Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0014425

Physical Location & Seq

Genomic Coordinates Forward (+)

13716558 .. 13719087

Gene Structure 2530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG159100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGAGAGTACCCGTTACCACACCCCAAACCAACAACAACAACAGCAACCAATCTCCAAACCCTAAACCCGAAACCAATCTCGGATTCCACACTCCTTCGCGCATCAATCCAAACCTCTGCTACGAGCCAACCTCCGTTCTCGACCTCCGCCACAGCCCCAGCCCAGTGGCGGCCGATAAGCCGTCAAAAGTTTCAGCTATCTCCGACGTCCTGACTCACCCGAATCACCATGAGCCTCTCGAGTGGGTCGACGAGCAGGATCTTCACAACTTGGACTGGGACTCCCTCATGAGAGACTTGGGCTTGCACGACGACTCTGTCCTTAACCTGAGACCTACTACTAATACACAGCTGAACCCCCACCCCAACAGCGAGCCTCAGATTCCTCATCTCCCGGAGTACCCTCATCCACAGCCCTTCGATCCCACCCAGCTGGTCCACTCCGACTTCAACCTCTCCGGGGTCTACTCCTCCCAGAATTTCAGCCACCACAATCTGCCTTCATATGATCAGACCGATATTCATTCCTCGGTGAACTCCAACGTGGGGTTCGATTTCATCGAGGAGCTGATCCGAGCCGCGGACTGTTTCGACTCTGACGAGCTCAACCTGGCTCAGGTGATCCTCGACCGGCTCAACCAACGTCAGCGATTGTCCTCGCCCAACCCAAAACCTCTTGGAAAACCTCTCCAGCGAGCCGCGGTTTATTTCAAAGACGCTCTCCAGTCCCTCCTCAACAACTCCACCGGTTCAAGTCCGGTTCGCAACCTCTCCTCCTGGTCTGAGATTGTCCAGACCATCAGAGCCTACAAGGGCTTTTCGGGGATTTCGCCTATCCCGATGTTCTCGCACTTCACAACTAACCAGGCGCTCCTCGAAGCGCTCAACGGCTCCAGCTTCGTCCACGTCATCGACTTCGACATCGGCCTCGGCGGCCAGTACGCTTCGCTGATGAAAGAGCTCGCCGAGAAAGCTGACTTGTCGAGGTCCAACCCGCCGGTGCTGCGCATCACCGCCGTCGTGCCGGAGGAGTACGCCGTCGAGAGCAGGCTGGTGAGAGATAACTTGTCCCAGTTCGCTCAGGAACTCAAGATCAGATTCCAAATCGAATTCCTTCTCGTCCGAACGTTCGAGATTCTCTCCTTCAAGGCGATCAAGTTCATGGAAGGAGAGAAAACGGCGATTCTGCTGTCGCCGTACATCATGCGCCGCCTCAGCTCCGCCGAGAACGTCCGCTCGTTTCTCGGCGACATCCGGCGCGTGTCGCCGACCGTGGTGGTGTTCGTCGACGGCGAGGGGCTGGCCGAGACGGGAGCGACGTCGTTCAGGAGGAACTTCGTGTCCGGGCTGGAGTTCTTCTCGATTGTTTTGGAGTCGCTGGACGCGGCGGTGCCGGGTGGCGAGATGGTGAGGAAGATCGAGACGTTTCTGTTGAGGCCGAAGATCGAGGCCGCAGTGGAGGCAGCGGGGAGGAGGGTCCCGCAGTGGCGGGAAGTGTTTCACGGCGCGGGAATGAGGGCCGTGGAGCTGAGCCAGTTTGCGGACTTTCAGGCCCAGTGCTTGTTGGGCAAGGTCCAGGTCAGGGGGTTCCACGTGGCGAAGCAGCAGGCGGAGCTGGTGCTGTGCTGGCATGATAGGGCCCTGGTGGCCACGTCGGCATGGAGGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048831 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

556

Amino Acids

62.24

Weight (kDa)

5.89

Isoelectric Point (pI)

44.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	188 - 555	1.1e-97	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36710
fragaria_vesca	FvH4_1g13740
malus_domestica	MD02G1152200.v1.1 MD15G1266500.v1.1
prunus_persica	Prupe.7G150900_v2.0.a1
pyrus_communis	pycom02g11950
rosa_chinensis	RchiOBHm_Chr2g0102171
rosa_laevigata	RLG00000017134
rosa_multiflora	Rmu_co8491613.1_g000001 Rmu_sc0000157.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140730
rosa_rugosa	Rorug02G0104800
rosa_samantha	Rh2AG153200 Rh2BG159100 Rh2CG158600 Rh2DG158800
rosa_wichuraiana	Rw2G011960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	317
AatII	GACGTC	2 cut(s)	210, 1322
Acc16I	TGCGCA	1 cut(s)	1007
AccB1I	GGYRCC	1 cut(s)	1390
AccBSI	CCGCTC	1 cut(s)	1236
AccI	GTMKAC	3 cut(s)	249, 465, 1287
AccII	CGCG	6 cut(s)	100, 581, 701, 1260, 1385, 1508
AclI	AACGTT	1 cut(s)	1127
AclWI	GGATC	4 cut(s)	267, 416, 565, 616
AcoI	YGGCCR	4 cut(s)	171, 934, 1302, 1647
AcsI	RAATTY	2 cut(s)	478, 1109
AcvI	CACGTG	1 cut(s)	1594
AcyI	GRCGYC	2 cut(s)	207, 1319
AfaI	GTAC	5 cut(s)	9, 401, 941, 1034, 1199
AfeI	AGCGCT	1 cut(s)	882
AfiI	CCNNNNNNNGG	7 cut(s)	169, 460, 546, 580, 616, 1540, 1582
AgeI	ACCGGT	1 cut(s)	746
AgsI	TTSAA	4 cut(s)	451, 712, 753, 1147
AjiI	CACGTC	2 cut(s)	907, 1653
AjnI	CCWGG	5 cut(s)	609, 776, 864, 1575, 1641
AjuI	GAANNNNNNNTTGG	4 cut(s)	68, 100, 533, 565
AloI	GAACNNNNNNTCC	2 cut(s)	1325, 1357
Alw21I	GWGCWC	2 cut(s)	606, 963
Alw26I	GTCTC	4 cut(s)	288, 325, 1301, 1415
AlwI	GGATC	4 cut(s)	267, 416, 565, 616
Ama87I	CYCGRG	1 cut(s)	239
Aor51HI	AGCGCT	1 cut(s)	882
ApaI	GGGCCC	1 cut(s)	1642
ApeKI	GCWGC	3 cut(s)	1003, 1463, 1603
ApoI	RAATTY	2 cut(s)	478, 1109
AsiGI	ACCGGT	1 cut(s)	746
Asp700I	GAANNNNTTC	2 cut(s)	1113, 1497
AspLEI	GCGC	7 cut(s)	102, 871, 883, 1008, 1209, 1260, 1508
AspS9I	GGNCC	8 cut(s)	436, 987, 1477, 1518, 1552, 1573, 1638, 1639
AsuC2I	CCSGG	4 cut(s)	395, 460, 1345, 1395
AsuHPI	GGTGA	7 cut(s)	209, 218, 544, 631, 1003, 1066, 1420
AvaI	CYCGRG	1 cut(s)	239
AvaII	GGWCC	4 cut(s)	436, 987, 1477, 1573
BaeGI	GKGCMC	1 cut(s)	1642
BalI	TGGCCA	1 cut(s)	1649
BanI	GGYRCC	1 cut(s)	1390
BanII	GRGCYC	3 cut(s)	606, 963, 1642
BbrPI	CACGTG	1 cut(s)	1594
Bbv12I	GWGCWC	2 cut(s)	606, 963
BbvCI	CCTCAGC	1 cut(s)	1214
BbvI	GCAGC	3 cut(s)	990, 1475, 1615
BccI	CCATC	2 cut(s)	806, 1399
BceAI	ACGGC	9 cut(s)	166, 904, 1001, 1022, 1180, 1194, 1306, 1505, 1519
BciT130I	CCWGG	5 cut(s)	611, 778, 866, 1577, 1643
BclI	TGATCA	1 cut(s)	508
BcnI	CCSGG	4 cut(s)	395, 460, 1345, 1395
BcoDI	GTCTC	4 cut(s)	288, 325, 1301, 1415
BfoI	RGCGCY	2 cut(s)	872, 884
BglI	GCCNNNNNGGC	3 cut(s)	933, 1646, 1655
BlpI	GCTNAGC	1 cut(s)	1529
Bme1390I	CCNGG	9 cut(s)	395, 460, 611, 778, 866, 1345, 1395, 1577, 1643
Bme18I	GGWCC	4 cut(s)	436, 987, 1477, 1573
BmeT110I	CYCGRG	1 cut(s)	239
BmgBI	CACGTC	2 cut(s)	907, 1653
BmgT120I	GGNCC	8 cut(s)	436, 987, 1477, 1518, 1552, 1573, 1638, 1639
BmiI	GGNNCC	6 cut(s)	892, 1392, 1478, 1479, 1589, 1640
BmrFI	CCNGG	9 cut(s)	395, 460, 611, 778, 866, 1345, 1395, 1577, 1643
BmrI	ACTGGG	4 cut(s)	158, 286, 1066, 1549
BmsI	GCATC	2 cut(s)	111, 1017
BmuI	ACTGGG	4 cut(s)	158, 286, 1066, 1549
BplI	GAGNNNNNCTC	6 cut(s)	116, 148, 1124, 1156, 1343, 1375
BpmI	CTGGAG	4 cut(s)	674, 707, 877, 1370
Bpu10I	CCTNAGC	3 cut(s)	615, 1080, 1214
Bpu1102I	GCTNAGC	1 cut(s)	1529
BpuEI	CTTGAG	1 cut(s)	1073
BpuMI	CCSGG	4 cut(s)	395, 460, 1345, 1395
BsaAI	YACGTR	1 cut(s)	1594
BsaHI	GRCGYC	2 cut(s)	207, 1319
BsaI	GGTCTC	1 cut(s)	325
BsaJI	CCNNGG	8 cut(s)	459, 528, 579, 699, 928, 1272, 1521, 1641
BsaWI	WCCGGW	2 cut(s)	746, 757
BsaXI	ACNNNNNCTCC	4 cut(s)	266, 296, 758, 788
Bsc4I	CCNNNNNNNGG	7 cut(s)	169, 460, 546, 580, 616, 1540, 1582
Bse118I	RCCGGY	3 cut(s)	630, 746, 997
Bse1I	ACTGG	7 cut(s)	164, 281, 724, 937, 1072, 1534, 1555
BseBI	CCWGG	5 cut(s)	611, 778, 866, 1577, 1643
BseDI	CCNNGG	8 cut(s)	459, 528, 579, 699, 928, 1272, 1521, 1641
BseGI	GGATG	2 cut(s)	406, 1251
BseLI	CCNNNNNNNGG	7 cut(s)	169, 460, 546, 580, 616, 1540, 1582
BseMII	CTCAG	7 cut(s)	320, 392, 629, 774, 1094, 1228, 1520
BseNI	ACTGG	7 cut(s)	164, 281, 724, 937, 1072, 1534, 1555
BseRI	GAGGAG	7 cut(s)	460, 578, 722, 763, 863, 1043, 1486
BseSI	GKGCMC	1 cut(s)	1642
BseX3I	CGGCCG	1 cut(s)	171
BseXI	GCAGC	3 cut(s)	990, 1475, 1615
BseYI	CCCAGC	2 cut(s)	158, 429
Bsh1236I	CGCG	6 cut(s)	100, 581, 701, 1260, 1385, 1508
Bsh1285I	CGRYCG	3 cut(s)	174, 631, 1272
BshNI	GGYRCC	1 cut(s)	1390
BshTI	ACCGGT	1 cut(s)	746
BsiEI	CGRYCG	3 cut(s)	174, 631, 1272
BsiHKAI	GWGCWC	2 cut(s)	606, 963
BsiHKCI	CYCGRG	1 cut(s)	239
BslFI	GGGAC	4 cut(s)	293, 712, 1054, 1463
BslI	CCNNNNNNNGG	7 cut(s)	169, 460, 546, 580, 616, 1540, 1582
BsmAI	GTCTC	4 cut(s)	288, 325, 1301, 1415
BsmBI	CGTCTC	2 cut(s)	1301, 1415
BsmFI	GGGAC	4 cut(s)	293, 712, 1054, 1463
Bso31I	GGTCTC	1 cut(s)	325
BsoBI	CYCGRG	1 cut(s)	239
Bsp120I	GGGCCC	1 cut(s)	1638
Bsp1286I	GDGCHC	3 cut(s)	606, 963, 1642
Bsp143I	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
Bsp1720I	GCTNAGC	1 cut(s)	1529
BspCNI	CTCAG	7 cut(s)	321, 391, 628, 775, 1093, 1227, 1521
BspFNI	CGCG	6 cut(s)	100, 581, 701, 1260, 1385, 1508
BspHI	TCATGA	1 cut(s)	288
BspLI	GGNNCC	6 cut(s)	892, 1392, 1478, 1479, 1589, 1640
BspPI	GGATC	4 cut(s)	267, 416, 565, 616
BspT107I	GGYRCC	1 cut(s)	1390
BspTNI	GGTCTC	1 cut(s)	325
BsrBI	CCGCTC	1 cut(s)	1236
BsrFI	RCCGGY	3 cut(s)	630, 746, 997
BsrI	ACTGG	7 cut(s)	164, 281, 724, 937, 1072, 1534, 1555
BssAI	RCCGGY	3 cut(s)	630, 746, 997
BssECI	CCNNGG	8 cut(s)	459, 528, 579, 699, 928, 1272, 1521, 1641
BssMI	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
BssNI	GRCGYC	2 cut(s)	207, 1319
Bst2UI	CCWGG	5 cut(s)	611, 778, 866, 1577, 1643
Bst4CI	ACNGT	2 cut(s)	587, 1273
BstACI	GRCGYC	2 cut(s)	207, 1319
BstBAI	YACGTR	1 cut(s)	1594
BstC8I	GCNNGC	8 cut(s)	305, 374, 696, 963, 1049, 1302, 1608, 1628
BstDEI	CTNAG	7 cut(s)	329, 378, 615, 783, 1080, 1214, 1529
BstDSI	CCRYGG	4 cut(s)	579, 699, 1272, 1521
BstENI	CCTNNNNNAGG	1 cut(s)	614
BstF5I	GGATG	2 cut(s)	406, 1251
BstFNI	CGCG	6 cut(s)	100, 581, 701, 1260, 1385, 1508
BstH2I	RGCGCY	2 cut(s)	872, 884
BstHHI	GCGC	7 cut(s)	102, 871, 883, 1008, 1209, 1260, 1508
BstKTI	GATC	9 cut(s)	262, 424, 511, 573, 624, 1095, 1155, 1419, 1446
BstMAI	GTCTC	4 cut(s)	288, 325, 1301, 1415
BstMBI	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
BstMCI	CGRYCG	3 cut(s)	174, 631, 1272
BstNI	CCWGG	5 cut(s)	611, 778, 866, 1577, 1643
BstSCI	CCNGG	9 cut(s)	393, 458, 609, 776, 864, 1343, 1393, 1575, 1641
BstSLI	GKGCMC	1 cut(s)	1642
BstUI	CGCG	6 cut(s)	100, 581, 701, 1260, 1385, 1508
BstV1I	GCAGC	3 cut(s)	990, 1475, 1615
BstX2I	RGATCY	1 cut(s)	259
BstXI	CCANNNNNNTGG	2 cut(s)	166, 433
BstYI	RGATCY	1 cut(s)	259
BstZI	CGGCCG	1 cut(s)	171
BtgI	CCRYGG	4 cut(s)	579, 699, 1272, 1521
BtrI	CACGTC	2 cut(s)	907, 1653
BtsCI	GGATG	2 cut(s)	406, 1251
BtsI	GCAGTG	2 cut(s)	1461, 1490
BtsIMutI	CAGTG	4 cut(s)	171, 1461, 1490, 1562
Cac8I	GCNNGC	8 cut(s)	305, 374, 696, 963, 1049, 1302, 1608, 1628
CciI	TCATGA	1 cut(s)	288
CfoI	GCGC	7 cut(s)	102, 871, 883, 1008, 1209, 1260, 1508
Cfr10I	RCCGGY	3 cut(s)	630, 746, 997
Cfr13I	GGNCC	8 cut(s)	436, 987, 1477, 1518, 1552, 1573, 1638, 1639
Cfr42I	CCGCGG	2 cut(s)	582, 702
CseI	GACGC	2 cut(s)	725, 1391
Csp6I	GTAC	5 cut(s)	8, 400, 940, 1033, 1198
CspAI	ACCGGT	1 cut(s)	746
CviAII	CATG	6 cut(s)	230, 289, 1162, 1204, 1631, 1659
CviQI	GTAC	5 cut(s)	8, 400, 940, 1033, 1198
DdeI	CTNAG	7 cut(s)	329, 378, 615, 783, 1080, 1214, 1529
DpnI	GATC	9 cut(s)	261, 423, 510, 572, 623, 1094, 1154, 1418, 1445
DpnII	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
DrdI	GACNNNNNNGTC	1 cut(s)	317
DseDI	GACNNNNNNGTC	1 cut(s)	317
EaeI	YGGCCR	4 cut(s)	171, 934, 1302, 1647
EagI	CGGCCG	1 cut(s)	171
EciI	GGCGGA	3 cut(s)	137, 1210, 1625
Ecl136II	GAGCTC	2 cut(s)	604, 961
EclXI	CGGCCG	1 cut(s)	171
Eco24I	GRGCYC	3 cut(s)	606, 963, 1642
Eco31I	GGTCTC	1 cut(s)	325
Eco47I	GGWCC	4 cut(s)	436, 987, 1477, 1573
Eco47III	AGCGCT	1 cut(s)	882
Eco52I	CGGCCG	1 cut(s)	171
Eco53kI	GAGCTC	2 cut(s)	604, 961
Eco72I	CACGTG	1 cut(s)	1594
Eco88I	CYCGRG	1 cut(s)	239
EcoICRI	GAGCTC	2 cut(s)	604, 961
EcoNI	CCTNNNNNAGG	1 cut(s)	614
EcoO109I	RGGNCCY	3 cut(s)	1477, 1638, 1639
EcoRI	GAATTC	1 cut(s)	1109
EcoRII	CCWGG	5 cut(s)	609, 776, 864, 1575, 1641
EcoT38I	GRGCYC	3 cut(s)	606, 963, 1642
Esp3I	CGTCTC	2 cut(s)	1301, 1415
FaeI	CATG	6 cut(s)	233, 292, 1165, 1207, 1634, 1662
FaiI	YATR	8 cut(s)	231, 290, 505, 507, 1163, 1205, 1632, 1660
FaqI	GGGAC	4 cut(s)	293, 712, 1054, 1463
FatI	CATG	6 cut(s)	229, 288, 1161, 1203, 1630, 1658
FauI	CCCGC	5 cut(s)	1002, 1459, 1482, 1488, 1501
FauNDI	CATATG	1 cut(s)	505
FbaI	TGATCA	1 cut(s)	508
FblI	GTMKAC	3 cut(s)	249, 465, 1287
FokI	GGATG	2 cut(s)	393, 1238
FriOI	GRGCYC	3 cut(s)	606, 963, 1642
FspI	TGCGCA	1 cut(s)	1007
GlaI	GCGC	7 cut(s)	101, 870, 882, 1007, 1208, 1259, 1507
GsaI	CCCAGC	2 cut(s)	162, 433
GsuI	CTGGAG	4 cut(s)	674, 707, 877, 1370
HaeII	RGCGCY	2 cut(s)	872, 884
HgaI	GACGC	2 cut(s)	725, 1391
HhaI	GCGC	7 cut(s)	102, 871, 883, 1008, 1209, 1260, 1508
Hin1I	GRCGYC	2 cut(s)	207, 1319
Hin1II	CATG	6 cut(s)	233, 292, 1165, 1207, 1634, 1662
Hin6I	GCGC	7 cut(s)	100, 869, 881, 1006, 1207, 1258, 1506
HinP1I	GCGC	7 cut(s)	100, 869, 881, 1006, 1207, 1258, 1506
HincII	GTYRAC	2 cut(s)	250, 1288
HindII	GTYRAC	2 cut(s)	250, 1288
HphI	GGTGA	7 cut(s)	209, 218, 544, 631, 1003, 1066, 1420
Hpy166II	GTNNAC	6 cut(s)	250, 439, 466, 535, 904, 1288
Hpy8I	GTNNAC	6 cut(s)	250, 439, 466, 535, 904, 1288
HpyAV	CCTTC	6 cut(s)	105, 427, 510, 1124, 1153, 1160
HpyCH4III	ACNGT	2 cut(s)	587, 1273
HpyCH4V	TGCA	1 cut(s)	307
HpyF3I	CTNAG	7 cut(s)	329, 378, 615, 783, 1080, 1214, 1529
Hsp92I	GRCGYC	2 cut(s)	207, 1319
Hsp92II	CATG	6 cut(s)	233, 292, 1165, 1207, 1634, 1662
HspAI	GCGC	7 cut(s)	100, 869, 881, 1006, 1207, 1258, 1506
KflI	GGGWCCC	1 cut(s)	1477
Ksp22I	TGATCA	1 cut(s)	508
KspI	CCGCGG	2 cut(s)	582, 702
Kzo9I	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
LmnI	GCTCC	7 cut(s)	565, 876, 896, 1223, 1313, 1525, 1612
Lsp1109I	GCAGC	3 cut(s)	990, 1475, 1615
LweI	GCATC	2 cut(s)	111, 1017
MaeIII	GTNAC	1 cut(s)	13
MalI	GATC	9 cut(s)	261, 423, 510, 572, 623, 1094, 1154, 1418, 1445
MbiI	CCGCTC	1 cut(s)	1236
MboI	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
MboII	GAAGA	4 cut(s)	254, 1348, 1426, 1453
MflI	RGATCY	1 cut(s)	259
MhlI	GDGCHC	3 cut(s)	606, 963, 1642
MlsI	TGGCCA	1 cut(s)	1649
MluCI	AATT	2 cut(s)	478, 1109
MluNI	TGGCCA	1 cut(s)	1649
MlyI	GAGTC	5 cut(s)	208, 275, 308, 587, 1382
MmeI	TCCRAC	4 cut(s)	228, 468, 564, 1014
Mox20I	TGGCCA	1 cut(s)	1649
MroXI	GAANNNNTTC	2 cut(s)	1113, 1497
MscI	TGGCCA	1 cut(s)	1649
MseI	TTAA	1 cut(s)	324
MslI	CAYNNNNRTG	1 cut(s)	1663
Msp20I	TGGCCA	1 cut(s)	1649
MspA1I	CMGCKG	5 cut(s)	352, 433, 581, 701, 1466
MspR9I	CCNGG	9 cut(s)	395, 460, 611, 778, 866, 1345, 1395, 1577, 1643
MvaI	CCWGG	5 cut(s)	611, 778, 866, 1577, 1643
MvnI	CGCG	6 cut(s)	100, 581, 701, 1260, 1385, 1508
NciI	CCSGG	4 cut(s)	395, 460, 1345, 1395
NdeI	CATATG	1 cut(s)	505
NdeII	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
NlaIII	CATG	6 cut(s)	233, 292, 1165, 1207, 1634, 1662
NlaIV	GGNNCC	6 cut(s)	892, 1392, 1478, 1479, 1589, 1640
NmeAIII	GCCGAG	5 cut(s)	909, 991, 1224, 1249, 1330
NsbI	TGCGCA	1 cut(s)	1007
PaeR7I	CTCGAG	1 cut(s)	239
PagI	TCATGA	1 cut(s)	288
PcsI	WCGNNNNNNNCGW	7 cut(s)	246, 549, 558, 597, 836, 1290, 1316
PdmI	GAANNNNTTC	2 cut(s)	1113, 1497
PfeI	GAWTC	6 cut(s)	84, 223, 382, 1098, 1135, 1183
PflFI	GACNNNGTC	1 cut(s)	317
PfoI	TCCNGGA	1 cut(s)	393
PinAI	ACCGGT	1 cut(s)	746
PleI	GAGTC	5 cut(s)	208, 275, 308, 587, 1381
PmaCI	CACGTG	1 cut(s)	1594
PmlI	CACGTG	1 cut(s)	1594
PpsI	GAGTC	5 cut(s)	208, 275, 308, 587, 1381
Ppu21I	YACGTR	1 cut(s)	1594
PpuMI	RGGWCCY	1 cut(s)	1477
Psp124BI	GAGCTC	2 cut(s)	606, 963
Psp1406I	AACGTT	1 cut(s)	1127
Psp5II	RGGWCCY	1 cut(s)	1477
Psp6I	CCWGG	5 cut(s)	609, 776, 864, 1575, 1641
PspCI	CACGTG	1 cut(s)	1594
PspFI	CCCAGC	2 cut(s)	158, 429
PspGI	CCWGG	5 cut(s)	609, 776, 864, 1575, 1641
PspN4I	GGNNCC	6 cut(s)	892, 1392, 1478, 1479, 1589, 1640
PspOMI	GGGCCC	1 cut(s)	1638
PspPI	GGNCC	8 cut(s)	436, 987, 1477, 1518, 1552, 1573, 1638, 1639
PspPPI	RGGWCCY	1 cut(s)	1477
PsuI	RGATCY	1 cut(s)	259
PsyI	GACNNNGTC	1 cut(s)	317
PvuII	CAGCTG	2 cut(s)	352, 433
RsaI	GTAC	5 cut(s)	9, 401, 941, 1034, 1199
RsaNI	GTAC	5 cut(s)	8, 400, 940, 1033, 1198
RseI	CAYNNNNRTG	1 cut(s)	1663
SacI	GAGCTC	2 cut(s)	606, 963
SacII	CCGCGG	2 cut(s)	582, 702
SalI	GTCGAC	2 cut(s)	248, 1286
SaqAI	TTAA	1 cut(s)	324
Sau3AI	GATC	9 cut(s)	259, 421, 508, 570, 621, 1092, 1152, 1416, 1443
Sau96I	GGNCC	8 cut(s)	436, 987, 1477, 1518, 1552, 1573, 1638, 1639
SchI	GAGTC	5 cut(s)	208, 275, 308, 587, 1382
ScrFI	CCNGG	9 cut(s)	395, 460, 611, 778, 866, 1345, 1395, 1577, 1643
SduI	GDGCHC	3 cut(s)	606, 963, 1642
SfaNI	GCATC	2 cut(s)	111, 1017
SfiI	GGCCNNNNNGGCC	2 cut(s)	933, 1646
Sfr274I	CTCGAG	1 cut(s)	239
Sfr303I	CCGCGG	2 cut(s)	582, 702
SgrAI	CRCCGGYG	1 cut(s)	997
SgrBI	CCGCGG	2 cut(s)	582, 702
SgrDI	CGTCGACG	1 cut(s)	1286
SinI	GGWCC	4 cut(s)	436, 987, 1477, 1573
SlaI	CTCGAG	1 cut(s)	239
SmiMI	CAYNNNNRTG	1 cut(s)	1663
SmlI	CTYRAG	2 cut(s)	239, 1088
SmoI	CTYRAG	2 cut(s)	239, 1088
Sse9I	AATT	2 cut(s)	478, 1109
SstI	GAGCTC	2 cut(s)	606, 963
StyD4I	CCNGG	9 cut(s)	393, 458, 609, 776, 864, 1343, 1393, 1575, 1641
TaaI	ACNGT	2 cut(s)	587, 1273
TaqII	GACCGA	1 cut(s)	530
TasI	AATT	2 cut(s)	478, 1109
TauI	GCSGC	7 cut(s)	173, 581, 701, 936, 1212, 1388, 1454
TfiI	GAWTC	6 cut(s)	84, 223, 382, 1098, 1135, 1183
Tru1I	TTAA	1 cut(s)	324
Tru9I	TTAA	1 cut(s)	324
TscAI	CASTG	4 cut(s)	171, 1461, 1490, 1562
TseI	GCWGC	3 cut(s)	1003, 1463, 1603
TspDTI	ATGAA	5 cut(s)	492, 512, 547, 968, 1150
TspGWI	ACGGA	1 cut(s)	124
TspRI	CASTG	4 cut(s)	171, 1461, 1490, 1562
Tth111I	GACNNNGTC	1 cut(s)	317
VpaK11BI	GGWCC	4 cut(s)	436, 987, 1477, 1573
XagI	CCTNNNNNAGG	1 cut(s)	614
XapI	RAATTY	2 cut(s)	478, 1109
XhoI	CTCGAG	1 cut(s)	239
XmiI	GTMKAC	3 cut(s)	249, 465, 1287
XmnI	GAANNNNTTC	2 cut(s)	1113, 1497
ZraI	GACGTC	2 cut(s)	208, 1320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.