Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g16860 |
| malus_domestica | MD12G1106700.v1.1 |
| prunus_persica | Prupe.7G125600_v2.0.a1 |
| pyrus_communis | pycom12g10720 |
| rosa_chinensis | RchiOBHm_Chr3g0470881 |
| rosa_laevigata | RLG00000024237 |
| rosa_multiflora | Rmu_sc0013860.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00027940 Rroxscaffold_4G00331780 Rroxscaffold_6G00410450 |
| rosa_rugosa | Rorug03G0113300 |
| rosa_samantha | Rh3AG163100 Rh3BG188500 Rh3CG178500 Rh3DG187600 |
| rosa_wichuraiana | Rw3G015360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 191 |
| AclWI | GGATC | 1 cut(s) | 172 |
| AfaI | GTAC | 1 cut(s) | 65 |
| AgsI | TTSAA | 3 cut(s) | 79, 146, 173 |
| AjnI | CCWGG | 1 cut(s) | 204 |
| AluBI | AGCT | 2 cut(s) | 82, 149 |
| AluI | AGCT | 2 cut(s) | 82, 149 |
| AlwI | GGATC | 1 cut(s) | 172 |
| AoxI | GGCC | 1 cut(s) | 202 |
| AspS9I | GGNCC | 1 cut(s) | 202 |
| AsuII | TTCGAA | 2 cut(s) | 26, 128 |
| BciT130I | CCWGG | 1 cut(s) | 206 |
| BfaI | CTAG | 1 cut(s) | 150 |
| Bme1390I | CCNGG | 1 cut(s) | 206 |
| BmgT120I | GGNCC | 1 cut(s) | 202 |
| BmrFI | CCNGG | 1 cut(s) | 206 |
| BmrI | ACTGGG | 1 cut(s) | 51 |
| BmuI | ACTGGG | 1 cut(s) | 51 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 104, 136 |
| Bpu14I | TTCGAA | 2 cut(s) | 26, 128 |
| Bse1I | ACTGG | 1 cut(s) | 46 |
| BseBI | CCWGG | 1 cut(s) | 206 |
| BseNI | ACTGG | 1 cut(s) | 46 |
| BsgI | GTGCAG | 1 cut(s) | 110 |
| BshFI | GGCC | 1 cut(s) | 204 |
| BslFI | GGGAC | 1 cut(s) | 203 |
| BsmFI | GGGAC | 1 cut(s) | 203 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 1 cut(s) | 204 |
| Bsp119I | TTCGAA | 2 cut(s) | 26, 128 |
| Bsp143I | GATC | 1 cut(s) | 164 |
| BspACI | CCGC | 1 cut(s) | 191 |
| BspANI | GGCC | 1 cut(s) | 204 |
| BspPI | GGATC | 1 cut(s) | 172 |
| BspT104I | TTCGAA | 2 cut(s) | 26, 128 |
| BsrI | ACTGG | 1 cut(s) | 46 |
| BssMI | GATC | 1 cut(s) | 164 |
| Bst2UI | CCWGG | 1 cut(s) | 206 |
| BstBI | TTCGAA | 2 cut(s) | 26, 128 |
| BstC8I | GCNNGC | 1 cut(s) | 193 |
| BstKTI | GATC | 1 cut(s) | 167 |
| BstMBI | GATC | 1 cut(s) | 164 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 88, 201 |
| BstNI | CCWGG | 1 cut(s) | 206 |
| BstSCI | CCNGG | 1 cut(s) | 204 |
| BstX2I | RGATCY | 1 cut(s) | 164 |
| BstYI | RGATCY | 1 cut(s) | 164 |
| BsuRI | GGCC | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 1 cut(s) | 193 |
| Cfr13I | GGNCC | 1 cut(s) | 202 |
| Csp6I | GTAC | 1 cut(s) | 64 |
| CviJI | RGCY | 5 cut(s) | 82, 149, 195, 204, 214 |
| CviKI_1 | RGCY | 5 cut(s) | 82, 149, 195, 204, 214 |
| CviQI | GTAC | 1 cut(s) | 64 |
| DpnI | GATC | 1 cut(s) | 166 |
| DpnII | GATC | 1 cut(s) | 164 |
| EcoRII | CCWGG | 1 cut(s) | 204 |
| FaiI | YATR | 1 cut(s) | 48 |
| FaqI | GGGAC | 1 cut(s) | 203 |
| FauI | CCCGC | 1 cut(s) | 184 |
| FspBI | CTAG | 1 cut(s) | 150 |
| HaeIII | GGCC | 1 cut(s) | 204 |
| HindIII | AAGCTT | 1 cut(s) | 80 |
| HinfI | GANTC | 2 cut(s) | 119, 142 |
| Hpy166II | GTNNAC | 1 cut(s) | 103 |
| Hpy8I | GTNNAC | 1 cut(s) | 103 |
| HpyCH4V | TGCA | 3 cut(s) | 32, 91, 155 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 88, 201 |
| Kzo9I | GATC | 1 cut(s) | 164 |
| LpnPI | CCDG | 3 cut(s) | 27, 191, 218 |
| MaeI | CTAG | 1 cut(s) | 150 |
| MalI | GATC | 1 cut(s) | 166 |
| MboI | GATC | 1 cut(s) | 164 |
| MflI | RGATCY | 1 cut(s) | 164 |
| MluCI | AATT | 3 cut(s) | 33, 159, 173 |
| MlyI | GAGTC | 1 cut(s) | 113 |
| MmeI | TCCRAC | 1 cut(s) | 37 |
| MnlI | CCTC | 1 cut(s) | 100 |
| MseI | TTAA | 1 cut(s) | 197 |
| MspR9I | CCNGG | 1 cut(s) | 206 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 1 cut(s) | 206 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 88, 201 |
| NdeII | GATC | 1 cut(s) | 164 |
| NspV | TTCGAA | 2 cut(s) | 26, 128 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PfeI | GAWTC | 1 cut(s) | 142 |
| PflFI | GACNNNGTC | 1 cut(s) | 107 |
| PleI | GAGTC | 1 cut(s) | 113 |
| PpsI | GAGTC | 1 cut(s) | 113 |
| Psp6I | CCWGG | 1 cut(s) | 204 |
| PspGI | CCWGG | 1 cut(s) | 204 |
| PspPI | GGNCC | 1 cut(s) | 202 |
| PsuI | RGATCY | 1 cut(s) | 164 |
| PsyI | GACNNNGTC | 1 cut(s) | 107 |
| RsaI | GTAC | 1 cut(s) | 65 |
| RsaNI | GTAC | 1 cut(s) | 64 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| Sau3AI | GATC | 1 cut(s) | 164 |
| Sau96I | GGNCC | 1 cut(s) | 202 |
| SchI | GAGTC | 1 cut(s) | 113 |
| ScrFI | CCNGG | 1 cut(s) | 206 |
| SetI | ASST | 5 cut(s) | 69, 84, 111, 151, 210 |
| SfuI | TTCGAA | 2 cut(s) | 26, 128 |
| Sse9I | AATT | 3 cut(s) | 33, 159, 173 |
| SsiI | CCGC | 1 cut(s) | 191 |
| SspMI | CTAG | 1 cut(s) | 150 |
| StyD4I | CCNGG | 1 cut(s) | 204 |
| TaqI | TCGA | 4 cut(s) | 26, 111, 128, 183 |
| TasI | AATT | 3 cut(s) | 33, 159, 173 |
| TfiI | GAWTC | 1 cut(s) | 142 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| Tth111I | GACNNNGTC | 1 cut(s) | 107 |
| XspI | CTAG | 1 cut(s) | 150 |