Rroxscaffold_1G00016610

phosphatase 2C

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
20572772 .. 20576003
3232 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00016610.1

Sequence Viewer

Length: 2067 bp
ATGGGCAACAGCTTTGGAAAAGTTAGCGTCTGCTTCACCGGCGCTAAAGGAGTTCATCATCGAACCCAAGATGAACCGGTTGTATTATCCGACACCTACGACGAGGGCCTCGGCCACTCTTTCTGCTACGTCCGACCCGACCCGACCTGGCTGGCCTCTTCTAAAGTCCACTCCGAGGAGGCCACCACCTTCAAAACCATCTCCGGAGCTTCGGTCAGCGCCAACACGTCGACGCCTCTGTCCACGGCCGTCGTCGATCTCTACTCTTACAACAGCATCGATCGGGCGGCGGCTTTCGAGTCCTCGACCTCTTTCGCCTCGATTCCGCTGCAGCCCATCCCGCGAAATCTCATCAATTCGGGTCCGATTTCGGGGAACTTCGGAGCCGGGATCCCCGGGTCGGGTCCGCTCGAGCGAGGGTTCCTGTCCGGCCCAATCGAGCGGGCGTTCATGTCCGGCCCGCTCGACCGTGGGCTGTTCTCCGGGCCCATGGAGAAGGGGTACTCGGAGCAGTTTCAGAGGAGCTTCTCCCACGGCGGCGGGTTCGCTTTTAAGCCGAGATCGGGGAAGCGGAAACTGATTCGGGTTCTTCAGAGAGCGATATCGAAGACGATATATCGCGGCCAGAACTCGATTCTGGCGCCGATTAAAAACCGCGTCGTTTCGGTGAAAGATCAGGATTGGATCGTTGGCGGCGGCGGCGGCGGCGGAGGACTACAAGATAGTAAGCTTCAAAATCACAATGAGAATTTGACTGTGAGCTCTGTGAATTTCAGCAGTGAGGGGAGTTTGGAAGACGACGAGTCGTTGTCGAGTCAAAATCTTCAGTGGGCGCAAGGGAAAGCAGGGGAGGATCGAGTCCACGTCGTCGTTTCGGAGGAGGACGGCTGGGTTTTCGTCGGAATCTACGATGGTTTCAACGGCCCAGATGCGCCGGATTATCTTCTATCGAATTTGTACACAGCTGTCCATAAGGAGCTGAAAGGGTTGATTTGGGACGAGAGGCTTGAATCAGCTGCGGTGGCCGCGCCTGCGACTTCTCCTGTTCACCCAGAATATTCGGATTCGGTTTCGGTTTCGATTTCGATTTCGGATAGTGATTTGGGAAGGAATCAAGTGGCAGATGCTTGTTCTCAGTTTGTTGAGGAAGAGAATTATCCTTGTGCAAGTGGGGATGTGAATTTCGATTCCAATTCCAAGAAGAGGGAGTCCAGGAACCCGAAAACAAAGTACCGGAGCTCCGGTCGGAAATGGGAGGATAATCAGAGGAGGTGGAGGTGTGAATGGGATAGAGAGAGAGTTGAGCTTGATCGGAGATTGAAGGAACAGCTTAATAGGTCCAGCGCAGATGGGTCAACAGCTACTAACCACTCCGATGTTTTGAAGGCTTTGTCTCAAGCTTTGAGGAAAACAGAGGAGGCCTATTTGGAAGTTGCTGATAAAATGCTCTTGGAAAATCCTGAGTTGGCCTTGATGGGGTCTTGTGTTCTTGTGATGTTGATGAAGGGGGAAGATGTTTATGTGATGAATGTGGGTGATAGTCGGGTTGTTTTGGCCCAGAAGGCGGAACCGGATTATTGGCTTGGGAAGATTAGGCAGGATTTGGAGAGGATCAATGAGGAAACATTACATGATCTTGAGGACGGCGAAAGACGGAATGCAATTCCCAATTTGAGCGCTGTTCAGCTGACGATGGATCACAGTACTAGCGAGCAAGAGGAAGTTCATAGAATCCGAAATGAACACCCAGAGGATGCTTGTGCTGTCATGAATGATCGTGTTAAAGGTTCATTGAAGGTCACTAGAGCTTTTGGTGCCGGCTTTCTCAAACAGTACTTCACGAACGAAGAAGCTGTTTCTGAAGTTGAACTTTTCATCACATTACAACCTGAAGGAGATCCGGCACAGCATCTTGTAGAGGAAGTATTGTTTCGTGCTGCCAAAAAAGCTGGTATGGACTTCCACGAATTGCTTCAAATACCACAAGGGGATCGGAGGCGGTACCATGATGATGTTTCCATCATCGTTATTTCTTTAGAGGGAAGAATATGGAGATCATGTGTATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

688

Amino Acids

76.09

Weight (kDa)

5.35

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 454 - 623 9.4e-17 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010729)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 238
Acc65I GGTACC 1 cut(s) 2001
AccB1I GGYRCC 3 cut(s) 640, 1814, 2001
AccBSI CCGCTC 3 cut(s) 409, 442, 463
AccI GTMKAC 1 cut(s) 230
AccII CGCG 4 cut(s) 343, 621, 657, 1028
AccIII TCCGGA 1 cut(s) 203
AclWI GGATC 8 cut(s) 385, 398, 692, 861, 1619, 1704, 1892, 1998
AcoI YGGCCR 4 cut(s) 112, 246, 622, 1023
AcsI RAATTY 4 cut(s) 748, 769, 952, 1180
AcuI CTGAAG 4 cut(s) 575, 809, 1881, 1911
AcyI GRCGYC 2 cut(s) 233, 641
AfaI GTAC 6 cut(s) 503, 959, 1232, 1705, 1835, 2003
AfeI AGCGCT 1 cut(s) 1678
AfiI CCNNNNNNNGG 8 cut(s) 175, 371, 400, 401, 563, 1203, 1476, 1564
AflIII ACRYGT 1 cut(s) 225
AgeI ACCGGT 1 cut(s) 76
AgsI TTSAA 9 cut(s) 193, 734, 919, 1010, 1321, 1384, 1795, 1868, 1976
AhdI GACNNNNNGTC 1 cut(s) 802
AjiI CACGTC 2 cut(s) 228, 865
AjnI CCWGG 2 cut(s) 146, 1211
Alw21I GWGCWC 2 cut(s) 764, 1241
Alw26I GTCTC 1 cut(s) 1398
AlwI GGATC 8 cut(s) 385, 398, 692, 861, 1619, 1704, 1892, 1998
Ama87I CYCGRG 2 cut(s) 395, 410
Aor13HI TCCGGA 1 cut(s) 203
Aor51HI AGCGCT 1 cut(s) 1678
ApaI GGGCCC 1 cut(s) 489
ApeKI GCWGC 4 cut(s) 328, 331, 1016, 1937
ApoI RAATTY 4 cut(s) 748, 769, 952, 1180
AsiGI ACCGGT 1 cut(s) 76
Asp700I GAANNNNTTC 1 cut(s) 1971
Asp718I GGTACC 1 cut(s) 2001
AspLEI GCGC 8 cut(s) 44, 221, 643, 835, 934, 1030, 1346, 1679
AsuC2I CCSGG 4 cut(s) 388, 396, 397, 484
AsuHPI GGTGA 4 cut(s) 28, 679, 1040, 1547
AvaI CYCGRG 2 cut(s) 395, 410
AvaII GGWCC 3 cut(s) 362, 404, 1338
BaeGI GKGCMC 1 cut(s) 489
BamHI GGATCC 1 cut(s) 390
BanI GGYRCC 3 cut(s) 640, 1814, 2001
BanII GRGCYC 3 cut(s) 489, 764, 1241
BbsI GAAGAC 2 cut(s) 614, 801
Bbv12I GWGCWC 2 cut(s) 764, 1241
BbvI GCAGC 4 cut(s) 315, 343, 1003, 1924
BccI CCATC 7 cut(s) 206, 344, 905, 1343, 1468, 1687, 2027
BceAI ACGGC 6 cut(s) 233, 261, 550, 901, 937, 1660
BcgI CGANNNNNNTGC 2 cut(s) 310, 344
BciT130I CCWGG 2 cut(s) 148, 1213
BcnI CCSGG 4 cut(s) 388, 396, 397, 484
BcoDI GTCTC 1 cut(s) 1398
BfaI CTAG 2 cut(s) 1707, 1803
BfmI CTRYAG 1 cut(s) 329
BfoI RGCGCY 4 cut(s) 45, 222, 644, 1680
BglI GCCNNNNNGGC 1 cut(s) 1562
BmcAI AGTACT 2 cut(s) 1705, 1835
Bme1390I CCNGG 6 cut(s) 148, 388, 396, 397, 484, 1213
Bme18I GGWCC 3 cut(s) 362, 404, 1338
BmeRI GACNNNNNGTC 1 cut(s) 802
BmeT110I CYCGRG 2 cut(s) 395, 410
BmgBI CACGTC 2 cut(s) 228, 865
BmrFI CCNGG 6 cut(s) 148, 388, 396, 397, 484, 1213
BmsI GCATC 5 cut(s) 285, 919, 1114, 1744, 1918
BpiI GAAGAC 2 cut(s) 614, 801
BpuEI CTTGAG 2 cut(s) 1380, 1658
BpuMI CCSGG 4 cut(s) 388, 396, 397, 484
Bsa29I ATCGAT 1 cut(s) 279
BsaHI GRCGYC 2 cut(s) 233, 641
BsaJI CCNNGG 8 cut(s) 109, 174, 243, 394, 395, 469, 489, 532
BsaWI WCCGGW 5 cut(s) 76, 203, 1233, 1241, 1570
BsaXI ACNNNNNCTCC 9 cut(s) 198, 228, 485, 515, 1223, 1228, 1253, 1258, 2044
Bsc4I CCNNNNNNNGG 8 cut(s) 175, 371, 400, 401, 563, 1203, 1476, 1564
Bse118I RCCGGY 3 cut(s) 38, 76, 1817
BseAI TCCGGA 1 cut(s) 203
BseBI CCWGG 2 cut(s) 148, 1213
BseCI ATCGAT 1 cut(s) 279
BseDI CCNNGG 8 cut(s) 109, 174, 243, 394, 395, 469, 489, 532
BseGI GGATG 3 cut(s) 336, 1180, 1759
BseLI CCNNNNNNNGG 8 cut(s) 175, 371, 400, 401, 563, 1203, 1476, 1564
BseMII CTCAG 2 cut(s) 1148, 1452
BseRI GAGGAG 5 cut(s) 191, 535, 893, 1282, 1430
BseSI GKGCMC 1 cut(s) 489
BseX3I CGGCCG 1 cut(s) 246
BseXI GCAGC 4 cut(s) 315, 343, 1003, 1924
BseYI CCCAGC 1 cut(s) 888
Bsh1236I CGCG 4 cut(s) 343, 621, 657, 1028
Bsh1285I CGRYCG 4 cut(s) 249, 283, 469, 1246
BshNI GGYRCC 3 cut(s) 640, 1814, 2001
BshTI ACCGGT 1 cut(s) 76
BshVI ATCGAT 1 cut(s) 279
BsiEI CGRYCG 4 cut(s) 249, 283, 469, 1246
BsiHKAI GWGCWC 2 cut(s) 764, 1241
BsiHKCI CYCGRG 2 cut(s) 395, 410
BslFI GGGAC 1 cut(s) 1010
BslI CCNNNNNNNGG 8 cut(s) 175, 371, 400, 401, 563, 1203, 1476, 1564
BsmAI GTCTC 1 cut(s) 1398
BsmFI GGGAC 1 cut(s) 1010
BsmI GAATGC 1 cut(s) 1663
BsoBI CYCGRG 2 cut(s) 395, 410
Bsp120I GGGCCC 1 cut(s) 485
Bsp1286I GDGCHC 3 cut(s) 489, 764, 1241
Bsp13I TCCGGA 1 cut(s) 203
Bsp1407I TGTACA 1 cut(s) 957
Bsp19I CCATGG 1 cut(s) 489
BspCNI CTCAG 2 cut(s) 1147, 1453
BspDI ATCGAT 1 cut(s) 279
BspEI TCCGGA 1 cut(s) 203
BspFNI CGCG 4 cut(s) 343, 621, 657, 1028
BspHI TCATGA 1 cut(s) 1767
BspMAI CTGCAG 1 cut(s) 333
BspPI GGATC 8 cut(s) 385, 398, 692, 861, 1619, 1704, 1892, 1998
BspT107I GGYRCC 3 cut(s) 640, 1814, 2001
BsrBI CCGCTC 3 cut(s) 409, 442, 463
BsrFI RCCGGY 3 cut(s) 38, 76, 1817
BsrGI TGTACA 1 cut(s) 957
BssAI RCCGGY 3 cut(s) 38, 76, 1817
BssECI CCNNGG 8 cut(s) 109, 174, 243, 394, 395, 469, 489, 532
BssNI GRCGYC 2 cut(s) 233, 641
BssT1I CCWWGG 1 cut(s) 489
Bst2UI CCWGG 2 cut(s) 148, 1213
Bst4CI ACNGT 4 cut(s) 470, 757, 1703, 1833
Bst6I CTCTTC 3 cut(s) 163, 1143, 1196
BstACI GRCGYC 2 cut(s) 233, 641
BstAUI TGTACA 1 cut(s) 957
BstC8I GCNNGC 6 cut(s) 153, 444, 461, 1032, 1712, 1819
BstDEI CTNAG 2 cut(s) 1134, 1461
BstDSI CCRYGG 4 cut(s) 243, 469, 489, 532
BstF5I GGATG 3 cut(s) 336, 1180, 1759
BstFNI CGCG 4 cut(s) 343, 621, 657, 1028
BstH2I RGCGCY 4 cut(s) 45, 222, 644, 1680
BstHHI GCGC 8 cut(s) 44, 221, 643, 835, 934, 1030, 1346, 1679
BstMAI GTCTC 1 cut(s) 1398
BstMCI CGRYCG 4 cut(s) 249, 283, 469, 1246
BstNI CCWGG 2 cut(s) 148, 1213
BstSCI CCNGG 6 cut(s) 146, 386, 394, 395, 482, 1211
BstSFI CTRYAG 1 cut(s) 329
BstSLI GKGCMC 1 cut(s) 489
BstUI CGCG 4 cut(s) 343, 621, 657, 1028
BstV1I GCAGC 4 cut(s) 315, 343, 1003, 1924
BstV2I GAAGAC 2 cut(s) 614, 801
BstX2I RGATCY 2 cut(s) 390, 1897
BstYI RGATCY 2 cut(s) 390, 1897
BstZI CGGCCG 1 cut(s) 246
Bsu15I ATCGAT 1 cut(s) 279
BsuTUI ATCGAT 1 cut(s) 279
BtgI CCRYGG 4 cut(s) 243, 469, 489, 532
BtrI CACGTC 2 cut(s) 228, 865
BtsCI GGATG 3 cut(s) 336, 1180, 1759
BtsI GCAGTG 1 cut(s) 784
BtsIMutI CAGTG 2 cut(s) 784, 833
Cac8I GCNNGC 6 cut(s) 153, 444, 461, 1032, 1712, 1819
CciI TCATGA 1 cut(s) 1767
CfoI GCGC 8 cut(s) 44, 221, 643, 835, 934, 1030, 1346, 1679
Cfr10I RCCGGY 3 cut(s) 38, 76, 1817
Cfr9I CCCGGG 1 cut(s) 395
ClaI ATCGAT 1 cut(s) 279
CseI GACGC 3 cut(s) 16, 241, 646
Csp6I GTAC 6 cut(s) 502, 958, 1231, 1704, 1834, 2002
CspAI ACCGGT 1 cut(s) 76
CviAII CATG 6 cut(s) 451, 490, 1631, 1768, 2006, 2058
CviQI GTAC 6 cut(s) 502, 958, 1231, 1704, 1834, 2002
DdeI CTNAG 2 cut(s) 1134, 1461
DinI GGCGCC 1 cut(s) 642
DrdI GACNNNNNNGTC 1 cut(s) 238
DriI GACNNNNNGTC 1 cut(s) 802
DseDI GACNNNNNNGTC 1 cut(s) 238
EaeI YGGCCR 4 cut(s) 112, 246, 622, 1023
EagI CGGCCG 1 cut(s) 246
Eam1104I CTCTTC 3 cut(s) 163, 1143, 1196
Eam1105I GACNNNNNGTC 1 cut(s) 802
EarI CTCTTC 3 cut(s) 163, 1143, 1196
EciI GGCGGA 2 cut(s) 723, 1580
Ecl136II GAGCTC 2 cut(s) 762, 1239
EclXI CGGCCG 1 cut(s) 246
Eco130I CCWWGG 1 cut(s) 489
Eco147I AGGCCT 1 cut(s) 1421
Eco24I GRGCYC 3 cut(s) 489, 764, 1241
Eco32I GATATC 1 cut(s) 603
Eco47I GGWCC 3 cut(s) 362, 404, 1338
Eco47III AGCGCT 1 cut(s) 1678
Eco52I CGGCCG 1 cut(s) 246
Eco53kI GAGCTC 2 cut(s) 762, 1239
Eco57I CTGAAG 4 cut(s) 575, 809, 1881, 1911
Eco88I CYCGRG 2 cut(s) 395, 410
EcoICRI GAGCTC 2 cut(s) 762, 1239
EcoO109I RGGNCCY 1 cut(s) 106
EcoRII CCWGG 2 cut(s) 146, 1211
EcoRV GATATC 1 cut(s) 603
EcoT14I CCWWGG 1 cut(s) 489
EcoT38I GRGCYC 3 cut(s) 489, 764, 1241
EgeI GGCGCC 1 cut(s) 642
EheI GGCGCC 1 cut(s) 642
ErhI CCWWGG 1 cut(s) 489
FaeI CATG 6 cut(s) 454, 493, 1634, 1771, 2009, 2061
FalI AAGNNNNNCTT 2 cut(s) 1854, 1886
FaqI GGGAC 1 cut(s) 1010
FatI CATG 6 cut(s) 450, 489, 1630, 1767, 2005, 2057
FauI CCCGC 4 cut(s) 348, 435, 468, 533
FblI GTMKAC 1 cut(s) 230
FokI GGATG 3 cut(s) 323, 1187, 1766
FriOI GRGCYC 3 cut(s) 489, 764, 1241
FspBI CTAG 2 cut(s) 1707, 1803
GlaI GCGC 8 cut(s) 43, 220, 642, 834, 933, 1029, 1345, 1678
GsaI CCCAGC 1 cut(s) 892
HaeII RGCGCY 4 cut(s) 45, 222, 644, 1680
HgaI GACGC 3 cut(s) 16, 241, 646
HhaI GCGC 8 cut(s) 44, 221, 643, 835, 934, 1030, 1346, 1679
Hin1I GRCGYC 2 cut(s) 233, 641
Hin1II CATG 6 cut(s) 454, 493, 1634, 1771, 2009, 2061
Hin6I GCGC 8 cut(s) 42, 219, 641, 833, 932, 1028, 1344, 1677
HinP1I GCGC 8 cut(s) 42, 219, 641, 833, 932, 1028, 1344, 1677
HincII GTYRAC 2 cut(s) 231, 1356
HindII GTYRAC 2 cut(s) 231, 1356
HindIII AAGCTT 2 cut(s) 728, 1398
HphI GGTGA 4 cut(s) 28, 679, 1040, 1547
Hpy166II GTNNAC 7 cut(s) 169, 231, 243, 862, 960, 1048, 1356
Hpy188III TCNNGA 6 cut(s) 204, 677, 1460, 1637, 1768, 1840
Hpy8I GTNNAC 7 cut(s) 169, 231, 243, 862, 960, 1048, 1356
HpyAV CCTTC 9 cut(s) 199, 490, 1101, 1315, 1378, 1498, 1555, 1789, 1886
HpyCH4III ACNGT 4 cut(s) 470, 757, 1703, 1833
HpyCH4IV ACGT 3 cut(s) 129, 227, 864
HpyCH4V TGCA 3 cut(s) 331, 1166, 1661
HpyF3I CTNAG 2 cut(s) 1134, 1461
HpySE526I ACGT 3 cut(s) 129, 227, 864
Hsp92I GRCGYC 2 cut(s) 233, 641
Hsp92II CATG 6 cut(s) 454, 493, 1634, 1771, 2009, 2061
HspAI GCGC 8 cut(s) 42, 219, 641, 833, 932, 1028, 1344, 1677
KasI GGCGCC 1 cut(s) 640
Kpn2I TCCGGA 1 cut(s) 203
KpnI GGTACC 1 cut(s) 2005
KroI GCCGGC 1 cut(s) 1817
KroNI GCCGGC 1 cut(s) 1819
LmnI GCTCC 7 cut(s) 206, 383, 508, 522, 976, 1236, 1244
Lsp1109I GCAGC 4 cut(s) 315, 343, 1003, 1924
LweI GCATC 5 cut(s) 285, 919, 1114, 1744, 1918
MaeI CTAG 2 cut(s) 1707, 1803
MaeII ACGT 3 cut(s) 129, 227, 864
MaeIII GTNAC 1 cut(s) 1798
MbiI CCGCTC 3 cut(s) 409, 442, 463
MflI RGATCY 2 cut(s) 390, 1897
MhlI GDGCHC 3 cut(s) 489, 764, 1241
Mly113I GGCGCC 1 cut(s) 641
MlyI GAGTC 5 cut(s) 308, 812, 823, 867, 1217
MmeI TCCRAC 4 cut(s) 114, 157, 880, 1226
MroI TCCGGA 1 cut(s) 203
MroNI GCCGGC 1 cut(s) 1817
MroXI GAANNNNTTC 1 cut(s) 1971
MseI TTAA 4 cut(s) 552, 648, 1332, 1782
MslI CAYNNNNRTG 2 cut(s) 1374, 2010
MspA1I CMGCKG 4 cut(s) 328, 965, 1016, 1687
MspR9I CCNGG 6 cut(s) 148, 388, 396, 397, 484, 1213
Mva1269I GAATGC 1 cut(s) 1663
MvaI CCWGG 2 cut(s) 148, 1213
MvnI CGCG 4 cut(s) 343, 621, 657, 1028
NaeI GCCGGC 1 cut(s) 1819
NarI GGCGCC 1 cut(s) 641
NciI CCSGG 4 cut(s) 388, 396, 397, 484
NcoI CCATGG 1 cut(s) 489
NgoMIV GCCGGC 1 cut(s) 1817
NlaIII CATG 6 cut(s) 454, 493, 1634, 1771, 2009, 2061
NmeAIII GCCGAG 2 cut(s) 90, 582
NmuCI GTSAC 1 cut(s) 1798
PaeR7I CTCGAG 1 cut(s) 410
PagI TCATGA 1 cut(s) 1767
PceI AGGCCT 1 cut(s) 1421
PcsI WCGNNNNNNNCGW 2 cut(s) 135, 906
PctI GAATGC 1 cut(s) 1663
PdiI GCCGGC 1 cut(s) 1819
PdmI GAANNNNTTC 1 cut(s) 1971
PfeI GAWTC 9 cut(s) 322, 580, 634, 903, 1010, 1064, 1111, 1187, 1731
PfoI TCCNGGA 1 cut(s) 1211
PinAI ACCGGT 1 cut(s) 76
Ple19I CGATCG 1 cut(s) 283
PleI GAGTC 5 cut(s) 307, 811, 822, 866, 1216
PluTI GGCGCC 1 cut(s) 644
PpsI GAGTC 5 cut(s) 307, 811, 822, 866, 1216
Psp124BI GAGCTC 2 cut(s) 764, 1241
Psp6I CCWGG 2 cut(s) 146, 1211
PspFI CCCAGC 1 cut(s) 888
PspGI CCWGG 2 cut(s) 146, 1211
PspOMI GGGCCC 1 cut(s) 485
PspXI VCTCGAGB 1 cut(s) 410
PstI CTGCAG 1 cut(s) 333
PsuI RGATCY 2 cut(s) 390, 1897
PvuI CGATCG 1 cut(s) 283
PvuII CAGCTG 3 cut(s) 965, 1016, 1687
RsaI GTAC 6 cut(s) 503, 959, 1232, 1705, 1835, 2003
RsaNI GTAC 6 cut(s) 502, 958, 1231, 1704, 1834, 2002
RseI CAYNNNNRTG 2 cut(s) 1374, 2010
SacI GAGCTC 2 cut(s) 764, 1241
SalI GTCGAC 1 cut(s) 229
SaqAI TTAA 4 cut(s) 552, 648, 1332, 1782
ScaI AGTACT 2 cut(s) 1705, 1835
SchI GAGTC 5 cut(s) 308, 812, 823, 867, 1217
ScrFI CCNGG 6 cut(s) 148, 388, 396, 397, 484, 1213
SduI GDGCHC 3 cut(s) 489, 764, 1241
SfaNI GCATC 5 cut(s) 285, 919, 1114, 1744, 1918
SfcI CTRYAG 1 cut(s) 329
SfoI GGCGCC 1 cut(s) 642
Sfr274I CTCGAG 1 cut(s) 410
SgrAI CRCCGGYG 1 cut(s) 38
SgrDI CGTCGACG 1 cut(s) 229
SinI GGWCC 3 cut(s) 362, 404, 1338
SlaI CTCGAG 1 cut(s) 410
SmaI CCCGGG 1 cut(s) 397
SmiMI CAYNNNNRTG 2 cut(s) 1374, 2010
SmlI CTYRAG 3 cut(s) 410, 1395, 1637
SmoI CTYRAG 3 cut(s) 410, 1395, 1637
SseBI AGGCCT 1 cut(s) 1421
SspDI GGCGCC 1 cut(s) 640
SspI AATATT 1 cut(s) 1058
SspMI CTAG 2 cut(s) 1707, 1803
SstI GAGCTC 2 cut(s) 764, 1241
StuI AGGCCT 1 cut(s) 1421
StyD4I CCNGG 6 cut(s) 146, 386, 394, 395, 482, 1211
StyI CCWWGG 1 cut(s) 489
TaaI ACNGT 4 cut(s) 470, 757, 1703, 1833
TaiI ACGT 3 cut(s) 132, 230, 867
TaqII GACCGA 1 cut(s) 202
TatI WGTACW 3 cut(s) 957, 1703, 1833
TfiI GAWTC 9 cut(s) 322, 580, 634, 903, 1010, 1064, 1111, 1187, 1731
Tru1I TTAA 4 cut(s) 552, 648, 1332, 1782
Tru9I TTAA 4 cut(s) 552, 648, 1332, 1782
TscAI CASTG 2 cut(s) 784, 833
TseFI GTSAC 1 cut(s) 1798
TseI GCWGC 4 cut(s) 328, 331, 1016, 1937
Tsp45I GTSAC 1 cut(s) 1798
TspGWI ACGGA 1 cut(s) 1669
TspMI CCCGGG 1 cut(s) 395
TspRI CASTG 2 cut(s) 784, 833
VpaK11BI GGWCC 3 cut(s) 362, 404, 1338
XapI RAATTY 4 cut(s) 748, 769, 952, 1180
XhoI CTCGAG 1 cut(s) 410
XmaI CCCGGG 1 cut(s) 395
XmiI GTMKAC 1 cut(s) 230
XmnI GAANNNNTTC 1 cut(s) 1971
XspI CTAG 2 cut(s) 1707, 1803
ZrmI AGTACT 2 cut(s) 1705, 1835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.