Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000395.1

Orthogroup ID

OG0013112

Physical Location & Seq

Genomic Coordinates Forward (+)

9452 .. 14485

Gene Structure 5034 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000395.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3144 bp

atggagcgtgctcggcgattggcgagccgggctttcgtgaagcgcttggtttccgaggccaagcagtttcgccagaatgagagctcctctgctctgctggggtcttcctcccctgtcatgtacacaccttcaaggtacgtttcttcattgtcttcattcatgcgcacaaatcccagatcagattcgtcgctaggcaaaactggcattgccgggtcacaacagacccggtccattgccgttgaggccttgaaaaacagtgacaccttccctcgccgccataactcagctaccccagatgagcagaccaaaatggctgaggcttgtgggttcaacagcctcgattctctcatcgatgccaccgtgcccaaatcgattcgtcttgaatcgatgaagttctcaaagttcgatgaggggttgacggagagccaaatgctcgagcacatgaaacgtttggcttccaaaaacaagttgttcaagtcgtatattgggatggggtactataacacttatgttccgcctgtgattttgaggaacataatggagaatccagcttggtacacccagtacactccgtaccaggctgagatttctcagggcaggcttgagtctttgctcaatttccagaccttgatcactgaccttactggccttcccatgtcaaatgcttcattacttgatgagggaaccgccgctgccgaggcaatggccatgtgcaacaatattctgaagggcaagaagaagacttttcttattgctaacaattgtcacccccagactattgatatttgcaagactagagctgacggtttcgatctcaaggtcgtgaccgcggatcttaaggacattgattacaagagcggtgacgtttgtggtgttcttgttcagtatccggggactgagggtgaggtgttggactatggggagtttattaagaatgctcatgctaatggtgtcaaggttgtgatggcctctgatctgttggcattgacacttttgaagccgccgggtgagctgggggcggatattgtggtgggttctgctcagaggtttggtgtgccgatggggtatggaggtcctcatgcagcattcttggccacttctcaagagtacaagaggatgatgccaggaagaatcatcggtgttagtgttgattcttcggggaagcctgcgctgcgtatggccatgcagacaagggagcaacatatccgaagggacaaggctaccagcaacatttgcactgctcaggctttacttgcaaacatggctgctatgtatgctgtttatcatggacctgaaggccttaaaaccatttcccaaagggtgcatggtcttgctggggccttggcagttggattaaagaaacttgggactgaagttcagagccttcccttctttgacactgtcaaggttacggttggtgatgcacatgcaattgctgatgctgctgccaagaatggaatgaacttgagagtactggactcaaaaactatcactgtttcgtttgatgaaacaactaccttggaggatgttgatcaacttttcaaaatttttgctttgggcaagcctgtctcttttactgctgcatctcttgcaccagaagtaaagaccgctatcccttctggactaacaagggagaccccatatcttacccacccaatcttcaactcgtatcatactgagcatgagttgctacgatacattcacaagttgcagacaaaggatctttcattatgccacagcatgattccattgggatcctgtacaatgaaattaaatgcaacaactgaaatgatgccagtgacatggcctaatttctcagacattcatccttttgcccctacagaacaagctgagggttatcaggaaatgttcagagatttgggtgatctattgtgtagcatcactgggtttgattctttctcattgcaacctaatgccggagctgctggagagtatgctggactgatggttattcgggcatatcattttgcaagaggggatcaccaccgcaatgtgtgtattatacctgtttctgcacacggtacaaatcctgctagtgctgccatgtgtggaatgaaaattgtcactattggaactgatgctaagggaaacatcaacattgaagagctgaagaaggctgctgaagcaaacaaggacaacctttcagcttttatggtgacgtatccttcaactcatggagtgtatgaagaaggtattgatgagatctgtaagataattcatgacaatggaggtcaagtatacatggatggagctaacatgaatgcacaggtgggtctgacaagcccgggttggattggagctgatgtctgccatctgaacctccataagacattttgcattccacacggaggcggtggtcctggcatgggtcctattggtgtgaaggctcacttggcaccatacttgccttcccatcctgtggtttctactggtggaattcctgcccccgaaaagtctcagccacttggtaccatctccgctgcaccttggggatctgcacttattttgccaatatcatatacttatatagctatgatgggttccaagggactcactgatgcatcaaagatagcaattctgaatgcaaactacatggcaaagcgcttggagaactattaccccattctcttccggggtgtcaatggaaccgttgcccatgagttcattgttgacttgagaggctttaagaacactgctggaatagagccagaagatgttgccaagcgtctgatggactacggatttcatggaccaacaatgtcatggccagttcctggcactctcatgattgaaccaacagaaagtgaaagcaaggctgagttggacaggttttgcgatgctcttatctccatcagagaagagattggccagatcgagaaaggaaaagctgatattaacaacaacgttctaaagggagctcctcacccaccatcactgctcatgggagacacatggtcaaagccatattcccgggaatatgcagccttcccagcttcgtggctccgttcttcgaagttctggcctaccacaggacgtgttgacaatgtgtatggtgaccgcaacctcatctgcactcttcaaccagagcctgtggaggaaacagcagcagcagccactgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001505 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006544 GO:0006546 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009069 GO:0009071 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0016054 GO:0017076 GO:0017144 GO:0019752 GO:0030554 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042133 GO:0042135 GO:0042221 GO:0042737 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046686 GO:0048046 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00260 ko00630 ko01100 ko01110 ko01130 ko01200 map00260 map00630 map01100 map01110 map01130 map01200

Pfam Domains

Protein Families

GDC-P

Protein Analysis

1047

Amino Acids

113.71

Weight (kDa)

6.66

Isoelectric Point (pI)

40.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26080 AT4G33010 AT4G33010
fragaria_vesca	FvH4_2g31940
malus_domestica	MD08G1061500.v1.1 MD15G1060200.v1.1
prunus_persica	Prupe.1G412100_v2.0.a1
pyrus_communis	pycom08g05100 pycom15g05650 pycom16g25720
rosa_chinensis	RchiOBHm_Chr6g0310901
rosa_laevigata	RLG00000010452
rosa_multiflora	Rmu_ssc0000395.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158200
rosa_rugosa	Rorug06G0383900
rosa_samantha	Rh6BG507800 Rh6CG513800
rosa_wichuraiana	Rw6G043350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	164
Acc65I	GGTACC	1 cut(s)	2489
AccB1I	GGYRCC	2 cut(s)	2416, 2489
AccB7I	CCANNNNNTGG	2 cut(s)	2440, 2795
AccBSI	CCGCTC	1 cut(s)	858
AccI	GTMKAC	1 cut(s)	2259
AccII	CGCG	1 cut(s)	830
AclI	AACGTT	2 cut(s)	448, 2925
AclWI	GGATC	6 cut(s)	840, 1728, 1749, 1762, 2007, 2521
AcoI	YGGCCR	5 cut(s)	705, 1092, 1179, 2786, 2887
AcsI	RAATTY	2 cut(s)	1545, 2457
AcuI	CTGAAG	5 cut(s)	746, 1314, 1392, 2150, 2163
AfeI	AGCGCT	2 cut(s)	44, 2624
AfiI	CCNNNNNNNGG	6 cut(s)	1937, 2369, 2387, 2440, 2795, 3050
AflII	CTTAAG	1 cut(s)	836
AflIII	ACRYGT	1 cut(s)	3055
AhdI	GACNNNNNGTC	1 cut(s)	2974
AjiI	CACGTC	1 cut(s)	3056
AjnI	CCWGG	4 cut(s)	576, 1123, 2380, 2794
AjuI	GAANNNNNNNTTGG	2 cut(s)	2396, 2428
Alw21I	GWGCWC	4 cut(s)	13, 86, 441, 2941
Alw26I	GTCTC	4 cut(s)	1573, 1628, 2481, 2961
AlwI	GGATC	6 cut(s)	840, 1728, 1749, 1762, 2007, 2521
AlwNI	CAGNNNCTG	3 cut(s)	2795, 3110, 3137
Ama87I	CYCGRG	3 cut(s)	434, 2305, 2991
Aor51HI	AGCGCT	2 cut(s)	44, 2624
ApoI	RAATTY	2 cut(s)	1545, 2457
Asp718I	GGTACC	1 cut(s)	2489
AspLEI	GCGC	4 cut(s)	45, 165, 1171, 2625
AspS9I	GGNCC	7 cut(s)	228, 1073, 1289, 1338, 2378, 2390, 2771
AsuII	TTCGAA	1 cut(s)	3032
AvaI	CYCGRG	3 cut(s)	434, 2305, 2991
AvaII	GGWCC	6 cut(s)	228, 1073, 1289, 2378, 2390, 2771
BaeGI	GKGCMC	1 cut(s)	366
BalI	TGGCCA	5 cut(s)	707, 1094, 1181, 2788, 2889
BamHI	GGATCC	1 cut(s)	1754
BanI	GGYRCC	2 cut(s)	2416, 2489
BanII	GRGCYC	2 cut(s)	86, 2941
BbsI	GAAGAC	3 cut(s)	96, 144, 746
Bbv12I	GWGCWC	4 cut(s)	13, 86, 441, 2941
BbvCI	CCTCAGC	2 cut(s)	315, 1851
BceAI	ACGGC	1 cut(s)	221
BciT130I	CCWGG	4 cut(s)	578, 1125, 2382, 2796
BciVI	GTATCC	2 cut(s)	897, 2193
BclI	TGATCA	2 cut(s)	630, 1531
BcoDI	GTCTC	4 cut(s)	1573, 1628, 2481, 2961
BfaI	CTAG	3 cut(s)	191, 795, 2055
BfmI	CTRYAG	1 cut(s)	1839
BfoI	RGCGCY	2 cut(s)	46, 2626
BfrI	CTTAAG	1 cut(s)	836
BfuI	GTATCC	2 cut(s)	897, 2193
BglI	GCCNNNNNGGC	1 cut(s)	242
BglII	AGATCT	1 cut(s)	2223
BmcAI	AGTACT	1 cut(s)	1473
Bme18I	GGWCC	6 cut(s)	228, 1073, 1289, 2378, 2390, 2771
BmeRI	GACNNNNNGTC	1 cut(s)	2974
BmeT110I	CYCGRG	3 cut(s)	434, 2305, 2991
BmgBI	CACGTC	1 cut(s)	3056
BmgT120I	GGNCC	7 cut(s)	228, 1073, 1289, 1338, 2378, 2390, 2771
BmiI	GGNNCC	9 cut(s)	685, 1339, 1756, 2391, 2418, 2491, 2563, 2668, 3023
BmrI	ACTGGG	2 cut(s)	556, 1914
BmuI	ACTGGG	2 cut(s)	556, 1914
BpiI	GAAGAC	3 cut(s)	96, 144, 746
BplI	GAGNNNNNCTC	2 cut(s)	71, 103
BpmI	CTGGAG	1 cut(s)	1968
Bpu10I	CCTNAGC	4 cut(s)	315, 1242, 1851, 2103
Bpu14I	TTCGAA	1 cut(s)	3032
BpuEI	CTTGAG	5 cut(s)	623, 800, 1086, 1486, 2716
Bsa29I	ATCGAT	3 cut(s)	351, 371, 386
BsaBI	GATNNNNATC	1 cut(s)	1530
BsaI	GGTCTC	1 cut(s)	1628
BsaXI	ACNNNNNCTCC	4 cut(s)	2241, 2271, 2310, 2340
Bsc4I	CCNNNNNNNGG	6 cut(s)	1937, 2369, 2387, 2440, 2795, 3050
Bse1I	ACTGG	8 cut(s)	205, 562, 649, 1479, 1796, 1909, 2455, 2789
Bse3DI	GCAATG	5 cut(s)	204, 231, 708, 1922, 2017
Bse8I	GATNNNNATC	1 cut(s)	1530
BseBI	CCWGG	4 cut(s)	578, 1125, 2382, 2796
BseCI	ATCGAT	3 cut(s)	351, 371, 386
BseGI	GGATG	6 cut(s)	495, 1122, 1531, 1825, 2272, 2434
BseJI	GATNNNNATC	1 cut(s)	1530
BseLI	CCNNNNNNNGG	6 cut(s)	1937, 2369, 2387, 2440, 2795, 3050
BseMI	GCAATG	5 cut(s)	204, 231, 708, 1922, 2017
BseNI	ACTGG	8 cut(s)	205, 562, 649, 1479, 1796, 1909, 2455, 2789
BseRI	GAGGAG	2 cut(s)	76, 2931
BseSI	GKGCMC	1 cut(s)	366
BseYI	CCCAGC	4 cut(s)	97, 1012, 1334, 3010
BsgI	GTGCAG	4 cut(s)	2019, 2487, 2502, 3076
Bsh1236I	CGCG	1 cut(s)	830
BshNI	GGYRCC	2 cut(s)	2416, 2489
BshVI	ATCGAT	3 cut(s)	351, 371, 386
BsiHKAI	GWGCWC	4 cut(s)	13, 86, 441, 2941
BsiHKCI	CYCGRG	3 cut(s)	434, 2305, 2991
BsiSI	CCGG	9 cut(s)	28, 210, 226, 890, 1004, 1938, 2306, 2653, 2992
BslFI	GGGAC	4 cut(s)	907, 1226, 1381, 2583
BslI	CCNNNNNNNGG	6 cut(s)	1937, 2369, 2387, 2440, 2795, 3050
BsmAI	GTCTC	4 cut(s)	1573, 1628, 2481, 2961
BsmFI	GGGAC	4 cut(s)	907, 1226, 1381, 2583
BsmI	GAATGC	5 cut(s)	940, 1085, 2287, 2358, 2608
Bso31I	GGTCTC	1 cut(s)	1628
BsoBI	CYCGRG	3 cut(s)	434, 2305, 2991
Bsp119I	TTCGAA	1 cut(s)	3032
Bsp1286I	GDGCHC	5 cut(s)	13, 86, 366, 441, 2941
Bsp1407I	TGTACA	2 cut(s)	120, 1760
BspDI	ATCGAT	3 cut(s)	351, 371, 386
BspFNI	CGCG	1 cut(s)	830
BspHI	TCATGA	2 cut(s)	2239, 2805
BspLI	GGNNCC	9 cut(s)	685, 1339, 1756, 2391, 2418, 2491, 2563, 2668, 3023
BspPI	GGATC	6 cut(s)	840, 1728, 1749, 1762, 2007, 2521
BspQI	GCTCTTC	1 cut(s)	2118
BspT104I	TTCGAA	1 cut(s)	3032
BspT107I	GGYRCC	2 cut(s)	2416, 2489
BspTI	CTTAAG	1 cut(s)	836
BspTNI	GGTCTC	1 cut(s)	1628
BsrBI	CCGCTC	1 cut(s)	858
BsrDI	GCAATG	5 cut(s)	204, 231, 708, 1922, 2017
BsrGI	TGTACA	2 cut(s)	120, 1760
BsrI	ACTGG	8 cut(s)	205, 562, 649, 1479, 1796, 1909, 2455, 2789
BssNAI	GTATAC	1 cut(s)	2260
BssT1I	CCWWGG	4 cut(s)	1341, 1518, 2507, 2565
Bst1107I	GTATAC	1 cut(s)	2260
Bst2UI	CCWGG	4 cut(s)	578, 1125, 2382, 2796
Bst4CI	ACNGT	8 cut(s)	257, 361, 806, 1402, 1414, 1495, 2042, 2671
Bst6I	CTCTTC	4 cut(s)	2118, 2654, 2874, 3102
BstAFI	CTTAAG	1 cut(s)	836
BstAPI	GCANNNNNTGC	4 cut(s)	1233, 1589, 1687, 3137
BstAUI	TGTACA	2 cut(s)	120, 1760
BstBI	TTCGAA	1 cut(s)	3032
BstC8I	GCNNGC	5 cut(s)	9, 25, 599, 1167, 1562
BstDSI	CCRYGG	1 cut(s)	828
BstEII	GGTNACC	1 cut(s)	3074
BstENI	CCTNNNNNAGG	1 cut(s)	3048
BstF5I	GGATG	6 cut(s)	495, 1122, 1531, 1825, 2272, 2434
BstFNI	CGCG	1 cut(s)	830
BstH2I	RGCGCY	2 cut(s)	46, 2626
BstHHI	GCGC	4 cut(s)	45, 165, 1171, 2625
BstMAI	GTCTC	4 cut(s)	1573, 1628, 2481, 2961
BstNI	CCWGG	4 cut(s)	578, 1125, 2382, 2796
BstNSI	RCATGY	1 cut(s)	1430
BstPI	GGTNACC	1 cut(s)	3074
BstSFI	CTRYAG	1 cut(s)	1839
BstSLI	GKGCMC	1 cut(s)	366
BstUI	CGCG	1 cut(s)	830
BstV2I	GAAGAC	3 cut(s)	96, 144, 746
BstX2I	RGATCY	5 cut(s)	832, 1720, 1754, 2223, 2513
BstXI	CCANNNNNNTGG	2 cut(s)	1803, 3018
BstYI	RGATCY	5 cut(s)	832, 1720, 1754, 2223, 2513
BstZ17I	GTATAC	1 cut(s)	2260
Bsu15I	ATCGAT	3 cut(s)	351, 371, 386
BsuI	GTATCC	2 cut(s)	897, 2193
BsuTUI	ATCGAT	3 cut(s)	351, 371, 386
BtgI	CCRYGG	1 cut(s)	828
BtgZI	GCGATG	1 cut(s)	2871
BtrI	CACGTC	1 cut(s)	3056
BtsCI	GGATG	6 cut(s)	495, 1122, 1531, 1825, 2272, 2434
BtsI	GCAGTG	4 cut(s)	1236, 2712, 2954, 3135
Cac8I	GCNNGC	5 cut(s)	9, 25, 599, 1167, 1562
CaiI	CAGNNNCTG	3 cut(s)	2795, 3110, 3137
CciI	TCATGA	2 cut(s)	2239, 2805
CfoI	GCGC	4 cut(s)	45, 165, 1171, 2625
Cfr13I	GGNCC	7 cut(s)	228, 1073, 1289, 1338, 2378, 2390, 2771
Cfr42I	CCGCGG	1 cut(s)	831
Cfr9I	CCCGGG	2 cut(s)	2305, 2991
ClaI	ATCGAT	3 cut(s)	351, 371, 386
CseI	GACGC	1 cut(s)	2735
DriI	GACNNNNNGTC	1 cut(s)	2974
EaeI	YGGCCR	5 cut(s)	705, 1092, 1179, 2786, 2887
Eam1104I	CTCTTC	4 cut(s)	2118, 2654, 2874, 3102
Eam1105I	GACNNNNNGTC	1 cut(s)	2974
EarI	CTCTTC	4 cut(s)	2118, 2654, 2874, 3102
EciI	GGCGGA	2 cut(s)	504, 1034
Ecl136II	GAGCTC	2 cut(s)	84, 2939
Eco130I	CCWWGG	4 cut(s)	1341, 1518, 2507, 2565
Eco147I	AGGCCT	2 cut(s)	245, 1299
Eco24I	GRGCYC	2 cut(s)	86, 2941
Eco31I	GGTCTC	1 cut(s)	1628
Eco47I	GGWCC	6 cut(s)	228, 1073, 1289, 2378, 2390, 2771
Eco47III	AGCGCT	2 cut(s)	44, 2624
Eco53kI	GAGCTC	2 cut(s)	84, 2939
Eco57I	CTGAAG	5 cut(s)	746, 1314, 1392, 2150, 2163
Eco88I	CYCGRG	3 cut(s)	434, 2305, 2991
Eco91I	GGTNACC	1 cut(s)	3074
EcoICRI	GAGCTC	2 cut(s)	84, 2939
EcoNI	CCTNNNNNAGG	1 cut(s)	3048
EcoO109I	RGGNCCY	3 cut(s)	1073, 1338, 2390
EcoO65I	GGTNACC	1 cut(s)	3074
EcoRI	GAATTC	1 cut(s)	2457
EcoRII	CCWGG	4 cut(s)	576, 1123, 2380, 2794
EcoT14I	CCWWGG	4 cut(s)	1341, 1518, 2507, 2565
EcoT22I	ATGCAT	1 cut(s)	2584
EcoT38I	GRGCYC	2 cut(s)	86, 2941
ErhI	CCWWGG	4 cut(s)	1341, 1518, 2507, 2565
FalI	AAGNNNNNCTT	2 cut(s)	2396, 2428
FaqI	GGGAC	4 cut(s)	907, 1226, 1381, 2583
FbaI	TGATCA	2 cut(s)	630, 1531
FblI	GTMKAC	1 cut(s)	2259
FokI	GGATG	6 cut(s)	502, 1129, 1538, 1812, 2279, 2421
FriOI	GRGCYC	2 cut(s)	86, 2941
FspAI	RTGCGCAY	1 cut(s)	164
FspBI	CTAG	3 cut(s)	191, 795, 2055
FspI	TGCGCA	1 cut(s)	164
GlaI	GCGC	4 cut(s)	44, 164, 1170, 2624
GsaI	CCCAGC	4 cut(s)	101, 1016, 1338, 3014
GsuI	CTGGAG	1 cut(s)	1968
HaeII	RGCGCY	2 cut(s)	46, 2626
HapII	CCGG	9 cut(s)	28, 210, 226, 890, 1004, 1938, 2306, 2653, 2992
HgaI	GACGC	1 cut(s)	2735
HhaI	GCGC	4 cut(s)	45, 165, 1171, 2625
Hin6I	GCGC	4 cut(s)	43, 163, 1169, 2623
HinP1I	GCGC	4 cut(s)	43, 163, 1169, 2623
HincII	GTYRAC	3 cut(s)	417, 2692, 3061
HindII	GTYRAC	3 cut(s)	417, 2692, 3061
HpaII	CCGG	9 cut(s)	28, 210, 226, 890, 1004, 1938, 2306, 2653, 2992
Hpy166II	GTNNAC	7 cut(s)	123, 417, 558, 567, 2260, 2692, 3061
Hpy8I	GTNNAC	7 cut(s)	123, 417, 558, 567, 2260, 2692, 3061
Hpy99I	CGWCG	1 cut(s)	190
HpyCH4III	ACNGT	8 cut(s)	257, 361, 806, 1402, 1414, 1495, 2042, 2671
HpyCH4IV	ACGT	6 cut(s)	138, 448, 864, 2180, 2925, 3055
HpySE526I	ACGT	6 cut(s)	138, 448, 864, 2180, 2925, 3055
HspAI	GCGC	4 cut(s)	43, 163, 1169, 2623
KpnI	GGTACC	1 cut(s)	2493
Ksp22I	TGATCA	2 cut(s)	630, 1531
KspI	CCGCGG	1 cut(s)	831
LguI	GCTCTTC	1 cut(s)	2118
LmnI	GCTCC	9 cut(s)	4, 89, 1195, 1940, 2270, 2318, 2936, 2944, 3027
MaeI	CTAG	3 cut(s)	191, 795, 2055
MaeII	ACGT	6 cut(s)	138, 448, 864, 2180, 2925, 3055
MbiI	CCGCTC	1 cut(s)	858
MfeI	CAATTG	2 cut(s)	760, 1431
MflI	RGATCY	5 cut(s)	832, 1720, 1754, 2223, 2513
MhlI	GDGCHC	5 cut(s)	13, 86, 366, 441, 2941
MlsI	TGGCCA	5 cut(s)	707, 1094, 1181, 2788, 2889
MluNI	TGGCCA	5 cut(s)	707, 1094, 1181, 2788, 2889
MlyI	GAGTC	3 cut(s)	614, 1472, 2565
MmeI	TCCRAC	4 cut(s)	891, 1330, 2291, 2823
Mox20I	TGGCCA	5 cut(s)	707, 1094, 1181, 2788, 2889
Mph1103I	ATGCAT	1 cut(s)	2584
MscI	TGGCCA	5 cut(s)	707, 1094, 1181, 2788, 2889
MseI	TTAA	8 cut(s)	837, 930, 1302, 1355, 1772, 2706, 2916, 3142
MslI	CAYNNNNRTG	4 cut(s)	945, 2010, 2244, 2804
Msp20I	TGGCCA	5 cut(s)	707, 1094, 1181, 2788, 2889
MspA1I	CMGCKG	3 cut(s)	692, 830, 2501
MspCI	CTTAAG	1 cut(s)	836
MspI	CCGG	9 cut(s)	28, 210, 226, 890, 1004, 1938, 2306, 2653, 2992
MunI	CAATTG	2 cut(s)	760, 1431
Mva1269I	GAATGC	5 cut(s)	940, 1085, 2287, 2358, 2608
MvaI	CCWGG	4 cut(s)	578, 1125, 2382, 2796
MvnI	CGCG	1 cut(s)	830
NlaIV	GGNNCC	9 cut(s)	685, 1339, 1756, 2391, 2418, 2491, 2563, 2668, 3023
NmeAIII	GCCGAG	1 cut(s)	721
NmuCI	GTSAC	9 cut(s)	213, 257, 764, 823, 860, 1798, 2083, 2176, 3074
NsbI	TGCGCA	1 cut(s)	164
NsiI	ATGCAT	1 cut(s)	2584
NspI	RCATGY	1 cut(s)	1430
NspV	TTCGAA	1 cut(s)	3032
PaeR7I	CTCGAG	1 cut(s)	434
PagI	TCATGA	2 cut(s)	2239, 2805
PceI	AGGCCT	2 cut(s)	245, 1299
PciSI	GCTCTTC	1 cut(s)	2118
PcsI	WCGNNNNNNNCGW	1 cut(s)	357
PctI	GAATGC	5 cut(s)	940, 1085, 2287, 2358, 2608
PfeI	GAWTC	9 cut(s)	182, 341, 373, 383, 544, 1131, 1151, 1744, 1913
PflFI	GACNNNGTC	2 cut(s)	226, 1400
PflMI	CCANNNNNTGG	2 cut(s)	2440, 2795
PleI	GAGTC	3 cut(s)	613, 1472, 2565
PpsI	GAGTC	3 cut(s)	613, 1472, 2565
PpuMI	RGGWCCY	2 cut(s)	1073, 2390
Psp124BI	GAGCTC	2 cut(s)	86, 2941
Psp1406I	AACGTT	2 cut(s)	448, 2925
Psp5II	RGGWCCY	2 cut(s)	1073, 2390
Psp6I	CCWGG	4 cut(s)	576, 1123, 2380, 2794
PspEI	GGTNACC	1 cut(s)	3074
PspFI	CCCAGC	4 cut(s)	97, 1012, 1334, 3010
PspGI	CCWGG	4 cut(s)	576, 1123, 2380, 2794
PspN4I	GGNNCC	9 cut(s)	685, 1339, 1756, 2391, 2418, 2491, 2563, 2668, 3023
PspPI	GGNCC	7 cut(s)	228, 1073, 1289, 1338, 2378, 2390, 2771
PspPPI	RGGWCCY	2 cut(s)	1073, 2390
PspXI	VCTCGAGB	1 cut(s)	434
PstNI	CAGNNNCTG	3 cut(s)	2795, 3110, 3137
PsuI	RGATCY	5 cut(s)	832, 1720, 1754, 2223, 2513
PsyI	GACNNNGTC	2 cut(s)	226, 1400
RseI	CAYNNNNRTG	4 cut(s)	945, 2010, 2244, 2804
SacI	GAGCTC	2 cut(s)	86, 2941
SacII	CCGCGG	1 cut(s)	831
SapI	GCTCTTC	1 cut(s)	2118
SaqAI	TTAA	8 cut(s)	837, 930, 1302, 1355, 1772, 2706, 2916, 3142
Sau96I	GGNCC	7 cut(s)	228, 1073, 1289, 1338, 2378, 2390, 2771
ScaI	AGTACT	1 cut(s)	1473
SchI	GAGTC	3 cut(s)	614, 1472, 2565
SduI	GDGCHC	5 cut(s)	13, 86, 366, 441, 2941
SfcI	CTRYAG	1 cut(s)	1839
Sfr274I	CTCGAG	1 cut(s)	434
Sfr303I	CCGCGG	1 cut(s)	831
SfuI	TTCGAA	1 cut(s)	3032
SgrBI	CCGCGG	1 cut(s)	831
SinI	GGWCC	6 cut(s)	228, 1073, 1289, 2378, 2390, 2771
SlaI	CTCGAG	1 cut(s)	434
SmaI	CCCGGG	2 cut(s)	2307, 2993
SmiMI	CAYNNNNRTG	4 cut(s)	945, 2010, 2244, 2804
SmlI	CTYRAG	7 cut(s)	434, 602, 815, 836, 1101, 1465, 2695
SmoI	CTYRAG	7 cut(s)	434, 602, 815, 836, 1101, 1465, 2695
SseBI	AGGCCT	2 cut(s)	245, 1299
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	3 cut(s)	191, 795, 2055
SstI	GAGCTC	2 cut(s)	86, 2941
StuI	AGGCCT	2 cut(s)	245, 1299
StyI	CCWWGG	4 cut(s)	1341, 1518, 2507, 2565
TaaI	ACNGT	8 cut(s)	257, 361, 806, 1402, 1414, 1495, 2042, 2671
TaiI	ACGT	6 cut(s)	141, 451, 867, 2183, 2928, 3058
TaqI	TCGA	9 cut(s)	339, 351, 371, 386, 405, 435, 810, 2895, 3032
TatI	WGTACW	5 cut(s)	120, 564, 1107, 1471, 1760
TauI	GCSGC	3 cut(s)	276, 692, 1003
TfiI	GAWTC	9 cut(s)	182, 341, 373, 383, 544, 1131, 1151, 1744, 1913
Tru1I	TTAA	8 cut(s)	837, 930, 1302, 1355, 1772, 2706, 2916, 3142
Tru9I	TTAA	8 cut(s)	837, 930, 1302, 1355, 1772, 2706, 2916, 3142
TseFI	GTSAC	9 cut(s)	213, 257, 764, 823, 860, 1798, 2083, 2176, 3074
Tsp45I	GTSAC	9 cut(s)	213, 257, 764, 823, 860, 1798, 2083, 2176, 3074
TspGWI	ACGGA	5 cut(s)	434, 561, 2382, 2775, 3014
TspMI	CCCGGG	2 cut(s)	2305, 2991
Tth111I	GACNNNGTC	2 cut(s)	226, 1400
Van91I	CCANNNNNTGG	2 cut(s)	2440, 2795
Vha464I	CTTAAG	1 cut(s)	836
VpaK11BI	GGWCC	6 cut(s)	228, 1073, 1289, 2378, 2390, 2771
XagI	CCTNNNNNAGG	1 cut(s)	3048
XapI	RAATTY	2 cut(s)	1545, 2457
XceI	RCATGY	1 cut(s)	1430
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1322, 2749, 2781
XhoI	CTCGAG	1 cut(s)	434
XmaI	CCCGGG	2 cut(s)	2305, 2991
XmiI	GTMKAC	1 cut(s)	2259
XspI	CTAG	3 cut(s)	191, 795, 2055
ZrmI	AGTACT	1 cut(s)	1473
Zsp2I	ATGCAT	1 cut(s)	2584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.