Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0009664

Physical Location & Seq

Genomic Coordinates Reverse (-)

1788340 .. 1791768

Gene Structure 3429 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG025800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGCTAATGGTGGAGCTGCAGTCTTGTGCTAGATTGGTCAAGGCTTCTGCATTATGCGCGATAGAGGAAGGTATGAAAGGAGACGGCGTCGATGTTATTGCAGAGATTTCAGCTGAATTAGAAAGGGAAAGACAGAAGAATGCAGAACTTATGCAGAGAATACTAATTCTTGAAGCTCGGATACAGGAAAAAGAGAATGAACCTCCTCGAACAAATGGACAGGGCAGTTGCTCAAATTCAATGGAAAGAAACTTGAAGAAGTTCAAGAGACAGAAGATTGAACTCACTAGTAACACAACTGAGGATGGAAGTATAACTGTTGTCCAAGCTGAAATTGCTGCACAGAAGAAGCATCATATTGAATCCTATGCCCTTGAAGATCCAATTGTAGATGACCGTCTAGTCAACTGGATGAGCATGGAGGAAACACAGGTTTTGCTTTCTGAAAAAGCTAAGGATGGTGATTCAACTGCAGATTGTGATGAAACTGATGACAGTGATGATGAAGATGAAGATTATCGTGAAGAAGATGGTATTAACAATGACCATAAAGAAGCTGATGAAACTTCAAGACTTGTTGATGAACTGATTTATGAAGTTGCTGATAAGGGTTCAGATGCAGGGTGTGCAGAAATTTTCTCAGGTGCAGGTCAGCCACTATTTGAAAATGTGAACCGAGAAACCAATGAAGAACTACCAATAGGGCCAATTTGTAATGAGATGGAAATTAGAAACCAAAACAAGACAGAACCTAAGGATTTTGGGAGTTTCAAGGTACCAACTAGTATCCCAACTTCTACGAAGGAGTTTATTCATACAGGATCTGGGAGCCTATCACAACATAAAAAGCCTCCAAAGTTGGCATTTTGCCCAAAAGAAGTGAAGAGAATAATTGATTCGGAATCCCTTCTACAGAAAAATGCTCATTCACACACAATAAGGAAGATCATAGTTTTTGCATCTCTTGGTATAAGGCATGGTTGTGAAGATATATATGAATTAGACTTCAACCATTTTAGCATTTTAAGGAAGGGCGAGCAATACATATCTCCAACAGATCCTGGGGAGCATGTTCTGTATGAAAATCCTGGTGTTCGGAGGAAGGTATTCTATCCAAACCGAAAGAACCCTACACTATGTCCAGTTCAAATACTTGAGGAAGAGAAGGCTATGCGTCCGTCAGATCCTAGCTGCCCATCATGCTTATTTCTATGCATCAAGTATGGTGGAAGGACAAGAAACCTTCCCCAAAATGAATATGTCAGACAGCGCATGGGAAGAAACAAGCTAAAGTCTTTTGGGCCATTGATGTGTCGAATGGCAATGCTAGCTCATGTTCGCAGTGGGAGCTTCTTCTTCAAAGCCTTGGGAATCACACTTCTTTTCATGGCTGGTTTTCCTGATGACCTGGTTCAAAGGGAAACCAAATACCGGAACTTAGACTTGCTCCAGAAATATTACAGGGCAGATGAGGATGCTGAAGGAGAGGAATTATTTCTTGCATATCCTATGATAGATGATGATACTTTTACAACTATCTTGCTGTCTCAGCAGGCTAGTCCAGGTTCTCAGCAGTTTTGTGGCAAGACTTCTTCAACAAAAACAAAGGGAAAGAAACAGGCTCACTCTAAGCAGAAGACTTCATTCCCAAATAGTACATTTTCAAGCTCTGCACCTCAATTTGGACTAATGAATCAAGCCTCTATCCCCCCATTAGCTGCTCCACCAATCTCAAACACTGTGATCACCAATGCTGGTACTAATATCCCCTATCATAATCCAAACCCGTATCACCTTTTTCCTCCACAACCATCAAACACTTTCATGCCTATGGTATATTGGCCTCCCCCAAACACATTTTCTCCTGGACTACCTTATCAATCTACACATGGTTACCGGTCTTACCCTTCTGCCGGAAATTACTTCATCCATCCGCAGCCTTATTACAGCCATCCATCCTGCGGTCCATTGATCCCCAAAACGATAGAAGTAGCAAAGAAAAATGGCATGGCCTCGGAGGAAGCTGCTGATAGTGATTATGATTGTAGTTCAAGCAGTATAGAGCCAAAGAAGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

692

Amino Acids

77.62

Weight (kDa)

5.5

Isoelectric Point (pI)

48.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009664)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g02100 FvH4_3g02100 FvH4_3g02100 FvH4_3g02100 FvH4_3g02100
malus_domestica	MD05G1345700.v1.1 MD10G1321100.v1.1
prunus_persica	Prupe.4G021200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0003191
rosa_laevigata	RLG00000031084
rosa_multiflora	Rmu_sc0000146.1_g000035
rosa_roxburghii	Rroxscaffold_1G00072820
rosa_rugosa	Rorug04G0401200 Rorug04G0401300 Rorug04G0401300 Rorug04G0401300 Rorug04G0401400
rosa_samantha	Rh5AG026100 Rh5BG027300 Rh5CG028900 Rh5DG025800
rosa_wichuraiana	Rw5G002420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	401
Acc36I	ACCTGC	1 cut(s)	638
Acc65I	GGTACC	1 cut(s)	775
AccB1I	GGYRCC	1 cut(s)	775
AccII	CGCG	1 cut(s)	59
AciI	CCGC	2 cut(s)	1934, 1962
AclWI	GGATC	5 cut(s)	374, 829, 1052, 1178, 1966
AcsI	RAATTY	2 cut(s)	235, 633
AcuI	CTGAAG	1 cut(s)	1500
AcyI	GRCGYC	1 cut(s)	87
AfaI	GTAC	3 cut(s)	777, 1657, 1759
AfiI	CCNNNNNNNGG	4 cut(s)	1431, 1682, 1913, 1961
AgeI	ACCGGT	1 cut(s)	1896
AhlI	ACTAGT	2 cut(s)	287, 782
AjnI	CCWGG	5 cut(s)	1060, 1087, 1407, 1561, 1864
AjuI	GAANNNNNNNTTGG	2 cut(s)	1843, 1875
Alw26I	GTCTC	3 cut(s)	75, 262, 1551
AlwI	GGATC	5 cut(s)	374, 829, 1052, 1178, 1966
AlwNI	CAGNNNCTG	2 cut(s)	824, 1061
AoxI	GGCC	4 cut(s)	704, 1301, 1841, 2010
ApeKI	GCWGC	6 cut(s)	16, 338, 1191, 1718, 1936, 2024
ApoI	RAATTY	2 cut(s)	235, 633
AsiGI	ACCGGT	1 cut(s)	1896
Asp700I	GAANNNNTTC	4 cut(s)	260, 906, 1106, 1494
Asp718I	GGTACC	1 cut(s)	775
AspLEI	GCGC	2 cut(s)	59, 1272
AspS9I	GGNCC	3 cut(s)	704, 1301, 1964
AsuHPI	GGTGA	3 cut(s)	473, 1738, 1784
AsuNHI	GCTAGC	1 cut(s)	1327
AvaII	GGWCC	1 cut(s)	1964
AxyI	CCTNAGG	1 cut(s)	753
BanI	GGYRCC	1 cut(s)	775
BarI	GAAGNNNNNNTAC	4 cut(s)	165, 197, 778, 810
BbsI	GAAGAC	1 cut(s)	1643
BbvI	GCAGC	6 cut(s)	3, 325, 1178, 1705, 1948, 2011
BccI	CCATC	9 cut(s)	299, 452, 524, 715, 1204, 1819, 1938, 1959, 1963
BceAI	ACGGC	1 cut(s)	100
BcgI	CGANNNNNNTGC	2 cut(s)	80, 114
BciT130I	CCWGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
BciVI	GTATCC	2 cut(s)	174, 797
BclI	TGATCA	1 cut(s)	1743
BcoDI	GTCTC	3 cut(s)	75, 262, 1551
BcuI	ACTAGT	2 cut(s)	287, 782
BfaI	CTAG	8 cut(s)	30, 288, 401, 783, 1188, 1328, 1557, 2077
BfmI	CTRYAG	3 cut(s)	17, 471, 911
BfuAI	ACCTGC	1 cut(s)	638
BfuI	GTATCC	2 cut(s)	174, 797
BisI	GCNGC	6 cut(s)	17, 339, 1192, 1719, 1937, 2025
BlsI	GCNGC	6 cut(s)	18, 340, 1193, 1720, 1938, 2026
Bme1390I	CCNGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
Bme18I	GGWCC	1 cut(s)	1964
BmgT120I	GGNCC	3 cut(s)	704, 1301, 1964
BmiI	GGNNCC	2 cut(s)	777, 830
BmrFI	CCNGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
BmsI	GCATC	5 cut(s)	361, 607, 968, 1224, 1465
BmtI	GCTAGC	1 cut(s)	1331
BpiI	GAAGAC	1 cut(s)	1643
BpmI	CTGGAG	1 cut(s)	1433
Bpu10I	CCTNAGC	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	1175
BsaHI	GRCGYC	1 cut(s)	87
BsaJI	CCNNGG	3 cut(s)	1061, 1365, 2013
BsaWI	WCCGGW	2 cut(s)	1431, 1896
BsaXI	ACNNNNNCTCC	6 cut(s)	5, 35, 72, 102, 1846, 1876
Bsc4I	CCNNNNNNNGG	4 cut(s)	1431, 1682, 1913, 1961
Bse118I	RCCGGY	1 cut(s)	1896
Bse1I	ACTGG	2 cut(s)	413, 1142
Bse21I	CCTNAGG	1 cut(s)	753
Bse3DI	GCAATG	1 cut(s)	1329
BseBI	CCWGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
BseDI	CCNNGG	3 cut(s)	1061, 1365, 2013
BseGI	GGATG	8 cut(s)	310, 417, 463, 1480, 1926, 1930, 1951, 1955
BseLI	CCNNNNNNNGG	4 cut(s)	1431, 1682, 1913, 1961
BseMI	GCAATG	1 cut(s)	1329
BseMII	CTCAG	4 cut(s)	291, 654, 1562, 1583
BseNI	ACTGG	2 cut(s)	413, 1142
BseRI	GAGGAG	1 cut(s)	195
BseXI	GCAGC	6 cut(s)	3, 325, 1178, 1705, 1948, 2011
BsgI	GTGCAG	4 cut(s)	324, 648, 666, 1656
Bsh1236I	CGCG	1 cut(s)	59
BshFI	GGCC	4 cut(s)	706, 1303, 1843, 2012
BshNI	GGYRCC	1 cut(s)	775
BshTI	ACCGGT	1 cut(s)	1896
BsiSI	CCGG	3 cut(s)	1432, 1897, 1914
BslI	CCNNNNNNNGG	4 cut(s)	1431, 1682, 1913, 1961
BsmAI	GTCTC	3 cut(s)	75, 262, 1551
BsmBI	CGTCTC	1 cut(s)	75
BsmI	GAATGC	1 cut(s)	145
BsnI	GGCC	4 cut(s)	706, 1303, 1843, 2012
Bsp143I	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
BspACI	CCGC	2 cut(s)	1934, 1962
BspANI	GGCC	4 cut(s)	706, 1303, 1843, 2012
BspCNI	CTCAG	4 cut(s)	292, 653, 1561, 1582
BspFNI	CGCG	1 cut(s)	59
BspLI	GGNNCC	2 cut(s)	777, 830
BspMAI	CTGCAG	2 cut(s)	21, 475
BspMI	ACCTGC	1 cut(s)	638
BspOI	GCTAGC	1 cut(s)	1331
BspPI	GGATC	5 cut(s)	374, 829, 1052, 1178, 1966
BspT107I	GGYRCC	1 cut(s)	775
BsrDI	GCAATG	1 cut(s)	1329
BsrFI	RCCGGY	1 cut(s)	1896
BsrI	ACTGG	2 cut(s)	413, 1142
BssAI	RCCGGY	1 cut(s)	1896
BssECI	CCNNGG	3 cut(s)	1061, 1365, 2013
BssMI	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
BssNI	GRCGYC	1 cut(s)	87
BssT1I	CCWWGG	1 cut(s)	1365
Bst2UI	CCWGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
Bst4CI	ACNGT	4 cut(s)	319, 398, 497, 1741
Bst6I	CTCTTC	2 cut(s)	878, 1155
BstACI	GRCGYC	1 cut(s)	87
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstC8I	GCNNGC	3 cut(s)	1037, 1329, 1554
BstDEI	CTNAG	8 cut(s)	300, 453, 640, 753, 1438, 1548, 1569, 1629
BstEII	GGTNACC	1 cut(s)	1892
BstF5I	GGATG	8 cut(s)	310, 417, 463, 1480, 1926, 1930, 1951, 1955
BstFNI	CGCG	1 cut(s)	59
BstHHI	GCGC	2 cut(s)	59, 1272
BstKTI	GATC	7 cut(s)	382, 824, 948, 1060, 1186, 1746, 1974
BstMAI	GTCTC	3 cut(s)	75, 262, 1551
BstMBI	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
BstMWI	GCNNNNNNNGC	7 cut(s)	56, 335, 626, 1200, 1328, 1347, 1549
BstNI	CCWGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
BstNSI	RCATGY	1 cut(s)	1073
BstPI	GGTNACC	1 cut(s)	1892
BstSCI	CCNGG	5 cut(s)	1060, 1087, 1407, 1561, 1864
BstSFI	CTRYAG	3 cut(s)	17, 471, 911
BstUI	CGCG	1 cut(s)	59
BstV1I	GCAGC	6 cut(s)	3, 325, 1178, 1705, 1948, 2011
BstV2I	GAAGAC	1 cut(s)	1643
BstX2I	RGATCY	4 cut(s)	379, 821, 1057, 1183
BstYI	RGATCY	4 cut(s)	379, 821, 1057, 1183
Bsu36I	CCTNAGG	1 cut(s)	753
BsuI	GTATCC	2 cut(s)	174, 797
BsuRI	GGCC	4 cut(s)	706, 1303, 1843, 2012
BtsCI	GGATG	8 cut(s)	310, 417, 463, 1480, 1926, 1930, 1951, 1955
BtsI	GCAGTG	1 cut(s)	1348
BtsIMutI	CAGTG	3 cut(s)	502, 1348, 1737
BveI	ACCTGC	1 cut(s)	638
Cac8I	GCNNGC	3 cut(s)	1037, 1329, 1554
CaiI	CAGNNNCTG	2 cut(s)	824, 1061
CfoI	GCGC	2 cut(s)	59, 1272
Cfr10I	RCCGGY	1 cut(s)	1896
Cfr13I	GGNCC	3 cut(s)	704, 1301, 1964
CseI	GACGC	2 cut(s)	76, 1163
CsiI	ACCWGGT	1 cut(s)	1407
Csp6I	GTAC	3 cut(s)	776, 1656, 1758
CspAI	ACCGGT	1 cut(s)	1896
CspCI	CAANNNNNGTGG	2 cut(s)	1207, 1242
CviQI	GTAC	3 cut(s)	776, 1656, 1758
DdeI	CTNAG	8 cut(s)	300, 453, 640, 753, 1438, 1548, 1569, 1629
DpnI	GATC	7 cut(s)	381, 823, 947, 1059, 1185, 1745, 1973
DpnII	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
DrdI	GACNNNNNNGTC	1 cut(s)	401
DseDI	GACNNNNNNGTC	1 cut(s)	401
Eam1104I	CTCTTC	2 cut(s)	878, 1155
EarI	CTCTTC	2 cut(s)	878, 1155
Eco130I	CCWWGG	1 cut(s)	1365
Eco47I	GGWCC	1 cut(s)	1964
Eco57I	CTGAAG	1 cut(s)	1500
Eco81I	CCTNAGG	1 cut(s)	753
Eco91I	GGTNACC	1 cut(s)	1892
EcoO65I	GGTNACC	1 cut(s)	1892
EcoRII	CCWGG	5 cut(s)	1060, 1087, 1407, 1561, 1864
EcoT14I	CCWWGG	1 cut(s)	1365
EcoT22I	ATGCAT	1 cut(s)	1217
ErhI	CCWWGG	1 cut(s)	1365
Esp3I	CGTCTC	1 cut(s)	75
FbaI	TGATCA	1 cut(s)	1743
Fnu4HI	GCNGC	6 cut(s)	17, 339, 1192, 1719, 1937, 2025
FokI	GGATG	8 cut(s)	317, 424, 470, 1487, 1913, 1917, 1938, 1942
Fsp4HI	GCNGC	6 cut(s)	17, 339, 1192, 1719, 1937, 2025
FspBI	CTAG	8 cut(s)	30, 288, 401, 783, 1188, 1328, 1557, 2077
GlaI	GCGC	2 cut(s)	58, 1271
GluI	GCNGC	6 cut(s)	17, 339, 1192, 1719, 1937, 2025
GsuI	CTGGAG	1 cut(s)	1433
HaeIII	GGCC	4 cut(s)	706, 1303, 1843, 2012
HapII	CCGG	3 cut(s)	1432, 1897, 1914
HgaI	GACGC	2 cut(s)	76, 1163
HhaI	GCGC	2 cut(s)	59, 1272
Hin1I	GRCGYC	1 cut(s)	87
Hin6I	GCGC	2 cut(s)	57, 1270
HinP1I	GCGC	2 cut(s)	57, 1270
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HinfI	GANTC	6 cut(s)	362, 464, 896, 902, 1371, 1693
HpaII	CCGG	3 cut(s)	1432, 1897, 1914
HphI	GGTGA	3 cut(s)	473, 1738, 1784
Hpy166II	GTNNAC	2 cut(s)	406, 673
Hpy188I	TCNGA	8 cut(s)	180, 445, 616, 901, 1098, 1183, 1265, 2017
Hpy188III	TCNNGA	6 cut(s)	170, 265, 521, 570, 1400, 1450
Hpy8I	GTNNAC	2 cut(s)	406, 673
Hpy99I	CGWCG	1 cut(s)	92
HpyCH4III	ACNGT	4 cut(s)	319, 398, 497, 1741
HpyF10VI	GCNNNNNNNGC	7 cut(s)	56, 335, 626, 1200, 1328, 1347, 1549
HpyF3I	CTNAG	8 cut(s)	300, 453, 640, 753, 1438, 1548, 1569, 1629
Hsp92I	GRCGYC	1 cut(s)	87
HspAI	GCGC	2 cut(s)	57, 1270
KpnI	GGTACC	1 cut(s)	779
Ksp22I	TGATCA	1 cut(s)	1743
Kzo9I	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
LmnI	GCTCC	6 cut(s)	13, 828, 1066, 1347, 1452, 1726
Lsp1109I	GCAGC	6 cut(s)	3, 325, 1178, 1705, 1948, 2011
LweI	GCATC	5 cut(s)	361, 607, 968, 1224, 1465
MabI	ACCWGGT	1 cut(s)	1407
MaeI	CTAG	8 cut(s)	30, 288, 401, 783, 1188, 1328, 1557, 2077
MaeIII	GTNAC	2 cut(s)	290, 1892
MalI	GATC	7 cut(s)	381, 823, 947, 1059, 1185, 1745, 1973
MboI	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
MfeI	CAATTG	1 cut(s)	384
MflI	RGATCY	4 cut(s)	379, 821, 1057, 1183
MmeI	TCCRAC	1 cut(s)	1076
Mph1103I	ATGCAT	1 cut(s)	1217
MroXI	GAANNNNTTC	4 cut(s)	260, 906, 1106, 1494
MseI	TTAA	2 cut(s)	537, 1025
MslI	CAYNNNNRTG	4 cut(s)	981, 1309, 1823, 1829
MspA1I	CMGCKG	1 cut(s)	113
MspI	CCGG	3 cut(s)	1432, 1897, 1914
MspR9I	CCNGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
MunI	CAATTG	1 cut(s)	384
Mva1269I	GAATGC	1 cut(s)	145
MvaI	CCWGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
MvnI	CGCG	1 cut(s)	59
MwoI	GCNNNNNNNGC	7 cut(s)	56, 335, 626, 1200, 1328, 1347, 1549
NdeII	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
NheI	GCTAGC	1 cut(s)	1327
NlaIV	GGNNCC	2 cut(s)	777, 830
NsiI	ATGCAT	1 cut(s)	1217
NspI	RCATGY	1 cut(s)	1073
PctI	GAATGC	1 cut(s)	145
PdmI	GAANNNNTTC	4 cut(s)	260, 906, 1106, 1494
PfeI	GAWTC	6 cut(s)	362, 464, 896, 902, 1371, 1693
PflFI	GACNNNGTC	1 cut(s)	86
PfoI	TCCNGGA	1 cut(s)	1864
PinAI	ACCGGT	1 cut(s)	1896
PkrI	GCNGC	6 cut(s)	18, 340, 1193, 1720, 1938, 2026
Psp6I	CCWGG	5 cut(s)	1060, 1087, 1407, 1561, 1864
PspEI	GGTNACC	1 cut(s)	1892
PspGI	CCWGG	5 cut(s)	1060, 1087, 1407, 1561, 1864
PspN4I	GGNNCC	2 cut(s)	777, 830
PspPI	GGNCC	3 cut(s)	704, 1301, 1964
PstI	CTGCAG	2 cut(s)	21, 475
PstNI	CAGNNNCTG	2 cut(s)	824, 1061
PsuI	RGATCY	4 cut(s)	379, 821, 1057, 1183
PsyI	GACNNNGTC	1 cut(s)	86
PvuII	CAGCTG	1 cut(s)	113
RsaI	GTAC	3 cut(s)	777, 1657, 1759
RsaNI	GTAC	3 cut(s)	776, 1656, 1758
RseI	CAYNNNNRTG	4 cut(s)	981, 1309, 1823, 1829
SaqAI	TTAA	2 cut(s)	537, 1025
SatI	GCNGC	6 cut(s)	17, 339, 1192, 1719, 1937, 2025
Sau3AI	GATC	7 cut(s)	379, 821, 945, 1057, 1183, 1743, 1971
Sau96I	GGNCC	3 cut(s)	704, 1301, 1964
ScrFI	CCNGG	5 cut(s)	1062, 1089, 1409, 1563, 1866
SexAI	ACCWGGT	1 cut(s)	1407
SfaNI	GCATC	5 cut(s)	361, 607, 968, 1224, 1465
SfcI	CTRYAG	3 cut(s)	17, 471, 911
SinI	GGWCC	1 cut(s)	1964
SmiMI	CAYNNNNRTG	4 cut(s)	981, 1309, 1823, 1829
SmlI	CTYRAG	1 cut(s)	1154
SmoI	CTYRAG	1 cut(s)	1154
SpeI	ACTAGT	2 cut(s)	287, 782
SsiI	CCGC	2 cut(s)	1934, 1962
SspI	AATATT	1 cut(s)	1457
SspMI	CTAG	8 cut(s)	30, 288, 401, 783, 1188, 1328, 1557, 2077
StyD4I	CCNGG	5 cut(s)	1060, 1087, 1407, 1561, 1864
StyI	CCWWGG	1 cut(s)	1365
TaaI	ACNGT	4 cut(s)	319, 398, 497, 1741
TaqI	TCGA	3 cut(s)	90, 208, 1315
TatI	WGTACW	1 cut(s)	1655
TfiI	GAWTC	6 cut(s)	362, 464, 896, 902, 1371, 1693
Tru1I	TTAA	2 cut(s)	537, 1025
Tru9I	TTAA	2 cut(s)	537, 1025
TscAI	CASTG	3 cut(s)	502, 1348, 1744
TseI	GCWGC	6 cut(s)	16, 338, 1191, 1718, 1936, 2024
TspGWI	ACGGA	1 cut(s)	1167
TspRI	CASTG	3 cut(s)	502, 1348, 1744
Tth111I	GACNNNGTC	1 cut(s)	86
VpaK11BI	GGWCC	1 cut(s)	1964
XapI	RAATTY	2 cut(s)	235, 633
XceI	RCATGY	1 cut(s)	1073
XmnI	GAANNNNTTC	4 cut(s)	260, 906, 1106, 1494
XspI	CTAG	8 cut(s)	30, 288, 401, 783, 1188, 1328, 1557, 2077
Zsp2I	ATGCAT	1 cut(s)	1217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.