Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0009664

Physical Location & Seq

Genomic Coordinates Forward (+)

93818869 .. 93822871

Gene Structure 4003 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00072820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGTGGAGCTGCAGTCTTGTGCTAGATTGGTCAAGGCTTCTGCATTATGCGCGATAGAGGAAGGTATGAAAGGAGACGGTGTCGATGTTATTGCAGAGATTTCAGCTGAATTAGAAAGGGAAAGACAGAAGAATGCAGAACTTATGCAGAGAATACTAATTCTTGAAGCTCGGATACAGGAAAAAGAGAATGAACCTCCTCGAACAAATGGACAGGGCAGTTGCTCAAATTCAATGGAAAGGAACTTGAAGAAGTTCAAGAGACAGAAGATTGAACTCACTAGTAAAACAACTGAGGATGGTAGTATAACAGTTGTCCAAGCTGAAATTGCTGCACAGAAGAAGCATATTGAATCCTATGCCCTTGAAGAACCAATTGTAGATGACCGTCTAGTCAACTGGATGAGCATGGAGGAAACACAGGTTTTGCTTTCTGAAAAAGTTAAGGATGGTGATTCAACTGCAGATTGTGATGAAACTGATGACAGTGATGATGAAGATGAAGATTATCGCGAAGAAGATGGTATTAACAATGACCATAAAGAAGCTGATAAAACTTCAAGACTTGTTGATGAACTGACTTATGAAGTTGCTGATAAGGGTTCAGATGCAGGGTGTGCAGAATTTTTCTCAGGTGCAGGTCAGCCACTAGTTCAAAATGTGAACCGAGAAACCAATGAAGAACTACCAATAGGGCCAATTTGTAATGAGATGGAAATTAGAAACCAAAACAAGACAGAACCTAAGGATTTTGGAAGTTTCAAGGTACCAACTAGTATCCCAACTTCGAAGAAGGAGTTTATTCATACAGGATCCGGGAGCCTATCACAACATAAAAAGCCTCCAAAGTTGGCATTTTGCCCAAAAGAAGTGAAGAGAATAATTGATTCAGAATCCCTTCTACAGAAAAATGCTCATTCACACACAATAAGGAAGATCATAGTTTTTGCATCTCTTGGTATAAGGCATGGTTGTGAAGATATATATGAATTAGACTTCAACCATTTTAGCATTTTAAGGAAGGGCGAGCAATACATATCTCCAACAGATCCTGGGGAGCATGTTCTGTACGAAAATCCTGGTGTTCGGAGGAAGGTGTTCTATCCAAACCGAAAGAACCCTACACTATGTCCAGTTCAAATACTTGAGGAAGAGAAGGCTATGCGTCCGTCAGATACTAGCTGCCCATCATGCTTATTTCTATGCATCAAGTATGGTGGAAGGACAAGAAACCTTCCCCAAAATGAATATGTCAGACAGCGCATGGGAAGAAACAAGCTAAAGTCTTTTGGTCCATTGATGTGTCGAATGGCAATGCTAGCTCATGTTCGCAGTGGGAGCTTCTTCTTCAAAGCCTTGGGAATCACACTCCTTTTCATGGCTGGTTTTCCTGATGACCTGGTTCAAAGGGAAACCAAATACCGGAACTTAGACTTGCTTCAGAAATATTACAGGACAGATGAGGATGCTGAAGGAGAGGAATTATTTCTTGCATATCCTATGATAGATGATGATACTCAGGCTAGTCCAGGTTCTCAGCAGTTTTGTGGCAAGACTTCTTCAACAAAAACAAAGGGAAAGAAACAAACTCACTCTAATAGTAAGCCTCATAATATGCAGAAGACTTCATTCCCAAATGGTACATTTTCAAGCTCTGCACCTCAATTTGGACTAATGAATCAAACCTGTATTCCCCCATTCGCTGCTCCACCAATCTCAAACACTGTGATCACCAATGCTGGTACTAATATCCCCTATCATAATCCAAACCCATATCACCTTTTTCCTCCACAACTATCAAACACTTTCATGCCTATGGTATATTGGCCTCCCACAAACACATTTTCTCCTGGACTACCTTATCAATCTACATGTGGTTACCGGTCTTACCCTTCTGCCGGAAATTACTTCATCCATCCGCAGCCTTATTACAGCCATCCATCCTGCGGTCCATTGATCCCCAAAACCATAGAAGTAGCAAAGAAAAATGGCATGGCCTCGGAGGAAGCTGCTGATAGTGATTATGATTGTAGTTCAAGCAGTATAGAGCCAAAGAAGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

687

Amino Acids

77.17

Weight (kDa)

5.72

Isoelectric Point (pI)

45.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009664)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g02100 FvH4_3g02100 FvH4_3g02100 FvH4_3g02100 FvH4_3g02100
malus_domestica	MD05G1345700.v1.1 MD10G1321100.v1.1
prunus_persica	Prupe.4G021200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0003191
rosa_laevigata	RLG00000031084
rosa_multiflora	Rmu_sc0000146.1_g000035
rosa_roxburghii	Rroxscaffold_1G00072820
rosa_rugosa	Rorug04G0401200 Rorug04G0401300 Rorug04G0401300 Rorug04G0401300 Rorug04G0401400
rosa_samantha	Rh5AG026100 Rh5BG027300 Rh5CG028900 Rh5DG025800
rosa_wichuraiana	Rw5G002420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	392
Acc36I	ACCTGC	1 cut(s)	629
Acc65I	GGTACC	1 cut(s)	766
AccB1I	GGYRCC	1 cut(s)	766
AccII	CGCG	2 cut(s)	53, 513
AciI	CCGC	2 cut(s)	1919, 1947
AclWI	GGATC	4 cut(s)	807, 820, 1043, 1951
AcsI	RAATTY	2 cut(s)	229, 623
AcuI	CTGAAG	2 cut(s)	1424, 1491
AfaI	GTAC	4 cut(s)	768, 1070, 1642, 1744
AfiI	CCNNNNNNNGG	5 cut(s)	1378, 1422, 1667, 1898, 1946
AflIII	ACRYGT	1 cut(s)	1871
AgeI	ACCGGT	1 cut(s)	1881
AhlI	ACTAGT	3 cut(s)	281, 649, 773
AjnI	CCWGG	5 cut(s)	1051, 1078, 1398, 1528, 1849
Alw26I	GTCTC	2 cut(s)	69, 256
AlwI	GGATC	4 cut(s)	807, 820, 1043, 1951
AlwNI	CAGNNNCTG	1 cut(s)	1052
AoxI	GGCC	3 cut(s)	695, 1826, 1995
ApeKI	GCWGC	6 cut(s)	10, 332, 1182, 1703, 1921, 2009
ApoI	RAATTY	2 cut(s)	229, 623
AsiGI	ACCGGT	1 cut(s)	1881
Asp700I	GAANNNNTTC	4 cut(s)	254, 897, 1097, 1485
Asp718I	GGTACC	1 cut(s)	766
AspLEI	GCGC	2 cut(s)	53, 1263
AspS9I	GGNCC	3 cut(s)	695, 1292, 1949
AsuC2I	CCSGG	1 cut(s)	817
AsuHPI	GGTGA	3 cut(s)	464, 1723, 1769
AsuII	TTCGAA	1 cut(s)	788
AsuNHI	GCTAGC	1 cut(s)	1318
AvaII	GGWCC	2 cut(s)	1292, 1949
AxyI	CCTNAGG	1 cut(s)	744
BamHI	GGATCC	1 cut(s)	812
BanI	GGYRCC	1 cut(s)	766
BarI	GAAGNNNNNNTAC	4 cut(s)	159, 191, 769, 801
BbsI	GAAGAC	1 cut(s)	1628
BbvI	GCAGC	5 cut(s)	319, 1169, 1690, 1933, 1996
BccI	CCATC	8 cut(s)	293, 443, 515, 706, 1195, 1923, 1944, 1948
BcgI	CGANNNNNNTGC	2 cut(s)	74, 108
BciT130I	CCWGG	5 cut(s)	1053, 1080, 1400, 1530, 1851
BciVI	GTATCC	2 cut(s)	168, 788
BclI	TGATCA	1 cut(s)	1728
BcnI	CCSGG	1 cut(s)	817
BcoDI	GTCTC	2 cut(s)	69, 256
BcuI	ACTAGT	3 cut(s)	281, 649, 773
BfaI	CTAG	9 cut(s)	24, 282, 392, 650, 774, 1179, 1319, 1524, 2062
BfmI	CTRYAG	3 cut(s)	11, 462, 902
BfuAI	ACCTGC	1 cut(s)	629
BfuI	GTATCC	2 cut(s)	168, 788
BisI	GCNGC	6 cut(s)	11, 333, 1183, 1704, 1922, 2010
BlsI	GCNGC	6 cut(s)	12, 334, 1184, 1705, 1923, 2011
Bme1390I	CCNGG	6 cut(s)	817, 1053, 1080, 1400, 1530, 1851
Bme18I	GGWCC	2 cut(s)	1292, 1949
BmgT120I	GGNCC	3 cut(s)	695, 1292, 1949
BmiI	GGNNCC	3 cut(s)	768, 814, 821
BmrFI	CCNGG	6 cut(s)	817, 1053, 1080, 1400, 1530, 1851
BmsI	GCATC	4 cut(s)	598, 959, 1215, 1456
BmtI	GCTAGC	1 cut(s)	1322
BpiI	GAAGAC	1 cut(s)	1628
Bpu14I	TTCGAA	1 cut(s)	788
BpuEI	CTTGAG	1 cut(s)	1166
BpuMI	CCSGG	1 cut(s)	817
BsaJI	CCNNGG	3 cut(s)	1052, 1356, 1998
BsaWI	WCCGGW	2 cut(s)	1422, 1881
BsaXI	ACNNNNNCTCC	5 cut(s)	29, 66, 96, 1831, 1861
Bsc4I	CCNNNNNNNGG	5 cut(s)	1378, 1422, 1667, 1898, 1946
Bse118I	RCCGGY	1 cut(s)	1881
Bse1I	ACTGG	2 cut(s)	404, 1133
Bse21I	CCTNAGG	1 cut(s)	744
Bse3DI	GCAATG	1 cut(s)	1320
BseBI	CCWGG	5 cut(s)	1053, 1080, 1400, 1530, 1851
BseDI	CCNNGG	3 cut(s)	1052, 1356, 1998
BseGI	GGATG	8 cut(s)	304, 408, 454, 1471, 1911, 1915, 1936, 1940
BseLI	CCNNNNNNNGG	5 cut(s)	1378, 1422, 1667, 1898, 1946
BseMI	GCAATG	1 cut(s)	1320
BseMII	CTCAG	4 cut(s)	285, 645, 1532, 1550
BseNI	ACTGG	2 cut(s)	404, 1133
BseRI	GAGGAG	1 cut(s)	189
BseXI	GCAGC	5 cut(s)	319, 1169, 1690, 1933, 1996
BsgI	GTGCAG	4 cut(s)	318, 639, 657, 1641
Bsh1236I	CGCG	2 cut(s)	53, 513
BshFI	GGCC	3 cut(s)	697, 1828, 1997
BshNI	GGYRCC	1 cut(s)	766
BshTI	ACCGGT	1 cut(s)	1881
BsiSI	CCGG	4 cut(s)	816, 1423, 1882, 1899
BslI	CCNNNNNNNGG	5 cut(s)	1378, 1422, 1667, 1898, 1946
BsmAI	GTCTC	2 cut(s)	69, 256
BsmBI	CGTCTC	1 cut(s)	69
BsmI	GAATGC	1 cut(s)	139
BsnI	GGCC	3 cut(s)	697, 1828, 1997
Bsp119I	TTCGAA	1 cut(s)	788
Bsp143I	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
Bsp68I	TCGCGA	1 cut(s)	513
BspACI	CCGC	2 cut(s)	1919, 1947
BspANI	GGCC	3 cut(s)	697, 1828, 1997
BspCNI	CTCAG	4 cut(s)	286, 644, 1531, 1549
BspFNI	CGCG	2 cut(s)	53, 513
BspLI	GGNNCC	3 cut(s)	768, 814, 821
BspMAI	CTGCAG	2 cut(s)	15, 466
BspMI	ACCTGC	1 cut(s)	629
BspOI	GCTAGC	1 cut(s)	1322
BspPI	GGATC	4 cut(s)	807, 820, 1043, 1951
BspT104I	TTCGAA	1 cut(s)	788
BspT107I	GGYRCC	1 cut(s)	766
BsrDI	GCAATG	1 cut(s)	1320
BsrFI	RCCGGY	1 cut(s)	1881
BsrI	ACTGG	2 cut(s)	404, 1133
BssAI	RCCGGY	1 cut(s)	1881
BssECI	CCNNGG	3 cut(s)	1052, 1356, 1998
BssMI	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
BssT1I	CCWWGG	1 cut(s)	1356
Bst2UI	CCWGG	5 cut(s)	1053, 1080, 1400, 1530, 1851
Bst4CI	ACNGT	5 cut(s)	80, 313, 389, 488, 1726
Bst6I	CTCTTC	2 cut(s)	869, 1146
BstAPI	GCANNNNNTGC	1 cut(s)	617
BstBI	TTCGAA	1 cut(s)	788
BstC8I	GCNNGC	2 cut(s)	1028, 1320
BstDEI	CTNAG	6 cut(s)	294, 631, 744, 1429, 1518, 1536
BstEII	GGTNACC	1 cut(s)	1877
BstF5I	GGATG	8 cut(s)	304, 408, 454, 1471, 1911, 1915, 1936, 1940
BstFNI	CGCG	2 cut(s)	53, 513
BstHHI	GCGC	2 cut(s)	53, 1263
BstKTI	GATC	5 cut(s)	815, 939, 1051, 1731, 1959
BstMAI	GTCTC	2 cut(s)	69, 256
BstMBI	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
BstMWI	GCNNNNNNNGC	6 cut(s)	50, 329, 617, 1191, 1319, 1338
BstNI	CCWGG	5 cut(s)	1053, 1080, 1400, 1530, 1851
BstNSI	RCATGY	2 cut(s)	1064, 1875
BstPI	GGTNACC	1 cut(s)	1877
BstSCI	CCNGG	6 cut(s)	815, 1051, 1078, 1398, 1528, 1849
BstSFI	CTRYAG	3 cut(s)	11, 462, 902
BstUI	CGCG	2 cut(s)	53, 513
BstV1I	GCAGC	5 cut(s)	319, 1169, 1690, 1933, 1996
BstV2I	GAAGAC	1 cut(s)	1628
BstX2I	RGATCY	2 cut(s)	812, 1048
BstYI	RGATCY	2 cut(s)	812, 1048
Bsu36I	CCTNAGG	1 cut(s)	744
BsuI	GTATCC	2 cut(s)	168, 788
BsuRI	GGCC	3 cut(s)	697, 1828, 1997
BtsCI	GGATG	8 cut(s)	304, 408, 454, 1471, 1911, 1915, 1936, 1940
BtsI	GCAGTG	1 cut(s)	1339
BtsIMutI	CAGTG	3 cut(s)	493, 1339, 1722
BtuMI	TCGCGA	1 cut(s)	513
BveI	ACCTGC	1 cut(s)	629
Cac8I	GCNNGC	2 cut(s)	1028, 1320
CaiI	CAGNNNCTG	1 cut(s)	1052
CfoI	GCGC	2 cut(s)	53, 1263
Cfr10I	RCCGGY	1 cut(s)	1881
Cfr13I	GGNCC	3 cut(s)	695, 1292, 1949
CseI	GACGC	1 cut(s)	1154
CsiI	ACCWGGT	1 cut(s)	1398
Csp6I	GTAC	4 cut(s)	767, 1069, 1641, 1743
CspAI	ACCGGT	1 cut(s)	1881
CspCI	CAANNNNNGTGG	2 cut(s)	1198, 1233
CviQI	GTAC	4 cut(s)	767, 1069, 1641, 1743
DdeI	CTNAG	6 cut(s)	294, 631, 744, 1429, 1518, 1536
DpnI	GATC	5 cut(s)	814, 938, 1050, 1730, 1958
DpnII	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
DrdI	GACNNNNNNGTC	1 cut(s)	392
DseDI	GACNNNNNNGTC	1 cut(s)	392
Eam1104I	CTCTTC	2 cut(s)	869, 1146
EarI	CTCTTC	2 cut(s)	869, 1146
Eco130I	CCWWGG	1 cut(s)	1356
Eco47I	GGWCC	2 cut(s)	1292, 1949
Eco57I	CTGAAG	2 cut(s)	1424, 1491
Eco81I	CCTNAGG	1 cut(s)	744
Eco91I	GGTNACC	1 cut(s)	1877
EcoO65I	GGTNACC	1 cut(s)	1877
EcoRII	CCWGG	5 cut(s)	1051, 1078, 1398, 1528, 1849
EcoT14I	CCWWGG	1 cut(s)	1356
EcoT22I	ATGCAT	1 cut(s)	1208
ErhI	CCWWGG	1 cut(s)	1356
Esp3I	CGTCTC	1 cut(s)	69
FbaI	TGATCA	1 cut(s)	1728
Fnu4HI	GCNGC	6 cut(s)	11, 333, 1183, 1704, 1922, 2010
FokI	GGATG	8 cut(s)	311, 415, 461, 1478, 1898, 1902, 1923, 1927
Fsp4HI	GCNGC	6 cut(s)	11, 333, 1183, 1704, 1922, 2010
FspBI	CTAG	9 cut(s)	24, 282, 392, 650, 774, 1179, 1319, 1524, 2062
GlaI	GCGC	2 cut(s)	52, 1262
GluI	GCNGC	6 cut(s)	11, 333, 1183, 1704, 1922, 2010
HaeIII	GGCC	3 cut(s)	697, 1828, 1997
HapII	CCGG	4 cut(s)	816, 1423, 1882, 1899
HgaI	GACGC	1 cut(s)	1154
HhaI	GCGC	2 cut(s)	53, 1263
Hin6I	GCGC	2 cut(s)	51, 1261
HinP1I	GCGC	2 cut(s)	51, 1261
HincII	GTYRAC	1 cut(s)	397
HindII	GTYRAC	1 cut(s)	397
HinfI	GANTC	6 cut(s)	353, 455, 887, 893, 1362, 1678
HpaII	CCGG	4 cut(s)	816, 1423, 1882, 1899
HphI	GGTGA	3 cut(s)	464, 1723, 1769
Hpy166II	GTNNAC	2 cut(s)	397, 664
Hpy188I	TCNGA	9 cut(s)	174, 436, 607, 892, 1089, 1174, 1256, 1443, 2002
Hpy188III	TCNNGA	5 cut(s)	164, 259, 512, 561, 1391
Hpy8I	GTNNAC	2 cut(s)	397, 664
HpyCH4III	ACNGT	5 cut(s)	80, 313, 389, 488, 1726
HpyF10VI	GCNNNNNNNGC	6 cut(s)	50, 329, 617, 1191, 1319, 1338
HpyF3I	CTNAG	6 cut(s)	294, 631, 744, 1429, 1518, 1536
HspAI	GCGC	2 cut(s)	51, 1261
KpnI	GGTACC	1 cut(s)	770
Ksp22I	TGATCA	1 cut(s)	1728
Kzo9I	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
LmnI	GCTCC	5 cut(s)	7, 819, 1057, 1338, 1711
Lsp1109I	GCAGC	5 cut(s)	319, 1169, 1690, 1933, 1996
LweI	GCATC	4 cut(s)	598, 959, 1215, 1456
MabI	ACCWGGT	1 cut(s)	1398
MaeI	CTAG	9 cut(s)	24, 282, 392, 650, 774, 1179, 1319, 1524, 2062
MaeIII	GTNAC	1 cut(s)	1877
MalI	GATC	5 cut(s)	814, 938, 1050, 1730, 1958
MboI	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
MfeI	CAATTG	1 cut(s)	375
MflI	RGATCY	2 cut(s)	812, 1048
MmeI	TCCRAC	1 cut(s)	1067
Mph1103I	ATGCAT	1 cut(s)	1208
MroXI	GAANNNNTTC	4 cut(s)	254, 897, 1097, 1485
MseI	TTAA	3 cut(s)	444, 528, 1016
MslI	CAYNNNNRTG	4 cut(s)	972, 1300, 1808, 1814
MspA1I	CMGCKG	1 cut(s)	107
MspI	CCGG	4 cut(s)	816, 1423, 1882, 1899
MspR9I	CCNGG	6 cut(s)	817, 1053, 1080, 1400, 1530, 1851
MunI	CAATTG	1 cut(s)	375
Mva1269I	GAATGC	1 cut(s)	139
MvaI	CCWGG	5 cut(s)	1053, 1080, 1400, 1530, 1851
MvnI	CGCG	2 cut(s)	53, 513
MwoI	GCNNNNNNNGC	6 cut(s)	50, 329, 617, 1191, 1319, 1338
NciI	CCSGG	1 cut(s)	817
NdeII	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
NheI	GCTAGC	1 cut(s)	1318
NlaIV	GGNNCC	3 cut(s)	768, 814, 821
NruI	TCGCGA	1 cut(s)	513
NsiI	ATGCAT	1 cut(s)	1208
NspI	RCATGY	2 cut(s)	1064, 1875
NspV	TTCGAA	1 cut(s)	788
PciI	ACATGT	1 cut(s)	1871
PctI	GAATGC	1 cut(s)	139
PdmI	GAANNNNTTC	4 cut(s)	254, 897, 1097, 1485
PfeI	GAWTC	6 cut(s)	353, 455, 887, 893, 1362, 1678
PflFI	GACNNNGTC	1 cut(s)	80
PfoI	TCCNGGA	2 cut(s)	815, 1849
PinAI	ACCGGT	1 cut(s)	1881
PkrI	GCNGC	6 cut(s)	12, 334, 1184, 1705, 1923, 2011
PscI	ACATGT	1 cut(s)	1871
Psp6I	CCWGG	5 cut(s)	1051, 1078, 1398, 1528, 1849
PspEI	GGTNACC	1 cut(s)	1877
PspGI	CCWGG	5 cut(s)	1051, 1078, 1398, 1528, 1849
PspN4I	GGNNCC	3 cut(s)	768, 814, 821
PspPI	GGNCC	3 cut(s)	695, 1292, 1949
PstI	CTGCAG	2 cut(s)	15, 466
PstNI	CAGNNNCTG	1 cut(s)	1052
PsuI	RGATCY	2 cut(s)	812, 1048
PsyI	GACNNNGTC	1 cut(s)	80
PvuII	CAGCTG	1 cut(s)	107
RruI	TCGCGA	1 cut(s)	513
RsaI	GTAC	4 cut(s)	768, 1070, 1642, 1744
RsaNI	GTAC	4 cut(s)	767, 1069, 1641, 1743
RseI	CAYNNNNRTG	4 cut(s)	972, 1300, 1808, 1814
SaqAI	TTAA	3 cut(s)	444, 528, 1016
SatI	GCNGC	6 cut(s)	11, 333, 1183, 1704, 1922, 2010
Sau3AI	GATC	5 cut(s)	812, 936, 1048, 1728, 1956
Sau96I	GGNCC	3 cut(s)	695, 1292, 1949
ScrFI	CCNGG	6 cut(s)	817, 1053, 1080, 1400, 1530, 1851
SexAI	ACCWGGT	1 cut(s)	1398
SfaNI	GCATC	4 cut(s)	598, 959, 1215, 1456
SfcI	CTRYAG	3 cut(s)	11, 462, 902
SfuI	TTCGAA	1 cut(s)	788
SinI	GGWCC	2 cut(s)	1292, 1949
SmiMI	CAYNNNNRTG	4 cut(s)	972, 1300, 1808, 1814
SmlI	CTYRAG	1 cut(s)	1145
SmoI	CTYRAG	1 cut(s)	1145
SpeI	ACTAGT	3 cut(s)	281, 649, 773
SsiI	CCGC	2 cut(s)	1919, 1947
SspI	AATATT	1 cut(s)	1448
SspMI	CTAG	9 cut(s)	24, 282, 392, 650, 774, 1179, 1319, 1524, 2062
StyD4I	CCNGG	6 cut(s)	815, 1051, 1078, 1398, 1528, 1849
StyI	CCWWGG	1 cut(s)	1356
TaaI	ACNGT	5 cut(s)	80, 313, 389, 488, 1726
TaqI	TCGA	4 cut(s)	84, 202, 788, 1306
TfiI	GAWTC	6 cut(s)	353, 455, 887, 893, 1362, 1678
Tru1I	TTAA	3 cut(s)	444, 528, 1016
Tru9I	TTAA	3 cut(s)	444, 528, 1016
TscAI	CASTG	3 cut(s)	493, 1339, 1729
TseI	GCWGC	6 cut(s)	10, 332, 1182, 1703, 1921, 2009
TspGWI	ACGGA	1 cut(s)	1158
TspRI	CASTG	3 cut(s)	493, 1339, 1729
Tth111I	GACNNNGTC	1 cut(s)	80
VpaK11BI	GGWCC	2 cut(s)	1292, 1949
XapI	RAATTY	2 cut(s)	229, 623
XceI	RCATGY	2 cut(s)	1064, 1875
XmnI	GAANNNNTTC	4 cut(s)	254, 897, 1097, 1485
XspI	CTAG	9 cut(s)	24, 282, 392, 650, 774, 1179, 1319, 1524, 2062
Zsp2I	ATGCAT	1 cut(s)	1208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.