No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g29300 |
| malus_domestica | MD17G1216200.v1.1 |
| prunus_persica | Prupe.3G092300_v2.0.a1 |
| pyrus_communis | pycom17g22080 |
| rosa_chinensis | RchiOBHm_Chr2g0134481 |
| rosa_laevigata | RLG00000019395 |
| rosa_multiflora | Rmu_sc0005464.1_g000026 |
| rosa_roxburghii | Rroxscaffold_2G00110180 |
| rosa_rugosa | Rorug02G0317400 |
| rosa_samantha | Rh2AG375800 Rh2BG375800 Rh2CG354000 Rh2DG393100 |
| rosa_wichuraiana | Rw2G030140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 460 |
| AfaI | GTAC | 1 cut(s) | 493 |
| AgsI | TTSAA | 6 cut(s) | 13, 36, 201, 263, 293, 406 |
| AhlI | ACTAGT | 1 cut(s) | 71 |
| AluBI | AGCT | 4 cut(s) | 46, 170, 236, 488 |
| AluI | AGCT | 4 cut(s) | 46, 170, 236, 488 |
| Alw21I | GWGCWC | 1 cut(s) | 248 |
| Alw26I | GTCTC | 1 cut(s) | 419 |
| AlwI | GGATC | 1 cut(s) | 460 |
| AspS9I | GGNCC | 1 cut(s) | 150 |
| AvaII | GGWCC | 1 cut(s) | 150 |
| Bbv12I | GWGCWC | 1 cut(s) | 248 |
| BccI | CCATC | 2 cut(s) | 53, 404 |
| BclI | TGATCA | 1 cut(s) | 354 |
| BcoDI | GTCTC | 1 cut(s) | 419 |
| BcuI | ACTAGT | 1 cut(s) | 71 |
| BfaI | CTAG | 3 cut(s) | 72, 252, 485 |
| BglII | AGATCT | 1 cut(s) | 481 |
| Bme18I | GGWCC | 1 cut(s) | 150 |
| BmgT120I | GGNCC | 1 cut(s) | 150 |
| BpuEI | CTTGAG | 1 cut(s) | 383 |
| BsaI | GGTCTC | 1 cut(s) | 419 |
| BsaJI | CCNNGG | 1 cut(s) | 153 |
| BseDI | CCNNGG | 1 cut(s) | 153 |
| BseGI | GGATG | 1 cut(s) | 472 |
| BseRI | GAGGAG | 1 cut(s) | 238 |
| BsgI | GTGCAG | 1 cut(s) | 354 |
| BsiHKAI | GWGCWC | 1 cut(s) | 248 |
| BsmAI | GTCTC | 1 cut(s) | 419 |
| Bso31I | GGTCTC | 1 cut(s) | 419 |
| Bsp1286I | GDGCHC | 1 cut(s) | 248 |
| Bsp143I | GATC | 3 cut(s) | 354, 452, 481 |
| BspPI | GGATC | 1 cut(s) | 460 |
| BspTNI | GGTCTC | 1 cut(s) | 419 |
| BssECI | CCNNGG | 1 cut(s) | 153 |
| BssMI | GATC | 3 cut(s) | 354, 452, 481 |
| BssT1I | CCWWGG | 1 cut(s) | 153 |
| Bst4CI | ACNGT | 1 cut(s) | 243 |
| Bst6I | CTCTTC | 1 cut(s) | 436 |
| BstC8I | GCNNGC | 1 cut(s) | 67 |
| BstDEI | CTNAG | 2 cut(s) | 39, 133 |
| BstF5I | GGATG | 1 cut(s) | 472 |
| BstKTI | GATC | 3 cut(s) | 357, 455, 484 |
| BstMAI | GTCTC | 1 cut(s) | 419 |
| BstMBI | GATC | 3 cut(s) | 354, 452, 481 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 167 |
| BstX2I | RGATCY | 1 cut(s) | 481 |
| BstYI | RGATCY | 1 cut(s) | 481 |
| BtsCI | GGATG | 1 cut(s) | 472 |
| BtsI | GCAGTG | 1 cut(s) | 500 |
| BtsIMutI | CAGTG | 1 cut(s) | 500 |
| Cac8I | GCNNGC | 1 cut(s) | 67 |
| Cfr13I | GGNCC | 1 cut(s) | 150 |
| Csp6I | GTAC | 1 cut(s) | 492 |
| CviJI | RGCY | 6 cut(s) | 16, 46, 161, 170, 236, 488 |
| CviKI_1 | RGCY | 6 cut(s) | 16, 46, 161, 170, 236, 488 |
| CviQI | GTAC | 1 cut(s) | 492 |
| DdeI | CTNAG | 2 cut(s) | 39, 133 |
| DpnI | GATC | 3 cut(s) | 356, 454, 483 |
| DpnII | GATC | 3 cut(s) | 354, 452, 481 |
| Eam1104I | CTCTTC | 1 cut(s) | 436 |
| EarI | CTCTTC | 1 cut(s) | 436 |
| Eco130I | CCWWGG | 1 cut(s) | 153 |
| Eco31I | GGTCTC | 1 cut(s) | 419 |
| Eco47I | GGWCC | 1 cut(s) | 150 |
| EcoT14I | CCWWGG | 1 cut(s) | 153 |
| ErhI | CCWWGG | 1 cut(s) | 153 |
| FaiI | YATR | 4 cut(s) | 31, 173, 311, 367 |
| FbaI | TGATCA | 1 cut(s) | 354 |
| FokI | GGATG | 1 cut(s) | 479 |
| FspBI | CTAG | 3 cut(s) | 72, 252, 485 |
| HincII | GTYRAC | 1 cut(s) | 513 |
| HindII | GTYRAC | 1 cut(s) | 513 |
| HindIII | AAGCTT | 1 cut(s) | 234 |
| HinfI | GANTC | 4 cut(s) | 54, 143, 286, 382 |
| HpaI | GTTAAC | 1 cut(s) | 513 |
| Hpy166II | GTNNAC | 1 cut(s) | 513 |
| Hpy188I | TCNGA | 3 cut(s) | 381, 457, 466 |
| Hpy188III | TCNNGA | 2 cut(s) | 51, 290 |
| Hpy8I | GTNNAC | 1 cut(s) | 513 |
| HpyAV | CCTTC | 1 cut(s) | 339 |
| HpyCH4III | ACNGT | 1 cut(s) | 243 |
| HpyCH4V | TGCA | 2 cut(s) | 65, 335 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 167 |
| HpyF3I | CTNAG | 2 cut(s) | 39, 133 |
| Ksp22I | TGATCA | 1 cut(s) | 354 |
| KspAI | GTTAAC | 1 cut(s) | 513 |
| Kzo9I | GATC | 3 cut(s) | 354, 452, 481 |
| LmnI | GCTCC | 2 cut(s) | 43, 251 |
| LpnPI | CCDG | 3 cut(s) | 30, 110, 422 |
| MaeI | CTAG | 3 cut(s) | 72, 252, 485 |
| MaeIII | GTNAC | 1 cut(s) | 498 |
| MalI | GATC | 3 cut(s) | 356, 454, 483 |
| MboI | GATC | 3 cut(s) | 354, 452, 481 |
| MboII | GAAGA | 5 cut(s) | 275, 305, 308, 350, 423 |
| MflI | RGATCY | 1 cut(s) | 481 |
| MhlI | GDGCHC | 1 cut(s) | 248 |
| MluCI | AATT | 3 cut(s) | 189, 258, 320 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MnlI | CCTC | 4 cut(s) | 259, 276, 322, 439 |
| MseI | TTAA | 1 cut(s) | 512 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 167 |
| NdeII | GATC | 3 cut(s) | 354, 452, 481 |
| NmuCI | GTSAC | 1 cut(s) | 498 |
| PfeI | GAWTC | 3 cut(s) | 54, 286, 382 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| PspPI | GGNCC | 1 cut(s) | 150 |
| PsuI | RGATCY | 1 cut(s) | 481 |
| RsaI | GTAC | 1 cut(s) | 493 |
| RsaNI | GTAC | 1 cut(s) | 492 |
| SaqAI | TTAA | 1 cut(s) | 512 |
| Sau3AI | GATC | 3 cut(s) | 354, 452, 481 |
| Sau96I | GGNCC | 1 cut(s) | 150 |
| SchI | GAGTC | 1 cut(s) | 152 |
| SduI | GDGCHC | 1 cut(s) | 248 |
| SetI | ASST | 5 cut(s) | 48, 172, 238, 431, 490 |
| SinI | GGWCC | 1 cut(s) | 150 |
| SmlI | CTYRAG | 1 cut(s) | 398 |
| SmoI | CTYRAG | 1 cut(s) | 398 |
| SpeI | ACTAGT | 1 cut(s) | 71 |
| Sse9I | AATT | 3 cut(s) | 189, 258, 320 |
| SspMI | CTAG | 3 cut(s) | 72, 252, 485 |
| StyI | CCWWGG | 1 cut(s) | 153 |
| TaaI | ACNGT | 1 cut(s) | 243 |
| TaqI | TCGA | 2 cut(s) | 50, 57 |
| TasI | AATT | 3 cut(s) | 189, 258, 320 |
| TfiI | GAWTC | 3 cut(s) | 54, 286, 382 |
| Tru1I | TTAA | 1 cut(s) | 512 |
| Tru9I | TTAA | 1 cut(s) | 512 |
| TscAI | CASTG | 1 cut(s) | 507 |
| TseFI | GTSAC | 1 cut(s) | 498 |
| Tsp45I | GTSAC | 1 cut(s) | 498 |
| TspDTI | ATGAA | 3 cut(s) | 101, 188, 326 |
| TspRI | CASTG | 1 cut(s) | 507 |
| VpaK11BI | GGWCC | 1 cut(s) | 150 |
| XspI | CTAG | 3 cut(s) | 72, 252, 485 |