Transketolase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_ssc0000252.1_g000037 |
| rosa_roxburghii | Rroxscaffold_2G00080210 Rroxscaffold_2G00080430 |
| rosa_samantha | Rh2CG610700 Rh2CG611900 Rh2DG659000 Rh2DG659600 Rh2DG659900 |
| rosa_wichuraiana | Rw2G052270 Rw2G052310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 123, 225 |
| AcoI | YGGCCR | 1 cut(s) | 25 |
| AgsI | TTSAA | 2 cut(s) | 80, 203 |
| AluBI | AGCT | 3 cut(s) | 74, 83, 174 |
| AluI | AGCT | 3 cut(s) | 74, 83, 174 |
| AlwI | GGATC | 2 cut(s) | 123, 225 |
| AoxI | GGCC | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 1 cut(s) | 191 |
| BalI | TGGCCA | 1 cut(s) | 27 |
| BfaI | CTAG | 1 cut(s) | 235 |
| Bse1I | ACTGG | 1 cut(s) | 144 |
| BseNI | ACTGG | 1 cut(s) | 144 |
| BshFI | GGCC | 1 cut(s) | 27 |
| BsmI | GAATGC | 1 cut(s) | 97 |
| BsnI | GGCC | 1 cut(s) | 27 |
| Bsp143I | GATC | 3 cut(s) | 119, 128, 230 |
| BspANI | GGCC | 1 cut(s) | 27 |
| BspPI | GGATC | 2 cut(s) | 123, 225 |
| BsrI | ACTGG | 1 cut(s) | 144 |
| BssMI | GATC | 3 cut(s) | 119, 128, 230 |
| Bst6I | CTCTTC | 1 cut(s) | 110 |
| BstC8I | GCNNGC | 1 cut(s) | 172 |
| BstDEI | CTNAG | 1 cut(s) | 227 |
| BstKTI | GATC | 3 cut(s) | 122, 131, 233 |
| BstMBI | GATC | 3 cut(s) | 119, 128, 230 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 33, 80, 101 |
| BstX2I | RGATCY | 2 cut(s) | 128, 230 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 139 |
| BstYI | RGATCY | 2 cut(s) | 128, 230 |
| BsuRI | GGCC | 1 cut(s) | 27 |
| Cac8I | GCNNGC | 1 cut(s) | 172 |
| CviAII | CATG | 1 cut(s) | 43 |
| CviJI | RGCY | 6 cut(s) | 27, 36, 74, 83, 174, 196 |
| CviKI_1 | RGCY | 6 cut(s) | 27, 36, 74, 83, 174, 196 |
| DdeI | CTNAG | 1 cut(s) | 227 |
| DpnI | GATC | 3 cut(s) | 121, 130, 232 |
| DpnII | GATC | 3 cut(s) | 119, 128, 230 |
| EaeI | YGGCCR | 1 cut(s) | 25 |
| Eam1104I | CTCTTC | 1 cut(s) | 110 |
| EarI | CTCTTC | 1 cut(s) | 110 |
| FaeI | CATG | 1 cut(s) | 46 |
| FaiI | YATR | 7 cut(s) | 24, 30, 32, 44, 111, 167, 177 |
| FatI | CATG | 1 cut(s) | 42 |
| FspBI | CTAG | 1 cut(s) | 235 |
| HaeIII | GGCC | 1 cut(s) | 27 |
| Hin1II | CATG | 1 cut(s) | 46 |
| HinfI | GANTC | 1 cut(s) | 151 |
| HphI | GGTGA | 1 cut(s) | 191 |
| Hpy188I | TCNGA | 1 cut(s) | 230 |
| Hpy188III | TCNNGA | 1 cut(s) | 77 |
| HpyAV | CCTTC | 1 cut(s) | 232 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 33, 80, 101 |
| HpyF3I | CTNAG | 1 cut(s) | 227 |
| Hsp92II | CATG | 1 cut(s) | 46 |
| Kzo9I | GATC | 3 cut(s) | 119, 128, 230 |
| LpnPI | CCDG | 3 cut(s) | 21, 62, 125 |
| MaeI | CTAG | 1 cut(s) | 235 |
| MaeIII | GTNAC | 1 cut(s) | 214 |
| MalI | GATC | 3 cut(s) | 121, 130, 232 |
| MboI | GATC | 3 cut(s) | 119, 128, 230 |
| MboII | GAAGA | 1 cut(s) | 127 |
| MfeI | CAATTG | 1 cut(s) | 198 |
| MflI | RGATCY | 2 cut(s) | 128, 230 |
| MlsI | TGGCCA | 1 cut(s) | 27 |
| MluCI | AATT | 3 cut(s) | 162, 198, 204 |
| MluNI | TGGCCA | 1 cut(s) | 27 |
| MnlI | CCTC | 2 cut(s) | 165, 236 |
| Mox20I | TGGCCA | 1 cut(s) | 27 |
| MscI | TGGCCA | 1 cut(s) | 27 |
| MseI | TTAA | 1 cut(s) | 59 |
| Msp20I | TGGCCA | 1 cut(s) | 27 |
| MunI | CAATTG | 1 cut(s) | 198 |
| Mva1269I | GAATGC | 1 cut(s) | 97 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 33, 80, 101 |
| NdeII | GATC | 3 cut(s) | 119, 128, 230 |
| NlaIII | CATG | 1 cut(s) | 46 |
| PctI | GAATGC | 1 cut(s) | 97 |
| PfeI | GAWTC | 1 cut(s) | 151 |
| PsuI | RGATCY | 2 cut(s) | 128, 230 |
| SaqAI | TTAA | 1 cut(s) | 59 |
| Sau3AI | GATC | 3 cut(s) | 119, 128, 230 |
| SetI | ASST | 4 cut(s) | 20, 76, 85, 176 |
| SgeI | CNNG | 9 cut(s) | 20, 31, 55, 61, 89, 138, 152, 183, 199 |
| Sse9I | AATT | 3 cut(s) | 162, 198, 204 |
| SspMI | CTAG | 1 cut(s) | 235 |
| TasI | AATT | 3 cut(s) | 162, 198, 204 |
| TfiI | GAWTC | 1 cut(s) | 151 |
| Tru1I | TTAA | 1 cut(s) | 59 |
| Tru9I | TTAA | 1 cut(s) | 59 |
| XspI | CTAG | 1 cut(s) | 235 |