Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0014425

Physical Location & Seq

Genomic Coordinates Reverse (-)

79014164 .. 79015846

Gene Structure 1683 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00140730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGAGAGTACCCGTTACCACACCCCAAACCAACAACAACAACAACAACAACAACAGCAACCAATCTCCAAACCCTAAACCCGAAACCAATCTCGGATTCCACACTCCTTCGCGCATCAATCCAAACCTCTGCTACGAGCCAACCTCCGTTCTCGACCTCCGCCACAGCCCCAGCCCCGTGGCAGCCGGTAAGCAGTCAAAAGTTTCAGCTATCTCCGACGTCCTGACTCACCCGAATCACCATGAGCCTCTCGAGTGGGTCGACGAGCAGGATCTTCAACACTTGGACTGGGACTCCCTCATGAGAGACTTGGGCTTGCACGACGACTCTGTCCTTAACCTGAGACCTACTACTAATACACAGCTGAACCCCCACCCCAACAGCGAGCCTCAGATTCCTCATCTCCCGGAGTACCCTCATCCACAGCCGTTCGATCCCACCCAGCTGGTCCACTCCGACTTCAACCTCTCCGGGGTCTACTCCTCCCAGAATTTCAGCCACCACAATCTGCCTTCATATGATCAGACCGATATTCATTCCTCGGTGAACTCCAACGTGGGGTTCGATTTCATCGAGGAGCTGATCCGAGCCGCGGACTGTTTCGACTCTGACGAGCTCAACCTGGCTCAGGTGATCCTTGACCGGCTCAACCAACGTCAGCGATTGTCCTCGCCAAACCCAAAAACTCTTGGAAAACCTCTCCAGCGAGCCGCGGTTTATTTCAAAGACGCTCTCCAGTCCCTCCTCAACAACTCCACCGGTTCAAGTCCGGTTCGCAACCTCTCCTCCTGGTCTGAAATTGTCCAGACCATCAGAGCCTACAAGGGCTTTTCGGGAATTTCGCCTATCCCGATGTTCTCGCACTTCACAACTAACCAGGCGCTCCTCGAAGCGCTCAACGGCTCCGGCTTCGTCCACGTCATTGACTTCGACATCGGCCTCGGCGGCCAGTACGCTTCGCTGATGAAAGAGCTCGCCGAGAAAGCTGACGTATCGAGGTCCAACCCGCCGGTGCTGCGCATCACCGCCGTCGTGCCGGAGGAGTACGCCGTCGAGAGCAGGCTGGTGAGAGAGAACTTGTCCCAGTTCGCTCAGGAACTCAAGATCAGATTCCAAATCGAATTCCTTCTCGTCCGAACCTTCGAGATTCTCTCCTTCAAGGCGATCAAGTTCATGGAAGGAGAGAAAACGGCGATTCTGCTGTCGCCGTACATCATGCGCCGCCTCAGCTCCTCCGAGAACGTCCGCGCGTTTCTAGGCGACATCCGGCTAGTGTCGCCGACGGTGGTGGTGTTCGTCGACGGCGAGGGGCTGGCCGAGACGGGAGCGACGTCGTTCAGGAGGAACTTCGTGTCGGGGCTGGAGTTCTTCTCAATTGTTTTGGAGTCGCTGGACGCGGCGGTGCCGGGTGGCGAGATGGTGAGGAAGATCGAGACGTTCCTGTTGAGGCCGAAGATCGAGGCGGCGGTGGAGGCAGCGGGGAGGCGGGTCCCGCCGTGGCGGGAAGTGTTTCACGGCGCGGGAATGAGGGCCGTGGAGCTGAGCCAGTTTGCGGACTTTCAGGCCCAGTGCTTGTTGGGCAAGGTCCAGGTCAGGGGGTTCCACGTGGCGAAGCGGCAGGCGGAGCTGGTGCTGTGCTGGCATGATAGGGCCCTGGTGGCCACGTCGGCATGGAGGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048831 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

560

Amino Acids

62.61

Weight (kDa)

5.96

Isoelectric Point (pI)

44.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	192 - 559	7.3e-96	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36710
fragaria_vesca	FvH4_1g13740
malus_domestica	MD02G1152200.v1.1 MD15G1266500.v1.1
prunus_persica	Prupe.7G150900_v2.0.a1
pyrus_communis	pycom02g11950
rosa_chinensis	RchiOBHm_Chr2g0102171
rosa_laevigata	RLG00000017134
rosa_multiflora	Rmu_co8491613.1_g000001 Rmu_sc0000157.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140730
rosa_rugosa	Rorug02G0104800
rosa_samantha	Rh2AG153200 Rh2BG159100 Rh2CG158600 Rh2DG158800
rosa_wichuraiana	Rw2G011960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	329
AatII	GACGTC	2 cut(s)	222, 1334
Acc16I	TGCGCA	1 cut(s)	1019
AccB1I	GGYRCC	1 cut(s)	1402
AccI	GTMKAC	3 cut(s)	261, 477, 1299
AccII	CGCG	7 cut(s)	112, 593, 713, 1248, 1250, 1397, 1520
AclWI	GGATC	4 cut(s)	279, 428, 577, 628
AcoI	YGGCCR	3 cut(s)	946, 1314, 1659
AcsI	RAATTY	3 cut(s)	490, 837, 1121
AcvI	CACGTG	1 cut(s)	1606
AcyI	GRCGYC	2 cut(s)	219, 1331
AfaI	GTAC	5 cut(s)	9, 413, 953, 1046, 1211
AfeI	AGCGCT	1 cut(s)	894
AfiI	CCNNNNNNNGG	6 cut(s)	472, 558, 592, 628, 1552, 1594
AgeI	ACCGGT	1 cut(s)	758
AgsI	TTSAA	5 cut(s)	278, 463, 724, 765, 1159
AjiI	CACGTC	2 cut(s)	919, 1665
AjnI	CCWGG	5 cut(s)	621, 788, 876, 1587, 1653
AjuI	GAANNNNNNNTTGG	4 cut(s)	80, 112, 545, 577
Alw21I	GWGCWC	2 cut(s)	618, 975
Alw26I	GTCTC	4 cut(s)	300, 337, 1313, 1427
AlwI	GGATC	4 cut(s)	279, 428, 577, 628
Ama87I	CYCGRG	1 cut(s)	251
Aor51HI	AGCGCT	1 cut(s)	894
AoxI	GGCC	8 cut(s)	937, 946, 1314, 1448, 1530, 1563, 1650, 1659
ApaI	GGGCCC	1 cut(s)	1654
ApeKI	GCWGC	3 cut(s)	182, 1015, 1475
ApoI	RAATTY	3 cut(s)	490, 837, 1121
AsiGI	ACCGGT	1 cut(s)	758
Asp700I	GAANNNNTTC	2 cut(s)	1125, 1509
AspLEI	GCGC	7 cut(s)	114, 883, 895, 1020, 1221, 1250, 1520
AspS9I	GGNCC	8 cut(s)	448, 999, 1489, 1530, 1564, 1585, 1650, 1651
AsuC2I	CCSGG	3 cut(s)	407, 472, 1407
AsuHPI	GGTGA	7 cut(s)	221, 230, 556, 643, 1015, 1078, 1432
AvaI	CYCGRG	1 cut(s)	251
AvaII	GGWCC	4 cut(s)	448, 999, 1489, 1585
BaeGI	GKGCMC	1 cut(s)	1654
BalI	TGGCCA	1 cut(s)	1661
BanI	GGYRCC	1 cut(s)	1402
BanII	GRGCYC	3 cut(s)	618, 975, 1654
BbrPI	CACGTG	1 cut(s)	1606
Bbv12I	GWGCWC	2 cut(s)	618, 975
BbvCI	CCTCAGC	1 cut(s)	1226
BbvI	GCAGC	3 cut(s)	194, 1002, 1487
BccI	CCATC	2 cut(s)	818, 1411
BciT130I	CCWGG	5 cut(s)	623, 790, 878, 1589, 1655
BclI	TGATCA	1 cut(s)	520
BcnI	CCSGG	3 cut(s)	407, 472, 1407
BcoDI	GTCTC	4 cut(s)	300, 337, 1313, 1427
BfaI	CTAG	2 cut(s)	1256, 1271
BfoI	RGCGCY	2 cut(s)	884, 896
BglI	GCCNNNNNGGC	3 cut(s)	945, 1658, 1667
BlpI	GCTNAGC	1 cut(s)	1541
Bme1390I	CCNGG	8 cut(s)	407, 472, 623, 790, 878, 1407, 1589, 1655
Bme18I	GGWCC	4 cut(s)	448, 999, 1489, 1585
BmeT110I	CYCGRG	1 cut(s)	251
BmgBI	CACGTC	2 cut(s)	919, 1665
BmgT120I	GGNCC	8 cut(s)	448, 999, 1489, 1530, 1564, 1585, 1650, 1651
BmiI	GGNNCC	6 cut(s)	904, 1404, 1490, 1491, 1601, 1652
BmrFI	CCNGG	8 cut(s)	407, 472, 623, 790, 878, 1407, 1589, 1655
BmrI	ACTGGG	3 cut(s)	298, 1078, 1561
BmsI	GCATC	2 cut(s)	123, 1029
BmuI	ACTGGG	3 cut(s)	298, 1078, 1561
BplI	GAGNNNNNCTC	6 cut(s)	128, 160, 1136, 1168, 1355, 1387
BpmI	CTGGAG	3 cut(s)	686, 719, 1382
Bpu10I	CCTNAGC	3 cut(s)	627, 1092, 1226
Bpu1102I	GCTNAGC	1 cut(s)	1541
BpuEI	CTTGAG	1 cut(s)	1085
BpuMI	CCSGG	3 cut(s)	407, 472, 1407
BsaAI	YACGTR	1 cut(s)	1606
BsaHI	GRCGYC	2 cut(s)	219, 1331
BsaI	GGTCTC	1 cut(s)	337
BsaJI	CCNNGG	9 cut(s)	177, 471, 540, 591, 711, 940, 1496, 1533, 1653
BsaWI	WCCGGW	2 cut(s)	758, 769
BsaXI	ACNNNNNCTCC	4 cut(s)	278, 308, 770, 800
Bsc4I	CCNNNNNNNGG	6 cut(s)	472, 558, 592, 628, 1552, 1594
Bse118I	RCCGGY	4 cut(s)	185, 642, 758, 1009
Bse1I	ACTGG	6 cut(s)	293, 736, 949, 1084, 1546, 1567
BseBI	CCWGG	5 cut(s)	623, 790, 878, 1589, 1655
BseDI	CCNNGG	9 cut(s)	177, 471, 540, 591, 711, 940, 1496, 1533, 1653
BseGI	GGATG	2 cut(s)	418, 1263
BseLI	CCNNNNNNNGG	6 cut(s)	472, 558, 592, 628, 1552, 1594
BseMII	CTCAG	6 cut(s)	332, 404, 641, 1106, 1240, 1532
BseNI	ACTGG	6 cut(s)	293, 736, 949, 1084, 1546, 1567
BseRI	GAGGAG	7 cut(s)	472, 590, 734, 775, 875, 1055, 1222
BseSI	GKGCMC	1 cut(s)	1654
BseXI	GCAGC	3 cut(s)	194, 1002, 1487
BseYI	CCCAGC	2 cut(s)	170, 441
Bsh1236I	CGCG	7 cut(s)	112, 593, 713, 1248, 1250, 1397, 1520
BshFI	GGCC	8 cut(s)	939, 948, 1316, 1450, 1532, 1565, 1652, 1661
BshNI	GGYRCC	1 cut(s)	1402
BshTI	ACCGGT	1 cut(s)	758
BsiHKAI	GWGCWC	2 cut(s)	618, 975
BsiHKCI	CYCGRG	1 cut(s)	251
BslFI	GGGAC	4 cut(s)	305, 724, 1066, 1475
BslI	CCNNNNNNNGG	6 cut(s)	472, 558, 592, 628, 1552, 1594
BsmAI	GTCTC	4 cut(s)	300, 337, 1313, 1427
BsmBI	CGTCTC	2 cut(s)	1313, 1427
BsmFI	GGGAC	4 cut(s)	305, 724, 1066, 1475
BsnI	GGCC	8 cut(s)	939, 948, 1316, 1450, 1532, 1565, 1652, 1661
Bso31I	GGTCTC	1 cut(s)	337
BsoBI	CYCGRG	1 cut(s)	251
Bsp120I	GGGCCC	1 cut(s)	1650
Bsp1286I	GDGCHC	3 cut(s)	618, 975, 1654
Bsp143I	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
Bsp1720I	GCTNAGC	1 cut(s)	1541
BspANI	GGCC	8 cut(s)	939, 948, 1316, 1450, 1532, 1565, 1652, 1661
BspCNI	CTCAG	6 cut(s)	333, 403, 640, 1105, 1239, 1533
BspFNI	CGCG	7 cut(s)	112, 593, 713, 1248, 1250, 1397, 1520
BspHI	TCATGA	1 cut(s)	300
BspLI	GGNNCC	6 cut(s)	904, 1404, 1490, 1491, 1601, 1652
BspPI	GGATC	4 cut(s)	279, 428, 577, 628
BspT107I	GGYRCC	1 cut(s)	1402
BspTNI	GGTCTC	1 cut(s)	337
BsrFI	RCCGGY	4 cut(s)	185, 642, 758, 1009
BsrI	ACTGG	6 cut(s)	293, 736, 949, 1084, 1546, 1567
BssAI	RCCGGY	4 cut(s)	185, 642, 758, 1009
BssECI	CCNNGG	9 cut(s)	177, 471, 540, 591, 711, 940, 1496, 1533, 1653
BssMI	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
BssNI	GRCGYC	2 cut(s)	219, 1331
Bst2UI	CCWGG	5 cut(s)	623, 790, 878, 1589, 1655
Bst4CI	ACNGT	2 cut(s)	599, 1285
BstACI	GRCGYC	2 cut(s)	219, 1331
BstBAI	YACGTR	1 cut(s)	1606
BstC8I	GCNNGC	8 cut(s)	317, 386, 708, 975, 1061, 1314, 1620, 1640
BstDEI	CTNAG	6 cut(s)	341, 390, 627, 1092, 1226, 1541
BstDSI	CCRYGG	5 cut(s)	177, 591, 711, 1496, 1533
BstENI	CCTNNNNNAGG	1 cut(s)	626
BstF5I	GGATG	2 cut(s)	418, 1263
BstFNI	CGCG	7 cut(s)	112, 593, 713, 1248, 1250, 1397, 1520
BstH2I	RGCGCY	2 cut(s)	884, 896
BstHHI	GCGC	7 cut(s)	114, 883, 895, 1020, 1221, 1250, 1520
BstKTI	GATC	9 cut(s)	274, 436, 523, 585, 636, 1107, 1167, 1431, 1458
BstMAI	GTCTC	4 cut(s)	300, 337, 1313, 1427
BstMBI	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
BstNI	CCWGG	5 cut(s)	623, 790, 878, 1589, 1655
BstSCI	CCNGG	8 cut(s)	405, 470, 621, 788, 876, 1405, 1587, 1653
BstSLI	GKGCMC	1 cut(s)	1654
BstUI	CGCG	7 cut(s)	112, 593, 713, 1248, 1250, 1397, 1520
BstV1I	GCAGC	3 cut(s)	194, 1002, 1487
BstX2I	RGATCY	1 cut(s)	271
BstXI	CCANNNNNNTGG	2 cut(s)	178, 445
BstYI	RGATCY	1 cut(s)	271
BsuRI	GGCC	8 cut(s)	939, 948, 1316, 1450, 1532, 1565, 1652, 1661
BtgI	CCRYGG	5 cut(s)	177, 591, 711, 1496, 1533
BtrI	CACGTC	2 cut(s)	919, 1665
BtsCI	GGATG	2 cut(s)	418, 1263
BtsIMutI	CAGTG	1 cut(s)	1574
Cac8I	GCNNGC	8 cut(s)	317, 386, 708, 975, 1061, 1314, 1620, 1640
CciI	TCATGA	1 cut(s)	300
CfoI	GCGC	7 cut(s)	114, 883, 895, 1020, 1221, 1250, 1520
Cfr10I	RCCGGY	4 cut(s)	185, 642, 758, 1009
Cfr13I	GGNCC	8 cut(s)	448, 999, 1489, 1530, 1564, 1585, 1650, 1651
Cfr42I	CCGCGG	2 cut(s)	594, 714
CseI	GACGC	2 cut(s)	737, 1403
Csp6I	GTAC	5 cut(s)	8, 412, 952, 1045, 1210
CspAI	ACCGGT	1 cut(s)	758
CviAII	CATG	6 cut(s)	242, 301, 1174, 1216, 1643, 1671
CviQI	GTAC	5 cut(s)	8, 412, 952, 1045, 1210
DdeI	CTNAG	6 cut(s)	341, 390, 627, 1092, 1226, 1541
DpnI	GATC	9 cut(s)	273, 435, 522, 584, 635, 1106, 1166, 1430, 1457
DpnII	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
DrdI	GACNNNNNNGTC	1 cut(s)	329
DseDI	GACNNNNNNGTC	1 cut(s)	329
EaeI	YGGCCR	3 cut(s)	946, 1314, 1659
EciI	GGCGGA	2 cut(s)	149, 1637
Ecl136II	GAGCTC	2 cut(s)	616, 973
Eco24I	GRGCYC	3 cut(s)	618, 975, 1654
Eco31I	GGTCTC	1 cut(s)	337
Eco47I	GGWCC	4 cut(s)	448, 999, 1489, 1585
Eco47III	AGCGCT	1 cut(s)	894
Eco53kI	GAGCTC	2 cut(s)	616, 973
Eco72I	CACGTG	1 cut(s)	1606
Eco88I	CYCGRG	1 cut(s)	251
EcoICRI	GAGCTC	2 cut(s)	616, 973
EcoNI	CCTNNNNNAGG	1 cut(s)	626
EcoO109I	RGGNCCY	3 cut(s)	1489, 1650, 1651
EcoRI	GAATTC	1 cut(s)	1121
EcoRII	CCWGG	5 cut(s)	621, 788, 876, 1587, 1653
EcoT38I	GRGCYC	3 cut(s)	618, 975, 1654
Esp3I	CGTCTC	2 cut(s)	1313, 1427
FaeI	CATG	6 cut(s)	245, 304, 1177, 1219, 1646, 1674
FaiI	YATR	8 cut(s)	243, 302, 517, 519, 1175, 1217, 1644, 1672
FaqI	GGGAC	4 cut(s)	305, 724, 1066, 1475
FatI	CATG	6 cut(s)	241, 300, 1173, 1215, 1642, 1670
FauI	CCCGC	6 cut(s)	1014, 1471, 1479, 1494, 1500, 1513
FauNDI	CATATG	1 cut(s)	517
FbaI	TGATCA	1 cut(s)	520
FblI	GTMKAC	3 cut(s)	261, 477, 1299
FokI	GGATG	2 cut(s)	405, 1250
FriOI	GRGCYC	3 cut(s)	618, 975, 1654
FspBI	CTAG	2 cut(s)	1256, 1271
FspI	TGCGCA	1 cut(s)	1019
GlaI	GCGC	7 cut(s)	113, 882, 894, 1019, 1220, 1249, 1519
GsaI	CCCAGC	2 cut(s)	174, 445
GsuI	CTGGAG	3 cut(s)	686, 719, 1382
HaeII	RGCGCY	2 cut(s)	884, 896
HaeIII	GGCC	8 cut(s)	939, 948, 1316, 1450, 1532, 1565, 1652, 1661
HgaI	GACGC	2 cut(s)	737, 1403
HhaI	GCGC	7 cut(s)	114, 883, 895, 1020, 1221, 1250, 1520
Hin1I	GRCGYC	2 cut(s)	219, 1331
Hin1II	CATG	6 cut(s)	245, 304, 1177, 1219, 1646, 1674
Hin6I	GCGC	7 cut(s)	112, 881, 893, 1018, 1219, 1248, 1518
HinP1I	GCGC	7 cut(s)	112, 881, 893, 1018, 1219, 1248, 1518
HincII	GTYRAC	2 cut(s)	262, 1300
HindII	GTYRAC	2 cut(s)	262, 1300
HphI	GGTGA	7 cut(s)	221, 230, 556, 643, 1015, 1078, 1432
Hpy166II	GTNNAC	6 cut(s)	262, 451, 478, 547, 916, 1300
Hpy8I	GTNNAC	6 cut(s)	262, 451, 478, 547, 916, 1300
HpyAV	CCTTC	6 cut(s)	117, 522, 1136, 1150, 1165, 1172
HpyCH4III	ACNGT	2 cut(s)	599, 1285
HpyCH4V	TGCA	1 cut(s)	319
HpyF3I	CTNAG	6 cut(s)	341, 390, 627, 1092, 1226, 1541
Hsp92I	GRCGYC	2 cut(s)	219, 1331
Hsp92II	CATG	6 cut(s)	245, 304, 1177, 1219, 1646, 1674
HspAI	GCGC	7 cut(s)	112, 881, 893, 1018, 1219, 1248, 1518
KflI	GGGWCCC	1 cut(s)	1489
Ksp22I	TGATCA	1 cut(s)	520
KspI	CCGCGG	2 cut(s)	594, 714
Kzo9I	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
LmnI	GCTCC	7 cut(s)	577, 888, 908, 1235, 1325, 1537, 1624
Lsp1109I	GCAGC	3 cut(s)	194, 1002, 1487
LweI	GCATC	2 cut(s)	123, 1029
MaeI	CTAG	2 cut(s)	1256, 1271
MaeIII	GTNAC	1 cut(s)	13
MalI	GATC	9 cut(s)	273, 435, 522, 584, 635, 1106, 1166, 1430, 1457
MboI	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
MboII	GAAGA	4 cut(s)	266, 1360, 1438, 1465
MfeI	CAATTG	1 cut(s)	1374
MflI	RGATCY	1 cut(s)	271
MhlI	GDGCHC	3 cut(s)	618, 975, 1654
MlsI	TGGCCA	1 cut(s)	1661
MluCI	AATT	5 cut(s)	490, 798, 837, 1121, 1374
MluNI	TGGCCA	1 cut(s)	1661
MlyI	GAGTC	5 cut(s)	220, 287, 320, 599, 1394
MmeI	TCCRAC	4 cut(s)	240, 480, 576, 1026
Mox20I	TGGCCA	1 cut(s)	1661
MroXI	GAANNNNTTC	2 cut(s)	1125, 1509
MscI	TGGCCA	1 cut(s)	1661
MseI	TTAA	1 cut(s)	336
MslI	CAYNNNNRTG	1 cut(s)	1675
Msp20I	TGGCCA	1 cut(s)	1661
MspA1I	CMGCKG	5 cut(s)	364, 445, 593, 713, 1478
MspR9I	CCNGG	8 cut(s)	407, 472, 623, 790, 878, 1407, 1589, 1655
MunI	CAATTG	1 cut(s)	1374
MvaI	CCWGG	5 cut(s)	623, 790, 878, 1589, 1655
MvnI	CGCG	7 cut(s)	112, 593, 713, 1248, 1250, 1397, 1520
NciI	CCSGG	3 cut(s)	407, 472, 1407
NdeI	CATATG	1 cut(s)	517
NdeII	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
NlaIII	CATG	6 cut(s)	245, 304, 1177, 1219, 1646, 1674
NlaIV	GGNNCC	6 cut(s)	904, 1404, 1490, 1491, 1601, 1652
NmeAIII	GCCGAG	3 cut(s)	921, 1003, 1342
NsbI	TGCGCA	1 cut(s)	1019
PaeR7I	CTCGAG	1 cut(s)	251
PagI	TCATGA	1 cut(s)	300
PcsI	WCGNNNNNNNCGW	7 cut(s)	258, 561, 570, 609, 848, 1302, 1328
PdmI	GAANNNNTTC	2 cut(s)	1125, 1509
PfeI	GAWTC	6 cut(s)	96, 235, 394, 1110, 1147, 1195
PflFI	GACNNNGTC	1 cut(s)	329
PfoI	TCCNGGA	1 cut(s)	405
PinAI	ACCGGT	1 cut(s)	758
PleI	GAGTC	5 cut(s)	220, 287, 320, 599, 1393
PmaCI	CACGTG	1 cut(s)	1606
PmlI	CACGTG	1 cut(s)	1606
PpsI	GAGTC	5 cut(s)	220, 287, 320, 599, 1393
Ppu21I	YACGTR	1 cut(s)	1606
PpuMI	RGGWCCY	1 cut(s)	1489
Psp124BI	GAGCTC	2 cut(s)	618, 975
Psp5II	RGGWCCY	1 cut(s)	1489
Psp6I	CCWGG	5 cut(s)	621, 788, 876, 1587, 1653
PspCI	CACGTG	1 cut(s)	1606
PspFI	CCCAGC	2 cut(s)	170, 441
PspGI	CCWGG	5 cut(s)	621, 788, 876, 1587, 1653
PspN4I	GGNNCC	6 cut(s)	904, 1404, 1490, 1491, 1601, 1652
PspOMI	GGGCCC	1 cut(s)	1650
PspPI	GGNCC	8 cut(s)	448, 999, 1489, 1530, 1564, 1585, 1650, 1651
PspPPI	RGGWCCY	1 cut(s)	1489
PsuI	RGATCY	1 cut(s)	271
PsyI	GACNNNGTC	1 cut(s)	329
PvuII	CAGCTG	2 cut(s)	364, 445
RsaI	GTAC	5 cut(s)	9, 413, 953, 1046, 1211
RsaNI	GTAC	5 cut(s)	8, 412, 952, 1045, 1210
RseI	CAYNNNNRTG	1 cut(s)	1675
SacI	GAGCTC	2 cut(s)	618, 975
SacII	CCGCGG	2 cut(s)	594, 714
SalI	GTCGAC	2 cut(s)	260, 1298
SaqAI	TTAA	1 cut(s)	336
Sau3AI	GATC	9 cut(s)	271, 433, 520, 582, 633, 1104, 1164, 1428, 1455
Sau96I	GGNCC	8 cut(s)	448, 999, 1489, 1530, 1564, 1585, 1650, 1651
SchI	GAGTC	5 cut(s)	220, 287, 320, 599, 1394
ScrFI	CCNGG	8 cut(s)	407, 472, 623, 790, 878, 1407, 1589, 1655
SduI	GDGCHC	3 cut(s)	618, 975, 1654
SfaNI	GCATC	2 cut(s)	123, 1029
SfiI	GGCCNNNNNGGCC	2 cut(s)	945, 1658
Sfr274I	CTCGAG	1 cut(s)	251
Sfr303I	CCGCGG	2 cut(s)	594, 714
SgrAI	CRCCGGYG	1 cut(s)	1009
SgrBI	CCGCGG	2 cut(s)	594, 714
SgrDI	CGTCGACG	1 cut(s)	1298
SinI	GGWCC	4 cut(s)	448, 999, 1489, 1585
SlaI	CTCGAG	1 cut(s)	251
SmiMI	CAYNNNNRTG	1 cut(s)	1675
SmlI	CTYRAG	2 cut(s)	251, 1100
SmoI	CTYRAG	2 cut(s)	251, 1100
Sse9I	AATT	5 cut(s)	490, 798, 837, 1121, 1374
SspMI	CTAG	2 cut(s)	1256, 1271
SstI	GAGCTC	2 cut(s)	618, 975
StyD4I	CCNGG	8 cut(s)	405, 470, 621, 788, 876, 1405, 1587, 1653
TaaI	ACNGT	2 cut(s)	599, 1285
TaqII	GACCGA	1 cut(s)	542
TasI	AATT	5 cut(s)	490, 798, 837, 1121, 1374
TauI	GCSGC	7 cut(s)	593, 713, 948, 1224, 1400, 1466, 1618
TfiI	GAWTC	6 cut(s)	96, 235, 394, 1110, 1147, 1195
Tru1I	TTAA	1 cut(s)	336
Tru9I	TTAA	1 cut(s)	336
TscAI	CASTG	1 cut(s)	1574
TseI	GCWGC	3 cut(s)	182, 1015, 1475
TspDTI	ATGAA	5 cut(s)	504, 524, 559, 980, 1162
TspGWI	ACGGA	1 cut(s)	136
TspRI	CASTG	1 cut(s)	1574
Tth111I	GACNNNGTC	1 cut(s)	329
VpaK11BI	GGWCC	4 cut(s)	448, 999, 1489, 1585
XagI	CCTNNNNNAGG	1 cut(s)	626
XapI	RAATTY	3 cut(s)	490, 837, 1121
XhoI	CTCGAG	1 cut(s)	251
XmiI	GTMKAC	3 cut(s)	261, 477, 1299
XmnI	GAANNNNTTC	2 cut(s)	1125, 1509
XspI	CTAG	2 cut(s)	1256, 1271
ZraI	GACGTC	2 cut(s)	220, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.