Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g16860 |
| malus_domestica | MD12G1106700.v1.1 |
| prunus_persica | Prupe.7G125600_v2.0.a1 |
| pyrus_communis | pycom12g10720 |
| rosa_chinensis | RchiOBHm_Chr3g0470881 |
| rosa_laevigata | RLG00000024237 |
| rosa_multiflora | Rmu_sc0013860.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00027940 Rroxscaffold_4G00331780 Rroxscaffold_6G00410450 |
| rosa_rugosa | Rorug03G0113300 |
| rosa_samantha | Rh3AG163100 Rh3BG188500 Rh3CG178500 Rh3DG187600 |
| rosa_wichuraiana | Rw3G015360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 296 |
| AclWI | GGATC | 1 cut(s) | 226 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 240 |
| AfaI | GTAC | 1 cut(s) | 79 |
| AgsI | TTSAA | 3 cut(s) | 183, 200, 227 |
| AluBI | AGCT | 2 cut(s) | 203, 259 |
| AluI | AGCT | 2 cut(s) | 203, 259 |
| Alw26I | GTCTC | 2 cut(s) | 26, 93 |
| AlwI | GGATC | 1 cut(s) | 226 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApoI | RAATTY | 1 cut(s) | 240 |
| AsuC2I | CCSGG | 1 cut(s) | 188 |
| AsuHPI | GGTGA | 1 cut(s) | 287 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanI | GGYRCC | 1 cut(s) | 296 |
| BbsI | GAAGAC | 1 cut(s) | 57 |
| BccI | CCATC | 1 cut(s) | 107 |
| BcnI | CCSGG | 1 cut(s) | 188 |
| BcoDI | GTCTC | 2 cut(s) | 26, 93 |
| BfaI | CTAG | 4 cut(s) | 75, 204, 234, 301 |
| BmcAI | AGTACT | 1 cut(s) | 79 |
| Bme1390I | CCNGG | 1 cut(s) | 188 |
| BmiI | GGNNCC | 1 cut(s) | 298 |
| BmrFI | CCNGG | 1 cut(s) | 188 |
| BpiI | GAAGAC | 1 cut(s) | 57 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 158, 190 |
| BpuMI | CCSGG | 1 cut(s) | 188 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 274 |
| BseGI | GGATG | 2 cut(s) | 102, 252 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BshNI | GGYRCC | 1 cut(s) | 296 |
| BsiSI | CCGG | 1 cut(s) | 187 |
| BsmAI | GTCTC | 2 cut(s) | 26, 93 |
| BsmBI | CGTCTC | 2 cut(s) | 26, 93 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 218 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 298 |
| BspPI | GGATC | 1 cut(s) | 226 |
| BspQI | GCTCTTC | 1 cut(s) | 266 |
| BspT107I | GGYRCC | 1 cut(s) | 296 |
| BssMI | GATC | 1 cut(s) | 218 |
| Bst4CI | ACNGT | 1 cut(s) | 275 |
| Bst6I | CTCTTC | 2 cut(s) | 98, 266 |
| BstF5I | GGATG | 2 cut(s) | 102, 252 |
| BstKTI | GATC | 1 cut(s) | 221 |
| BstMAI | GTCTC | 2 cut(s) | 26, 93 |
| BstMBI | GATC | 1 cut(s) | 218 |
| BstSCI | CCNGG | 1 cut(s) | 186 |
| BstV2I | GAAGAC | 1 cut(s) | 57 |
| BstX2I | RGATCY | 1 cut(s) | 218 |
| BstYI | RGATCY | 1 cut(s) | 218 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 2 cut(s) | 102, 252 |
| CseI | GACGC | 1 cut(s) | 75 |
| Csp6I | GTAC | 1 cut(s) | 78 |
| CviJI | RGCY | 5 cut(s) | 5, 186, 203, 233, 259 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 186, 203, 233, 259 |
| CviQI | GTAC | 1 cut(s) | 78 |
| DpnI | GATC | 1 cut(s) | 220 |
| DpnII | GATC | 1 cut(s) | 218 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 98, 266 |
| EarI | CTCTTC | 2 cut(s) | 98, 266 |
| Esp3I | CGTCTC | 2 cut(s) | 26, 93 |
| FaiI | YATR | 1 cut(s) | 140 |
| FokI | GGATG | 2 cut(s) | 89, 239 |
| FspBI | CTAG | 4 cut(s) | 75, 204, 234, 301 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 187 |
| HgaI | GACGC | 1 cut(s) | 75 |
| HinfI | GANTC | 2 cut(s) | 173, 196 |
| HpaII | CCGG | 1 cut(s) | 187 |
| HphI | GGTGA | 1 cut(s) | 287 |
| Hpy166II | GTNNAC | 1 cut(s) | 157 |
| Hpy8I | GTNNAC | 1 cut(s) | 157 |
| HpyAV | CCTTC | 1 cut(s) | 272 |
| HpyCH4III | ACNGT | 1 cut(s) | 275 |
| HpyCH4IV | ACGT | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 1 cut(s) | 209 |
| HpySE526I | ACGT | 1 cut(s) | 62 |
| Kzo9I | GATC | 1 cut(s) | 218 |
| LguI | GCTCTTC | 1 cut(s) | 266 |
| LpnPI | CCDG | 3 cut(s) | 19, 200, 269 |
| MaeI | CTAG | 4 cut(s) | 75, 204, 234, 301 |
| MaeII | ACGT | 1 cut(s) | 62 |
| MalI | GATC | 1 cut(s) | 220 |
| MboI | GATC | 1 cut(s) | 218 |
| MboII | GAAGA | 4 cut(s) | 57, 85, 253, 297 |
| MflI | RGATCY | 1 cut(s) | 218 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 3 cut(s) | 213, 227, 240 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 167 |
| MnlI | CCTC | 3 cut(s) | 67, 118, 133 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 1 cut(s) | 187 |
| MspR9I | CCNGG | 1 cut(s) | 188 |
| NciI | CCSGG | 1 cut(s) | 188 |
| NdeII | GATC | 1 cut(s) | 218 |
| NlaIV | GGNNCC | 1 cut(s) | 298 |
| PciSI | GCTCTTC | 1 cut(s) | 266 |
| PfeI | GAWTC | 1 cut(s) | 196 |
| PleI | GAGTC | 1 cut(s) | 167 |
| PpsI | GAGTC | 1 cut(s) | 167 |
| PspN4I | GGNNCC | 1 cut(s) | 298 |
| PsuI | RGATCY | 1 cut(s) | 218 |
| RsaI | GTAC | 1 cut(s) | 79 |
| RsaNI | GTAC | 1 cut(s) | 78 |
| SapI | GCTCTTC | 1 cut(s) | 266 |
| Sau3AI | GATC | 1 cut(s) | 218 |
| ScaI | AGTACT | 1 cut(s) | 79 |
| SchI | GAGTC | 1 cut(s) | 167 |
| ScrFI | CCNGG | 1 cut(s) | 188 |
| SetI | ASST | 4 cut(s) | 65, 125, 205, 261 |
| Sse9I | AATT | 3 cut(s) | 213, 227, 240 |
| SspMI | CTAG | 4 cut(s) | 75, 204, 234, 301 |
| StyD4I | CCNGG | 1 cut(s) | 186 |
| TaaI | ACNGT | 1 cut(s) | 275 |
| TaiI | ACGT | 1 cut(s) | 65 |
| TaqII | GACCGA | 1 cut(s) | 25 |
| TasI | AATT | 3 cut(s) | 213, 227, 240 |
| TatI | WGTACW | 1 cut(s) | 77 |
| TfiI | GAWTC | 1 cut(s) | 196 |
| TspDTI | ATGAA | 1 cut(s) | 233 |
| XapI | RAATTY | 1 cut(s) | 240 |
| XspI | CTAG | 4 cut(s) | 75, 204, 234, 301 |
| ZrmI | AGTACT | 1 cut(s) | 79 |