Rmu_ssc0000424.1_g000018

Cell division control protein 48 homolog C-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000424.1
OG0009020
Physical Location & Seq
Reverse (-)
75287 .. 80919
5633 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3270 bp
atggccaacgcaaacaagagccaagtaagaagtcctcaaagcaggagagcccaactcgtagccctcagtcgtcaacgtatagagctcaggagaaccagccgtctaaagcagaagaccaagaagaatatgatgaaggagttgagccaacaacaacttggaggagttggggccaaaaggccgaggattaatcacggctcctgtgatgatattgatgacgacgaggcagggtcgtcatccgttgaatgtactgatttgttaagttcgtcactgcaagcgagttacagggaattgaaccagaagaagaagaggaagaatgtggaatcggagcgagccgttcccgaaagtcggagagaagcagaccagagtgatgccgaggaggcagggccatcggttgtgaggttcagtgactttggaggcatagacaaggtgatagaggagctcaacaaggaggtcattgtgccttttagccatcataagctgggagcttacctgctaggtaagccaatgccgatgcctggaatattgctgtccggaccacccggctgtggcaagactaaattggctcatgctattgccaatgaaactagctctaccttccacaagatttcagccccctcactcgtctccagctttacaggtggatctgaagacatgataagaaggctgtttcataaagcttatcagactgctccgtcagttgtgtttattgatgagattgatgtgattgcttccaaaagagaggatttaaaagcagcggaacagaggattgtggcacaacttcttacctgcatggacaaagtgaattcaaaatctggccgtgttattgtgattggagctaccaacaggccggatgctattgaccctgctctaagaaggccagggcgttttgaccttgagtttgtcttaggcgctccggatgaaaaggccaggtgccacattctttctctgcttctaaaacatccaagacttgaaggttcatttgatcttcataaactagccagggctacatctgggtttgttggagctgatttggaaacactggtcatcaaggctgtcaagattgcggagaataggattgcaaacaacaagaaggctgataggtctatatatgcacctgaagaaatgaaaaactactccatctgtatgactgattttgaggaagcagttcaagctattcagccttctttaaaaagagaaggattcaatgcaattcctgatgtgaaattggaggatgttggtgggcaggattcattaaagcaggaatttcttgaatttattgttaggcctattaaataccctgcattctatgagggagaagacttagagacaggtgttttgctctacggacctccaggatgtggtaaaacactgatagcaaaggctgttgctaatgaggctggtgctagtttcattcacattaaggtggactctataacaactaaggagagcgaagggtcatgggttgttcagcggctattgaagcagtttcttatagagtttgatggtggagagaagcggcaaggtgtatttataattggtgccactaatagacccgatcaaatggaccctgctattttacggtccggaaggttcggtaaacaaatacttgtctccctgcccgataaagacgagcgtggttcaatcttgaaagctcttgcaaggaaaaaacatatagatcccagcgtagatctgtgtgagattgcacaaggatgtgaaaacttcagtggagctgatcttgctatgctggttccatatgcaatgctgcgtctttttggctggaaaactactcaaccttttgtttcttgtctggagcagaaaattcgttggtaccagaattttggagaggaagaacaaaagactccccgtgaacgctgtgttcaaggatttatggactttgcggcaccgagaagagaagcagagttattgagaactaatattgatgatctcccggagattttattggttgaaattctgtgtcggcttccctgcaataaactcatattccagtgcaagcttgtgtccaagccttggtacaatctcatatctgctccttcctttgttggccgctatctatgcctccaacgtcaaatgcaaaaccctatccttacaactctaattctattcgatatgaccgacccaatatctctcatcataacgtcggatcatccggtcttcaaaacagctgcaagcgatttcactcttaatttcctcccatgttatcaccaagtcaaacaaattgaagaactagcaaaagaatacccctggagcaactatatgagctggatgctcgaaccaggttccgttgtaccaccagttgtgatagggacttataatgacttggttttatgctgcgcaaccaagcattatcagcgtcattactacctctgcaatccatacaccagacaatgggttcctcttcctcccacccctggggtctaccaccgctcgcttgtggcctttgactgtgatccatactataagtactcaaatgatgatcataatggagatgaagaacaagggactagtactactagtagaacgaattctttcatccttaatgctgagtataagtggaaggttgtgcgactagtaccgaattcatcagatccaaactttcatttcgagatcttctcttctgagacccgtcaatggagagagatagttgtagtatgctctcggccattttcttcattttttagtgatgtattctttctcattgggaaaactacatcttccgtagcttacaatggaatgttgtacttgtggtgccataatgaccttatacttgagttggatctgtccaaatccaatcctgttaagtaccgttgcattgagccgcctgaggatttttcaaatggaggagggggaagagggtggctaggagtgagcggagggcgtctgctgttatgcatggatacagaatttctccctagagatcacgatgaggttctgctgccatttagagttagggagttgaaacaagtagtcaagggcagccaaggcaaactcaaatggttagccgaccgtgttactatagcttgcaaagatagtgaggtccccaatccaaacacgattagcgtgctcgccttccacccaaacaatgaggatgtcgtgtgtttgagtctataccgtaaaattatcgcgtgcaaccttcgtggaggaacgttagagacaactacagagagtaaaataaagggagtcgagaagaacttgtactatccgttttctcttccatggtggcctaccccagttcctaagactctagagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
AAA Nucleolin_bd

Protein Analysis

1089

Amino Acids

122.57

Weight (kDa)

7.98

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RuvB_N PF05496 172 - 291 1.1e-07 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 174 - 302 7e-41 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 327 - 361 2.2e-07 AAA+ lid domain
AAA PF00004 445 - 481 3.2e-10 ATPase family associated with various cellular activities (AAA)
AAA PF00004 475 - 538 8.5e-10 ATPase family associated with various cellular activities (AAA)
b-prop_At3g26010-like PF24750 773 - 1061 1.6e-08 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1532, 2331
AasI GACNNNNNNGTC 1 cut(s) 691
Acc16I TGCGCA 1 cut(s) 2353
Acc36I ACCTGC 2 cut(s) 498, 794
Acc65I GGTACC 1 cut(s) 1827
AccB1I GGYRCC 5 cut(s) 930, 1538, 1827, 1900, 2766
AccB7I CCANNNNNTGG 3 cut(s) 1358, 2028, 2406
AccBSI CCGCTC 2 cut(s) 2445, 2889
AccI GTMKAC 1 cut(s) 2436
AccII CGCG 1 cut(s) 3143
AccIII TCCGGA 3 cut(s) 530, 913, 1583
AciI CCGC 9 cut(s) 755, 1064, 1471, 1516, 1898, 2065, 2443, 2837, 2889
AclI AACGTT 1 cut(s) 3164
AclWI GGATC 6 cut(s) 649, 1670, 2169, 2462, 2600, 2802
AcoI YGGCCR 4 cut(s) 3, 814, 2062, 2678
AcsI RAATTY 9 cut(s) 802, 1262, 1271, 1818, 1834, 1968, 2542, 2596, 2921
AcuI CTGAAG 3 cut(s) 666, 1137, 1705
AcyI GRCGYC 1 cut(s) 2896
AfiI CCNNNNNNNGG 9 cut(s) 345, 515, 545, 1358, 2028, 2406, 2429, 2430, 2649
AhlI ACTAGT 3 cut(s) 2522, 2531, 2587
AjnI CCWGG 8 cut(s) 514, 877, 926, 998, 1351, 2261, 2293, 2428
Alw21I GWGCWC 3 cut(s) 87, 441, 3084
Alw26I GTCTC 5 cut(s) 628, 1319, 1615, 2633, 3164
AlwI GGATC 6 cut(s) 649, 1670, 2169, 2462, 2600, 2802
Aor13HI TCCGGA 3 cut(s) 530, 913, 1583
ApeKI GCWGC 6 cut(s) 752, 1762, 2183, 2349, 2953, 2994
ApoI RAATTY 9 cut(s) 802, 1262, 1271, 1818, 1834, 1968, 2542, 2596, 2921
ArsI GACNNNNNNTTYG 4 cut(s) 881, 913, 1318, 1350
AseI ATTAAT 1 cut(s) 186
Asp700I GAANNNNTTC 3 cut(s) 1164, 2542, 2546
Asp718I GGTACC 1 cut(s) 1827
AspLEI GCGC 2 cut(s) 911, 2354
AspS9I GGNCC 7 cut(s) 168, 383, 533, 1346, 1564, 1581, 3055
AsuC2I CCSGG 2 cut(s) 540, 1949
AsuHPI GGTGA 2 cut(s) 439, 2213
AvaII GGWCC 5 cut(s) 533, 1346, 1564, 1581, 3055
AxyI CCTNAGG 1 cut(s) 2841
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 5 cut(s) 930, 1538, 1827, 1900, 2766
BanII GRGCYC 3 cut(s) 52, 87, 441
BarI GAAGNNNNNNTAC 2 cut(s) 3197, 3229
BbsI GAAGAC 4 cut(s) 119, 654, 1323, 2164
Bbv12I GWGCWC 3 cut(s) 87, 441, 3084
BbvI GCAGC 6 cut(s) 764, 1749, 2170, 2336, 2940, 3006
BccI CCATC 4 cut(s) 394, 477, 1145, 1496
BceAI ACGGC 4 cut(s) 84, 208, 317, 801
BcgI CGANNNNNNTGC 6 cut(s) 369, 403, 1802, 1836, 3061, 3095
BciT130I CCWGG 8 cut(s) 516, 879, 928, 1000, 1353, 2263, 2295, 2430
BciVI GTATCC 1 cut(s) 2908
BclI TGATCA 1 cut(s) 2494
BcnI CCSGG 2 cut(s) 540, 1949
BcoDI GTCTC 5 cut(s) 628, 1319, 1615, 2633, 3164
BcuI ACTAGT 3 cut(s) 2522, 2531, 2587
BfmI CTRYAG 2 cut(s) 3033, 3177
BfoI RGCGCY 1 cut(s) 912
BfuAI ACCTGC 2 cut(s) 498, 794
BfuI GTATCC 1 cut(s) 2908
BglI GCCNNNNNGGC 1 cut(s) 377
BglII AGATCT 2 cut(s) 1687, 2625
BmcAI AGTACT 2 cut(s) 2483, 2527
Bme18I GGWCC 5 cut(s) 533, 1346, 1564, 1581, 3055
BmgT120I GGNCC 7 cut(s) 168, 383, 533, 1346, 1564, 1581, 3055
BmrI ACTGGG 1 cut(s) 3242
BmsI GCATC 4 cut(s) 358, 501, 841, 2274
BmuI ACTGGG 1 cut(s) 3242
BpiI GAAGAC 4 cut(s) 119, 654, 1323, 2164
BplI GAGNNNNNCTC 4 cut(s) 39, 71, 2615, 2647
BpmI CTGGAG 4 cut(s) 610, 1335, 1829, 2284
Bpu10I CCTNAGC 1 cut(s) 86
BpuEI CTTGAG 2 cut(s) 914, 2807
BpuMI CCSGG 2 cut(s) 540, 1949
BsaHI GRCGYC 1 cut(s) 2896
BsaI GGTCTC 1 cut(s) 2633
BsaWI WCCGGW 4 cut(s) 530, 913, 1583, 2167
Bsc4I CCNNNNNNNGG 9 cut(s) 345, 515, 545, 1358, 2028, 2406, 2429, 2430, 2649
Bse1I ACTGG 4 cut(s) 1044, 2005, 2312, 3248
Bse21I CCTNAGG 1 cut(s) 2841
Bse3DI GCAATG 1 cut(s) 1764
BseAI TCCGGA 3 cut(s) 530, 913, 1583
BseBI CCWGG 8 cut(s) 516, 879, 928, 1000, 1353, 2263, 2295, 2430
BseLI CCNNNNNNNGG 9 cut(s) 345, 515, 545, 1358, 2028, 2406, 2429, 2430, 2649
BseMI GCAATG 1 cut(s) 1764
BseMII CTCAG 5 cut(s) 79, 100, 2553, 2628, 2832
BseNI ACTGG 4 cut(s) 1044, 2005, 2312, 3248
BseRI GAGGAG 4 cut(s) 174, 389, 449, 2874
BseXI GCAGC 6 cut(s) 764, 1749, 2170, 2336, 2940, 3006
BseYI CCCAGC 2 cut(s) 478, 1679
Bsh1236I CGCG 1 cut(s) 3143
Bsh1285I CGRYCG 1 cut(s) 3025
BshNI GGYRCC 5 cut(s) 930, 1538, 1827, 1900, 2766
BsiEI CGRYCG 1 cut(s) 3025
BsiHKAI GWGCWC 3 cut(s) 87, 441, 3084
BsiSI CCGG 7 cut(s) 531, 540, 848, 914, 1584, 1949, 2168
BslFI GGGAC 3 cut(s) 2338, 2533, 3041
BslI CCNNNNNNNGG 9 cut(s) 345, 515, 545, 1358, 2028, 2406, 2429, 2430, 2649
BsmAI GTCTC 5 cut(s) 628, 1319, 1615, 2633, 3164
BsmBI CGTCTC 1 cut(s) 628
BsmFI GGGAC 3 cut(s) 2338, 2533, 3041
BsmI GAATGC 1 cut(s) 1301
Bso31I GGTCTC 1 cut(s) 2633
Bsp1286I GDGCHC 4 cut(s) 52, 87, 441, 3084
Bsp13I TCCGGA 3 cut(s) 530, 913, 1583
Bsp19I CCATGG 1 cut(s) 3233
BspACI CCGC 9 cut(s) 755, 1064, 1471, 1516, 1898, 2065, 2443, 2837, 2889
BspCNI CTCAG 5 cut(s) 78, 99, 2554, 2629, 2833
BspEI TCCGGA 3 cut(s) 530, 913, 1583
BspFNI CGCG 1 cut(s) 3143
BspMI ACCTGC 2 cut(s) 498, 794
BspPI GGATC 6 cut(s) 649, 1670, 2169, 2462, 2600, 2802
BspT107I GGYRCC 5 cut(s) 930, 1538, 1827, 1900, 2766
BspTNI GGTCTC 1 cut(s) 2633
BsrBI CCGCTC 2 cut(s) 2445, 2889
BsrDI GCAATG 1 cut(s) 1764
BsrI ACTGG 4 cut(s) 1044, 2005, 2312, 3248
BssNI GRCGYC 1 cut(s) 2896
BssT1I CCWWGG 3 cut(s) 2027, 2998, 3233
Bst2UI CCWGG 8 cut(s) 516, 879, 928, 1000, 1353, 2263, 2295, 2430
Bst4CI ACNGT 5 cut(s) 1581, 2465, 2825, 3026, 3131
Bst6I CTCTTC 6 cut(s) 299, 1903, 2421, 2638, 2863, 3234
BstACI GRCGYC 1 cut(s) 2896
BstC8I GCNNGC 9 cut(s) 273, 330, 2012, 2188, 2447, 3040, 3080, 3084, 3145
BstDSI CCRYGG 1 cut(s) 3233
BstFNI CGCG 1 cut(s) 3143
BstH2I RGCGCY 1 cut(s) 912
BstHHI GCGC 2 cut(s) 911, 2354
BstMAI GTCTC 5 cut(s) 628, 1319, 1615, 2633, 3164
BstMCI CGRYCG 1 cut(s) 3025
BstMWI GCNNNNNNNGC 9 cut(s) 377, 499, 1169, 1394, 1480, 1736, 2073, 2368, 3000
BstNI CCWGG 8 cut(s) 516, 879, 928, 1000, 1353, 2263, 2295, 2430
BstSFI CTRYAG 2 cut(s) 3033, 3177
BstUI CGCG 1 cut(s) 3143
BstV1I GCAGC 6 cut(s) 764, 1749, 2170, 2336, 2940, 3006
BstV2I GAAGAC 4 cut(s) 119, 654, 1323, 2164
BstX2I RGATCY 6 cut(s) 641, 1675, 1687, 2605, 2625, 2794
BstXI CCANNNNNNTGG 1 cut(s) 1838
BstYI RGATCY 6 cut(s) 641, 1675, 1687, 2605, 2625, 2794
Bsu36I CCTNAGG 1 cut(s) 2841
BsuI GTATCC 1 cut(s) 2908
BtgI CCRYGG 1 cut(s) 3233
BtsI GCAGTG 1 cut(s) 266
BtsIMutI CAGTG 6 cut(s) 266, 409, 1037, 1367, 1729, 2012
BveI ACCTGC 2 cut(s) 498, 794
Cac8I GCNNGC 9 cut(s) 273, 330, 2012, 2188, 2447, 3040, 3080, 3084, 3145
CfoI GCGC 2 cut(s) 911, 2354
Cfr13I GGNCC 7 cut(s) 168, 383, 533, 1346, 1564, 1581, 3055
CpoI CGGWCCG 1 cut(s) 1581
CseI GACGC 3 cut(s) 1754, 2360, 2885
CsiI ACCWGGT 1 cut(s) 2293
CspCI CAANNNNNGTGG 2 cut(s) 3136, 3171
CspI CGGWCCG 1 cut(s) 1581
CviAII CATG 7 cut(s) 566, 652, 790, 1458, 2214, 2911, 3234
DraI TTTAAA 2 cut(s) 747, 1188
DrdI GACNNNNNNGTC 1 cut(s) 691
DseDI GACNNNNNNGTC 1 cut(s) 691
EaeI YGGCCR 4 cut(s) 3, 814, 2062, 2678
Eam1104I CTCTTC 6 cut(s) 299, 1903, 2421, 2638, 2863, 3234
EarI CTCTTC 6 cut(s) 299, 1903, 2421, 2638, 2863, 3234
Ecl136II GAGCTC 2 cut(s) 85, 439
Eco130I CCWWGG 3 cut(s) 2027, 2998, 3233
Eco147I AGGCCT 1 cut(s) 1285
Eco24I GRGCYC 3 cut(s) 52, 87, 441
Eco31I GGTCTC 1 cut(s) 2633
Eco47I GGWCC 5 cut(s) 533, 1346, 1564, 1581, 3055
Eco53kI GAGCTC 2 cut(s) 85, 439
Eco57I CTGAAG 3 cut(s) 666, 1137, 1705
Eco81I CCTNAGG 1 cut(s) 2841
EcoICRI GAGCTC 2 cut(s) 85, 439
EcoO109I RGGNCCY 1 cut(s) 3055
EcoRI GAATTC 3 cut(s) 802, 2542, 2596
EcoRII CCWGG 8 cut(s) 514, 877, 926, 998, 1351, 2261, 2293, 2428
EcoT14I CCWWGG 3 cut(s) 2027, 2998, 3233
EcoT22I ATGCAT 1 cut(s) 2912
EcoT38I GRGCYC 3 cut(s) 52, 87, 441
ErhI CCWWGG 3 cut(s) 2027, 2998, 3233
Esp3I CGTCTC 1 cut(s) 628
FaeI CATG 7 cut(s) 569, 655, 793, 1461, 2217, 2914, 3237
FaqI GGGAC 3 cut(s) 2338, 2533, 3041
FatI CATG 7 cut(s) 565, 651, 789, 1457, 2213, 2910, 3233
FauNDI CATATG 1 cut(s) 1753
FbaI TGATCA 1 cut(s) 2494
FblI GTMKAC 1 cut(s) 2436
FriOI GRGCYC 3 cut(s) 52, 87, 441
FspI TGCGCA 1 cut(s) 2353
GlaI GCGC 2 cut(s) 910, 2353
GsaI CCCAGC 2 cut(s) 482, 1683
GsuI CTGGAG 4 cut(s) 610, 1335, 1829, 2284
HaeII RGCGCY 1 cut(s) 912
HapII CCGG 7 cut(s) 531, 540, 848, 914, 1584, 1949, 2168
HgaI GACGC 3 cut(s) 1754, 2360, 2885
HhaI GCGC 2 cut(s) 911, 2354
Hin1I GRCGYC 1 cut(s) 2896
Hin1II CATG 7 cut(s) 569, 655, 793, 1461, 2217, 2914, 3237
Hin6I GCGC 2 cut(s) 909, 2352
HinP1I GCGC 2 cut(s) 909, 2352
HincII GTYRAC 1 cut(s) 74
HindII GTYRAC 1 cut(s) 74
HindIII AAGCTT 2 cut(s) 675, 2012
HinfI GANTC 8 cut(s) 320, 1200, 1247, 1427, 1858, 3121, 3198, 3259
HpaII CCGG 7 cut(s) 531, 540, 848, 914, 1584, 1949, 2168
HphI GGTGA 2 cut(s) 439, 2213
Hpy166II GTNNAC 5 cut(s) 74, 1426, 1598, 1868, 2437
Hpy188I TCNGA 7 cut(s) 325, 348, 646, 684, 2161, 2605, 2638
Hpy8I GTNNAC 5 cut(s) 74, 1426, 1598, 1868, 2437
Hpy99I CGWCG 2 cut(s) 221, 2161
HpyCH4III ACNGT 5 cut(s) 1581, 2465, 2825, 3026, 3131
HpyCH4IV ACGT 4 cut(s) 76, 2083, 2156, 3164
HpyF10VI GCNNNNNNNGC 9 cut(s) 377, 499, 1169, 1394, 1480, 1736, 2073, 2368, 3000
HpySE526I ACGT 4 cut(s) 76, 2083, 2156, 3164
Hsp92I GRCGYC 1 cut(s) 2896
Hsp92II CATG 7 cut(s) 569, 655, 793, 1461, 2217, 2914, 3237
HspAI GCGC 2 cut(s) 909, 2352
Kpn2I TCCGGA 3 cut(s) 530, 913, 1583
KpnI GGTACC 1 cut(s) 1831
Ksp22I TGATCA 1 cut(s) 2494
Lsp1109I GCAGC 6 cut(s) 764, 1749, 2170, 2336, 2940, 3006
LweI GCATC 4 cut(s) 358, 501, 841, 2274
MabI ACCWGGT 1 cut(s) 2293
MaeII ACGT 4 cut(s) 76, 2083, 2156, 3164
MaeIII GTNAC 4 cut(s) 264, 278, 404, 3028
MbiI CCGCTC 2 cut(s) 2445, 2889
MflI RGATCY 6 cut(s) 641, 1675, 1687, 2605, 2625, 2794
MhlI GDGCHC 4 cut(s) 52, 87, 441, 3084
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 5 cut(s) 1421, 1852, 3130, 3207, 3253
MmeI TCCRAC 5 cut(s) 326, 1000, 2104, 2139, 2772
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 2912
MroI TCCGGA 3 cut(s) 530, 913, 1583
MroXI GAANNNNTTC 3 cut(s) 1164, 2542, 2546
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 3 cut(s) 1142, 1421, 1708
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 3 cut(s) 755, 1471, 2183
MspI CCGG 7 cut(s) 531, 540, 848, 914, 1584, 1949, 2168
Mva1269I GAATGC 1 cut(s) 1301
MvaI CCWGG 8 cut(s) 516, 879, 928, 1000, 1353, 2263, 2295, 2430
MvnI CGCG 1 cut(s) 3143
MwoI GCNNNNNNNGC 9 cut(s) 377, 499, 1169, 1394, 1480, 1736, 2073, 2368, 3000
NciI CCSGG 2 cut(s) 540, 1949
NcoI CCATGG 1 cut(s) 3233
NdeI CATATG 1 cut(s) 1753
NlaIII CATG 7 cut(s) 569, 655, 793, 1461, 2217, 2914, 3237
NmeAIII GCCGAG 3 cut(s) 204, 397, 2656
NmuCI GTSAC 2 cut(s) 264, 404
NsbI TGCGCA 1 cut(s) 2353
NsiI ATGCAT 1 cut(s) 2912
PasI CCCWGGG 1 cut(s) 2429
PceI AGGCCT 1 cut(s) 1285
PcsI WCGNNNNNNNCGW 1 cut(s) 2130
PctI GAATGC 1 cut(s) 1301
PdmI GAANNNNTTC 3 cut(s) 1164, 2542, 2546
PfeI GAWTC 3 cut(s) 320, 1200, 1247
PflMI CCANNNNNTGG 3 cut(s) 1358, 2028, 2406
PfoI TCCNGGA 2 cut(s) 1351, 1947
PleI GAGTC 5 cut(s) 1421, 1852, 3129, 3206, 3253
PpsI GAGTC 5 cut(s) 1421, 1852, 3129, 3206, 3253
PpuMI RGGWCCY 1 cut(s) 3055
PshBI ATTAAT 1 cut(s) 186
PsiI TTATAA 2 cut(s) 1532, 2331
Psp124BI GAGCTC 2 cut(s) 87, 441
Psp1406I AACGTT 1 cut(s) 3164
Psp5II RGGWCCY 1 cut(s) 3055
Psp6I CCWGG 8 cut(s) 514, 877, 926, 998, 1351, 2261, 2293, 2428
PspFI CCCAGC 2 cut(s) 478, 1679
PspGI CCWGG 8 cut(s) 514, 877, 926, 998, 1351, 2261, 2293, 2428
PspPI GGNCC 7 cut(s) 168, 383, 533, 1346, 1564, 1581, 3055
PspPPI RGGWCCY 1 cut(s) 3055
PsuI RGATCY 6 cut(s) 641, 1675, 1687, 2605, 2625, 2794
PvuII CAGCTG 1 cut(s) 2183
RseI CAYNNNNRTG 3 cut(s) 1142, 1421, 1708
Rsr2I CGGWCCG 1 cut(s) 1581
RsrII CGGWCCG 1 cut(s) 1581
SacI GAGCTC 2 cut(s) 87, 441
Sau96I GGNCC 7 cut(s) 168, 383, 533, 1346, 1564, 1581, 3055
ScaI AGTACT 2 cut(s) 2483, 2527
SchI GAGTC 5 cut(s) 1421, 1852, 3130, 3207, 3253
SduI GDGCHC 4 cut(s) 52, 87, 441, 3084
SexAI ACCWGGT 1 cut(s) 2293
SfaNI GCATC 4 cut(s) 358, 501, 841, 2274
SfcI CTRYAG 2 cut(s) 3033, 3177
SinI GGWCC 5 cut(s) 533, 1346, 1564, 1581, 3055
SmiMI CAYNNNNRTG 3 cut(s) 1142, 1421, 1708
SmlI CTYRAG 2 cut(s) 893, 2786
SmoI CTYRAG 2 cut(s) 893, 2786
SpeI ACTAGT 3 cut(s) 2522, 2531, 2587
SseBI AGGCCT 1 cut(s) 1285
SsiI CCGC 9 cut(s) 755, 1064, 1471, 1516, 1898, 2065, 2443, 2837, 2889
SspI AATATT 2 cut(s) 522, 1936
SstI GAGCTC 2 cut(s) 87, 441
StuI AGGCCT 1 cut(s) 1285
StyI CCWWGG 3 cut(s) 2027, 2998, 3233
TaaI ACNGT 5 cut(s) 1581, 2465, 2825, 3026, 3131
TaiI ACGT 4 cut(s) 79, 2086, 2159, 3167
TaqI TCGA 4 cut(s) 2124, 2289, 2622, 3201
TaqII GACCGA 1 cut(s) 2147
TatI WGTACW 5 cut(s) 245, 2481, 2525, 2757, 3213
TauI GCSGC 5 cut(s) 1474, 1519, 1901, 2067, 2839
TfiI GAWTC 3 cut(s) 320, 1200, 1247
TscAI CASTG 6 cut(s) 273, 409, 1044, 1374, 1729, 2012
TseFI GTSAC 2 cut(s) 264, 404
TseI GCWGC 6 cut(s) 752, 1762, 2183, 2349, 2953, 2994
Tsp45I GTSAC 2 cut(s) 264, 404
TspGWI ACGGA 6 cut(s) 226, 681, 1359, 2290, 2725, 3210
TspRI CASTG 6 cut(s) 273, 409, 1044, 1374, 1729, 2012
Van91I CCANNNNNTGG 3 cut(s) 1358, 2028, 2406
VpaK11BI GGWCC 5 cut(s) 533, 1346, 1564, 1581, 3055
VspI ATTAAT 1 cut(s) 186
XapI RAATTY 9 cut(s) 802, 1262, 1271, 1818, 1834, 1968, 2542, 2596, 2921
XbaI TCTAGA 1 cut(s) 3262
XcmI CCANNNNNNNNNTGG 1 cut(s) 152
XmiI GTMKAC 1 cut(s) 2436
XmnI GAANNNNTTC 3 cut(s) 1164, 2542, 2546
ZrmI AGTACT 2 cut(s) 2483, 2527
Zsp2I ATGCAT 1 cut(s) 2912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.