Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000240.1

Orthogroup ID

OG0011551

Physical Location & Seq

Genomic Coordinates Reverse (-)

143687 .. 151131

Gene Structure 7445 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

atggagaggcgcagcaaaagaaaacggaaaccggaatccgacgccgccgtcagtgaagacaccaccgccttcgccgtcttactctccgccctctcctctcaaaaccccgactcccaccgccccttactcaccaaatgcctcaacaaactccgccgctccttccacaaccccctcctctctctcctccccactctcctcacccgcacctccgcttccctcgcctcccgcgccgccgacatggtgggctccgccgccctcgagtccctcgacatgaaccgcaccatcgcttccgacgctgacatcatccatgccttgctctccaggtcctccgtctccgcctgcaatgctcttctcgatttgtgcactacttggttcggacgacgccgtttgatcgagttctctgctcttccgacgattctatttcggtttcttcgggttcgtaaatattcaacaatttcagttactgtgtgctctgcctctggggatagcaaagatgtaaactctgttagtgtaggatttaagatggatgaagtttctgtgttgattctcaatgctgcaattattctcatcaatacctgtgacattgagcaattggagaaaatcccgggacacctatcgcaagctttctttgcatttttgaggaatctgtgggcgaatgtgcgaaatgcaatgtcactcgcaagccctttggattctacaccagggggagacttgtatattagcaacattagagttggtcatgtggccgaaagcctgttcaggctttccatttgtgcgtcttggctcgtcacgcctttgccttttcgtgtggttgagaaaggtgtatttggtttcactgagtcgggttttagaggttttatgtctagccactgggaggtatcaccatttcttgtgaggaggctgtcagctggggtgaaaattgaggaggatgattttttcggcccattatcagtgaatttggtgggagcatatccttcttttctttcatcaatccttccagggatggtttcttgtcttcctatttcttcagacgagttaaacatccttgcatttctggaagaggcgcggagcaaattgggttgtcccctaatttaccagcaggacattcgggttgttaaaacgaaaagcaagaaggaggtgcatttctttgtggacagtctggcatcttgctgcataaaggatcctcattgtcttagtgccgaggatgtttcaaaatgcgaagaagcatataaagacggttatacagttgcgttacgcggaatggagttccggtttgacagtgttgctgctattgcagaaggattagcatctgtttttggtcaaccatctttaggtgctaatatgtacttgacaccaccaaattctcagggcttggcttgtcactatgatgaccactgtgtgtttgtatgccaacttgttgggactaagaaatggagagtttcttctcagtcaaatgttcagttacctcgattgtatgaccctcttgataaactacacggttcagaagttcagaattcaatgggtgactgcaaacaatatttgcttagggaaggtgatattttgtatatccccagaggtgttcttcatgaggcatgcactgagaatgttagtcttgatgggtctgctagctgttccttacacattacacttggtatcgaggttgaacctcctttcgagtgggaaggatttgttcatgttgcattcttcagttggtaccagaagcaaaaacaagttaccaattcttttgagtcttcatctggaaccattcatgatatatctgcgaatctcttccatgttgccattgggttgataggtgattctgatcctacctttaggaaggcttgcttggttgcttcaatcttttccagttcacatacaaataactggcttgatttaaaccagagaatcatcttctctcagctgattgataaaattattactcagacaaggttcttggaaatgttcaggagcatagaattagcagtccaggaaaacaaggattccttgcaacgaattaaatggcttggttttctcaatctggataaggaaagcagtctaaatcatgaccagaatatgcctttcatggggatgaaaaatttattgtcattatgtattcaacacaaagacaatgtagaagctgcattccagcagcttaaatctaggttctgtgaaaacgtgatattcgaggatgcaatagttagccaccacctccatcaagtctccaccgccattagagacgatctcaaccttcatgggtccccgagaagcccattacggccattgaagttgaacaaaaggtcggcgagttggtcagagtcatggctcaagaacactacttcactcaagaatgtgatcaaggctatgcaactaggcttgcccaaagagtcaagattgaagcccacccagaaaaccctaaaccctaatttggaaatttctgaccggacgacccaattgtccgatcaaatcctcctcgaaattctggccaagctgccggagccggatcggaagccgagctggctagtctgcaagcggtggatgagcctccagggctggcttgtgaggtccgtgaaggtgaaagactggagctttgtggaattgggtcgggttatttcaaggtttccgatcttgacccaggttgatctggtactcggttcactgatctcggatcggaattccgggattttgcttaatcatggtgggtttttggtgccggttgcttgttccggtcaccaggttttcgaagctgattgtgatttggttcctggtgaggttgtggatagagggcttagtgagttagggagtcggtgccccaatttgaagaagctagttgtgattggggctagtgagttagtagggtggctaagtatagcagaagagtgtccaactcttcaagagttggagttgcacaagtgcaatgacaatttgctgagagggattacagcctgtgagaatgtgcaagtgttgaagttggtggccaatgtggaggggctatgtggttctgtgacaccggaatccggacaccagttcagtaggcggattcgagattccggtgaccaatcgctgaattccagtcaccggagtcggcggcgggccactggtcaccggagtctggcaaggtatccgacgacttctctctctaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009507 GO:0009536 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016491 GO:0016569 GO:0016570 GO:0016577 GO:0016705 GO:0016706 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032451 GO:0032452 GO:0032453 GO:0034720 GO:0036211 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051213 GO:0051252 GO:0051253 GO:0051276 GO:0051864 GO:0055114 GO:0060255 GO:0065007 GO:0070076 GO:0070544 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_4

Protein Analysis

1047

Amino Acids

116.44

Weight (kDa)

8.01

Isoelectric Point (pI)

53.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC_2	PF08007	422 - 543	6.3e-21	JmjC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011551)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530 FvH4_4g06530
malus_domestica	MD13G1236300.v1.1
prunus_persica	Prupe.1G068100_v2.0.a1 Prupe.1G068100_v2.0.a1
pyrus_communis	pycom13g20910
rosa_chinensis	RchiOBHm_Chr4g0398451
rosa_laevigata	RLG00000009361
rosa_multiflora	Rmu_ssc0000240.1_g000034
rosa_roxburghii	Rroxscaffold_5G00343410
rosa_rugosa	Rorug04G0008000 Rorug04G0008100
rosa_samantha	Rh4AG086200 Rh4BG083100 Rh4CG094000 Rh4DG077900
rosa_wichuraiana	Rw4G007210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	47, 2452
Acc65I	GGTACC	1 cut(s)	1713
AccB1I	GGYRCC	3 cut(s)	1713, 2707, 2805
AccBSI	CCGCTC	1 cut(s)	156
AccII	CGCG	3 cut(s)	228, 1066, 1257
AccIII	TCCGGA	1 cut(s)	3014
AclWI	GGATC	5 cut(s)	1175, 1188, 1817, 2508, 2673
AcoI	YGGCCR	4 cut(s)	744, 2276, 2481, 2973
AcsI	RAATTY	8 cut(s)	955, 1360, 1513, 2095, 2430, 2475, 2671, 3064
AcuI	CTGAAG	2 cut(s)	1011, 1690
AcyI	GRCGYC	2 cut(s)	42, 382
AdeI	CACNNNGTG	1 cut(s)	1399
AfaI	GTAC	3 cut(s)	1346, 1715, 2646
AfiI	CCNNNNNNNGG	7 cut(s)	874, 1331, 2084, 2425, 3014, 3075, 3109
AjnI	CCWGG	8 cut(s)	320, 700, 997, 1986, 2544, 2631, 2730, 2761
AjuI	GAANNNNNNNTTGG	2 cut(s)	1829, 1861
Alw21I	GWGCWC	2 cut(s)	365, 473
Alw26I	GTCTC	4 cut(s)	337, 702, 2224, 2229
Alw44I	GTGCAC	1 cut(s)	361
AlwI	GGATC	5 cut(s)	1175, 1188, 1817, 2508, 2673
AlwNI	CAGNNNCTG	1 cut(s)	464
Ama87I	CYCGRG	3 cut(s)	257, 604, 2260
Aor13HI	TCCGGA	1 cut(s)	3014
AoxI	GGCC	6 cut(s)	744, 940, 2276, 2481, 2973, 3090
ApaLI	GTGCAC	1 cut(s)	361
ApeKI	GCWGC	7 cut(s)	12, 554, 1170, 1286, 2138, 2149, 2488
ApoI	RAATTY	8 cut(s)	955, 1360, 1513, 2095, 2430, 2475, 2671, 3064
ArsI	GACNNNNNNTTYG	2 cut(s)	2570, 2602
Asp700I	GAANNNNTTC	1 cut(s)	1787
Asp718I	GGTACC	1 cut(s)	1713
AspLEI	GCGC	3 cut(s)	12, 230, 1066
AspS9I	GGNCC	5 cut(s)	324, 941, 2256, 2562, 3090
AsuC2I	CCSGG	3 cut(s)	605, 606, 2677
AsuII	TTCGAA	1 cut(s)	2739
AsuNHI	GCTAGC	1 cut(s)	1625
AvaI	CYCGRG	3 cut(s)	257, 604, 2260
AvaII	GGWCC	3 cut(s)	324, 2256, 2562
BaeGI	GKGCMC	2 cut(s)	365, 2810
BalI	TGGCCA	2 cut(s)	2483, 2975
BamHI	GGATCC	1 cut(s)	1180
BanI	GGYRCC	3 cut(s)	1713, 2707, 2805
BanII	GRGCYC	1 cut(s)	248
BbsI	GAAGAC	3 cut(s)	63, 1007, 1743
Bbv12I	GWGCWC	2 cut(s)	365, 473
BbvI	GCAGC	7 cut(s)	24, 541, 1157, 1273, 2125, 2161, 2475
BccI	CCATC	6 cut(s)	290, 517, 997, 1333, 1610, 2220
BceAI	ACGGC	4 cut(s)	32, 59, 369, 2291
BcgI	CGANNNNNNTGC	4 cut(s)	383, 417, 1088, 1122
BciT130I	CCWGG	8 cut(s)	322, 702, 999, 1988, 2546, 2633, 2732, 2763
BciVI	GTATCC	1 cut(s)	3129
BclI	TGATCA	1 cut(s)	2352
BcnI	CCSGG	3 cut(s)	605, 606, 2677
BcoDI	GTCTC	4 cut(s)	337, 702, 2224, 2229
BfaI	CTAG	7 cut(s)	864, 1626, 2160, 2369, 2519, 2825, 2841
BfuI	GTATCC	1 cut(s)	3129
BglI	GCCNNNNNGGC	2 cut(s)	2515, 2547
Bme18I	GGWCC	3 cut(s)	324, 2256, 2562
BmeT110I	CYCGRG	3 cut(s)	257, 604, 2260
BmgT120I	GGNCC	5 cut(s)	324, 941, 2256, 2562, 3090
BmrI	ACTGGG	1 cut(s)	880
BmsI	GCATC	3 cut(s)	1172, 1316, 2179
BmtI	GCTAGC	1 cut(s)	1629
BmuI	ACTGGG	1 cut(s)	880
BpiI	GAAGAC	3 cut(s)	63, 1007, 1743
BplI	GAGNNNNNCTC	2 cut(s)	2226, 2258
BpmI	CTGGAG	3 cut(s)	304, 2528, 2602
Bpu10I	CCTNAGC	1 cut(s)	1544
Bpu14I	TTCGAA	1 cut(s)	2739
BpuEI	CTTGAG	2 cut(s)	2309, 2327
BpuMI	CCSGG	3 cut(s)	605, 606, 2677
BsaBI	GATNNNNATC	2 cut(s)	1306, 1821
BsaHI	GRCGYC	2 cut(s)	42, 382
BsaJI	CCNNGG	6 cut(s)	604, 701, 998, 1200, 2545, 2631
BsaWI	WCCGGW	9 cut(s)	31, 1269, 2439, 2723, 3007, 3014, 3047, 3075, 3102
BsaXI	ACNNNNNCTCC	4 cut(s)	95, 125, 1256, 1286
Bsc4I	CCNNNNNNNGG	7 cut(s)	874, 1331, 2084, 2425, 3014, 3075, 3109
Bse118I	RCCGGY	1 cut(s)	2710
Bse1I	ACTGG	7 cut(s)	875, 1866, 1889, 2585, 3022, 3069, 3100
Bse3DI	GCAATG	3 cut(s)	349, 675, 2920
Bse8I	GATNNNNATC	2 cut(s)	1306, 1821
BseAI	TCCGGA	1 cut(s)	3014
BseBI	CCWGG	8 cut(s)	322, 702, 999, 1988, 2546, 2633, 2732, 2763
BseDI	CCNNGG	6 cut(s)	604, 701, 998, 1200, 2545, 2631
BseGI	GGATG	9 cut(s)	303, 532, 934, 1008, 1041, 1210, 2094, 2194, 2541
BseJI	GATNNNNATC	2 cut(s)	1306, 1821
BseLI	CCNNNNNNNGG	7 cut(s)	874, 1331, 2084, 2425, 3014, 3075, 3109
BseMI	GCAATG	3 cut(s)	349, 675, 2920
BseMII	CTCAG	7 cut(s)	828, 1379, 1460, 1590, 1931, 1955, 2918
BseNI	ACTGG	7 cut(s)	875, 1866, 1889, 2585, 3022, 3069, 3100
BseRI	GAGGAG	7 cut(s)	85, 164, 173, 185, 910, 938, 2459
BseSI	GKGCMC	2 cut(s)	365, 2810
BseXI	GCAGC	7 cut(s)	24, 541, 1157, 1273, 2125, 2161, 2475
BseYI	CCCAGC	1 cut(s)	908
Bsh1236I	CGCG	3 cut(s)	228, 1066, 1257
BshFI	GGCC	6 cut(s)	746, 942, 2278, 2483, 2975, 3092
BshNI	GGYRCC	3 cut(s)	1713, 2707, 2805
BsiHKAI	GWGCWC	2 cut(s)	365, 473
BsiHKCI	CYCGRG	3 cut(s)	257, 604, 2260
BslFI	GGGAC	5 cut(s)	247, 621, 1068, 1435, 2242
BslI	CCNNNNNNNGG	7 cut(s)	874, 1331, 2084, 2425, 3014, 3075, 3109
BsmAI	GTCTC	4 cut(s)	337, 702, 2224, 2229
BsmBI	CGTCTC	2 cut(s)	337, 2229
BsmFI	GGGAC	5 cut(s)	247, 621, 1068, 1435, 2242
BsmI	GAATGC	2 cut(s)	1700, 2141
BsnI	GGCC	6 cut(s)	746, 942, 2278, 2483, 2975, 3092
BsoBI	CYCGRG	3 cut(s)	257, 604, 2260
Bsp119I	TTCGAA	1 cut(s)	2739
Bsp1286I	GDGCHC	4 cut(s)	248, 365, 473, 2810
Bsp13I	TCCGGA	1 cut(s)	3014
BspANI	GGCC	6 cut(s)	746, 942, 2278, 2483, 2975, 3092
BspCNI	CTCAG	7 cut(s)	829, 1378, 1459, 1591, 1930, 1954, 2919
BspEI	TCCGGA	1 cut(s)	3014
BspFNI	CGCG	3 cut(s)	228, 1066, 1257
BspHI	TCATGA	3 cut(s)	1585, 1768, 2062
BspOI	GCTAGC	1 cut(s)	1629
BspPI	GGATC	5 cut(s)	1175, 1188, 1817, 2508, 2673
BspQI	GCTCTTC	2 cut(s)	354, 411
BspT104I	TTCGAA	1 cut(s)	2739
BspT107I	GGYRCC	3 cut(s)	1713, 2707, 2805
BsrBI	CCGCTC	1 cut(s)	156
BsrDI	GCAATG	3 cut(s)	349, 675, 2920
BsrFI	RCCGGY	1 cut(s)	2710
BsrI	ACTGG	7 cut(s)	875, 1866, 1889, 2585, 3022, 3069, 3100
BssAI	RCCGGY	1 cut(s)	2710
BssECI	CCNNGG	6 cut(s)	604, 701, 998, 1200, 2545, 2631
BssNI	GRCGYC	2 cut(s)	42, 382
Bst2UI	CCWGG	8 cut(s)	322, 702, 999, 1988, 2546, 2633, 2732, 2763
Bst4CI	ACNGT	7 cut(s)	466, 1157, 1238, 1246, 1280, 1397, 1499
Bst6I	CTCTTC	6 cut(s)	354, 411, 1053, 1793, 2868, 2892
BstACI	GRCGYC	2 cut(s)	42, 382
BstBI	TTCGAA	1 cut(s)	2739
BstEII	GGTNACC	3 cut(s)	2726, 3050, 3098
BstF5I	GGATG	9 cut(s)	303, 532, 934, 1008, 1041, 1210, 2094, 2194, 2541
BstFNI	CGCG	3 cut(s)	228, 1066, 1257
BstHHI	GCGC	3 cut(s)	12, 230, 1066
BstMAI	GTCTC	4 cut(s)	337, 702, 2224, 2229
BstNI	CCWGG	8 cut(s)	322, 702, 999, 1988, 2546, 2633, 2732, 2763
BstNSI	RCATGY	1 cut(s)	1596
BstPI	GGTNACC	3 cut(s)	2726, 3050, 3098
BstSLI	GKGCMC	2 cut(s)	365, 2810
BstUI	CGCG	3 cut(s)	228, 1066, 1257
BstV1I	GCAGC	7 cut(s)	24, 541, 1157, 1273, 2125, 2161, 2475
BstV2I	GAAGAC	3 cut(s)	63, 1007, 1743
BstX2I	RGATCY	1 cut(s)	1180
BstXI	CCANNNNNNTGG	1 cut(s)	1418
BstYI	RGATCY	1 cut(s)	1180
BsuI	GTATCC	1 cut(s)	3129
BsuRI	GGCC	6 cut(s)	746, 942, 2278, 2483, 2975, 3092
BtgZI	GCGATG	1 cut(s)	268
BtsCI	GGATG	9 cut(s)	303, 532, 934, 1008, 1041, 1210, 2094, 2194, 2541
BtsIMutI	CAGTG	9 cut(s)	58, 834, 868, 957, 1285, 1393, 1596, 2654, 3093
CaiI	CAGNNNCTG	1 cut(s)	464
CciI	TCATGA	3 cut(s)	1585, 1768, 2062
CfoI	GCGC	3 cut(s)	12, 230, 1066
Cfr10I	RCCGGY	1 cut(s)	2710
Cfr13I	GGNCC	5 cut(s)	324, 941, 2256, 2562, 3090
Cfr9I	CCCGGG	1 cut(s)	604
CseI	GACGC	4 cut(s)	50, 302, 390, 765
CsiI	ACCWGGT	1 cut(s)	2730
Csp6I	GTAC	3 cut(s)	1345, 1714, 2645
CviQI	GTAC	3 cut(s)	1345, 1714, 2645
DraI	TTTAAA	1 cut(s)	1896
DraIII	CACNNNGTG	1 cut(s)	1399
DrdI	GACNNNNNNGTC	2 cut(s)	47, 2452
DseDI	GACNNNNNNGTC	2 cut(s)	47, 2452
EaeI	YGGCCR	4 cut(s)	744, 2276, 2481, 2973
Eam1104I	CTCTTC	6 cut(s)	354, 411, 1053, 1793, 2868, 2892
EarI	CTCTTC	6 cut(s)	354, 411, 1053, 1793, 2868, 2892
EciI	GGCGGA	5 cut(s)	76, 140, 238, 325, 3049
Eco24I	GRGCYC	1 cut(s)	248
Eco47I	GGWCC	3 cut(s)	324, 2256, 2562
Eco57I	CTGAAG	2 cut(s)	1011, 1690
Eco88I	CYCGRG	3 cut(s)	257, 604, 2260
Eco91I	GGTNACC	3 cut(s)	2726, 3050, 3098
EcoO109I	RGGNCCY	2 cut(s)	324, 2256
EcoO65I	GGTNACC	3 cut(s)	2726, 3050, 3098
EcoRI	GAATTC	3 cut(s)	1513, 2671, 3064
EcoRII	CCWGG	8 cut(s)	320, 700, 997, 1986, 2544, 2631, 2730, 2761
EcoT38I	GRGCYC	1 cut(s)	248
Esp3I	CGTCTC	2 cut(s)	337, 2229
FalI	AAGNNNNNCTT	4 cut(s)	1829, 1861, 1988, 2020
FaqI	GGGAC	5 cut(s)	247, 621, 1068, 1435, 2242
FauI	CCCGC	3 cut(s)	209, 233, 3081
FbaI	TGATCA	1 cut(s)	2352
FokI	GGATG	9 cut(s)	290, 539, 941, 1015, 1028, 1217, 2101, 2201, 2548
FriOI	GRGCYC	1 cut(s)	248
FspBI	CTAG	7 cut(s)	864, 1626, 2160, 2369, 2519, 2825, 2841
GlaI	GCGC	3 cut(s)	11, 229, 1065
GsaI	CCCAGC	1 cut(s)	912
GsuI	CTGGAG	3 cut(s)	304, 2528, 2602
HaeIII	GGCC	6 cut(s)	746, 942, 2278, 2483, 2975, 3092
HgaI	GACGC	4 cut(s)	50, 302, 390, 765
HhaI	GCGC	3 cut(s)	12, 230, 1066
Hin1I	GRCGYC	2 cut(s)	42, 382
Hin6I	GCGC	3 cut(s)	10, 228, 1064
HinP1I	GCGC	3 cut(s)	10, 228, 1064
HincII	GTYRAC	1 cut(s)	1322
HindII	GTYRAC	1 cut(s)	1322
HindIII	AAGCTT	1 cut(s)	621
Hpy166II	GTNNAC	6 cut(s)	363, 499, 1153, 1322, 1871, 2654
Hpy8I	GTNNAC	6 cut(s)	363, 499, 1153, 1322, 1871, 2654
Hpy99I	CGWCG	5 cut(s)	44, 296, 384, 415, 3127
HpyCH4III	ACNGT	7 cut(s)	466, 1157, 1238, 1246, 1280, 1397, 1499
HpyCH4IV	ACGT	1 cut(s)	2175
HpySE526I	ACGT	1 cut(s)	2175
Hsp92I	GRCGYC	2 cut(s)	42, 382
HspAI	GCGC	3 cut(s)	10, 228, 1064
KflI	GGGWCCC	1 cut(s)	2256
Kpn2I	TCCGGA	1 cut(s)	3014
KpnI	GGTACC	1 cut(s)	1717
Ksp22I	TGATCA	1 cut(s)	2352
LguI	GCTCTTC	2 cut(s)	354, 411
LmnI	GCTCC	7 cut(s)	161, 251, 965, 1068, 1968, 2494, 2583
Lsp1109I	GCAGC	7 cut(s)	24, 541, 1157, 1273, 2125, 2161, 2475
LweI	GCATC	3 cut(s)	1172, 1316, 2179
MabI	ACCWGGT	1 cut(s)	2730
MaeI	CTAG	7 cut(s)	864, 1626, 2160, 2369, 2519, 2825, 2841
MaeII	ACGT	1 cut(s)	2175
MbiI	CCGCTC	1 cut(s)	156
MfeI	CAATTG	2 cut(s)	590, 2450
MflI	RGATCY	1 cut(s)	1180
MhlI	GDGCHC	4 cut(s)	248, 365, 473, 2810
MlsI	TGGCCA	2 cut(s)	2483, 2975
MluNI	TGGCCA	2 cut(s)	2483, 2975
MlyI	GAGTC	9 cut(s)	104, 269, 848, 1757, 2324, 2393, 2809, 3088, 3115
MmeI	TCCRAC	5 cut(s)	63, 315, 434, 2877, 2906
Mox20I	TGGCCA	2 cut(s)	2483, 2975
MroI	TCCGGA	1 cut(s)	3014
MroXI	GAANNNNTTC	1 cut(s)	1787
MscI	TGGCCA	2 cut(s)	2483, 2975
MseI	TTAA	7 cut(s)	519, 1037, 1116, 1895, 2016, 2154, 2688
MslI	CAYNNNNRTG	2 cut(s)	1386, 2087
Msp20I	TGGCCA	2 cut(s)	2483, 2975
MspA1I	CMGCKG	2 cut(s)	908, 1921
MunI	CAATTG	2 cut(s)	590, 2450
Mva1269I	GAATGC	2 cut(s)	1700, 2141
MvaI	CCWGG	8 cut(s)	322, 702, 999, 1988, 2546, 2633, 2732, 2763
MvnI	CGCG	3 cut(s)	228, 1066, 1257
NciI	CCSGG	3 cut(s)	605, 606, 2677
NheI	GCTAGC	1 cut(s)	1625
NmeAIII	GCCGAG	2 cut(s)	1225, 2535
NspI	RCATGY	1 cut(s)	1596
NspV	TTCGAA	1 cut(s)	2739
PaeI	GCATGC	1 cut(s)	1596
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	3 cut(s)	1585, 1768, 2062
PciSI	GCTCTTC	2 cut(s)	354, 411
PcsI	WCGNNNNNNNCGW	2 cut(s)	264, 2181
PctI	GAATGC	2 cut(s)	1700, 2141
PdmI	GAANNNNTTC	1 cut(s)	1787
PfoI	TCCNGGA	2 cut(s)	1986, 2675
PleI	GAGTC	9 cut(s)	104, 268, 847, 1756, 2323, 2392, 2808, 3087, 3114
PpsI	GAGTC	9 cut(s)	104, 268, 847, 1756, 2323, 2392, 2808, 3087, 3114
PpuMI	RGGWCCY	2 cut(s)	324, 2256
Psp5II	RGGWCCY	2 cut(s)	324, 2256
Psp6I	CCWGG	8 cut(s)	320, 700, 997, 1986, 2544, 2631, 2730, 2761
PspEI	GGTNACC	3 cut(s)	2726, 3050, 3098
PspFI	CCCAGC	1 cut(s)	908
PspGI	CCWGG	8 cut(s)	320, 700, 997, 1986, 2544, 2631, 2730, 2761
PspPI	GGNCC	5 cut(s)	324, 941, 2256, 2562, 3090
PspPPI	RGGWCCY	2 cut(s)	324, 2256
PspXI	VCTCGAGB	1 cut(s)	257
PstNI	CAGNNNCTG	1 cut(s)	464
PsuI	RGATCY	1 cut(s)	1180
PvuII	CAGCTG	2 cut(s)	908, 1921
RsaI	GTAC	3 cut(s)	1346, 1715, 2646
RsaNI	GTAC	3 cut(s)	1345, 1714, 2645
RseI	CAYNNNNRTG	2 cut(s)	1386, 2087
SapI	GCTCTTC	2 cut(s)	354, 411
SaqAI	TTAA	7 cut(s)	519, 1037, 1116, 1895, 2016, 2154, 2688
Sau96I	GGNCC	5 cut(s)	324, 941, 2256, 2562, 3090
SchI	GAGTC	9 cut(s)	104, 269, 848, 1757, 2324, 2393, 2809, 3088, 3115
SduI	GDGCHC	4 cut(s)	248, 365, 473, 2810
SexAI	ACCWGGT	1 cut(s)	2730
SfaNI	GCATC	3 cut(s)	1172, 1316, 2179
Sfr274I	CTCGAG	1 cut(s)	257
SfuI	TTCGAA	1 cut(s)	2739
SinI	GGWCC	3 cut(s)	324, 2256, 2562
SlaI	CTCGAG	1 cut(s)	257
SmaI	CCCGGG	1 cut(s)	606
SmiMI	CAYNNNNRTG	2 cut(s)	1386, 2087
SmlI	CTYRAG	3 cut(s)	257, 2324, 2342
SmoI	CTYRAG	3 cut(s)	257, 2324, 2342
SphI	GCATGC	1 cut(s)	1596
SspI	AATATT	2 cut(s)	446, 1538
SspMI	CTAG	7 cut(s)	864, 1626, 2160, 2369, 2519, 2825, 2841
TaaI	ACNGT	7 cut(s)	466, 1157, 1238, 1246, 1280, 1397, 1499
TaiI	ACGT	1 cut(s)	2178
TatI	WGTACW	1 cut(s)	1344
TauI	GCSGC	5 cut(s)	47, 156, 233, 254, 3088
Tru1I	TTAA	7 cut(s)	519, 1037, 1116, 1895, 2016, 2154, 2688
Tru9I	TTAA	7 cut(s)	519, 1037, 1116, 1895, 2016, 2154, 2688
TscAI	CASTG	9 cut(s)	58, 841, 875, 957, 1285, 1400, 1603, 2661, 3100
TseI	GCWGC	7 cut(s)	12, 554, 1170, 1286, 2138, 2149, 2488
TspGWI	ACGGA	3 cut(s)	40, 319, 2554
TspMI	CCCGGG	1 cut(s)	604
TspRI	CASTG	9 cut(s)	58, 841, 875, 957, 1285, 1400, 1603, 2661, 3100
VneI	GTGCAC	1 cut(s)	361
VpaK11BI	GGWCC	3 cut(s)	324, 2256, 2562
XapI	RAATTY	8 cut(s)	955, 1360, 1513, 2095, 2430, 2475, 2671, 3064
XceI	RCATGY	1 cut(s)	1596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1799
XhoI	CTCGAG	1 cut(s)	257
XmaI	CCCGGG	1 cut(s)	604
XmnI	GAANNNNTTC	1 cut(s)	1787
XspI	CTAG	7 cut(s)	864, 1626, 2160, 2369, 2519, 2825, 2841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.