Hypersensitive-induced response protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g30440 |
| rosa_chinensis | RchiOBHm_Chr2g0169131 |
| rosa_multiflora | Rmu_ssc0000440.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00082410 |
| rosa_rugosa | Rorug02G0537200 Rorug02G0537300 |
| rosa_samantha | Rh2CG590700 Rh2DG632600 |
| rosa_wichuraiana | Rw2G050510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 159 |
| AcuI | CTGAAG | 1 cut(s) | 68 |
| AdeI | CACNNNGTG | 1 cut(s) | 149 |
| AgsI | TTSAA | 6 cut(s) | 26, 224, 293, 356, 386, 398 |
| AluBI | AGCT | 5 cut(s) | 380, 497, 511, 521, 547 |
| AluI | AGCT | 5 cut(s) | 380, 497, 511, 521, 547 |
| Alw26I | GTCTC | 1 cut(s) | 428 |
| ApeKI | GCWGC | 2 cut(s) | 494, 497 |
| ApoI | RAATTY | 1 cut(s) | 159 |
| AspLEI | GCGC | 1 cut(s) | 531 |
| AsuC2I | CCSGG | 1 cut(s) | 90 |
| AsuHPI | GGTGA | 2 cut(s) | 146, 515 |
| BbvI | GCAGC | 2 cut(s) | 484, 506 |
| BccI | CCATC | 3 cut(s) | 68, 241, 291 |
| BcnI | CCSGG | 1 cut(s) | 90 |
| BcoDI | GTCTC | 1 cut(s) | 428 |
| BisI | GCNGC | 2 cut(s) | 495, 498 |
| BlsI | GCNGC | 2 cut(s) | 496, 499 |
| Bme1390I | CCNGG | 1 cut(s) | 90 |
| BmrFI | CCNGG | 1 cut(s) | 90 |
| BmsI | GCATC | 2 cut(s) | 244, 334 |
| BpuMI | CCSGG | 1 cut(s) | 90 |
| BsaI | GGTCTC | 1 cut(s) | 428 |
| BsaJI | CCNNGG | 1 cut(s) | 107 |
| Bse118I | RCCGGY | 1 cut(s) | 131 |
| Bse3DI | GCAATG | 2 cut(s) | 411, 486 |
| BseDI | CCNNGG | 1 cut(s) | 107 |
| BseGI | GGATG | 2 cut(s) | 259, 349 |
| BseMI | GCAATG | 2 cut(s) | 411, 486 |
| BseXI | GCAGC | 2 cut(s) | 484, 506 |
| BsiSI | CCGG | 2 cut(s) | 90, 132 |
| BsmAI | GTCTC | 1 cut(s) | 428 |
| BsmI | GAATGC | 1 cut(s) | 496 |
| Bso31I | GGTCTC | 1 cut(s) | 428 |
| Bsp143I | GATC | 1 cut(s) | 391 |
| BspTNI | GGTCTC | 1 cut(s) | 428 |
| BsrDI | GCAATG | 2 cut(s) | 411, 486 |
| BsrFI | RCCGGY | 1 cut(s) | 131 |
| BssAI | RCCGGY | 1 cut(s) | 131 |
| BssECI | CCNNGG | 1 cut(s) | 107 |
| BssMI | GATC | 1 cut(s) | 391 |
| BssT1I | CCWWGG | 1 cut(s) | 107 |
| Bst6I | CTCTTC | 1 cut(s) | 351 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 410 |
| BstC8I | GCNNGC | 1 cut(s) | 533 |
| BstDEI | CTNAG | 1 cut(s) | 186 |
| BstF5I | GGATG | 2 cut(s) | 259, 349 |
| BstHHI | GCGC | 1 cut(s) | 531 |
| BstKTI | GATC | 1 cut(s) | 394 |
| BstMAI | GTCTC | 1 cut(s) | 428 |
| BstMBI | GATC | 1 cut(s) | 391 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 317, 326, 410 |
| BstSCI | CCNGG | 1 cut(s) | 88 |
| BstV1I | GCAGC | 2 cut(s) | 484, 506 |
| BtsCI | GGATG | 2 cut(s) | 259, 349 |
| BtsI | GCAGTG | 1 cut(s) | 143 |
| BtsIMutI | CAGTG | 2 cut(s) | 143, 313 |
| Cac8I | GCNNGC | 1 cut(s) | 533 |
| CfoI | GCGC | 1 cut(s) | 531 |
| Cfr10I | RCCGGY | 1 cut(s) | 131 |
| DdeI | CTNAG | 1 cut(s) | 186 |
| DpnI | GATC | 1 cut(s) | 393 |
| DpnII | GATC | 1 cut(s) | 391 |
| DraI | TTTAAA | 1 cut(s) | 169 |
| DraIII | CACNNNGTG | 1 cut(s) | 149 |
| Eam1104I | CTCTTC | 1 cut(s) | 351 |
| EarI | CTCTTC | 1 cut(s) | 351 |
| Eco130I | CCWWGG | 1 cut(s) | 107 |
| Eco31I | GGTCTC | 1 cut(s) | 428 |
| Eco57I | CTGAAG | 1 cut(s) | 68 |
| EcoT14I | CCWWGG | 1 cut(s) | 107 |
| ErhI | CCWWGG | 1 cut(s) | 107 |
| FaiI | YATR | 7 cut(s) | 123, 264, 300, 371, 417, 423, 452 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 378, 410, 531 |
| Fnu4HI | GCNGC | 2 cut(s) | 495, 498 |
| FokI | GGATG | 2 cut(s) | 266, 356 |
| Fsp4HI | GCNGC | 2 cut(s) | 495, 498 |
| GlaI | GCGC | 1 cut(s) | 530 |
| GluI | GCNGC | 2 cut(s) | 495, 498 |
| HapII | CCGG | 2 cut(s) | 90, 132 |
| HhaI | GCGC | 1 cut(s) | 531 |
| Hin6I | GCGC | 1 cut(s) | 529 |
| HinP1I | GCGC | 1 cut(s) | 529 |
| HindIII | AAGCTT | 1 cut(s) | 509 |
| HinfI | GANTC | 2 cut(s) | 289, 464 |
| HpaII | CCGG | 2 cut(s) | 90, 132 |
| HphI | GGTGA | 2 cut(s) | 146, 515 |
| Hpy188I | TCNGA | 2 cut(s) | 119, 288 |
| Hpy188III | TCNNGA | 2 cut(s) | 271, 395 |
| HpyCH4V | TGCA | 3 cut(s) | 154, 494, 500 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 317, 326, 410 |
| HpyF3I | CTNAG | 1 cut(s) | 186 |
| HspAI | GCGC | 1 cut(s) | 529 |
| Kzo9I | GATC | 1 cut(s) | 391 |
| LmnI | GCTCC | 2 cut(s) | 55, 544 |
| LpnPI | CCDG | 5 cut(s) | 103, 145, 301, 471, 539 |
| Lsp1109I | GCAGC | 2 cut(s) | 484, 506 |
| LweI | GCATC | 2 cut(s) | 244, 334 |
| MaeIII | GTNAC | 1 cut(s) | 208 |
| MalI | GATC | 1 cut(s) | 393 |
| MboI | GATC | 1 cut(s) | 391 |
| MboII | GAAGA | 3 cut(s) | 368, 373, 484 |
| MluCI | AATT | 3 cut(s) | 159, 224, 338 |
| MmeI | TCCRAC | 1 cut(s) | 315 |
| MnlI | CCTC | 5 cut(s) | 45, 86, 130, 244, 449 |
| MseI | TTAA | 1 cut(s) | 168 |
| MspA1I | CMGCKG | 1 cut(s) | 497 |
| MspI | CCGG | 2 cut(s) | 90, 132 |
| MspR9I | CCNGG | 1 cut(s) | 90 |
| Mva1269I | GAATGC | 1 cut(s) | 496 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 317, 326, 410 |
| NciI | CCSGG | 1 cut(s) | 90 |
| NdeII | GATC | 1 cut(s) | 391 |
| NmuCI | GTSAC | 1 cut(s) | 208 |
| PctI | GAATGC | 1 cut(s) | 496 |
| PfeI | GAWTC | 2 cut(s) | 289, 464 |
| PkrI | GCNGC | 2 cut(s) | 496, 499 |
| PvuII | CAGCTG | 1 cut(s) | 497 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| SatI | GCNGC | 2 cut(s) | 495, 498 |
| Sau3AI | GATC | 1 cut(s) | 391 |
| ScrFI | CCNGG | 1 cut(s) | 90 |
| SetI | ASST | 9 cut(s) | 45, 97, 141, 270, 382, 499, 513, 523, 549 |
| SfaNI | GCATC | 2 cut(s) | 244, 334 |
| Sse9I | AATT | 3 cut(s) | 159, 224, 338 |
| StyD4I | CCNGG | 1 cut(s) | 88 |
| StyI | CCWWGG | 1 cut(s) | 107 |
| TaqI | TCGA | 1 cut(s) | 447 |
| TasI | AATT | 3 cut(s) | 159, 224, 338 |
| TfiI | GAWTC | 2 cut(s) | 289, 464 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TscAI | CASTG | 2 cut(s) | 150, 313 |
| TseFI | GTSAC | 1 cut(s) | 208 |
| TseI | GCWGC | 2 cut(s) | 494, 497 |
| Tsp45I | GTSAC | 1 cut(s) | 208 |
| TspDTI | ATGAA | 2 cut(s) | 138, 497 |
| TspRI | CASTG | 2 cut(s) | 150, 313 |
| XapI | RAATTY | 1 cut(s) | 159 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 337 |