Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0013112

Physical Location & Seq

Genomic Coordinates Reverse (-)

67217052 .. 67222016

Gene Structure 4965 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG513800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGGAGCGTGCTCGGCGATTGGCGAACCGGGCTTTCGTGAAGCGCTTGGTTTCCGAGGCCAAGCAGTTTCGCCAGAATGAGAGCTCCTCTGCTCTGCTGGGGTCTTCCTCCCCTGTTATGTACACACCTTCAAGGTACGTTTCTTCATTGTCTTCATTCATGCGCACAAATCCCAGATCAGATTCGTCGCTAGGCAAAACTGGCATTGCCGGGTCACAACAGACCCGGTCCATTGCCGTTGAGGCCTTGAAAAACAGTGACACCTTCGCTCGCCGCCATAACTCAGCTACCCCAGATGAGCAGACCAAAATGGCCGAGCTGTGTGGGTTCAACGGCCTCGATTCTCTCATCGATGCCACCGTGCCCAAATCGATTCGTCTTGAATCGATGAAGTTCTCAAAGTTCGATGAGGGGTTGACAGAGAGCCAAATGCTTGAGCACATGAAAGGTTTGGCTTCTAAAAACAAGTTGTTCAAGTCGTATATTGGGATGGGGTACTATAACACTTATGTTCCGCCTGTGATTTTGAGGAACATAATGGAGAATCCAGCTTGGTACACCCAGTACACTCCGTACCAGGCTGAGATTTCTCAGGGCAGGCTTGAGTCTTTGCTCAATTTCCAGACCTTGATCACTGACCTTACTGGCCTTCCCATGTCAAATGCTTCATTACTTGATGAGGGAACCGCAGCTGCCGAAGCAATGGCCATGTGTAACAATATTCTAAAGGGGAAGAAGAAGACTTTTCTTATTGCTAACAATTGTCACCCCCAGACTATTGATATTTGCAAGACTAGAGCTGATGGTTTCGATCTCAAGGTCGTGACCGCGGATCTTAAGGACATTGATTACAAGAGTGGTGACGTTTGTGGTGTGCTTGTTCAGTATCCGGGGACTGAGGGTGAGGTGTTGGACTATGGGGAGTTTATTAAGAATGCTCATGCTAATGGTGTCAAGGTTGTGATGGCGTCTGATCTGTTGGCATTGACACTTTTGAAGCCGCCGGGTGAGTTGGGGGCGGATATTGTGGTGGGTTCTGCTCAGAGGTTTGGTGTGCCGATGGGGTATGGCGGTCCTCATGCAGCATTCCTGGCCACTTCTCAAGAGTACAAGAGGATGATGCCAGGAAGAATTATCGGTGTTAGTGTTGATTCTTCGGGGAAGCCTGCGCTGCGTATGGCCATGCAGACAAGGGAGCAACATATCCGAAGGGACAAGGCTACCAGCAACATTTGCACTGCTCAGGCTTTACTTGCAAATATGGCTGCTATGTATGCTGTTTATCATGGACCTGAAGGCCTTAAAACCATTTCCCAAAGGGTGCATGGTCTTGCTGGGGCTTTTGCAGTTGGATTAAAGAAACTTGGGACAGCGGAAGTTCAGAGCCTTCCCTTCTTTGACACCGTCAAGGTTACAGTTGGTGATGCACATGCAATTGCTGATGCTGCTGCCAAGAACGGAATTAACTTGAGAGTACTGGACTCAAAAACTATCACTGTTTCATTTGATGAAACAACTACCTTGGAGGATGTTGATCAACTTTTCAAAATTTTTGCTTTGGGCAAGCATGTCTCTTTTACTGCTGCATCTCTTGCACCAGAAGTAAAGACCGCTATCCCTTCTGGACTAACAAGGGAGACCCCATATCTTACCCACCCAATCTTCAACTCGTATCATACTGAGCATGAGTTGCTACGATACATTCACAAGTTGCAGTCGAAGGATCTTTCATTATGCCACAGTATGATTCCATTGGGATCCTGTACAATGAAATTAAATGCAACAACTGAAATGATGCCAGTGACATGGCCTAATTTCTCAGACATTCATCCTTTTGCCCCTACAGAACAAGCTGAGGGTTATCAGGAAATGTTCAGAGATTTGGGTGATCTATTGTGTAGCATCACTGGGTTTGACTCTTTCTCATTGCAACCTAATGCCGGAGCTGCTGGAGAGTATGCTGGACTGATGGTTATTCGGGCATATCATTTTGCAAGAGGGGATCATCACCGCAATGTGTGTATTATACCTGTTTCTGCACACGGTACAAATCCTGCTAGTGCTGCCATGTGTGGAATGAAAATTGTCACTATTGGAACTGATGCTAAGGGAAACATCAACATTGAAGAGCTGAAGAAGGCTGCTGAATCAAACAAGGACAACCTATCAGCTCTTATGGTGACGTATCCTTCAACTCATGGAGTGTATGAAGAAGGTATTGATGAGATCTGTAAGATAATTCATGACAATGGAGGTCAAGTATACATGGATGGAGCTAACATGAATGCACAGGTGGGTCTGACAAGCCCGGGTTGGATTGGAGCTGATGTCTGCCATTTGAACCTCCATAAGACATTTTGCATTCCACACGGAGGCGGTGGTCCTGGCATGGGTCCTATTGGTGTGAAGGCTCACTTGGCACCATACTTGCCTTCCCATCCTGTGGTTCCTACTGGTGGAATTCCTGCCCCCGAAAAGTCTCAGCCACTTGGTACCATCTCCGCTGCACCTTGGGGATCTGCACTTATTTTGCCAATATCATATACTTATATAGCTATGATGGGTTCCAAGGGACTCACTGATGCATCAAAGATAGCAATTCTGAATGCAAACTACATGGCAAAGCGCTTGGAGAACTATTACCCCATTCTTTTCCGTGGGGTCAATGGAACCGTTGCCCATGAGTTCATTGTTGACTTGAGAGGCTTTAAGAACACTGCTGGAATAGAGCCAGAAGATGTTGCCAAGCGTCTGATGGACTACGGATTTCATGGACCAACAATGTCATGGCCAGTTCCTGGCACTCTCATGATTGAACCAACAGAAAGTGAAAGCAAGGCTGAGTTGGACAGGTTTTGCGATGCTCTTATCTCCATCAGAGAAGAGATTGGCCAGATCGAGAAAGGAAAAGCTGATATTCACAACAACGTTCTGAAGGGAGCTCCTCACCCATCATCCCTGCTCATGGGAGACACATGGTCAAAGCCATATTCCCGGGAATATGCAGCCTTCCCAGCTTCGTGGCTCCGTTCTTCGAAGTTCTGGCCTACCACAGGACGTGTTGACAATGTGTATGGTGACCGCAACCTTATCTGCACTCTTCAACCAGAGCCTGTGGAGGAAACAGCAGCAGCAGCCACTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001505 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006544 GO:0006546 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009069 GO:0009071 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0016054 GO:0017076 GO:0017144 GO:0019752 GO:0030554 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042133 GO:0042135 GO:0042221 GO:0042737 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0046686 GO:0048046 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606

KEGG Pathways

Metabolic & Signaling

ko00260 ko00630 ko01100 ko01110 ko01130 ko01200 map00260 map00630 map01100 map01110 map01130 map01200

Pfam Domains

Protein Families

GDC-P

Protein Analysis

1048

Amino Acids

113.74

Weight (kDa)

6.61

Isoelectric Point (pI)

40.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDC-P	PF02347	92 - 518	1.5e-182	Glycine cleavage system P-protein
GDC-P	PF02347	535 - 811	4.4e-10	Glycine cleavage system P-protein
GcvP2_C	PF21478	862 - 983	5.8e-59	Glycine dehydrogenase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26080 AT4G33010 AT4G33010
fragaria_vesca	FvH4_2g31940
malus_domestica	MD08G1061500.v1.1 MD15G1060200.v1.1
prunus_persica	Prupe.1G412100_v2.0.a1
pyrus_communis	pycom08g05100 pycom15g05650 pycom16g25720
rosa_chinensis	RchiOBHm_Chr6g0310901
rosa_laevigata	RLG00000010452
rosa_multiflora	Rmu_ssc0000395.1_g000001
rosa_roxburghii	Rroxscaffold_7G00158200
rosa_rugosa	Rorug06G0383900
rosa_samantha	Rh6BG507800 Rh6CG513800
rosa_wichuraiana	Rw6G043350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	164
Acc65I	GGTACC	1 cut(s)	2492
AccB1I	GGYRCC	2 cut(s)	2419, 2492
AccB7I	CCANNNNNTGG	2 cut(s)	2443, 2798
AccI	GTMKAC	1 cut(s)	2262
AccII	CGCG	1 cut(s)	830
AclI	AACGTT	1 cut(s)	2928
AclWI	GGATC	6 cut(s)	840, 1731, 1752, 1765, 2010, 2524
AcoI	YGGCCR	6 cut(s)	312, 705, 1092, 1179, 2789, 2890
AcsI	RAATTY	2 cut(s)	1548, 2460
AcuI	CTGAAG	3 cut(s)	1314, 2153, 2954
AcyI	GRCGYC	1 cut(s)	968
AfeI	AGCGCT	2 cut(s)	44, 2627
AfiI	CCNNNNNNNGG	8 cut(s)	1940, 2372, 2390, 2443, 2456, 2798, 2965, 3053
AflII	CTTAAG	1 cut(s)	836
AflIII	ACRYGT	1 cut(s)	3058
AhdI	GACNNNNNGTC	1 cut(s)	2977
AjiI	CACGTC	1 cut(s)	3059
AjnI	CCWGG	5 cut(s)	576, 1089, 1123, 2383, 2797
AjuI	GAANNNNNNNTTGG	2 cut(s)	2399, 2431
Alw21I	GWGCWC	4 cut(s)	13, 86, 441, 2944
Alw26I	GTCTC	4 cut(s)	1576, 1631, 2484, 2964
AlwI	GGATC	6 cut(s)	840, 1731, 1752, 1765, 2010, 2524
AlwNI	CAGNNNCTG	3 cut(s)	2798, 3113, 3140
Ama87I	CYCGRG	2 cut(s)	2308, 2994
Aor51HI	AGCGCT	2 cut(s)	44, 2627
ApoI	RAATTY	2 cut(s)	1548, 2460
Asp718I	GGTACC	1 cut(s)	2492
AspLEI	GCGC	4 cut(s)	45, 165, 1171, 2628
AspS9I	GGNCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
AsuC2I	CCSGG	9 cut(s)	29, 211, 226, 891, 1005, 2309, 2310, 2995, 2996
AsuII	TTCGAA	1 cut(s)	3035
AvaI	CYCGRG	2 cut(s)	2308, 2994
AvaII	GGWCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
BaeGI	GKGCMC	1 cut(s)	366
BalI	TGGCCA	5 cut(s)	707, 1094, 1181, 2791, 2892
BamHI	GGATCC	1 cut(s)	1757
BanI	GGYRCC	2 cut(s)	2419, 2492
BanII	GRGCYC	2 cut(s)	86, 2944
BbsI	GAAGAC	3 cut(s)	96, 144, 746
Bbv12I	GWGCWC	4 cut(s)	13, 86, 441, 2944
BbvCI	CCTCAGC	1 cut(s)	1854
BceAI	ACGGC	2 cut(s)	221, 349
BciT130I	CCWGG	5 cut(s)	578, 1091, 1125, 2385, 2799
BciVI	GTATCC	2 cut(s)	897, 2196
BclI	TGATCA	2 cut(s)	630, 1534
BcnI	CCSGG	9 cut(s)	29, 211, 226, 891, 1005, 2309, 2310, 2995, 2996
BcoDI	GTCTC	4 cut(s)	1576, 1631, 2484, 2964
BfaI	CTAG	3 cut(s)	191, 795, 2058
BfmI	CTRYAG	1 cut(s)	1842
BfoI	RGCGCY	2 cut(s)	46, 2629
BfrI	CTTAAG	1 cut(s)	836
BfuI	GTATCC	2 cut(s)	897, 2196
BglI	GCCNNNNNGGC	1 cut(s)	242
BglII	AGATCT	1 cut(s)	2226
BmcAI	AGTACT	1 cut(s)	1476
Bme18I	GGWCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
BmeRI	GACNNNNNGTC	1 cut(s)	2977
BmeT110I	CYCGRG	2 cut(s)	2308, 2994
BmgBI	CACGTC	1 cut(s)	3059
BmgT120I	GGNCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
BmiI	GGNNCC	9 cut(s)	685, 1759, 2394, 2421, 2448, 2494, 2566, 2671, 3026
BmrI	ACTGGG	2 cut(s)	556, 1917
BmuI	ACTGGG	2 cut(s)	556, 1917
BpiI	GAAGAC	3 cut(s)	96, 144, 746
BplI	GAGNNNNNCTC	2 cut(s)	71, 103
BpmI	CTGGAG	1 cut(s)	1971
Bpu10I	CCTNAGC	3 cut(s)	1242, 1854, 2106
Bpu14I	TTCGAA	1 cut(s)	3035
BpuEI	CTTGAG	6 cut(s)	455, 623, 800, 1086, 1489, 2719
BpuMI	CCSGG	9 cut(s)	29, 211, 226, 891, 1005, 2309, 2310, 2995, 2996
Bsa29I	ATCGAT	3 cut(s)	351, 371, 386
BsaBI	GATNNNNATC	1 cut(s)	1533
BsaHI	GRCGYC	1 cut(s)	968
BsaI	GGTCTC	1 cut(s)	1631
BsaJI	CCNNGG	9 cut(s)	54, 828, 890, 1521, 2308, 2510, 2568, 2656, 2994
BsaXI	ACNNNNNCTCC	4 cut(s)	2244, 2274, 2313, 2343
Bsc4I	CCNNNNNNNGG	8 cut(s)	1940, 2372, 2390, 2443, 2456, 2798, 2965, 3053
Bse1I	ACTGG	8 cut(s)	205, 562, 649, 1482, 1799, 1912, 2458, 2792
Bse3DI	GCAATG	5 cut(s)	204, 231, 708, 1925, 2020
Bse8I	GATNNNNATC	1 cut(s)	1533
BseBI	CCWGG	5 cut(s)	578, 1091, 1125, 2385, 2799
BseCI	ATCGAT	3 cut(s)	351, 371, 386
BseDI	CCNNGG	9 cut(s)	54, 828, 890, 1521, 2308, 2510, 2568, 2656, 2994
BseGI	GGATG	7 cut(s)	495, 1122, 1534, 1828, 2275, 2437, 2954
BseJI	GATNNNNATC	1 cut(s)	1533
BseLI	CCNNNNNNNGG	8 cut(s)	1940, 2372, 2390, 2443, 2456, 2798, 2965, 3053
BseMI	GCAATG	5 cut(s)	204, 231, 708, 1925, 2020
BseNI	ACTGG	8 cut(s)	205, 562, 649, 1482, 1799, 1912, 2458, 2792
BseRI	GAGGAG	2 cut(s)	76, 2934
BseSI	GKGCMC	1 cut(s)	366
BseYI	CCCAGC	3 cut(s)	97, 1334, 3013
BsgI	GTGCAG	4 cut(s)	2022, 2490, 2505, 3079
Bsh1236I	CGCG	1 cut(s)	830
BshNI	GGYRCC	2 cut(s)	2419, 2492
BshVI	ATCGAT	3 cut(s)	351, 371, 386
BsiHKAI	GWGCWC	4 cut(s)	13, 86, 441, 2944
BsiHKCI	CYCGRG	2 cut(s)	2308, 2994
BsiSI	CCGG	8 cut(s)	28, 210, 226, 890, 1004, 1941, 2309, 2995
BslFI	GGGAC	4 cut(s)	907, 1226, 1381, 2586
BslI	CCNNNNNNNGG	8 cut(s)	1940, 2372, 2390, 2443, 2456, 2798, 2965, 3053
BsmAI	GTCTC	4 cut(s)	1576, 1631, 2484, 2964
BsmFI	GGGAC	4 cut(s)	907, 1226, 1381, 2586
BsmI	GAATGC	5 cut(s)	940, 1085, 2290, 2361, 2611
Bso31I	GGTCTC	1 cut(s)	1631
BsoBI	CYCGRG	2 cut(s)	2308, 2994
Bsp119I	TTCGAA	1 cut(s)	3035
Bsp1286I	GDGCHC	5 cut(s)	13, 86, 366, 441, 2944
Bsp1407I	TGTACA	2 cut(s)	120, 1763
BspDI	ATCGAT	3 cut(s)	351, 371, 386
BspFNI	CGCG	1 cut(s)	830
BspHI	TCATGA	2 cut(s)	2242, 2808
BspLI	GGNNCC	9 cut(s)	685, 1759, 2394, 2421, 2448, 2494, 2566, 2671, 3026
BspPI	GGATC	6 cut(s)	840, 1731, 1752, 1765, 2010, 2524
BspQI	GCTCTTC	1 cut(s)	2121
BspT104I	TTCGAA	1 cut(s)	3035
BspT107I	GGYRCC	2 cut(s)	2419, 2492
BspTI	CTTAAG	1 cut(s)	836
BspTNI	GGTCTC	1 cut(s)	1631
BsrDI	GCAATG	5 cut(s)	204, 231, 708, 1925, 2020
BsrGI	TGTACA	2 cut(s)	120, 1763
BsrI	ACTGG	8 cut(s)	205, 562, 649, 1482, 1799, 1912, 2458, 2792
BssECI	CCNNGG	9 cut(s)	54, 828, 890, 1521, 2308, 2510, 2568, 2656, 2994
BssNAI	GTATAC	1 cut(s)	2263
BssNI	GRCGYC	1 cut(s)	968
BssT1I	CCWWGG	3 cut(s)	1521, 2510, 2568
Bst1107I	GTATAC	1 cut(s)	2263
Bst2UI	CCWGG	5 cut(s)	578, 1091, 1125, 2385, 2799
Bst4CI	ACNGT	8 cut(s)	257, 361, 1405, 1417, 1498, 1742, 2045, 2674
Bst6I	CTCTTC	3 cut(s)	2121, 2877, 3105
BstACI	GRCGYC	1 cut(s)	968
BstAFI	CTTAAG	1 cut(s)	836
BstAPI	GCANNNNNTGC	4 cut(s)	1233, 1592, 1690, 3140
BstAUI	TGTACA	2 cut(s)	120, 1763
BstBI	TTCGAA	1 cut(s)	3035
BstC8I	GCNNGC	5 cut(s)	9, 271, 599, 1167, 1565
BstDSI	CCRYGG	2 cut(s)	828, 2656
BstEII	GGTNACC	1 cut(s)	3077
BstENI	CCTNNNNNAGG	1 cut(s)	3051
BstF5I	GGATG	7 cut(s)	495, 1122, 1534, 1828, 2275, 2437, 2954
BstFNI	CGCG	1 cut(s)	830
BstH2I	RGCGCY	2 cut(s)	46, 2629
BstHHI	GCGC	4 cut(s)	45, 165, 1171, 2628
BstMAI	GTCTC	4 cut(s)	1576, 1631, 2484, 2964
BstNI	CCWGG	5 cut(s)	578, 1091, 1125, 2385, 2799
BstNSI	RCATGY	2 cut(s)	1433, 1571
BstPI	GGTNACC	1 cut(s)	3077
BstSFI	CTRYAG	1 cut(s)	1842
BstSLI	GKGCMC	1 cut(s)	366
BstUI	CGCG	1 cut(s)	830
BstV2I	GAAGAC	3 cut(s)	96, 144, 746
BstX2I	RGATCY	5 cut(s)	832, 1723, 1757, 2226, 2516
BstXI	CCANNNNNNTGG	2 cut(s)	1806, 3021
BstYI	RGATCY	5 cut(s)	832, 1723, 1757, 2226, 2516
BstZ17I	GTATAC	1 cut(s)	2263
Bsu15I	ATCGAT	3 cut(s)	351, 371, 386
BsuI	GTATCC	2 cut(s)	897, 2196
BsuTUI	ATCGAT	3 cut(s)	351, 371, 386
BtgI	CCRYGG	2 cut(s)	828, 2656
BtgZI	GCGATG	1 cut(s)	2874
BtrI	CACGTC	1 cut(s)	3059
BtsCI	GGATG	7 cut(s)	495, 1122, 1534, 1828, 2275, 2437, 2954
BtsI	GCAGTG	3 cut(s)	1236, 2715, 3138
BtsIMutI	CAGTG	9 cut(s)	262, 633, 1236, 1494, 1806, 1905, 2577, 2715, 3138
Cac8I	GCNNGC	5 cut(s)	9, 271, 599, 1167, 1565
CaiI	CAGNNNCTG	3 cut(s)	2798, 3113, 3140
CciI	TCATGA	2 cut(s)	2242, 2808
CfoI	GCGC	4 cut(s)	45, 165, 1171, 2628
Cfr13I	GGNCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
Cfr42I	CCGCGG	1 cut(s)	831
Cfr9I	CCCGGG	2 cut(s)	2308, 2994
ClaI	ATCGAT	3 cut(s)	351, 371, 386
CseI	GACGC	2 cut(s)	957, 2738
DriI	GACNNNNNGTC	1 cut(s)	2977
EaeI	YGGCCR	6 cut(s)	312, 705, 1092, 1179, 2789, 2890
Eam1104I	CTCTTC	3 cut(s)	2121, 2877, 3105
Eam1105I	GACNNNNNGTC	1 cut(s)	2977
EarI	CTCTTC	3 cut(s)	2121, 2877, 3105
EciI	GGCGGA	2 cut(s)	504, 1034
Ecl136II	GAGCTC	2 cut(s)	84, 2942
Eco130I	CCWWGG	3 cut(s)	1521, 2510, 2568
Eco147I	AGGCCT	2 cut(s)	245, 1299
Eco24I	GRGCYC	2 cut(s)	86, 2944
Eco31I	GGTCTC	1 cut(s)	1631
Eco47I	GGWCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
Eco47III	AGCGCT	2 cut(s)	44, 2627
Eco53kI	GAGCTC	2 cut(s)	84, 2942
Eco57I	CTGAAG	3 cut(s)	1314, 2153, 2954
Eco88I	CYCGRG	2 cut(s)	2308, 2994
Eco91I	GGTNACC	1 cut(s)	3077
EcoICRI	GAGCTC	2 cut(s)	84, 2942
EcoNI	CCTNNNNNAGG	1 cut(s)	3051
EcoO109I	RGGNCCY	1 cut(s)	2393
EcoO65I	GGTNACC	1 cut(s)	3077
EcoRI	GAATTC	1 cut(s)	2460
EcoRII	CCWGG	5 cut(s)	576, 1089, 1123, 2383, 2797
EcoT14I	CCWWGG	3 cut(s)	1521, 2510, 2568
EcoT22I	ATGCAT	1 cut(s)	2587
EcoT38I	GRGCYC	2 cut(s)	86, 2944
ErhI	CCWWGG	3 cut(s)	1521, 2510, 2568
FalI	AAGNNNNNCTT	2 cut(s)	2399, 2431
FaqI	GGGAC	4 cut(s)	907, 1226, 1381, 2586
FbaI	TGATCA	2 cut(s)	630, 1534
FblI	GTMKAC	1 cut(s)	2262
FokI	GGATG	7 cut(s)	502, 1129, 1541, 1815, 2282, 2424, 2941
FriOI	GRGCYC	2 cut(s)	86, 2944
FspAI	RTGCGCAY	1 cut(s)	164
FspBI	CTAG	3 cut(s)	191, 795, 2058
FspI	TGCGCA	1 cut(s)	164
GlaI	GCGC	4 cut(s)	44, 164, 1170, 2627
GsaI	CCCAGC	3 cut(s)	101, 1338, 3017
GsuI	CTGGAG	1 cut(s)	1971
HaeII	RGCGCY	2 cut(s)	46, 2629
HapII	CCGG	8 cut(s)	28, 210, 226, 890, 1004, 1941, 2309, 2995
HgaI	GACGC	2 cut(s)	957, 2738
HhaI	GCGC	4 cut(s)	45, 165, 1171, 2628
Hin1I	GRCGYC	1 cut(s)	968
Hin6I	GCGC	4 cut(s)	43, 163, 1169, 2626
HinP1I	GCGC	4 cut(s)	43, 163, 1169, 2626
HincII	GTYRAC	3 cut(s)	417, 2695, 3064
HindII	GTYRAC	3 cut(s)	417, 2695, 3064
HpaII	CCGG	8 cut(s)	28, 210, 226, 890, 1004, 1941, 2309, 2995
Hpy166II	GTNNAC	7 cut(s)	123, 417, 558, 567, 2263, 2695, 3064
Hpy8I	GTNNAC	7 cut(s)	123, 417, 558, 567, 2263, 2695, 3064
Hpy99I	CGWCG	1 cut(s)	190
HpyCH4III	ACNGT	8 cut(s)	257, 361, 1405, 1417, 1498, 1742, 2045, 2674
HpyCH4IV	ACGT	5 cut(s)	138, 864, 2183, 2928, 3058
HpySE526I	ACGT	5 cut(s)	138, 864, 2183, 2928, 3058
Hsp92I	GRCGYC	1 cut(s)	968
HspAI	GCGC	4 cut(s)	43, 163, 1169, 2626
KpnI	GGTACC	1 cut(s)	2496
Ksp22I	TGATCA	2 cut(s)	630, 1534
KspI	CCGCGG	1 cut(s)	831
LguI	GCTCTTC	1 cut(s)	2121
LmnI	GCTCC	9 cut(s)	4, 89, 1195, 1943, 2273, 2321, 2939, 2947, 3030
MaeI	CTAG	3 cut(s)	191, 795, 2058
MaeII	ACGT	5 cut(s)	138, 864, 2183, 2928, 3058
MfeI	CAATTG	2 cut(s)	760, 1434
MflI	RGATCY	5 cut(s)	832, 1723, 1757, 2226, 2516
MhlI	GDGCHC	5 cut(s)	13, 86, 366, 441, 2944
MlsI	TGGCCA	5 cut(s)	707, 1094, 1181, 2791, 2892
MluNI	TGGCCA	5 cut(s)	707, 1094, 1181, 2791, 2892
MlyI	GAGTC	4 cut(s)	614, 1475, 1910, 2568
MmeI	TCCRAC	4 cut(s)	891, 1330, 2294, 2826
Mox20I	TGGCCA	5 cut(s)	707, 1094, 1181, 2791, 2892
Mph1103I	ATGCAT	1 cut(s)	2587
MscI	TGGCCA	5 cut(s)	707, 1094, 1181, 2791, 2892
MseI	TTAA	7 cut(s)	837, 930, 1302, 1355, 1464, 1775, 2709
MslI	CAYNNNNRTG	4 cut(s)	945, 2013, 2247, 2807
Msp20I	TGGCCA	5 cut(s)	707, 1094, 1181, 2791, 2892
MspA1I	CMGCKG	4 cut(s)	692, 830, 1373, 2504
MspCI	CTTAAG	1 cut(s)	836
MspI	CCGG	8 cut(s)	28, 210, 226, 890, 1004, 1941, 2309, 2995
MunI	CAATTG	2 cut(s)	760, 1434
Mva1269I	GAATGC	5 cut(s)	940, 1085, 2290, 2361, 2611
MvaI	CCWGG	5 cut(s)	578, 1091, 1125, 2385, 2799
MvnI	CGCG	1 cut(s)	830
NciI	CCSGG	9 cut(s)	29, 211, 226, 891, 1005, 2309, 2310, 2995, 2996
NlaIV	GGNNCC	9 cut(s)	685, 1759, 2394, 2421, 2448, 2494, 2566, 2671, 3026
NmeAIII	GCCGAG	1 cut(s)	340
NmuCI	GTSAC	9 cut(s)	213, 257, 764, 823, 860, 1801, 2086, 2179, 3077
NsbI	TGCGCA	1 cut(s)	164
NsiI	ATGCAT	1 cut(s)	2587
NspI	RCATGY	2 cut(s)	1433, 1571
NspV	TTCGAA	1 cut(s)	3035
PagI	TCATGA	2 cut(s)	2242, 2808
PceI	AGGCCT	2 cut(s)	245, 1299
PciSI	GCTCTTC	1 cut(s)	2121
PcsI	WCGNNNNNNNCGW	1 cut(s)	357
PctI	GAATGC	5 cut(s)	940, 1085, 2290, 2361, 2611
PfeI	GAWTC	8 cut(s)	182, 341, 373, 383, 544, 1151, 1747, 2147
PflFI	GACNNNGTC	2 cut(s)	226, 1403
PflMI	CCANNNNNTGG	2 cut(s)	2443, 2798
PleI	GAGTC	4 cut(s)	613, 1475, 1910, 2568
PpsI	GAGTC	4 cut(s)	613, 1475, 1910, 2568
PpuMI	RGGWCCY	1 cut(s)	2393
Psp124BI	GAGCTC	2 cut(s)	86, 2944
Psp1406I	AACGTT	1 cut(s)	2928
Psp5II	RGGWCCY	1 cut(s)	2393
Psp6I	CCWGG	5 cut(s)	576, 1089, 1123, 2383, 2797
PspEI	GGTNACC	1 cut(s)	3077
PspFI	CCCAGC	3 cut(s)	97, 1334, 3013
PspGI	CCWGG	5 cut(s)	576, 1089, 1123, 2383, 2797
PspN4I	GGNNCC	9 cut(s)	685, 1759, 2394, 2421, 2448, 2494, 2566, 2671, 3026
PspPI	GGNCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
PspPPI	RGGWCCY	1 cut(s)	2393
PstNI	CAGNNNCTG	3 cut(s)	2798, 3113, 3140
PsuI	RGATCY	5 cut(s)	832, 1723, 1757, 2226, 2516
PsyI	GACNNNGTC	2 cut(s)	226, 1403
PvuII	CAGCTG	1 cut(s)	692
RseI	CAYNNNNRTG	4 cut(s)	945, 2013, 2247, 2807
SacI	GAGCTC	2 cut(s)	86, 2944
SacII	CCGCGG	1 cut(s)	831
SapI	GCTCTTC	1 cut(s)	2121
SaqAI	TTAA	7 cut(s)	837, 930, 1302, 1355, 1464, 1775, 2709
Sau96I	GGNCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
ScaI	AGTACT	1 cut(s)	1476
SchI	GAGTC	4 cut(s)	614, 1475, 1910, 2568
SduI	GDGCHC	5 cut(s)	13, 86, 366, 441, 2944
SfcI	CTRYAG	1 cut(s)	1842
Sfr303I	CCGCGG	1 cut(s)	831
SfuI	TTCGAA	1 cut(s)	3035
SgrBI	CCGCGG	1 cut(s)	831
SinI	GGWCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
SmaI	CCCGGG	2 cut(s)	2310, 2996
SmiMI	CAYNNNNRTG	4 cut(s)	945, 2013, 2247, 2807
SmlI	CTYRAG	7 cut(s)	434, 602, 815, 836, 1101, 1468, 2698
SmoI	CTYRAG	7 cut(s)	434, 602, 815, 836, 1101, 1468, 2698
SseBI	AGGCCT	2 cut(s)	245, 1299
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	3 cut(s)	191, 795, 2058
SstI	GAGCTC	2 cut(s)	86, 2944
StuI	AGGCCT	2 cut(s)	245, 1299
StyI	CCWWGG	3 cut(s)	1521, 2510, 2568
TaaI	ACNGT	8 cut(s)	257, 361, 1405, 1417, 1498, 1742, 2045, 2674
TaiI	ACGT	5 cut(s)	141, 867, 2186, 2931, 3061
TaqI	TCGA	9 cut(s)	339, 351, 371, 386, 405, 810, 1718, 2898, 3035
TatI	WGTACW	5 cut(s)	120, 564, 1107, 1474, 1763
TauI	GCSGC	2 cut(s)	276, 1003
TfiI	GAWTC	8 cut(s)	182, 341, 373, 383, 544, 1151, 1747, 2147
Tru1I	TTAA	7 cut(s)	837, 930, 1302, 1355, 1464, 1775, 2709
Tru9I	TTAA	7 cut(s)	837, 930, 1302, 1355, 1464, 1775, 2709
TscAI	CASTG	9 cut(s)	262, 640, 1243, 1501, 1806, 1912, 2584, 2722, 3145
TseFI	GTSAC	9 cut(s)	213, 257, 764, 823, 860, 1801, 2086, 2179, 3077
Tsp45I	GTSAC	9 cut(s)	213, 257, 764, 823, 860, 1801, 2086, 2179, 3077
TspGWI	ACGGA	6 cut(s)	561, 1473, 2385, 2645, 2778, 3017
TspMI	CCCGGG	2 cut(s)	2308, 2994
TspRI	CASTG	9 cut(s)	262, 640, 1243, 1501, 1806, 1912, 2584, 2722, 3145
Tth111I	GACNNNGTC	2 cut(s)	226, 1403
Van91I	CCANNNNNTGG	2 cut(s)	2443, 2798
Vha464I	CTTAAG	1 cut(s)	836
VpaK11BI	GGWCC	6 cut(s)	228, 1073, 1289, 2381, 2393, 2774
XagI	CCTNNNNNAGG	1 cut(s)	3051
XapI	RAATTY	2 cut(s)	1548, 2460
XceI	RCATGY	2 cut(s)	1433, 1571
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1322, 2752, 2784
XmaI	CCCGGG	2 cut(s)	2308, 2994
XmiI	GTMKAC	1 cut(s)	2262
XspI	CTAG	3 cut(s)	191, 795, 2058
ZrmI	AGTACT	1 cut(s)	1476
Zsp2I	ATGCAT	1 cut(s)	2587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.