Rroxscaffold_2G00128060

Apoptotic chromatin condensation inducer in the nucleus

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0008982
Physical Location & Seq
Reverse (-)
63653382 .. 63658127
4746 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00128060.1

Sequence Viewer

Length: 2319 bp
ATGTCATCACCATATCCCAAACTTGACAATCGAACAATTGATCAGTGGAAGGTTACTGAGTTGAAAGAAGAGCTTAAGAGGCGGAAATTGACAACCAAGGGTTTGAAGGATGATTTGATCAAACGTTTGGATGAGGCAATTCGAATTGAAAGGGAAAATGCTGTGAGGCTTGAAAGGGAAAATGCTGAGAGGCTCGAAAGGGAGAATGCCGAGAGGCTCGAAAGGGAAAATGCTGAGAGGCTAGAAAGGGAAAATGCTGAGAGGCTGGAAAGGGAAATTGCCGAGAACATTGTGAGGGAAAATGCCGAGAAGAATATAGAGGGTAATGCTGAGAAGGTGGATAATGGTTTTAATGCTGATCGGGAGCGACATGCAGTGGATGCTAAAACAACTACAGGCTTCATTGATGGGCAGGAAAAGGCTGAAAACGTTGTCATTGGTGGTAGTGCAGCAGCATTGAATCAAGGCAATATCGAAGAGGATTATGTTCTTGTGGATAAACATGATGCTGCTATTGTTGGGGAGGAGCTGATTGTTCAATCAACTACTGTTGAAACCACTGTTACTGTCACTGAGAATGTGGTAGAGTATTTAGATTTAGGTGGGCAAGGTTCACAGAACACTGAAGCAAAGAAGACGAATGAGAATTCAAAACCACAGCTAGAGAATGAGCATCCAAAGCCCCAGCTGGAGAATGAGGATCCAGAGCCCATGCGGGAGAGTCTGGTTTCAAAGCCCCAGTTGGAGAATGAGGATCCAAAGCCCCAGCTGGAGAATGAGGATCCAGAGCCCATGCGGGAGAGTCTGGATTCAAAGCCCCAGTTGGAGAATGTTGATCCAAAGCCCCAGCTGGAGACTGAGAGTTTAGATGCTACACCCAAGGATGCCGTGCTCGACCCTTCTGCCCCAAACTACCAGGTATCTGAGGTCAGCACTGTTTTAGGGTCTGAAGTAAACTATGATTATATTTCTACTGATACTGTGTCAATTAATGAAAAGATTGAACTAAAGGATAATATAATTGCTGATCATGTCAAATTAGAATTAGATGTTAAGCCGGAGATGGTGGACCCATCATCCAGTGCTGTTGTCCCAGTCAATGGTGATTCACATCCAATGGATGCTGAAGAGCCACCTGAGAGCAGGGCATCTGTTAGAGAGAAAGATGACAACTATGATACTAATGCAGACATTAGCAAGAAAAATGATAGTGTGGATGTGGGGTACTCAGAAAAATTAAATTTGGAGAGAAGTTCTGGAGATGATTCTATGGAAGAGGATGTGCTGGACAGTAAACAAATTGATTCAAAGTATAGTTCTGATTATGTGGGAGATAGGGTTGAGAAAACTGAAGAACCTATTGCATTGGAGGATAGTCATGTTGATGTTGTGGGAGATGATAATTCCTCTGATAAAATGGATACAAGTGTTGATAACAAGAATCATCCAGCTCTTCCTGCTGAGAAAAGAAAGCTTGATGATATCTGCATAAGTAATAAAATTGATTCACATAAGACTAGTATCTCTTCAAGAGGACTTGTGGATGCAATGCACTTGTGGTATTTGCTGACCGTTAATTTAGATAAAGCAGCAGTTGTGACCAATGAGCCTGCTGTAAAGAGGCGCAGGTGGAACTCTGAAAACTTGAAAGTTCCAGAGCCACAAAACTCTATTCAAACACCTACCACCACACCCAAAGATACTTCTCTGACCCCCATTCTGAAGCGTAACTTTTCGAGATCAAACTCTACAATTGGTGAGGATATTCCCAAGGAACGTGTTGTTCCTCCATCGCAGAAGCCACCAACTAATTCCTTAAAGATTGATCATTTTTTGCGGCCTTTCACCCTGAAAGCTGTGCAAGAACTTCTTGGGAAAACTGGGAAGTATTCATCTGTGGAAGAAGCCGTGGAGACACGGAATGCTGTGTATAACTTACAGTGGCCAACCAATGGAGGCCGCCTCTTAGTGGCGGACTTTGTTGATCCTCAGGAAGTACAAACCCGGGTTCAGAATCCTCAGACTCCTGCTACACCTGTGAGTGCTCCTGTTGCTCCTGCTTTCTCAGCCACTTCGCAGCATCAGCCTTCACCTCGTCTATCTAAGCAGCAACTACAGCAGCAGCTTCCACCACCCCCTTCTCTCCCCCTCCACCACCCCTGTCTACCCCTCCCCCAGCAAGAGAGCGGCTTCCTCTGCCTCCCCCACCTCCTCTTTCGGAGAAACTTGATCCTCCGATTGTCACTTTGGATGATCTCTTTCGAAAAACTAAAGCAACCCCTCGGATCTATTACCTACCTTTATCCCAAGAACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002262 GO:0002376 GO:0002520 GO:0002682 GO:0002684 GO:0002761 GO:0002763 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0005886 GO:0006323 GO:0006915 GO:0006921 GO:0006996 GO:0007275 GO:0008150 GO:0008219 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0010941 GO:0010942 GO:0012501 GO:0016020 GO:0016043 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0022411 GO:0030097 GO:0030099 GO:0030154 GO:0030218 GO:0030261 GO:0030262 GO:0030263 GO:0031323 GO:0031324 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033119 GO:0034101 GO:0042592 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045597 GO:0045637 GO:0045639 GO:0045655 GO:0045657 GO:0045934 GO:0048024 GO:0048025 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048731 GO:0048856 GO:0048869 GO:0048872 GO:0050684 GO:0050686 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061574 GO:0065007 GO:0065008 GO:0070013 GO:0071103 GO:0071840 GO:0071944 GO:0080090 GO:0097194 GO:1902105 GO:1902107 GO:1903311 GO:1903312 GO:1903706 GO:1903708 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03040 map03013 map03015 map03040
Pfam Domains
Protein Families
RSB_motif SAP

Protein Analysis

772

Amino Acids

86.71

Weight (kDa)

4.83

Isoelectric Point (pI)

49.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SAP PF02037 13 - 48 4.3e-10 SAP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1617
Acc36I ACCTGC 1 cut(s) 1617
AccB7I CCANNNNNTGG 2 cut(s) 1100, 1952
AccBSI CCGCTC 1 cut(s) 2187
AccI GTMKAC 1 cut(s) 2164
AciI CCGC 7 cut(s) 82, 715, 796, 1837, 1960, 1973, 2187
AclI AACGTT 2 cut(s) 124, 429
AcoI YGGCCR 1 cut(s) 1943
AcsI RAATTY 2 cut(s) 646, 1240
AcuI CTGAAG 5 cut(s) 645, 969, 1146, 1371, 1742
AfaI GTAC 2 cut(s) 1226, 1998
AfiI CCNNNNNNNGG 3 cut(s) 1100, 1952, 1969
AflII CTTAAG 1 cut(s) 74
AflIII ACRYGT 1 cut(s) 1777
AhlI ACTAGT 1 cut(s) 1517
AjnI CCWGG 1 cut(s) 915
Alw21I GWGCWC 2 cut(s) 894, 2047
Alw26I GTCTC 2 cut(s) 848, 1907
Ama87I CYCGRG 1 cut(s) 2004
AoxI GGCC 3 cut(s) 1838, 1943, 1957
ApeKI GCWGC 8 cut(s) 449, 452, 509, 1589, 2077, 2107, 2119, 2122
ApoI RAATTY 2 cut(s) 646, 1240
AseI ATTAAT 1 cut(s) 990
AspLEI GCGC 1 cut(s) 1626
AspS9I GGNCC 1 cut(s) 1069
AsuC2I CCSGG 2 cut(s) 2005, 2006
AsuHPI GGTGA 4 cut(s) 1115, 1769, 1837, 2082
AsuII TTCGAA 2 cut(s) 142, 2262
AvaI CYCGRG 1 cut(s) 2004
AvaII GGWCC 1 cut(s) 1069
AxyI CCTNAGG 1 cut(s) 1989
BaeI ACNNNNGTAYC 2 cut(s) 1413, 1446
BalI TGGCCA 1 cut(s) 1945
BamHI GGATCC 3 cut(s) 700, 754, 781
BanII GRGCYC 2 cut(s) 711, 792
BbsI GAAGAC 1 cut(s) 641
Bbv12I GWGCWC 2 cut(s) 894, 2047
BbvI GCAGC 8 cut(s) 461, 464, 496, 1601, 2089, 2119, 2131, 2134
BccI CCATC 4 cut(s) 401, 1057, 1081, 1798
BceAI ACGGC 2 cut(s) 872, 1892
BcgI CGANNNNNNTGC 2 cut(s) 884, 918
BciT130I CCWGG 1 cut(s) 917
BciVI GTATCC 1 cut(s) 1414
BclI TGATCA 4 cut(s) 40, 117, 1027, 1825
BcnI CCSGG 2 cut(s) 2005, 2006
BcoDI GTCTC 2 cut(s) 848, 1907
BcuI ACTAGT 1 cut(s) 1517
BfaI CTAG 3 cut(s) 242, 662, 1518
BfmI CTRYAG 2 cut(s) 393, 2114
BfrI CTTAAG 1 cut(s) 74
BfuAI ACCTGC 1 cut(s) 1617
BfuI GTATCC 1 cut(s) 1414
Bme1390I CCNGG 3 cut(s) 917, 2005, 2006
Bme18I GGWCC 1 cut(s) 1069
BmeT110I CYCGRG 1 cut(s) 2004
BmgT120I GGNCC 1 cut(s) 1069
BmiI GGNNCC 4 cut(s) 702, 756, 783, 1071
BmrFI CCNGG 3 cut(s) 917, 2005, 2006
BmrI ACTGGG 4 cut(s) 733, 814, 1088, 1890
BmsI GCATC 9 cut(s) 370, 496, 682, 859, 874, 1111, 1157, 1534, 2089
BmuI ACTGGG 4 cut(s) 733, 814, 1088, 1890
BpiI GAAGAC 1 cut(s) 641
BplI GAGNNNNNCTC 2 cut(s) 1947, 1979
BpmI CTGGAG 4 cut(s) 710, 791, 872, 1278
Bpu14I TTCGAA 2 cut(s) 142, 2262
BpuMI CCSGG 2 cut(s) 2005, 2006
BsaBI GATNNNNATC 1 cut(s) 1110
BsaJI CCNNGG 6 cut(s) 96, 879, 1770, 1908, 2004, 2281
BsaXI ACNNNNNCTCC 2 cut(s) 1323, 1353
Bsc4I CCNNNNNNNGG 3 cut(s) 1100, 1952, 1969
Bse1I ACTGG 5 cut(s) 739, 820, 1080, 1094, 1885
Bse21I CCTNAGG 1 cut(s) 1989
Bse3DI GCAATG 1 cut(s) 1554
Bse8I GATNNNNATC 1 cut(s) 1110
BseBI CCWGG 1 cut(s) 917
BseDI CCNNGG 6 cut(s) 96, 879, 1770, 1908, 2004, 2281
BseJI GATNNNNATC 1 cut(s) 1110
BseLI CCNNNNNNNGG 3 cut(s) 1100, 1952, 1969
BseMI GCAATG 1 cut(s) 1554
BseNI ACTGG 5 cut(s) 739, 820, 1080, 1094, 1885
BseRI GAGGAG 2 cut(s) 539, 2201
BseXI GCAGC 8 cut(s) 461, 464, 496, 1601, 2089, 2119, 2131, 2134
BseYI CCCAGC 4 cut(s) 684, 765, 846, 2175
BsgI GTGCAG 1 cut(s) 468
BshFI GGCC 3 cut(s) 1840, 1945, 1959
BsiHKAI GWGCWC 2 cut(s) 894, 2047
BsiHKCI CYCGRG 1 cut(s) 2004
BsiSI CCGG 2 cut(s) 1058, 2005
BslFI GGGAC 1 cut(s) 1076
BslI CCNNNNNNNGG 3 cut(s) 1100, 1952, 1969
BsmAI GTCTC 2 cut(s) 848, 1907
BsmFI GGGAC 1 cut(s) 1076
BsmI GAATGC 2 cut(s) 211, 1927
BsnI GGCC 3 cut(s) 1840, 1945, 1959
BsoBI CYCGRG 1 cut(s) 2004
Bsp119I TTCGAA 2 cut(s) 142, 2262
Bsp1286I GDGCHC 4 cut(s) 711, 792, 894, 2047
BspACI CCGC 7 cut(s) 82, 715, 796, 1837, 1960, 1973, 2187
BspANI GGCC 3 cut(s) 1840, 1945, 1959
BspLI GGNNCC 4 cut(s) 702, 756, 783, 1071
BspMI ACCTGC 1 cut(s) 1617
BspQI GCTCTTC 3 cut(s) 63, 1122, 1458
BspT104I TTCGAA 2 cut(s) 142, 2262
BspTI CTTAAG 1 cut(s) 74
BsrBI CCGCTC 1 cut(s) 2187
BsrDI GCAATG 1 cut(s) 1554
BsrI ACTGG 5 cut(s) 739, 820, 1080, 1094, 1885
BssECI CCNNGG 6 cut(s) 96, 879, 1770, 1908, 2004, 2281
BssT1I CCWWGG 3 cut(s) 96, 879, 1770
Bst2UI CCWGG 1 cut(s) 917
Bst4CI ACNGT 8 cut(s) 550, 562, 568, 937, 982, 1292, 1573, 1941
Bst6I CTCTTC 6 cut(s) 63, 471, 1122, 1269, 1458, 1531
BstAFI CTTAAG 1 cut(s) 74
BstAPI GCANNNNNTGC 1 cut(s) 380
BstBI TTCGAA 2 cut(s) 142, 2262
BstC8I GCNNGC 1 cut(s) 1611
BstDSI CCRYGG 1 cut(s) 1908
BstHHI GCGC 1 cut(s) 1626
BstMAI GTCTC 2 cut(s) 848, 1907
BstMWI GCNNNNNNNGC 9 cut(s) 79, 380, 679, 1457, 2051, 2066, 2083, 2116, 2196
BstNI CCWGG 1 cut(s) 917
BstNSI RCATGY 1 cut(s) 374
BstSCI CCNGG 3 cut(s) 915, 2003, 2004
BstSFI CTRYAG 2 cut(s) 393, 2114
BstV1I GCAGC 8 cut(s) 461, 464, 496, 1601, 2089, 2119, 2131, 2134
BstV2I GAAGAC 1 cut(s) 641
BstX2I RGATCY 4 cut(s) 700, 754, 781, 2285
BstYI RGATCY 4 cut(s) 700, 754, 781, 2285
Bsu36I CCTNAGG 1 cut(s) 1989
BsuI GTATCC 1 cut(s) 1414
BsuRI GGCC 3 cut(s) 1840, 1945, 1959
BtgI CCRYGG 1 cut(s) 1908
BtgZI GCGATG 1 cut(s) 1776
BtsI GCAGTG 1 cut(s) 381
BtsIMutI CAGTG 8 cut(s) 50, 381, 558, 570, 621, 933, 1087, 1946
BveI ACCTGC 1 cut(s) 1617
Cac8I GCNNGC 1 cut(s) 1611
CfoI GCGC 1 cut(s) 1626
Cfr13I GGNCC 1 cut(s) 1069
Cfr9I CCCGGG 1 cut(s) 2004
CsiI ACCWGGT 1 cut(s) 915
Csp6I GTAC 2 cut(s) 1225, 1997
CviAII CATG 6 cut(s) 371, 503, 712, 793, 1031, 1379
CviQI GTAC 2 cut(s) 1225, 1997
EaeI YGGCCR 1 cut(s) 1943
Eam1104I CTCTTC 6 cut(s) 63, 471, 1122, 1269, 1458, 1531
EarI CTCTTC 6 cut(s) 63, 471, 1122, 1269, 1458, 1531
EciI GGCGGA 2 cut(s) 97, 1988
Eco130I CCWWGG 3 cut(s) 96, 879, 1770
Eco24I GRGCYC 2 cut(s) 711, 792
Eco32I GATATC 1 cut(s) 1483
Eco47I GGWCC 1 cut(s) 1069
Eco57I CTGAAG 5 cut(s) 645, 969, 1146, 1371, 1742
Eco81I CCTNAGG 1 cut(s) 1989
Eco88I CYCGRG 1 cut(s) 2004
EcoRI GAATTC 1 cut(s) 646
EcoRII CCWGG 1 cut(s) 915
EcoRV GATATC 1 cut(s) 1483
EcoT14I CCWWGG 3 cut(s) 96, 879, 1770
EcoT38I GRGCYC 2 cut(s) 711, 792
ErhI CCWWGG 3 cut(s) 96, 879, 1770
FaeI CATG 6 cut(s) 374, 506, 715, 796, 1034, 1382
FalI AAGNNNNNCTT 6 cut(s) 57, 89, 1715, 1747, 1854, 1886
FaqI GGGAC 1 cut(s) 1076
FatI CATG 6 cut(s) 370, 502, 711, 792, 1030, 1378
FauI CCCGC 2 cut(s) 708, 789
FbaI TGATCA 4 cut(s) 40, 117, 1027, 1825
FblI GTMKAC 1 cut(s) 2164
FriOI GRGCYC 2 cut(s) 711, 792
FspBI CTAG 3 cut(s) 242, 662, 1518
GlaI GCGC 1 cut(s) 1625
GsaI CCCAGC 4 cut(s) 688, 769, 850, 2179
GsuI CTGGAG 4 cut(s) 710, 791, 872, 1278
HaeIII GGCC 3 cut(s) 1840, 1945, 1959
HapII CCGG 2 cut(s) 1058, 2005
HhaI GCGC 1 cut(s) 1626
Hin1II CATG 6 cut(s) 374, 506, 715, 796, 1034, 1382
Hin6I GCGC 1 cut(s) 1624
HinP1I GCGC 1 cut(s) 1624
HindIII AAGCTT 1 cut(s) 1472
HpaII CCGG 2 cut(s) 1058, 2005
HphI GGTGA 4 cut(s) 1115, 1769, 1837, 2082
Hpy166II GTNNAC 5 cut(s) 614, 955, 1069, 1295, 2165
Hpy188III TCNNGA 9 cut(s) 362, 704, 785, 806, 1257, 1530, 1655, 1737, 1991
Hpy8I GTNNAC 5 cut(s) 614, 955, 1069, 1295, 2165
HpyAV CCTTC 6 cut(s) 43, 100, 328, 909, 2097, 2148
HpyCH4III ACNGT 8 cut(s) 550, 562, 568, 937, 982, 1292, 1573, 1941
HpyCH4IV ACGT 3 cut(s) 124, 429, 1777
HpyCH4V TGCA 8 cut(s) 374, 449, 1187, 1364, 1488, 1547, 1552, 1861
HpyF10VI GCNNNNNNNGC 9 cut(s) 79, 380, 679, 1457, 2051, 2066, 2083, 2116, 2196
HpySE526I ACGT 3 cut(s) 124, 429, 1777
Hsp92II CATG 6 cut(s) 374, 506, 715, 796, 1034, 1382
HspAI GCGC 1 cut(s) 1624
Ksp22I TGATCA 4 cut(s) 40, 117, 1027, 1825
LguI GCTCTTC 3 cut(s) 63, 1122, 1458
LmnI GCTCC 4 cut(s) 364, 526, 2050, 2059
Lsp1109I GCAGC 8 cut(s) 461, 464, 496, 1601, 2089, 2119, 2131, 2134
LweI GCATC 9 cut(s) 370, 496, 682, 859, 874, 1111, 1157, 1534, 2089
MabI ACCWGGT 1 cut(s) 915
MaeI CTAG 3 cut(s) 242, 662, 1518
MaeII ACGT 3 cut(s) 124, 429, 1777
MaeIII GTNAC 6 cut(s) 52, 562, 568, 1597, 1727, 2241
MbiI CCGCTC 1 cut(s) 2187
MfeI CAATTG 2 cut(s) 36, 1752
MflI RGATCY 4 cut(s) 700, 754, 781, 2285
MhlI GDGCHC 4 cut(s) 711, 792, 894, 2047
MlsI TGGCCA 1 cut(s) 1945
MluNI TGGCCA 1 cut(s) 1945
MlyI GAGTC 3 cut(s) 730, 811, 2017
MmeI TCCRAC 2 cut(s) 723, 804
Mox20I TGGCCA 1 cut(s) 1945
MscI TGGCCA 1 cut(s) 1945
MseI TTAA 7 cut(s) 75, 351, 990, 1053, 1238, 1575, 1817
MslI CAYNNNNRTG 1 cut(s) 1383
Msp20I TGGCCA 1 cut(s) 1945
MspA1I CMGCKG 3 cut(s) 688, 769, 850
MspCI CTTAAG 1 cut(s) 74
MspI CCGG 2 cut(s) 1058, 2005
MspR9I CCNGG 3 cut(s) 917, 2005, 2006
MunI CAATTG 2 cut(s) 36, 1752
Mva1269I GAATGC 2 cut(s) 211, 1927
MvaI CCWGG 1 cut(s) 917
MwoI GCNNNNNNNGC 9 cut(s) 79, 380, 679, 1457, 2051, 2066, 2083, 2116, 2196
NciI CCSGG 2 cut(s) 2005, 2006
NlaIII CATG 6 cut(s) 374, 506, 715, 796, 1034, 1382
NlaIV GGNNCC 4 cut(s) 702, 756, 783, 1071
NmeAIII GCCGAG 3 cut(s) 235, 307, 331
NmuCI GTSAC 3 cut(s) 568, 1597, 2241
NspI RCATGY 1 cut(s) 374
NspV TTCGAA 2 cut(s) 142, 2262
PaqCI CACCTGC 1 cut(s) 1617
PciSI GCTCTTC 3 cut(s) 63, 1122, 1458
PctI GAATGC 2 cut(s) 211, 1927
PfeI GAWTC 8 cut(s) 460, 809, 1106, 1265, 1304, 1441, 1505, 2014
PflMI CCANNNNNTGG 2 cut(s) 1100, 1952
PleI GAGTC 3 cut(s) 729, 810, 2017
PpsI GAGTC 3 cut(s) 729, 810, 2017
PshBI ATTAAT 1 cut(s) 990
Psp1406I AACGTT 2 cut(s) 124, 429
Psp6I CCWGG 1 cut(s) 915
PspFI CCCAGC 4 cut(s) 684, 765, 846, 2175
PspGI CCWGG 1 cut(s) 915
PspN4I GGNNCC 4 cut(s) 702, 756, 783, 1071
PspPI GGNCC 1 cut(s) 1069
PsuI RGATCY 4 cut(s) 700, 754, 781, 2285
PvuII CAGCTG 3 cut(s) 688, 769, 850
RsaI GTAC 2 cut(s) 1226, 1998
RsaNI GTAC 2 cut(s) 1225, 1997
RseI CAYNNNNRTG 1 cut(s) 1383
SapI GCTCTTC 3 cut(s) 63, 1122, 1458
SaqAI TTAA 7 cut(s) 75, 351, 990, 1053, 1238, 1575, 1817
Sau96I GGNCC 1 cut(s) 1069
SchI GAGTC 3 cut(s) 730, 811, 2017
ScrFI CCNGG 3 cut(s) 917, 2005, 2006
SduI GDGCHC 4 cut(s) 711, 792, 894, 2047
SexAI ACCWGGT 1 cut(s) 915
SfaNI GCATC 9 cut(s) 370, 496, 682, 859, 874, 1111, 1157, 1534, 2089
SfcI CTRYAG 2 cut(s) 393, 2114
SfuI TTCGAA 2 cut(s) 142, 2262
SinI GGWCC 1 cut(s) 1069
SmaI CCCGGG 1 cut(s) 2006
SmiMI CAYNNNNRTG 1 cut(s) 1383
SmlI CTYRAG 1 cut(s) 74
SmoI CTYRAG 1 cut(s) 74
SpeI ACTAGT 1 cut(s) 1517
SsiI CCGC 7 cut(s) 82, 715, 796, 1837, 1960, 1973, 2187
SspMI CTAG 3 cut(s) 242, 662, 1518
StyD4I CCNGG 3 cut(s) 915, 2003, 2004
StyI CCWWGG 3 cut(s) 96, 879, 1770
TaaI ACNGT 8 cut(s) 550, 562, 568, 937, 982, 1292, 1573, 1941
TaiI ACGT 3 cut(s) 127, 432, 1780
TaqI TCGA 8 cut(s) 31, 142, 195, 219, 474, 894, 1736, 2262
TatI WGTACW 1 cut(s) 1996
TauI GCSGC 3 cut(s) 1840, 1962, 2190
TfiI GAWTC 8 cut(s) 460, 809, 1106, 1265, 1304, 1441, 1505, 2014
Tru1I TTAA 7 cut(s) 75, 351, 990, 1053, 1238, 1575, 1817
Tru9I TTAA 7 cut(s) 75, 351, 990, 1053, 1238, 1575, 1817
TscAI CASTG 8 cut(s) 50, 381, 565, 577, 628, 940, 1087, 1946
TseFI GTSAC 3 cut(s) 568, 1597, 2241
TseI GCWGC 8 cut(s) 449, 452, 509, 1589, 2077, 2107, 2119, 2122
Tsp45I GTSAC 3 cut(s) 568, 1597, 2241
TspDTI ATGAA 3 cut(s) 391, 1008, 1881
TspGWI ACGGA 1 cut(s) 1933
TspMI CCCGGG 1 cut(s) 2004
TspRI CASTG 8 cut(s) 50, 381, 565, 577, 628, 940, 1087, 1946
Van91I CCANNNNNTGG 2 cut(s) 1100, 1952
Vha464I CTTAAG 1 cut(s) 74
VpaK11BI GGWCC 1 cut(s) 1069
VspI ATTAAT 1 cut(s) 990
XapI RAATTY 2 cut(s) 646, 1240
XceI RCATGY 1 cut(s) 374
XmaI CCCGGG 1 cut(s) 2004
XmiI GTMKAC 1 cut(s) 2164
XspI CTAG 3 cut(s) 242, 662, 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.