Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0014425

Physical Location & Seq

Genomic Coordinates Forward (+)

13859930 .. 13862459

Gene Structure 2530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG158600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGAGAGTACCCGTTACCACACCCCAAACCAACAACAACAACAACAACAGCAACCAATCTCCAAACCCTAAACCCGAAACCAATCTCGGATTCCACACTCCTTCGCGCATCAATCCAAACCTCTGCTACGAGCCAACCTCCGTTCTCGACCTCCGCCACAGCCCCAGCCCAGTGGCGGCCGATAAGCCTTCAAAAGTTTCAGCTATCTCCGACGTCCTGACTCACCCGAATCACCATGAGCCTGTCGAGTGGGTCGATGAGCAGGATCTTCACAACTTGGACTGGGAATCCCTCATGATAGACTTGGGCTTGCACGACGACTCTGTCCTTAACCTGAGACCTACTACTAATACACAGCTGAACCCCCACCCCAACAGCGAGCCTCAGATTCCTCATCTCCCGGAGTACCCTCTTCCACAGCCCTTCGATCCCACCCAGCTGGTCCACTCCGACTTCAACCTCTCCGGGGTCTACTCCTCCCAGAATTTCAGCCACCACAATCTGCCTTCATATGATCAGACCGATATTCATTCCTCGGTGAACTCCAACGTGGGGTTCGATTTCATCGAGGAGCTGATCCGAGCCGCGGACTGTTTCGACTCTGACGAGCTCAACCTGGCTCAGGTGATCCTCGACCGGCTCAACCAACGTCAGCGATTGTCCTCGCCCAACCCAAAACCTCTTGGAAAACCTCTCCAGCGAGCCGCAGTTTATTTCAAAGACGCTCTCCAGTCCCTCCTCAACAACTCCACAGGTTCAAGTCCGGTTCGCAACCTCTCCTCCTGGTCTGAGATTGTCCAGACCATCAGAGCCTACAAGGGCTTTTCGGGGATTTCGCCTATCCCGATGTTCTCGCACTTCACAACTAACCAGGCGCTCCTCGAAGCGCTCAACGGCTTCAGCTTCGTCCACGTCATCGACTTCGACATCGGCCTCGGCGGCCAGTACGCTTCGCTGATGAAAGAGCTCGCCGAGAAAGCTGACGTGTCGAGGTCCAACCCGCCGGTGCTGCGCATCACCGCGGTCGTGCCGGAGGAGTACGCCGTCGAGAGCAGGCTGGTGAGAGAGAACTTGTCCCAGTTCGCTCAGGAACTCAAGATCAGATTCCAAATCGAATTCCTTCTCGTCCGAACCTTCGAGATTCTCTCCTTCAAGGCGATCAAGTTCATGGAAGGAGAGAAAACGGCGATTCTGCTGTCGCCGTACATCATGCGCCGCCTCAGCTCCGCCGAGAACGTCCGCGCGTTTCTCGGCGACATCCGGCGCGTGTCGCCTACCGTGGTGGTGTTCGTCGACGGAGAGGGGCTGGCCGAGACGGGAGCGACGTCGTTCAGGAGGAACTTCGTGTCCGGGCTGGAGTTCTTCTCGATTGTTTTGGAGTCGCTGGACGCGGCGGTGCAGGGTGGCGAGATGGTGAGGAAGATCGAGACGTTTCTGTTGAGGCCGAAGATCGAGGCGGTGGTGGAGGCAGCGGGGAGGAGGGTCCCGCAGTGGCGGGAAGTGTTTCACGGCGCGGGAATGAGGGCCGTGGAGCTGAGCCAGTTTGCGGACTTTCAGGCCCAGTGCTTGTTGGGCAAGGTCCAGGTCAGGGGGTTCCACGTGGCGAAGCGGCAGGCGGAGCTGGTGCTGTGCTGGCATGATAGGGCCCTGGTGGCCACGTCGGCATGGAGGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048831 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

558

Amino Acids

62.53

Weight (kDa)

5.85

Isoelectric Point (pI)

44.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	190 - 557	1.5e-97	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36710
fragaria_vesca	FvH4_1g13740
malus_domestica	MD02G1152200.v1.1 MD15G1266500.v1.1
prunus_persica	Prupe.7G150900_v2.0.a1
pyrus_communis	pycom02g11950
rosa_chinensis	RchiOBHm_Chr2g0102171
rosa_laevigata	RLG00000017134
rosa_multiflora	Rmu_co8491613.1_g000001 Rmu_sc0000157.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140730
rosa_rugosa	Rorug02G0104800
rosa_samantha	Rh2AG153200 Rh2BG159100 Rh2CG158600 Rh2DG158800
rosa_wichuraiana	Rw2G011960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	323
AatII	GACGTC	2 cut(s)	216, 1328
Acc16I	TGCGCA	1 cut(s)	1013
AccI	GTMKAC	2 cut(s)	471, 1293
AccII	CGCG	8 cut(s)	106, 587, 1022, 1242, 1244, 1266, 1391, 1514
AclWI	GGATC	4 cut(s)	273, 422, 571, 622
AcoI	YGGCCR	4 cut(s)	177, 940, 1308, 1653
AcsI	RAATTY	2 cut(s)	484, 1115
AcuI	CTGAAG	1 cut(s)	883
AcvI	CACGTG	1 cut(s)	1600
AcyI	GRCGYC	2 cut(s)	213, 1325
AfaI	GTAC	5 cut(s)	9, 407, 947, 1040, 1205
AfeI	AGCGCT	1 cut(s)	888
AfiI	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1546, 1588
AflIII	ACRYGT	1 cut(s)	984
AgsI	TTSAA	5 cut(s)	192, 457, 718, 759, 1153
AjiI	CACGTC	3 cut(s)	913, 985, 1659
AjnI	CCWGG	5 cut(s)	615, 782, 870, 1581, 1647
AjuI	GAANNNNNNNTTGG	4 cut(s)	74, 106, 539, 571
AloI	GAACNNNNNNTCC	2 cut(s)	1331, 1363
Alw21I	GWGCWC	2 cut(s)	612, 969
Alw26I	GTCTC	3 cut(s)	331, 1307, 1421
AlwI	GGATC	4 cut(s)	273, 422, 571, 622
Aor51HI	AGCGCT	1 cut(s)	888
AoxI	GGCC	9 cut(s)	177, 931, 940, 1308, 1442, 1524, 1557, 1644, 1653
ApaI	GGGCCC	1 cut(s)	1648
ApeKI	GCWGC	2 cut(s)	1009, 1469
ApoI	RAATTY	2 cut(s)	484, 1115
Asp700I	GAANNNNTTC	2 cut(s)	1119, 1503
AspLEI	GCGC	8 cut(s)	108, 877, 889, 1014, 1215, 1244, 1266, 1514
AspS9I	GGNCC	8 cut(s)	442, 993, 1483, 1524, 1558, 1579, 1644, 1645
AsuC2I	CCSGG	3 cut(s)	401, 466, 1351
AsuHPI	GGTGA	7 cut(s)	215, 224, 550, 637, 1009, 1072, 1426
AvaII	GGWCC	4 cut(s)	442, 993, 1483, 1579
BaeGI	GKGCMC	1 cut(s)	1648
BalI	TGGCCA	1 cut(s)	1655
BanII	GRGCYC	3 cut(s)	612, 969, 1648
BbrPI	CACGTG	1 cut(s)	1600
Bbv12I	GWGCWC	2 cut(s)	612, 969
BbvCI	CCTCAGC	1 cut(s)	1220
BbvI	GCAGC	2 cut(s)	996, 1481
BccI	CCATC	2 cut(s)	812, 1405
BceAI	ACGGC	6 cut(s)	910, 1028, 1186, 1200, 1511, 1525
BciT130I	CCWGG	5 cut(s)	617, 784, 872, 1583, 1649
BclI	TGATCA	1 cut(s)	514
BcnI	CCSGG	3 cut(s)	401, 466, 1351
BcoDI	GTCTC	3 cut(s)	331, 1307, 1421
BfoI	RGCGCY	2 cut(s)	878, 890
BglI	GCCNNNNNGGC	3 cut(s)	939, 1652, 1661
BisI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1470, 1610
BlpI	GCTNAGC	1 cut(s)	1535
BlsI	GCNGC	9 cut(s)	178, 586, 706, 941, 1011, 1217, 1393, 1471, 1611
Bme1390I	CCNGG	8 cut(s)	401, 466, 617, 784, 872, 1351, 1583, 1649
Bme18I	GGWCC	4 cut(s)	442, 993, 1483, 1579
BmgBI	CACGTC	3 cut(s)	913, 985, 1659
BmgT120I	GGNCC	8 cut(s)	442, 993, 1483, 1524, 1558, 1579, 1644, 1645
BmiI	GGNNCC	4 cut(s)	1484, 1485, 1595, 1646
BmrFI	CCNGG	8 cut(s)	401, 466, 617, 784, 872, 1351, 1583, 1649
BmrI	ACTGGG	4 cut(s)	164, 292, 1072, 1555
BmsI	GCATC	2 cut(s)	117, 1023
BmuI	ACTGGG	4 cut(s)	164, 292, 1072, 1555
BplI	GAGNNNNNCTC	6 cut(s)	122, 154, 1130, 1162, 1349, 1381
BpmI	CTGGAG	3 cut(s)	680, 713, 1376
Bpu10I	CCTNAGC	3 cut(s)	621, 1086, 1220
Bpu1102I	GCTNAGC	1 cut(s)	1535
BpuEI	CTTGAG	1 cut(s)	1079
BpuMI	CCSGG	3 cut(s)	401, 466, 1351
BsaAI	YACGTR	1 cut(s)	1600
BsaHI	GRCGYC	2 cut(s)	213, 1325
BsaI	GGTCTC	1 cut(s)	331
BsaJI	CCNNGG	8 cut(s)	465, 534, 585, 934, 1020, 1278, 1527, 1647
BsaWI	WCCGGW	1 cut(s)	763
BsaXI	ACNNNNNCTCC	2 cut(s)	764, 794
Bsc4I	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1546, 1588
Bse118I	RCCGGY	2 cut(s)	636, 1003
Bse1I	ACTGG	7 cut(s)	170, 287, 730, 943, 1078, 1540, 1561
BseBI	CCWGG	5 cut(s)	617, 784, 872, 1583, 1649
BseDI	CCNNGG	8 cut(s)	465, 534, 585, 934, 1020, 1278, 1527, 1647
BseGI	GGATG	1 cut(s)	1257
BseLI	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1546, 1588
BseMII	CTCAG	7 cut(s)	326, 398, 635, 780, 1100, 1234, 1526
BseNI	ACTGG	7 cut(s)	170, 287, 730, 943, 1078, 1540, 1561
BseRI	GAGGAG	7 cut(s)	466, 584, 728, 769, 869, 1049, 1492
BseSI	GKGCMC	1 cut(s)	1648
BseX3I	CGGCCG	1 cut(s)	177
BseXI	GCAGC	2 cut(s)	996, 1481
BseYI	CCCAGC	2 cut(s)	164, 435
BsgI	GTGCAG	1 cut(s)	1418
Bsh1236I	CGCG	8 cut(s)	106, 587, 1022, 1242, 1244, 1266, 1391, 1514
Bsh1285I	CGRYCG	3 cut(s)	180, 637, 1026
BshFI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1526, 1559, 1646, 1655
BsiEI	CGRYCG	3 cut(s)	180, 637, 1026
BsiHKAI	GWGCWC	2 cut(s)	612, 969
BsiSI	CCGG	8 cut(s)	401, 465, 637, 764, 1004, 1031, 1261, 1350
BslFI	GGGAC	3 cut(s)	718, 1060, 1469
BslI	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1546, 1588
BsmAI	GTCTC	3 cut(s)	331, 1307, 1421
BsmBI	CGTCTC	2 cut(s)	1307, 1421
BsmFI	GGGAC	3 cut(s)	718, 1060, 1469
BsnI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1526, 1559, 1646, 1655
Bso31I	GGTCTC	1 cut(s)	331
Bsp120I	GGGCCC	1 cut(s)	1644
Bsp1286I	GDGCHC	3 cut(s)	612, 969, 1648
Bsp143I	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
Bsp1720I	GCTNAGC	1 cut(s)	1535
BspANI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1526, 1559, 1646, 1655
BspCNI	CTCAG	7 cut(s)	327, 397, 634, 781, 1099, 1233, 1527
BspFNI	CGCG	8 cut(s)	106, 587, 1022, 1242, 1244, 1266, 1391, 1514
BspHI	TCATGA	1 cut(s)	294
BspLI	GGNNCC	4 cut(s)	1484, 1485, 1595, 1646
BspPI	GGATC	4 cut(s)	273, 422, 571, 622
BspTNI	GGTCTC	1 cut(s)	331
BsrFI	RCCGGY	2 cut(s)	636, 1003
BsrI	ACTGG	7 cut(s)	170, 287, 730, 943, 1078, 1540, 1561
BssAI	RCCGGY	2 cut(s)	636, 1003
BssECI	CCNNGG	8 cut(s)	465, 534, 585, 934, 1020, 1278, 1527, 1647
BssMI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
BssNI	GRCGYC	2 cut(s)	213, 1325
Bst2UI	CCWGG	5 cut(s)	617, 784, 872, 1583, 1649
Bst4CI	ACNGT	2 cut(s)	593, 1279
Bst6I	CTCTTC	1 cut(s)	417
BstACI	GRCGYC	2 cut(s)	213, 1325
BstBAI	YACGTR	1 cut(s)	1600
BstC8I	GCNNGC	8 cut(s)	311, 380, 702, 969, 1055, 1308, 1614, 1634
BstDEI	CTNAG	7 cut(s)	335, 384, 621, 789, 1086, 1220, 1535
BstDSI	CCRYGG	4 cut(s)	585, 1020, 1278, 1527
BstENI	CCTNNNNNAGG	1 cut(s)	620
BstF5I	GGATG	1 cut(s)	1257
BstFNI	CGCG	8 cut(s)	106, 587, 1022, 1242, 1244, 1266, 1391, 1514
BstH2I	RGCGCY	2 cut(s)	878, 890
BstHHI	GCGC	8 cut(s)	108, 877, 889, 1014, 1215, 1244, 1266, 1514
BstKTI	GATC	9 cut(s)	268, 430, 517, 579, 630, 1101, 1161, 1425, 1452
BstMAI	GTCTC	3 cut(s)	331, 1307, 1421
BstMBI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
BstMCI	CGRYCG	3 cut(s)	180, 637, 1026
BstNI	CCWGG	5 cut(s)	617, 784, 872, 1583, 1649
BstSCI	CCNGG	8 cut(s)	399, 464, 615, 782, 870, 1349, 1581, 1647
BstSLI	GKGCMC	1 cut(s)	1648
BstUI	CGCG	8 cut(s)	106, 587, 1022, 1242, 1244, 1266, 1391, 1514
BstV1I	GCAGC	2 cut(s)	996, 1481
BstX2I	RGATCY	1 cut(s)	265
BstXI	CCANNNNNNTGG	2 cut(s)	172, 439
BstYI	RGATCY	1 cut(s)	265
BstZI	CGGCCG	1 cut(s)	177
BsuRI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1526, 1559, 1646, 1655
BtgI	CCRYGG	4 cut(s)	585, 1020, 1278, 1527
BtrI	CACGTC	3 cut(s)	913, 985, 1659
BtsCI	GGATG	1 cut(s)	1257
BtsI	GCAGTG	1 cut(s)	1496
BtsIMutI	CAGTG	3 cut(s)	177, 1496, 1568
Cac8I	GCNNGC	8 cut(s)	311, 380, 702, 969, 1055, 1308, 1614, 1634
CciI	TCATGA	1 cut(s)	294
CfoI	GCGC	8 cut(s)	108, 877, 889, 1014, 1215, 1244, 1266, 1514
Cfr10I	RCCGGY	2 cut(s)	636, 1003
Cfr13I	GGNCC	8 cut(s)	442, 993, 1483, 1524, 1558, 1579, 1644, 1645
Cfr42I	CCGCGG	2 cut(s)	588, 1023
CseI	GACGC	2 cut(s)	731, 1397
Csp6I	GTAC	5 cut(s)	8, 406, 946, 1039, 1204
CviAII	CATG	6 cut(s)	236, 295, 1168, 1210, 1637, 1665
CviQI	GTAC	5 cut(s)	8, 406, 946, 1039, 1204
DdeI	CTNAG	7 cut(s)	335, 384, 621, 789, 1086, 1220, 1535
DpnI	GATC	9 cut(s)	267, 429, 516, 578, 629, 1100, 1160, 1424, 1451
DpnII	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
DrdI	GACNNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	323
EaeI	YGGCCR	4 cut(s)	177, 940, 1308, 1653
EagI	CGGCCG	1 cut(s)	177
Eam1104I	CTCTTC	1 cut(s)	417
EarI	CTCTTC	1 cut(s)	417
EciI	GGCGGA	3 cut(s)	143, 1216, 1631
Ecl136II	GAGCTC	2 cut(s)	610, 967
EclXI	CGGCCG	1 cut(s)	177
Eco24I	GRGCYC	3 cut(s)	612, 969, 1648
Eco31I	GGTCTC	1 cut(s)	331
Eco47I	GGWCC	4 cut(s)	442, 993, 1483, 1579
Eco47III	AGCGCT	1 cut(s)	888
Eco52I	CGGCCG	1 cut(s)	177
Eco53kI	GAGCTC	2 cut(s)	610, 967
Eco57I	CTGAAG	1 cut(s)	883
Eco72I	CACGTG	1 cut(s)	1600
EcoICRI	GAGCTC	2 cut(s)	610, 967
EcoNI	CCTNNNNNAGG	1 cut(s)	620
EcoO109I	RGGNCCY	3 cut(s)	1483, 1644, 1645
EcoRI	GAATTC	1 cut(s)	1115
EcoRII	CCWGG	5 cut(s)	615, 782, 870, 1581, 1647
EcoT38I	GRGCYC	3 cut(s)	612, 969, 1648
Esp3I	CGTCTC	2 cut(s)	1307, 1421
FaeI	CATG	6 cut(s)	239, 298, 1171, 1213, 1640, 1668
FaiI	YATR	8 cut(s)	237, 296, 511, 513, 1169, 1211, 1638, 1666
FaqI	GGGAC	3 cut(s)	718, 1060, 1469
FatI	CATG	6 cut(s)	235, 294, 1167, 1209, 1636, 1664
FauI	CCCGC	5 cut(s)	1008, 1465, 1488, 1494, 1507
FauNDI	CATATG	1 cut(s)	511
FbaI	TGATCA	1 cut(s)	514
FblI	GTMKAC	2 cut(s)	471, 1293
Fnu4HI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1470, 1610
FokI	GGATG	1 cut(s)	1244
FriOI	GRGCYC	3 cut(s)	612, 969, 1648
Fsp4HI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1470, 1610
FspI	TGCGCA	1 cut(s)	1013
GlaI	GCGC	8 cut(s)	107, 876, 888, 1013, 1214, 1243, 1265, 1513
GluI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1470, 1610
GsaI	CCCAGC	2 cut(s)	168, 439
GsuI	CTGGAG	3 cut(s)	680, 713, 1376
HaeII	RGCGCY	2 cut(s)	878, 890
HaeIII	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1526, 1559, 1646, 1655
HapII	CCGG	8 cut(s)	401, 465, 637, 764, 1004, 1031, 1261, 1350
HgaI	GACGC	2 cut(s)	731, 1397
HhaI	GCGC	8 cut(s)	108, 877, 889, 1014, 1215, 1244, 1266, 1514
Hin1I	GRCGYC	2 cut(s)	213, 1325
Hin1II	CATG	6 cut(s)	239, 298, 1171, 1213, 1640, 1668
Hin6I	GCGC	8 cut(s)	106, 875, 887, 1012, 1213, 1242, 1264, 1512
HinP1I	GCGC	8 cut(s)	106, 875, 887, 1012, 1213, 1242, 1264, 1512
HincII	GTYRAC	1 cut(s)	1294
HindII	GTYRAC	1 cut(s)	1294
HpaII	CCGG	8 cut(s)	401, 465, 637, 764, 1004, 1031, 1261, 1350
HphI	GGTGA	7 cut(s)	215, 224, 550, 637, 1009, 1072, 1426
Hpy166II	GTNNAC	5 cut(s)	445, 472, 541, 910, 1294
Hpy8I	GTNNAC	5 cut(s)	445, 472, 541, 910, 1294
Hpy99I	CGWCG	8 cut(s)	215, 320, 1049, 1295, 1298, 1327, 1330, 1663
HpyAV	CCTTC	8 cut(s)	111, 198, 433, 516, 1130, 1144, 1159, 1166
HpyCH4III	ACNGT	2 cut(s)	593, 1279
HpyCH4V	TGCA	2 cut(s)	313, 1399
HpyF3I	CTNAG	7 cut(s)	335, 384, 621, 789, 1086, 1220, 1535
Hsp92I	GRCGYC	2 cut(s)	213, 1325
Hsp92II	CATG	6 cut(s)	239, 298, 1171, 1213, 1640, 1668
HspAI	GCGC	8 cut(s)	106, 875, 887, 1012, 1213, 1242, 1264, 1512
KflI	GGGWCCC	1 cut(s)	1483
Ksp22I	TGATCA	1 cut(s)	514
KspI	CCGCGG	2 cut(s)	588, 1023
Kzo9I	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
LmnI	GCTCC	6 cut(s)	571, 882, 1229, 1319, 1531, 1618
Lsp1109I	GCAGC	2 cut(s)	996, 1481
LweI	GCATC	2 cut(s)	117, 1023
MaeIII	GTNAC	1 cut(s)	13
MalI	GATC	9 cut(s)	267, 429, 516, 578, 629, 1100, 1160, 1424, 1451
MboI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
MboII	GAAGA	5 cut(s)	260, 404, 1354, 1432, 1459
MflI	RGATCY	1 cut(s)	265
MhlI	GDGCHC	3 cut(s)	612, 969, 1648
MlsI	TGGCCA	1 cut(s)	1655
MluCI	AATT	2 cut(s)	484, 1115
MluNI	TGGCCA	1 cut(s)	1655
MlyI	GAGTC	4 cut(s)	214, 314, 593, 1388
MmeI	TCCRAC	4 cut(s)	234, 474, 570, 1020
Mox20I	TGGCCA	1 cut(s)	1655
MroXI	GAANNNNTTC	2 cut(s)	1119, 1503
MscI	TGGCCA	1 cut(s)	1655
MseI	TTAA	1 cut(s)	330
MslI	CAYNNNNRTG	1 cut(s)	1669
Msp20I	TGGCCA	1 cut(s)	1655
MspA1I	CMGCKG	5 cut(s)	358, 439, 587, 1022, 1472
MspI	CCGG	8 cut(s)	401, 465, 637, 764, 1004, 1031, 1261, 1350
MspR9I	CCNGG	8 cut(s)	401, 466, 617, 784, 872, 1351, 1583, 1649
MvaI	CCWGG	5 cut(s)	617, 784, 872, 1583, 1649
MvnI	CGCG	8 cut(s)	106, 587, 1022, 1242, 1244, 1266, 1391, 1514
NciI	CCSGG	3 cut(s)	401, 466, 1351
NdeI	CATATG	1 cut(s)	511
NdeII	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
NlaIII	CATG	6 cut(s)	239, 298, 1171, 1213, 1640, 1668
NlaIV	GGNNCC	4 cut(s)	1484, 1485, 1595, 1646
NmeAIII	GCCGAG	5 cut(s)	915, 997, 1230, 1255, 1336
NsbI	TGCGCA	1 cut(s)	1013
PagI	TCATGA	1 cut(s)	294
PcsI	WCGNNNNNNNCGW	6 cut(s)	252, 555, 564, 603, 842, 1322
PdmI	GAANNNNTTC	2 cut(s)	1119, 1503
PfeI	GAWTC	7 cut(s)	90, 229, 287, 388, 1104, 1141, 1189
PflFI	GACNNNGTC	1 cut(s)	323
PfoI	TCCNGGA	1 cut(s)	399
PkrI	GCNGC	9 cut(s)	178, 586, 706, 941, 1011, 1217, 1393, 1471, 1611
PleI	GAGTC	4 cut(s)	214, 314, 593, 1387
PmaCI	CACGTG	1 cut(s)	1600
PmlI	CACGTG	1 cut(s)	1600
PpsI	GAGTC	4 cut(s)	214, 314, 593, 1387
Ppu21I	YACGTR	1 cut(s)	1600
PpuMI	RGGWCCY	1 cut(s)	1483
Psp124BI	GAGCTC	2 cut(s)	612, 969
Psp5II	RGGWCCY	1 cut(s)	1483
Psp6I	CCWGG	5 cut(s)	615, 782, 870, 1581, 1647
PspCI	CACGTG	1 cut(s)	1600
PspFI	CCCAGC	2 cut(s)	164, 435
PspGI	CCWGG	5 cut(s)	615, 782, 870, 1581, 1647
PspN4I	GGNNCC	4 cut(s)	1484, 1485, 1595, 1646
PspOMI	GGGCCC	1 cut(s)	1644
PspPI	GGNCC	8 cut(s)	442, 993, 1483, 1524, 1558, 1579, 1644, 1645
PspPPI	RGGWCCY	1 cut(s)	1483
PsuI	RGATCY	1 cut(s)	265
PsyI	GACNNNGTC	1 cut(s)	323
PvuII	CAGCTG	2 cut(s)	358, 439
RsaI	GTAC	5 cut(s)	9, 407, 947, 1040, 1205
RsaNI	GTAC	5 cut(s)	8, 406, 946, 1039, 1204
RseI	CAYNNNNRTG	1 cut(s)	1669
SacI	GAGCTC	2 cut(s)	612, 969
SacII	CCGCGG	2 cut(s)	588, 1023
SalI	GTCGAC	1 cut(s)	1292
SaqAI	TTAA	1 cut(s)	330
SatI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1470, 1610
Sau3AI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
Sau96I	GGNCC	8 cut(s)	442, 993, 1483, 1524, 1558, 1579, 1644, 1645
SchI	GAGTC	4 cut(s)	214, 314, 593, 1388
ScrFI	CCNGG	8 cut(s)	401, 466, 617, 784, 872, 1351, 1583, 1649
SduI	GDGCHC	3 cut(s)	612, 969, 1648
SfaNI	GCATC	2 cut(s)	117, 1023
SfiI	GGCCNNNNNGGCC	2 cut(s)	939, 1652
Sfr303I	CCGCGG	2 cut(s)	588, 1023
SgrAI	CRCCGGYG	1 cut(s)	1003
SgrBI	CCGCGG	2 cut(s)	588, 1023
SgrDI	CGTCGACG	1 cut(s)	1292
SinI	GGWCC	4 cut(s)	442, 993, 1483, 1579
SmiMI	CAYNNNNRTG	1 cut(s)	1669
SmlI	CTYRAG	1 cut(s)	1094
SmoI	CTYRAG	1 cut(s)	1094
Sse9I	AATT	2 cut(s)	484, 1115
SstI	GAGCTC	2 cut(s)	612, 969
StyD4I	CCNGG	8 cut(s)	399, 464, 615, 782, 870, 1349, 1581, 1647
TaaI	ACNGT	2 cut(s)	593, 1279
TaqII	GACCGA	1 cut(s)	536
TasI	AATT	2 cut(s)	484, 1115
TauI	GCSGC	7 cut(s)	179, 587, 707, 942, 1218, 1394, 1612
TfiI	GAWTC	7 cut(s)	90, 229, 287, 388, 1104, 1141, 1189
Tru1I	TTAA	1 cut(s)	330
Tru9I	TTAA	1 cut(s)	330
TscAI	CASTG	3 cut(s)	177, 1496, 1568
TseI	GCWGC	2 cut(s)	1009, 1469
TspDTI	ATGAA	5 cut(s)	498, 518, 553, 974, 1156
TspGWI	ACGGA	2 cut(s)	130, 1311
TspRI	CASTG	3 cut(s)	177, 1496, 1568
Tth111I	GACNNNGTC	1 cut(s)	323
VpaK11BI	GGWCC	4 cut(s)	442, 993, 1483, 1579
XagI	CCTNNNNNAGG	1 cut(s)	620
XapI	RAATTY	2 cut(s)	484, 1115
XmiI	GTMKAC	2 cut(s)	471, 1293
XmnI	GAANNNNTTC	2 cut(s)	1119, 1503
ZraI	GACGTC	2 cut(s)	214, 1326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.