Rroxscaffold_1G00045050

Domain of unknown function (DUF4408)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
64107443 .. 64109087
1645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00045050.1

Sequence Viewer

Length: 1062 bp
ATGTCGACGAGTTGGAGCAACAACTGGTTACTCTCTCTCAAGATCGTGCTGATCTCCACCGGCGTCGTCTCCATGGCCGTCGCACTGAAGCTCTCGGTTCCGGTGGCCGCGGACCTCGTCTCCTCGCAAGTACCTTCTCTATGGAGCTCTCTGCTCTCTTGGCTCACACCTCCTTACCTCTACATCCTCATCAACTGCATCATCATCAGCATCGTCGCCTCCTCCAAGCTCCATCATCCTAAATCCGAAGATAATCACGATTCCGAAACTATTCCGCCGCCTCCGGAGATGGTAGCCGTCCCTCCGGTAACGACGGTCACGATCCCCGCAGCGGAAGTGAGGCCTGAGTACACAGCCTACAACGGCGTCTCTCTGAGCGAGTACGGTTACGATTCCAATGTGTTGCCGGAGGTTTCCGATTCGTACGGAGATGCAGCGGCGGTTGAGATCGTTGAGGATTTGAACGCGGAGCCGGAGAAGGAGAAGAACGAGGTTCTTAACGTCGGTGATGACGCCGCCGCTGCCGCATCCAGGCCTGCACGGAGTGGTTTGCAGAGGAAGGATTCCATGGAGTTTTGGTTGAATGAGAACCAGAGGCCACCGGTTTCTGCTAGATTCGCTCACAGAAAAGCTAGCCCTGAAGGAGGGAGGTCGTTGGGAGTGTCGAAGCCGAAGAGGCACGACACGCTGGAGAGCACGTGGAAGACGATAACGGACGGCCGGTCGGTGCCGTTAACCAGGCACTTGAAGAAGTCCGACACGTGGGAGCGGCGAATGGACCAGAATACCCCGCCTGCTAACAACAAGACGATGAACAAGTCGGAGACGTTCCACGAGCGGAGCAGCACTACTGCGACCGGGTCGCCGGTGAGACAGTCGCCCGGGTCGTCGGGGGGCCGGCTGAGGAAGGAACCGTCGCTGAGTCAGGACGAGTTGAACCGGCGGGTGGAGGCGTTCATTAACAAGTTTAACGAGGAGATGAGGCTGCAGAGGCAGGAGTCGCTGAAACAGTACCAGGAGATGATCGGCAGTGGGGCCCAGGTGGCGCCGTTAGCCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

353

Amino Acids

38.91

Weight (kDa)

6.28

Isoelectric Point (pI)

58.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4408 PF14364 45 - 77 7.1e-16 Domain of unknown function (DUF4408)
DUF761 PF05553 309 - 342 1.4e-16 Cotton fibre expressed protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012843)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 727, 1045
AccBSI CCGCTC 2 cut(s) 769, 838
AccI GTMKAC 1 cut(s) 5
AccII CGCG 2 cut(s) 110, 467
AccIII TCCGGA 1 cut(s) 283
AclWI GGATC 1 cut(s) 316
AcoI YGGCCR 3 cut(s) 75, 105, 718
AcuI CTGAAG 2 cut(s) 107, 660
AcvI CACGTG 2 cut(s) 699, 762
AcyI GRCGYC 4 cut(s) 63, 366, 513, 1046
AdeI CACNNNGTG 1 cut(s) 545
AfaI GTAC 5 cut(s) 132, 350, 383, 425, 1013
AfiI CCNNNNNNNGG 5 cut(s) 331, 531, 644, 762, 946
AflIII ACRYGT 1 cut(s) 759
AgeI ACCGGT 1 cut(s) 601
AgsI TTSAA 4 cut(s) 463, 583, 748, 937
AhdI GACNNNNNGTC 1 cut(s) 721
AjnI CCWGG 4 cut(s) 530, 737, 1014, 1038
AluBI AGCT 4 cut(s) 91, 147, 229, 632
AluI AGCT 4 cut(s) 91, 147, 229, 632
Alw21I GWGCWC 2 cut(s) 149, 698
Alw26I GTCTC 5 cut(s) 73, 124, 373, 818, 865
AlwI GGATC 1 cut(s) 316
Ama87I CYCGRG 1 cut(s) 881
Aor13HI TCCGGA 1 cut(s) 283
AoxI GGCC 8 cut(s) 75, 105, 341, 533, 596, 718, 895, 1035
ApaI GGGCCC 1 cut(s) 1039
ApeKI GCWGC 5 cut(s) 329, 434, 521, 843, 985
AsiGI ACCGGT 1 cut(s) 601
Asp700I GAANNNNTTC 1 cut(s) 270
AspLEI GCGC 1 cut(s) 1048
AspS9I GGNCC 5 cut(s) 112, 778, 895, 1035, 1036
AsuC2I CCSGG 3 cut(s) 859, 882, 883
AsuHPI GGTGA 2 cut(s) 518, 880
AsuNHI GCTAGC 1 cut(s) 632
AvaI CYCGRG 1 cut(s) 881
AvaII GGWCC 2 cut(s) 112, 778
BaeGI GKGCMC 1 cut(s) 1039
BanI GGYRCC 2 cut(s) 727, 1045
BanII GRGCYC 2 cut(s) 149, 1039
BauI CACGAG 1 cut(s) 833
BbrPI CACGTG 2 cut(s) 699, 762
BbsI GAAGAC 1 cut(s) 710
Bbv12I GWGCWC 2 cut(s) 149, 698
BbvCI CCTCAGC 1 cut(s) 902
BbvI GCAGC 5 cut(s) 341, 446, 508, 855, 972
BccI CCATC 2 cut(s) 240, 283
BceAI ACGGC 6 cut(s) 62, 281, 379, 715, 733, 1033
BciT130I CCWGG 4 cut(s) 532, 739, 1016, 1040
BcnI CCSGG 3 cut(s) 859, 882, 883
BcoDI GTCTC 5 cut(s) 73, 124, 373, 818, 865
BfaI CTAG 2 cut(s) 612, 633
BfmI CTRYAG 1 cut(s) 986
BfoI RGCGCY 1 cut(s) 1049
BglI GCCNNNNNGGC 2 cut(s) 676, 1043
Bme1390I CCNGG 7 cut(s) 532, 739, 859, 882, 883, 1016, 1040
Bme18I GGWCC 2 cut(s) 112, 778
BmeRI GACNNNNNGTC 1 cut(s) 721
BmeT110I CYCGRG 1 cut(s) 881
BmgT120I GGNCC 5 cut(s) 112, 778, 895, 1035, 1036
BmiI GGNNCC 8 cut(s) 99, 471, 729, 896, 912, 1036, 1037, 1047
BmrFI CCNGG 7 cut(s) 532, 739, 859, 882, 883, 1016, 1040
BmsI GCATC 4 cut(s) 207, 219, 421, 536
BmtI GCTAGC 1 cut(s) 636
BpiI GAAGAC 1 cut(s) 710
BpmI CTGGAG 1 cut(s) 710
Bpu10I CCTNAGC 1 cut(s) 902
BpuEI CTTGAG 1 cut(s) 23
BpuMI CCSGG 3 cut(s) 859, 882, 883
BsaAI YACGTR 2 cut(s) 699, 762
BsaHI GRCGYC 4 cut(s) 63, 366, 513, 1046
BsaJI CCNNGG 5 cut(s) 72, 108, 567, 881, 1038
BsaWI WCCGGW 4 cut(s) 100, 283, 304, 601
BsaXI ACNNNNNCTCC 6 cut(s) 104, 134, 563, 593, 683, 713
Bsc4I CCNNNNNNNGG 5 cut(s) 331, 531, 644, 762, 946
Bse118I RCCGGY 6 cut(s) 59, 601, 720, 865, 897, 939
Bse1I ACTGG 1 cut(s) 29
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 4 cut(s) 532, 739, 1016, 1040
BseDI CCNNGG 5 cut(s) 72, 108, 567, 881, 1038
BseGI GGATG 3 cut(s) 183, 235, 527
BseLI CCNNNNNNNGG 5 cut(s) 331, 531, 644, 762, 946
BseMII CTCAG 4 cut(s) 336, 365, 893, 911
BseNI ACTGG 1 cut(s) 29
BseRI GAGGAG 3 cut(s) 112, 211, 989
BseSI GKGCMC 1 cut(s) 1039
BseX3I CGGCCG 1 cut(s) 718
BseXI GCAGC 5 cut(s) 341, 446, 508, 855, 972
BsgI GTGCAG 1 cut(s) 522
Bsh1236I CGCG 2 cut(s) 110, 467
Bsh1285I CGRYCG 3 cut(s) 721, 725, 858
BshFI GGCC 8 cut(s) 77, 107, 343, 535, 598, 720, 897, 1037
BshNI GGYRCC 2 cut(s) 727, 1045
BshTI ACCGGT 1 cut(s) 601
BsiEI CGRYCG 3 cut(s) 721, 725, 858
BsiHKAI GWGCWC 2 cut(s) 149, 698
BsiHKCI CYCGRG 1 cut(s) 881
BsiWI CGTACG 1 cut(s) 423
BslFI GGGAC 1 cut(s) 284
BslI CCNNNNNNNGG 5 cut(s) 331, 531, 644, 762, 946
BsmAI GTCTC 5 cut(s) 73, 124, 373, 818, 865
BsmBI CGTCTC 4 cut(s) 73, 124, 373, 818
BsmFI GGGAC 1 cut(s) 284
BsnI GGCC 8 cut(s) 77, 107, 343, 535, 598, 720, 897, 1037
BsoBI CYCGRG 1 cut(s) 881
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 3 cut(s) 149, 698, 1039
Bsp13I TCCGGA 1 cut(s) 283
Bsp143I GATC 5 cut(s) 42, 51, 321, 447, 1023
Bsp19I CCATGG 2 cut(s) 72, 567
BspANI GGCC 8 cut(s) 77, 107, 343, 535, 598, 720, 897, 1037
BspCNI CTCAG 4 cut(s) 337, 366, 894, 912
BspEI TCCGGA 1 cut(s) 283
BspFNI CGCG 2 cut(s) 110, 467
BspLI GGNNCC 8 cut(s) 99, 471, 729, 896, 912, 1036, 1037, 1047
BspMAI CTGCAG 1 cut(s) 990
BspOI GCTAGC 1 cut(s) 636
BspPI GGATC 1 cut(s) 316
BspT107I GGYRCC 2 cut(s) 727, 1045
BsrBI CCGCTC 2 cut(s) 769, 838
BsrFI RCCGGY 6 cut(s) 59, 601, 720, 865, 897, 939
BsrI ACTGG 1 cut(s) 29
BssAI RCCGGY 6 cut(s) 59, 601, 720, 865, 897, 939
BssECI CCNNGG 5 cut(s) 72, 108, 567, 881, 1038
BssMI GATC 5 cut(s) 42, 51, 321, 447, 1023
BssNI GRCGYC 4 cut(s) 63, 366, 513, 1046
BssSI CACGAG 1 cut(s) 833
BssT1I CCWWGG 2 cut(s) 72, 567
Bst2BI CACGAG 1 cut(s) 833
Bst2UI CCWGG 4 cut(s) 532, 739, 1016, 1040
Bst4CI ACNGT 5 cut(s) 316, 386, 876, 915, 1011
Bst6I CTCTTC 1 cut(s) 668
BstACI GRCGYC 4 cut(s) 63, 366, 513, 1046
BstBAI YACGTR 2 cut(s) 699, 762
BstC8I GCNNGC 4 cut(s) 537, 634, 795, 899
BstDEI CTNAG 4 cut(s) 345, 374, 902, 920
BstDSI CCRYGG 3 cut(s) 72, 108, 567
BstENI CCTNNNNNAGG 1 cut(s) 642
BstF5I GGATG 3 cut(s) 183, 235, 527
BstFNI CGCG 2 cut(s) 110, 467
BstH2I RGCGCY 1 cut(s) 1049
BstHHI GCGC 1 cut(s) 1048
BstKTI GATC 5 cut(s) 45, 54, 324, 450, 1026
BstMAI GTCTC 5 cut(s) 73, 124, 373, 818, 865
BstMBI GATC 5 cut(s) 42, 51, 321, 447, 1023
BstMCI CGRYCG 3 cut(s) 721, 725, 858
BstNI CCWGG 4 cut(s) 532, 739, 1016, 1040
BstSCI CCNGG 7 cut(s) 530, 737, 857, 880, 881, 1014, 1038
BstSFI CTRYAG 1 cut(s) 986
BstSLI GKGCMC 1 cut(s) 1039
BstUI CGCG 2 cut(s) 110, 467
BstV1I GCAGC 5 cut(s) 341, 446, 508, 855, 972
BstV2I GAAGAC 1 cut(s) 710
BstZI CGGCCG 1 cut(s) 718
BsuRI GGCC 8 cut(s) 77, 107, 343, 535, 598, 720, 897, 1037
BtgI CCRYGG 3 cut(s) 72, 108, 567
BtsCI GGATG 3 cut(s) 183, 235, 527
BtsI GCAGTG 1 cut(s) 1036
BtsIMutI CAGTG 2 cut(s) 83, 1036
Cac8I GCNNGC 4 cut(s) 537, 634, 795, 899
CfoI GCGC 1 cut(s) 1048
Cfr10I RCCGGY 6 cut(s) 59, 601, 720, 865, 897, 939
Cfr13I GGNCC 5 cut(s) 112, 778, 895, 1035, 1036
Cfr42I CCGCGG 1 cut(s) 111
Cfr9I CCCGGG 1 cut(s) 881
CseI GACGC 3 cut(s) 52, 355, 521
Csp6I GTAC 5 cut(s) 131, 349, 382, 424, 1012
CspAI ACCGGT 1 cut(s) 601
CviAII CATG 2 cut(s) 73, 568
CviQI GTAC 5 cut(s) 131, 349, 382, 424, 1012
DdeI CTNAG 4 cut(s) 345, 374, 902, 920
DinI GGCGCC 1 cut(s) 1047
DpnI GATC 5 cut(s) 44, 53, 323, 449, 1025
DpnII GATC 5 cut(s) 42, 51, 321, 447, 1023
DraIII CACNNNGTG 1 cut(s) 545
DriI GACNNNNNGTC 1 cut(s) 721
EaeI YGGCCR 3 cut(s) 75, 105, 718
EagI CGGCCG 1 cut(s) 718
Eam1104I CTCTTC 1 cut(s) 668
Eam1105I GACNNNNNGTC 1 cut(s) 721
EarI CTCTTC 1 cut(s) 668
EciI GGCGGA 1 cut(s) 264
Ecl136II GAGCTC 1 cut(s) 147
EclXI CGGCCG 1 cut(s) 718
Eco130I CCWWGG 2 cut(s) 72, 567
Eco147I AGGCCT 2 cut(s) 343, 535
Eco24I GRGCYC 2 cut(s) 149, 1039
Eco47I GGWCC 2 cut(s) 112, 778
Eco52I CGGCCG 1 cut(s) 718
Eco53kI GAGCTC 1 cut(s) 147
Eco57I CTGAAG 2 cut(s) 107, 660
Eco72I CACGTG 2 cut(s) 699, 762
Eco88I CYCGRG 1 cut(s) 881
EcoICRI GAGCTC 1 cut(s) 147
EcoNI CCTNNNNNAGG 1 cut(s) 642
EcoO109I RGGNCCY 1 cut(s) 1035
EcoRII CCWGG 4 cut(s) 530, 737, 1014, 1038
EcoT14I CCWWGG 2 cut(s) 72, 567
EcoT38I GRGCYC 2 cut(s) 149, 1039
EgeI GGCGCC 1 cut(s) 1047
EheI GGCGCC 1 cut(s) 1047
ErhI CCWWGG 2 cut(s) 72, 567
Esp3I CGTCTC 4 cut(s) 73, 124, 373, 818
FaeI CATG 2 cut(s) 76, 571
FaiI YATR 3 cut(s) 74, 142, 569
FaqI GGGAC 1 cut(s) 284
FatI CATG 2 cut(s) 72, 567
FauI CCCGC 3 cut(s) 334, 798, 936
FblI GTMKAC 1 cut(s) 5
FokI GGATG 3 cut(s) 170, 222, 514
FriOI GRGCYC 2 cut(s) 149, 1039
FspBI CTAG 2 cut(s) 612, 633
GlaI GCGC 1 cut(s) 1047
GsuI CTGGAG 1 cut(s) 710
HaeII RGCGCY 1 cut(s) 1049
HaeIII GGCC 8 cut(s) 77, 107, 343, 535, 598, 720, 897, 1037
HgaI GACGC 3 cut(s) 52, 355, 521
HhaI GCGC 1 cut(s) 1048
Hin1I GRCGYC 4 cut(s) 63, 366, 513, 1046
Hin1II CATG 2 cut(s) 76, 571
Hin6I GCGC 1 cut(s) 1046
HinP1I GCGC 1 cut(s) 1046
HincII GTYRAC 2 cut(s) 6, 735
HindII GTYRAC 2 cut(s) 6, 735
HinfI GANTC 7 cut(s) 260, 392, 419, 563, 615, 922, 998
HpaI GTTAAC 1 cut(s) 735
HphI GGTGA 2 cut(s) 518, 880
Hpy166II GTNNAC 3 cut(s) 6, 351, 735
Hpy188I TCNGA 6 cut(s) 247, 265, 375, 418, 757, 823
Hpy188III TCNNGA 5 cut(s) 40, 257, 284, 319, 926
Hpy8I GTNNAC 3 cut(s) 6, 351, 735
Hpy99I CGWCG 8 cut(s) 10, 68, 83, 218, 316, 506, 892, 919
HpyAV CCTTC 5 cut(s) 144, 472, 553, 635, 901
HpyCH4III ACNGT 5 cut(s) 316, 386, 876, 915, 1011
HpyCH4IV ACGT 4 cut(s) 501, 698, 761, 827
HpyCH4V TGCA 5 cut(s) 198, 434, 539, 553, 988
HpyF3I CTNAG 4 cut(s) 345, 374, 902, 920
HpySE526I ACGT 4 cut(s) 501, 698, 761, 827
Hsp92I GRCGYC 4 cut(s) 63, 366, 513, 1046
Hsp92II CATG 2 cut(s) 76, 571
HspAI GCGC 1 cut(s) 1046
KasI GGCGCC 1 cut(s) 1045
Kpn2I TCCGGA 1 cut(s) 283
KroI GCCGGC 1 cut(s) 897
KroNI GCCGGC 1 cut(s) 899
KspAI GTTAAC 1 cut(s) 735
KspI CCGCGG 1 cut(s) 111
Kzo9I GATC 5 cut(s) 42, 51, 321, 447, 1023
LmnI GCTCC 6 cut(s) 15, 144, 234, 469, 766, 840
Lsp1109I GCAGC 5 cut(s) 341, 446, 508, 855, 972
LweI GCATC 4 cut(s) 207, 219, 421, 536
MaeI CTAG 2 cut(s) 612, 633
MaeII ACGT 4 cut(s) 501, 698, 761, 827
MaeIII GTNAC 4 cut(s) 27, 307, 316, 386
MalI GATC 5 cut(s) 44, 53, 323, 449, 1025
MbiI CCGCTC 2 cut(s) 769, 838
MboI GATC 5 cut(s) 42, 51, 321, 447, 1023
MboII GAAGA 5 cut(s) 260, 496, 685, 715, 760
MhlI GDGCHC 3 cut(s) 149, 698, 1039
Mly113I GGCGCC 1 cut(s) 1046
MlyI GAGTC 2 cut(s) 931, 1007
MmeI TCCRAC 2 cut(s) 780, 801
MroI TCCGGA 1 cut(s) 283
MroNI GCCGGC 1 cut(s) 897
MroXI GAANNNNTTC 1 cut(s) 270
MseI TTAA 4 cut(s) 498, 734, 960, 969
MspA1I CMGCKG 4 cut(s) 110, 332, 437, 521
MspR9I CCNGG 7 cut(s) 532, 739, 859, 882, 883, 1016, 1040
MvaI CCWGG 4 cut(s) 532, 739, 1016, 1040
MvnI CGCG 2 cut(s) 110, 467
NaeI GCCGGC 1 cut(s) 899
NarI GGCGCC 1 cut(s) 1046
NciI CCSGG 3 cut(s) 859, 882, 883
NcoI CCATGG 2 cut(s) 72, 567
NdeII GATC 5 cut(s) 42, 51, 321, 447, 1023
NgoMIV GCCGGC 1 cut(s) 897
NheI GCTAGC 1 cut(s) 632
NlaIII CATG 2 cut(s) 76, 571
NlaIV GGNNCC 8 cut(s) 99, 471, 729, 896, 912, 1036, 1037, 1047
NmuCI GTSAC 1 cut(s) 316
PceI AGGCCT 2 cut(s) 343, 535
PcsI WCGNNNNNNNCGW 3 cut(s) 317, 704, 884
PdiI GCCGGC 1 cut(s) 899
PdmI GAANNNNTTC 1 cut(s) 270
PfeI GAWTC 5 cut(s) 260, 392, 419, 563, 615
Pfl23II CGTACG 1 cut(s) 423
PflFI GACNNNGTC 2 cut(s) 116, 859
PinAI ACCGGT 1 cut(s) 601
PleI GAGTC 2 cut(s) 930, 1006
PluTI GGCGCC 1 cut(s) 1049
PmaCI CACGTG 2 cut(s) 699, 762
PmlI CACGTG 2 cut(s) 699, 762
PpsI GAGTC 2 cut(s) 930, 1006
Ppu21I YACGTR 2 cut(s) 699, 762
Psp124BI GAGCTC 1 cut(s) 149
Psp6I CCWGG 4 cut(s) 530, 737, 1014, 1038
PspCI CACGTG 2 cut(s) 699, 762
PspGI CCWGG 4 cut(s) 530, 737, 1014, 1038
PspLI CGTACG 1 cut(s) 423
PspN4I GGNNCC 8 cut(s) 99, 471, 729, 896, 912, 1036, 1037, 1047
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 5 cut(s) 112, 778, 895, 1035, 1036
PstI CTGCAG 1 cut(s) 990
PsyI GACNNNGTC 2 cut(s) 116, 859
RsaI GTAC 5 cut(s) 132, 350, 383, 425, 1013
RsaNI GTAC 5 cut(s) 131, 349, 382, 424, 1012
SacI GAGCTC 1 cut(s) 149
SacII CCGCGG 1 cut(s) 111
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 4 cut(s) 498, 734, 960, 969
Sau3AI GATC 5 cut(s) 42, 51, 321, 447, 1023
Sau96I GGNCC 5 cut(s) 112, 778, 895, 1035, 1036
SchI GAGTC 2 cut(s) 931, 1007
ScrFI CCNGG 7 cut(s) 532, 739, 859, 882, 883, 1016, 1040
SduI GDGCHC 3 cut(s) 149, 698, 1039
SfaNI GCATC 4 cut(s) 207, 219, 421, 536
SfcI CTRYAG 1 cut(s) 986
SfoI GGCGCC 1 cut(s) 1047
Sfr303I CCGCGG 1 cut(s) 111
SgrAI CRCCGGYG 2 cut(s) 59, 865
SgrBI CCGCGG 1 cut(s) 111
SinI GGWCC 2 cut(s) 112, 778
SmaI CCCGGG 1 cut(s) 883
SmlI CTYRAG 1 cut(s) 38
SmoI CTYRAG 1 cut(s) 38
SseBI AGGCCT 2 cut(s) 343, 535
SspDI GGCGCC 1 cut(s) 1045
SspMI CTAG 2 cut(s) 612, 633
SstI GAGCTC 1 cut(s) 149
StuI AGGCCT 2 cut(s) 343, 535
StyD4I CCNGG 7 cut(s) 530, 737, 857, 880, 881, 1014, 1038
StyI CCWWGG 2 cut(s) 72, 567
TaaI ACNGT 5 cut(s) 316, 386, 876, 915, 1011
TaiI ACGT 4 cut(s) 504, 701, 764, 830
TaqI TCGA 2 cut(s) 5, 665
TatI WGTACW 1 cut(s) 348
TauI GCSGC 7 cut(s) 110, 280, 440, 518, 521, 527, 772
TfiI GAWTC 5 cut(s) 260, 392, 419, 563, 615
Tru1I TTAA 4 cut(s) 498, 734, 960, 969
Tru9I TTAA 4 cut(s) 498, 734, 960, 969
TscAI CASTG 2 cut(s) 90, 1036
TseFI GTSAC 1 cut(s) 316
TseI GCWGC 5 cut(s) 329, 434, 521, 843, 985
Tsp45I GTSAC 1 cut(s) 316
TspDTI ATGAA 2 cut(s) 827, 946
TspGWI ACGGA 3 cut(s) 441, 556, 728
TspMI CCCGGG 1 cut(s) 881
TspRI CASTG 2 cut(s) 90, 1036
Tth111I GACNNNGTC 2 cut(s) 116, 859
VpaK11BI GGWCC 2 cut(s) 112, 778
XagI CCTNNNNNAGG 1 cut(s) 642
XmaI CCCGGG 1 cut(s) 881
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 270
XspI CTAG 2 cut(s) 612, 633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.