattgcaatgctttgcgtacaagaaaacagtgttgagaggccaacaatgagagaagttgttcaaatgttgtcagaatttcctcgcgcccattctcctgactcctcctcttctttaatcacttcccaacaattcaataacaaacaacaagatggtaaatgtcctcctaaatttaaacaacatattttagtttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009908 GO:0010073 GO:0010075 GO:0016020 GO:0022414 GO:0032501 GO:0032502 GO:0033612 GO:0040008 GO:0044464 GO:0048229 GO:0048367 GO:0048437 GO:0048507 GO:0048509 GO:0048608 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0061458 GO:0065007 GO:0071944 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1008

Amino Acids

109.83

Weight (kDa)

7.78

Isoelectric Point (pI)

33.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010572)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g28640
malus_domestica	MD08G1241900.v1.1 MD15G1435600.v1.1
prunus_persica	Prupe.1G579200_v2.0.a1 Prupe.1G579200_v2.0.a1 Prupe.1G579200_v2.0.a1 Prupe.1G579200_v2.0.a1 Prupe.1G579200_v2.0.a1 Prupe.1G579200_v2.0.a1
pyrus_communis	pycom08g20980 pycom15g38430
rosa_chinensis	RchiOBHm_Chr7g0220681
rosa_laevigata	RLG00000002210
rosa_multiflora	Rmu_ssc0000189.1_g000002
rosa_roxburghii	Rroxscaffold_3G00239220
rosa_rugosa	Rorug07G0196100
rosa_samantha	Rh7AG336900 Rh7BG327800 Rh7CG354900 Rh7DG333500
rosa_wichuraiana	Rw7G028740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2466
AccB1I	GGYRCC	2 cut(s)	7, 1319
AccB7I	CCANNNNNTGG	1 cut(s)	2224
AccI	GTMKAC	3 cut(s)	2193, 2646, 2718
AccII	CGCG	2 cut(s)	980, 2919
AccIII	TCCGGA	1 cut(s)	1555
AciI	CCGC	8 cut(s)	980, 1112, 1830, 2358, 2513, 2547, 2550, 2769
AclWI	GGATC	6 cut(s)	342, 507, 726, 1174, 2443, 2777
AcoI	YGGCCR	3 cut(s)	1051, 2690, 2793
AcvI	CACGTG	1 cut(s)	2509
AcyI	GRCGYC	4 cut(s)	2463, 2686, 2715, 2766
AdeI	CACNNNGTG	1 cut(s)	1454
AfaI	GTAC	7 cut(s)	494, 566, 1509, 2306, 2387, 2615, 2853
AfiI	CCNNNNNNNGG	7 cut(s)	542, 1049, 1490, 1562, 1775, 1776, 2224
AflIII	ACRYGT	2 cut(s)	1665, 2506
AgeI	ACCGGT	1 cut(s)	1100
AhdI	GACNNNNNGTC	1 cut(s)	2751
AhlI	ACTAGT	1 cut(s)	550
AjiI	CACGTC	1 cut(s)	2047
AjnI	CCWGG	2 cut(s)	604, 1002
AjuI	GAANNNNNNNTTGG	2 cut(s)	1108, 1140
AloI	GAACNNNNNNTCC	2 cut(s)	1595, 1627
Alw26I	GTCTC	4 cut(s)	156, 239, 628, 2454
AlwI	GGATC	6 cut(s)	342, 507, 726, 1174, 2443, 2777
Ama87I	CYCGRG	4 cut(s)	503, 1468, 1540, 1890
Aor13HI	TCCGGA	1 cut(s)	1555
AoxI	GGCC	9 cut(s)	265, 1051, 1366, 1492, 1968, 1990, 2690, 2793, 2873
ApaI	GGGCCC	1 cut(s)	1994
ApeKI	GCWGC	8 cut(s)	339, 1066, 1069, 1072, 1949, 1952, 1955, 2405
AsiGI	ACCGGT	1 cut(s)	1100
Asp700I	GAANNNNTTC	2 cut(s)	1022, 2892
AspLEI	GCGC	2 cut(s)	2602, 2921
AspS9I	GGNCC	5 cut(s)	1175, 1400, 1472, 1990, 1991
AsuC2I	CCSGG	2 cut(s)	1777, 1881
AsuHPI	GGTGA	9 cut(s)	608, 712, 899, 1018, 1090, 1556, 1852, 2447, 2711
AsuII	TTCGAA	2 cut(s)	666, 2499
AvaI	CYCGRG	4 cut(s)	503, 1468, 1540, 1890
AvaII	GGWCC	3 cut(s)	1175, 1400, 1472
BaeGI	GKGCMC	2 cut(s)	1994, 2808
BalI	TGGCCA	1 cut(s)	2795
BanI	GGYRCC	2 cut(s)	7, 1319
BanII	GRGCYC	2 cut(s)	1994, 2526
BbrPI	CACGTG	1 cut(s)	2509
BbvI	GCAGC	8 cut(s)	351, 1053, 1059, 1081, 1936, 1939, 1967, 2392
BccI	CCATC	8 cut(s)	904, 1492, 1509, 1584, 1633, 1830, 2060, 2978
BceAI	ACGGC	2 cut(s)	559, 2560
BcgI	CGANNNNNNTGC	2 cut(s)	2173, 2207
BciT130I	CCWGG	2 cut(s)	606, 1004
BciVI	GTATCC	1 cut(s)	1137
BcnI	CCSGG	2 cut(s)	1777, 1881
BcoDI	GTCTC	4 cut(s)	156, 239, 628, 2454
BcuI	ACTAGT	1 cut(s)	550
BfaI	CTAG	7 cut(s)	41, 195, 293, 551, 1215, 1940, 2171
BfmI	CTRYAG	3 cut(s)	1067, 1488, 1953
BfuI	GTATCC	1 cut(s)	1137
BmcAI	AGTACT	2 cut(s)	566, 1509
Bme1390I	CCNGG	4 cut(s)	606, 1004, 1777, 1881
Bme18I	GGWCC	3 cut(s)	1175, 1400, 1472
BmeRI	GACNNNNNGTC	1 cut(s)	2751
BmeT110I	CYCGRG	4 cut(s)	503, 1468, 1540, 1890
BmgBI	CACGTC	1 cut(s)	2047
BmgT120I	GGNCC	5 cut(s)	1175, 1400, 1472, 1990, 1991
BmiI	GGNNCC	6 cut(s)	9, 46, 1321, 1473, 1834, 1992
BmrFI	CCNGG	4 cut(s)	606, 1004, 1777, 1881
BmrI	ACTGGG	3 cut(s)	1235, 2234, 2554
BmsI	GCATC	2 cut(s)	179, 2564
BmuI	ACTGGG	3 cut(s)	1235, 2234, 2554
BoxI	GACNNNNGTC	2 cut(s)	1217, 1596
BpmI	CTGGAG	1 cut(s)	385
Bpu10I	CCTNAGC	2 cut(s)	488, 1139
Bpu14I	TTCGAA	2 cut(s)	666, 2499
BpuEI	CTTGAG	3 cut(s)	83, 908, 2389
BpuMI	CCSGG	2 cut(s)	1777, 1881
BsaAI	YACGTR	1 cut(s)	2509
BsaBI	GATNNNNATC	1 cut(s)	1308
BsaHI	GRCGYC	4 cut(s)	2463, 2686, 2715, 2766
BsaJI	CCNNGG	8 cut(s)	824, 1002, 1003, 1704, 1889, 2107, 2197, 2786
BsaWI	WCCGGW	3 cut(s)	1100, 1397, 1555
BsaXI	ACNNNNNCTCC	6 cut(s)	554, 584, 1595, 1625, 2423, 2453
Bsc4I	CCNNNNNNNGG	7 cut(s)	542, 1049, 1490, 1562, 1775, 1776, 2224
Bse118I	RCCGGY	4 cut(s)	273, 1028, 1100, 2692
Bse1I	ACTGG	6 cut(s)	370, 395, 889, 1230, 2229, 2560
Bse3DI	GCAATG	7 cut(s)	405, 589, 2333, 2595, 2826, 2835, 2847
Bse8I	GATNNNNATC	1 cut(s)	1308
BseAI	TCCGGA	1 cut(s)	1555
BseBI	CCWGG	2 cut(s)	606, 1004
BseDI	CCNNGG	8 cut(s)	824, 1002, 1003, 1704, 1889, 2107, 2197, 2786
BseGI	GGATG	5 cut(s)	896, 1020, 1127, 1625, 2555
BseJI	GATNNNNATC	1 cut(s)	1308
BseLI	CCNNNNNNNGG	7 cut(s)	542, 1049, 1490, 1562, 1775, 1776, 2224
BseMI	GCAATG	7 cut(s)	405, 589, 2333, 2595, 2826, 2835, 2847
BseMII	CTCAG	6 cut(s)	502, 623, 825, 1465, 2595, 2612
BseNI	ACTGG	6 cut(s)	370, 395, 889, 1230, 2229, 2560
BseRI	GAGGAG	4 cut(s)	2100, 2103, 2926, 2929
BseSI	GKGCMC	2 cut(s)	1994, 2808
BseX3I	CGGCCG	1 cut(s)	2690
BseXI	GCAGC	8 cut(s)	351, 1053, 1059, 1081, 1936, 1939, 1967, 2392
BseYI	CCCAGC	2 cut(s)	174, 1811
Bsh1236I	CGCG	2 cut(s)	980, 2919
Bsh1285I	CGRYCG	2 cut(s)	2693, 2697
BshFI	GGCC	9 cut(s)	267, 1053, 1368, 1494, 1970, 1992, 2692, 2795, 2875
BshNI	GGYRCC	2 cut(s)	7, 1319
BshTI	ACCGGT	1 cut(s)	1100
BsiEI	CGRYCG	2 cut(s)	2693, 2697
BsiHKCI	CYCGRG	4 cut(s)	503, 1468, 1540, 1890
BslFI	GGGAC	3 cut(s)	515, 760, 1210
BslI	CCNNNNNNNGG	7 cut(s)	542, 1049, 1490, 1562, 1775, 1776, 2224
BsmAI	GTCTC	4 cut(s)	156, 239, 628, 2454
BsmBI	CGTCTC	2 cut(s)	156, 2454
BsmFI	GGGAC	3 cut(s)	515, 760, 1210
BsmI	GAATGC	3 cut(s)	1251, 1339, 2060
BsnI	GGCC	9 cut(s)	267, 1053, 1368, 1494, 1970, 1992, 2692, 2795, 2875
BsoBI	CYCGRG	4 cut(s)	503, 1468, 1540, 1890
Bsp119I	TTCGAA	2 cut(s)	666, 2499
Bsp120I	GGGCCC	1 cut(s)	1990
Bsp1286I	GDGCHC	3 cut(s)	1994, 2526, 2808
Bsp13I	TCCGGA	1 cut(s)	1555
Bsp19I	CCATGG	1 cut(s)	2107
BspACI	CCGC	8 cut(s)	980, 1112, 1830, 2358, 2513, 2547, 2550, 2769
BspANI	GGCC	9 cut(s)	267, 1053, 1368, 1494, 1970, 1992, 2692, 2795, 2875
BspCNI	CTCAG	6 cut(s)	501, 624, 824, 1464, 2596, 2613
BspEI	TCCGGA	1 cut(s)	1555
BspFNI	CGCG	2 cut(s)	980, 2919
BspHI	TCATGA	2 cut(s)	754, 942
BspLI	GGNNCC	6 cut(s)	9, 46, 1321, 1473, 1834, 1992
BspMAI	CTGCAG	2 cut(s)	1071, 1957
BspPI	GGATC	6 cut(s)	342, 507, 726, 1174, 2443, 2777
BspQI	GCTCTTC	2 cut(s)	1712, 2630
BspT104I	TTCGAA	2 cut(s)	666, 2499
BspT107I	GGYRCC	2 cut(s)	7, 1319
BsrDI	GCAATG	7 cut(s)	405, 589, 2333, 2595, 2826, 2835, 2847
BsrFI	RCCGGY	4 cut(s)	273, 1028, 1100, 2692
BsrI	ACTGG	6 cut(s)	370, 395, 889, 1230, 2229, 2560
BssAI	RCCGGY	4 cut(s)	273, 1028, 1100, 2692
BssECI	CCNNGG	8 cut(s)	824, 1002, 1003, 1704, 1889, 2107, 2197, 2786
BssNAI	GTATAC	1 cut(s)	2647
BssNI	GRCGYC	4 cut(s)	2463, 2686, 2715, 2766
BssT1I	CCWWGG	4 cut(s)	824, 1704, 2107, 2786
Bst1107I	GTATAC	1 cut(s)	2647
Bst2UI	CCWGG	2 cut(s)	606, 1004
Bst4CI	ACNGT	4 cut(s)	596, 1571, 2651, 2864
Bst6I	CTCTTC	6 cut(s)	944, 1435, 1712, 2077, 2630, 2947
BstACI	GRCGYC	4 cut(s)	2463, 2686, 2715, 2766
BstBAI	YACGTR	1 cut(s)	2509
BstBI	TTCGAA	2 cut(s)	666, 2499
BstC8I	GCNNGC	7 cut(s)	1356, 1370, 1925, 2262, 2526, 2581, 2793
BstDEI	CTNAG	9 cut(s)	385, 488, 632, 811, 1139, 1451, 1523, 2604, 2621
BstDSI	CCRYGG	2 cut(s)	2107, 2197
BstF5I	GGATG	5 cut(s)	896, 1020, 1127, 1625, 2555
BstFNI	CGCG	2 cut(s)	980, 2919
BstHHI	GCGC	2 cut(s)	2602, 2921
BstMAI	GTCTC	4 cut(s)	156, 239, 628, 2454
BstMCI	CGRYCG	2 cut(s)	2693, 2697
BstMWI	GCNNNNNNNGC	6 cut(s)	793, 1072, 1955, 2402, 2510, 2589
BstNI	CCWGG	2 cut(s)	606, 1004
BstNSI	RCATGY	3 cut(s)	1669, 2342, 2569
BstPAI	GACNNNNGTC	2 cut(s)	1217, 1596
BstSCI	CCNGG	4 cut(s)	604, 1002, 1775, 1879
BstSFI	CTRYAG	3 cut(s)	1067, 1488, 1953
BstSLI	GKGCMC	2 cut(s)	1994, 2808
BstUI	CGCG	2 cut(s)	980, 2919
BstV1I	GCAGC	8 cut(s)	351, 1053, 1059, 1081, 1936, 1939, 1967, 2392
BstX2I	RGATCY	2 cut(s)	499, 718
BstXI	CCANNNNNNTGG	3 cut(s)	377, 1705, 2001
BstYI	RGATCY	2 cut(s)	499, 718
BstZ17I	GTATAC	1 cut(s)	2647
BstZI	CGGCCG	1 cut(s)	2690
BsuI	GTATCC	1 cut(s)	1137
BsuRI	GGCC	9 cut(s)	267, 1053, 1368, 1494, 1970, 1992, 2692, 2795, 2875
BtgI	CCRYGG	2 cut(s)	2107, 2197
BtrI	CACGTC	1 cut(s)	2047
BtsCI	GGATG	5 cut(s)	896, 1020, 1127, 1625, 2555
BtsI	GCAGTG	2 cut(s)	219, 2145
BtsIMutI	CAGTG	9 cut(s)	79, 219, 382, 1459, 2145, 2222, 2567, 2618, 2869
Cac8I	GCNNGC	7 cut(s)	1356, 1370, 1925, 2262, 2526, 2581, 2793
CciI	TCATGA	2 cut(s)	754, 942
CfoI	GCGC	2 cut(s)	2602, 2921
Cfr10I	RCCGGY	4 cut(s)	273, 1028, 1100, 2692
Cfr13I	GGNCC	5 cut(s)	1175, 1400, 1472, 1990, 1991
CseI	GACGC	3 cut(s)	2675, 2704, 2774
Csp6I	GTAC	7 cut(s)	493, 565, 1508, 2305, 2386, 2614, 2852
CspAI	ACCGGT	1 cut(s)	1100
CviQI	GTAC	7 cut(s)	493, 565, 1508, 2305, 2386, 2614, 2852
DdeI	CTNAG	9 cut(s)	385, 488, 632, 811, 1139, 1451, 1523, 2604, 2621
DraI	TTTAAA	1 cut(s)	3007
DraIII	CACNNNGTG	1 cut(s)	1454
DriI	GACNNNNNGTC	1 cut(s)	2751
EaeI	YGGCCR	3 cut(s)	1051, 2690, 2793
EagI	CGGCCG	1 cut(s)	2690
Eam1104I	CTCTTC	6 cut(s)	944, 1435, 1712, 2077, 2630, 2947
Eam1105I	GACNNNNNGTC	1 cut(s)	2751
EarI	CTCTTC	6 cut(s)	944, 1435, 1712, 2077, 2630, 2947
EciI	GGCGGA	2 cut(s)	2528, 2565
EclXI	CGGCCG	1 cut(s)	2690
Eco130I	CCWWGG	4 cut(s)	824, 1704, 2107, 2786
Eco147I	AGGCCT	1 cut(s)	267
Eco24I	GRGCYC	2 cut(s)	1994, 2526
Eco47I	GGWCC	3 cut(s)	1175, 1400, 1472
Eco52I	CGGCCG	1 cut(s)	2690
Eco72I	CACGTG	1 cut(s)	2509
Eco88I	CYCGRG	4 cut(s)	503, 1468, 1540, 1890
EcoO109I	RGGNCCY	1 cut(s)	1990
EcoRI	GAATTC	4 cut(s)	142, 183, 1531, 2030
EcoRII	CCWGG	2 cut(s)	604, 1002
EcoT14I	CCWWGG	4 cut(s)	824, 1704, 2107, 2786
EcoT38I	GRGCYC	2 cut(s)	1994, 2526
ErhI	CCWWGG	4 cut(s)	824, 1704, 2107, 2786
Esp3I	CGTCTC	2 cut(s)	156, 2454
FalI	AAGNNNNNCTT	4 cut(s)	92, 124, 1895, 1927
FaqI	GGGAC	3 cut(s)	515, 760, 1210
FauI	CCCGC	2 cut(s)	1119, 2351
FauNDI	CATATG	1 cut(s)	1931
FblI	GTMKAC	3 cut(s)	2193, 2646, 2718
FokI	GGATG	5 cut(s)	883, 1027, 1114, 1612, 2542
FriOI	GRGCYC	2 cut(s)	1994, 2526
FspBI	CTAG	7 cut(s)	41, 195, 293, 551, 1215, 1940, 2171
GlaI	GCGC	2 cut(s)	2601, 2920
GsaI	CCCAGC	2 cut(s)	178, 1815
GsuI	CTGGAG	1 cut(s)	385
HaeIII	GGCC	9 cut(s)	267, 1053, 1368, 1494, 1970, 1992, 2692, 2795, 2875
HgaI	GACGC	3 cut(s)	2675, 2704, 2774
HhaI	GCGC	2 cut(s)	2602, 2921
Hin1I	GRCGYC	4 cut(s)	2463, 2686, 2715, 2766
Hin6I	GCGC	2 cut(s)	2600, 2919
HinP1I	GCGC	2 cut(s)	2600, 2919
HincII	GTYRAC	3 cut(s)	2194, 2344, 2719
HindII	GTYRAC	3 cut(s)	2194, 2344, 2719
HindIII	AAGCTT	2 cut(s)	2147, 2320
HinfI	GANTC	9 cut(s)	676, 703, 1218, 1597, 1772, 1816, 1997, 2202, 2933
HphI	GGTGA	9 cut(s)	608, 712, 899, 1018, 1090, 1556, 1852, 2447, 2711
Hpy99I	CGWCG	5 cut(s)	980, 2546, 2645, 2691, 2720
HpyAV	CCTTC	7 cut(s)	662, 1753, 1798, 1960, 2017, 2462, 2705
HpyCH4III	ACNGT	4 cut(s)	596, 1571, 2651, 2864
HpyCH4IV	ACGT	5 cut(s)	975, 2046, 2463, 2508, 2643
HpyF10VI	GCNNNNNNNGC	6 cut(s)	793, 1072, 1955, 2402, 2510, 2589
HpyF3I	CTNAG	9 cut(s)	385, 488, 632, 811, 1139, 1451, 1523, 2604, 2621
HpySE526I	ACGT	5 cut(s)	975, 2046, 2463, 2508, 2643
Hsp92I	GRCGYC	4 cut(s)	2463, 2686, 2715, 2766
HspAI	GCGC	2 cut(s)	2600, 2919
Kpn2I	TCCGGA	1 cut(s)	1555
LguI	GCTCTTC	2 cut(s)	1712, 2630
LmnI	GCTCC	6 cut(s)	457, 1940, 2090, 2179, 2444, 2552
Lsp1109I	GCAGC	8 cut(s)	351, 1053, 1059, 1081, 1936, 1939, 1967, 2392
LweI	GCATC	2 cut(s)	179, 2564
MaeI	CTAG	7 cut(s)	41, 195, 293, 551, 1215, 1940, 2171
MaeII	ACGT	5 cut(s)	975, 2046, 2463, 2508, 2643
MaeIII	GTNAC	2 cut(s)	570, 2743
MfeI	CAATTG	3 cut(s)	2397, 2574, 2749
MflI	RGATCY	2 cut(s)	499, 718
MhlI	GDGCHC	3 cut(s)	1994, 2526, 2808
MlsI	TGGCCA	1 cut(s)	2795
MluNI	TGGCCA	1 cut(s)	2795
MlyI	GAGTC	3 cut(s)	1227, 1606, 2927
Mox20I	TGGCCA	1 cut(s)	2795
MroI	TCCGGA	1 cut(s)	1555
MroXI	GAANNNNTTC	2 cut(s)	1022, 2892
MscI	TGGCCA	1 cut(s)	2795
MseI	TTAA	9 cut(s)	131, 591, 933, 1157, 1265, 1374, 2948, 3006, 3025
MslI	CAYNNNNRTG	4 cut(s)	1664, 2560, 2801, 2840
Msp20I	TGGCCA	1 cut(s)	2795
MspA1I	CMGCKG	2 cut(s)	174, 1072
MspR9I	CCNGG	4 cut(s)	606, 1004, 1777, 1881
MunI	CAATTG	3 cut(s)	2397, 2574, 2749
Mva1269I	GAATGC	3 cut(s)	1251, 1339, 2060
MvaI	CCWGG	2 cut(s)	606, 1004
MvnI	CGCG	2 cut(s)	980, 2919
MwoI	GCNNNNNNNGC	6 cut(s)	793, 1072, 1955, 2402, 2510, 2589
NciI	CCSGG	2 cut(s)	1777, 1881
NcoI	CCATGG	1 cut(s)	2107
NdeI	CATATG	1 cut(s)	1931
NlaIV	GGNNCC	6 cut(s)	9, 46, 1321, 1473, 1834, 1992
NmeAIII	GCCGAG	1 cut(s)	1029
NmuCI	GTSAC	2 cut(s)	570, 2743
NspI	RCATGY	3 cut(s)	1669, 2342, 2569
NspV	TTCGAA	2 cut(s)	666, 2499
PagI	TCATGA	2 cut(s)	754, 942
PasI	CCCWGGG	1 cut(s)	1003
PceI	AGGCCT	1 cut(s)	267
PciI	ACATGT	1 cut(s)	1665
PciSI	GCTCTTC	2 cut(s)	1712, 2630
PcsI	WCGNNNNNNNCGW	2 cut(s)	2505, 2637
PctI	GAATGC	3 cut(s)	1251, 1339, 2060
PdmI	GAANNNNTTC	2 cut(s)	1022, 2892
PfeI	GAWTC	6 cut(s)	676, 703, 1772, 1816, 1997, 2202
PflFI	GACNNNGTC	2 cut(s)	974, 2723
PflMI	CCANNNNNTGG	1 cut(s)	2224
PinAI	ACCGGT	1 cut(s)	1100
PleI	GAGTC	3 cut(s)	1226, 1605, 2927
PmaCI	CACGTG	1 cut(s)	2509
PmlI	CACGTG	1 cut(s)	2509
PpsI	GAGTC	3 cut(s)	1226, 1605, 2927
Ppu21I	YACGTR	1 cut(s)	2509
PscI	ACATGT	1 cut(s)	1665
PshAI	GACNNNNGTC	2 cut(s)	1217, 1596
Psp6I	CCWGG	2 cut(s)	604, 1002
PspCI	CACGTG	1 cut(s)	2509
PspFI	CCCAGC	2 cut(s)	174, 1811
PspGI	CCWGG	2 cut(s)	604, 1002
PspN4I	GGNNCC	6 cut(s)	9, 46, 1321, 1473, 1834, 1992
PspOMI	GGGCCC	1 cut(s)	1990
PspPI	GGNCC	5 cut(s)	1175, 1400, 1472, 1990, 1991
PstI	CTGCAG	2 cut(s)	1071, 1957
PsuI	RGATCY	2 cut(s)	499, 718
PsyI	GACNNNGTC	2 cut(s)	974, 2723
PvuII	CAGCTG	2 cut(s)	174, 1072
RsaI	GTAC	7 cut(s)	494, 566, 1509, 2306, 2387, 2615, 2853
RsaNI	GTAC	7 cut(s)	493, 565, 1508, 2305, 2386, 2614, 2852
RseI	CAYNNNNRTG	4 cut(s)	1664, 2560, 2801, 2840
SalI	GTCGAC	2 cut(s)	2192, 2717
SapI	GCTCTTC	2 cut(s)	1712, 2630
SaqAI	TTAA	9 cut(s)	131, 591, 933, 1157, 1265, 1374, 2948, 3006, 3025
Sau96I	GGNCC	5 cut(s)	1175, 1400, 1472, 1990, 1991
ScaI	AGTACT	2 cut(s)	566, 1509
SchI	GAGTC	3 cut(s)	1227, 1606, 2927
ScrFI	CCNGG	4 cut(s)	606, 1004, 1777, 1881
SduI	GDGCHC	3 cut(s)	1994, 2526, 2808
SfaNI	GCATC	2 cut(s)	179, 2564
SfcI	CTRYAG	3 cut(s)	1067, 1488, 1953
SfuI	TTCGAA	2 cut(s)	666, 2499
SinI	GGWCC	3 cut(s)	1175, 1400, 1472
SmiMI	CAYNNNNRTG	4 cut(s)	1664, 2560, 2801, 2840
SmlI	CTYRAG	3 cut(s)	98, 923, 2368
SmoI	CTYRAG	3 cut(s)	98, 923, 2368
SpeI	ACTAGT	1 cut(s)	550
SseBI	AGGCCT	1 cut(s)	267
SsiI	CCGC	8 cut(s)	980, 1112, 1830, 2358, 2513, 2547, 2550, 2769
SspI	AATATT	1 cut(s)	2479
SspMI	CTAG	7 cut(s)	41, 195, 293, 551, 1215, 1940, 2171
StuI	AGGCCT	1 cut(s)	267
StyD4I	CCNGG	4 cut(s)	604, 1002, 1775, 1879
StyI	CCWWGG	4 cut(s)	824, 1704, 2107, 2786
TaaI	ACNGT	4 cut(s)	596, 1571, 2651, 2864
TaiI	ACGT	5 cut(s)	978, 2049, 2466, 2511, 2646
TaqII	GACCGA	1 cut(s)	1192
TatI	WGTACW	3 cut(s)	564, 1507, 2304
TauI	GCSGC	2 cut(s)	2550, 2771
TfiI	GAWTC	6 cut(s)	676, 703, 1772, 1816, 1997, 2202
Tru1I	TTAA	9 cut(s)	131, 591, 933, 1157, 1265, 1374, 2948, 3006, 3025
Tru9I	TTAA	9 cut(s)	131, 591, 933, 1157, 1265, 1374, 2948, 3006, 3025
TscAI	CASTG	9 cut(s)	79, 219, 382, 1459, 2145, 2229, 2567, 2625, 2869
TseFI	GTSAC	2 cut(s)	570, 2743
TseI	GCWGC	8 cut(s)	339, 1066, 1069, 1072, 1949, 1952, 1955, 2405
Tsp45I	GTSAC	2 cut(s)	570, 2743
TspGWI	ACGGA	2 cut(s)	756, 2214
TspRI	CASTG	9 cut(s)	79, 219, 382, 1459, 2145, 2229, 2567, 2625, 2869
Tth111I	GACNNNGTC	2 cut(s)	974, 2723
Van91I	CCANNNNNTGG	1 cut(s)	2224
VpaK11BI	GGWCC	3 cut(s)	1175, 1400, 1472
XbaI	TCTAGA	1 cut(s)	194
XceI	RCATGY	3 cut(s)	1669, 2342, 2569
XmiI	GTMKAC	3 cut(s)	2193, 2646, 2718
XmnI	GAANNNNTTC	2 cut(s)	1022, 2892
XspI	CTAG	7 cut(s)	41, 195, 293, 551, 1215, 1940, 2171
ZraI	GACGTC	1 cut(s)	2464
ZrmI	AGTACT	2 cut(s)	566, 1509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.