Transketolase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_ssc0000252.1_g000037 |
| rosa_roxburghii | Rroxscaffold_2G00080210 Rroxscaffold_2G00080430 |
| rosa_samantha | Rh2CG610700 Rh2CG611900 Rh2DG659000 Rh2DG659600 Rh2DG659900 |
| rosa_wichuraiana | Rw2G052270 Rw2G052310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 228 |
| AciI | CCGC | 1 cut(s) | 174 |
| AcoI | YGGCCR | 1 cut(s) | 28 |
| AcuI | CTGAAG | 1 cut(s) | 167 |
| AcvI | CACGTG | 1 cut(s) | 48 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 180 |
| AgsI | TTSAA | 2 cut(s) | 83, 110 |
| AluBI | AGCT | 5 cut(s) | 77, 86, 137, 145, 169 |
| AluI | AGCT | 5 cut(s) | 77, 86, 137, 145, 169 |
| AoxI | GGCC | 2 cut(s) | 28, 216 |
| AspS9I | GGNCC | 1 cut(s) | 217 |
| AsuHPI | GGTGA | 1 cut(s) | 176 |
| BalI | TGGCCA | 1 cut(s) | 30 |
| BbrPI | CACGTG | 1 cut(s) | 48 |
| BccI | CCATC | 2 cut(s) | 20, 161 |
| BfmI | CTRYAG | 1 cut(s) | 138 |
| BmgT120I | GGNCC | 1 cut(s) | 217 |
| BsaAI | YACGTR | 1 cut(s) | 48 |
| BsaJI | CCNNGG | 1 cut(s) | 21 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 180 |
| Bse1I | ACTGG | 1 cut(s) | 166 |
| BseDI | CCNNGG | 1 cut(s) | 21 |
| BseGI | GGATG | 1 cut(s) | 31 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BseNI | ACTGG | 1 cut(s) | 166 |
| BshFI | GGCC | 2 cut(s) | 30, 218 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 180 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| BsnI | GGCC | 2 cut(s) | 30, 218 |
| BspACI | CCGC | 1 cut(s) | 174 |
| BspANI | GGCC | 2 cut(s) | 30, 218 |
| BsrI | ACTGG | 1 cut(s) | 166 |
| BssECI | CCNNGG | 1 cut(s) | 21 |
| BssT1I | CCWWGG | 1 cut(s) | 21 |
| Bst6I | CTCTTC | 1 cut(s) | 113 |
| BstBAI | YACGTR | 1 cut(s) | 48 |
| BstF5I | GGATG | 1 cut(s) | 31 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 36, 83, 134 |
| BstSFI | CTRYAG | 1 cut(s) | 138 |
| BsuRI | GGCC | 2 cut(s) | 30, 218 |
| BtsCI | GGATG | 1 cut(s) | 31 |
| BtsIMutI | CAGTG | 1 cut(s) | 159 |
| Cfr13I | GGNCC | 1 cut(s) | 217 |
| CviJI | RGCY | 8 cut(s) | 30, 39, 77, 86, 137, 145, 169, 218 |
| CviKI_1 | RGCY | 8 cut(s) | 30, 39, 77, 86, 137, 145, 169, 218 |
| EaeI | YGGCCR | 1 cut(s) | 28 |
| Eam1104I | CTCTTC | 1 cut(s) | 113 |
| EarI | CTCTTC | 1 cut(s) | 113 |
| Eco130I | CCWWGG | 1 cut(s) | 21 |
| Eco57I | CTGAAG | 1 cut(s) | 167 |
| Eco72I | CACGTG | 1 cut(s) | 48 |
| EcoT14I | CCWWGG | 1 cut(s) | 21 |
| ErhI | CCWWGG | 1 cut(s) | 21 |
| FaiI | YATR | 6 cut(s) | 33, 35, 114, 126, 207, 228 |
| FauI | CCCGC | 1 cut(s) | 181 |
| FokI | GGATG | 1 cut(s) | 38 |
| HaeIII | GGCC | 2 cut(s) | 30, 218 |
| HinfI | GANTC | 1 cut(s) | 199 |
| HphI | GGTGA | 1 cut(s) | 176 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 196 |
| HpyCH4IV | ACGT | 1 cut(s) | 47 |
| HpyCH4V | TGCA | 1 cut(s) | 128 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 36, 83, 134 |
| HpySE526I | ACGT | 1 cut(s) | 47 |
| LpnPI | CCDG | 5 cut(s) | 24, 65, 147, 162, 209 |
| MaeII | ACGT | 1 cut(s) | 47 |
| MaeIII | GTNAC | 1 cut(s) | 208 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MlsI | TGGCCA | 1 cut(s) | 30 |
| MluCI | AATT | 1 cut(s) | 222 |
| MluNI | TGGCCA | 1 cut(s) | 30 |
| MnlI | CCTC | 2 cut(s) | 114, 124 |
| Mox20I | TGGCCA | 1 cut(s) | 30 |
| MscI | TGGCCA | 1 cut(s) | 30 |
| MseI | TTAA | 1 cut(s) | 62 |
| Msp20I | TGGCCA | 1 cut(s) | 30 |
| MspA1I | CMGCKG | 1 cut(s) | 176 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 36, 83, 134 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PfeI | GAWTC | 1 cut(s) | 199 |
| PmaCI | CACGTG | 1 cut(s) | 48 |
| PmlI | CACGTG | 1 cut(s) | 48 |
| Ppu21I | YACGTR | 1 cut(s) | 48 |
| PsiI | TTATAA | 1 cut(s) | 228 |
| PspCI | CACGTG | 1 cut(s) | 48 |
| PspPI | GGNCC | 1 cut(s) | 217 |
| SaqAI | TTAA | 1 cut(s) | 62 |
| Sau96I | GGNCC | 1 cut(s) | 217 |
| SetI | ASST | 8 cut(s) | 23, 50, 79, 88, 125, 139, 147, 171 |
| SfcI | CTRYAG | 1 cut(s) | 138 |
| Sse9I | AATT | 1 cut(s) | 222 |
| SsiI | CCGC | 1 cut(s) | 174 |
| StyI | CCWWGG | 1 cut(s) | 21 |
| TaiI | ACGT | 1 cut(s) | 50 |
| TasI | AATT | 1 cut(s) | 222 |
| TfiI | GAWTC | 1 cut(s) | 199 |
| Tru1I | TTAA | 1 cut(s) | 62 |
| Tru9I | TTAA | 1 cut(s) | 62 |
| TscAI | CASTG | 1 cut(s) | 166 |
| TspDTI | ATGAA | 1 cut(s) | 191 |
| TspRI | CASTG | 1 cut(s) | 166 |