Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0014425

Physical Location & Seq

Genomic Coordinates Forward (+)

12168773 .. 12170448

Gene Structure 1676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G011960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGAGAGTACCCGTTACCACACCCCAAACCAACAACAACAACAACAACAGCAACCAATCTCCAAACCCTAAACCCGAAACCAATCTCGGATTCCACACTCCTTCGCGCATCAATCCAAACCTCTGCTACGAGCCAACCTCCGTTCTCGACCTCCGCCACAGCCCCAGCCCAGTGGCGGCCGATAAGCAGTCAAAAGTTTCAGCTATCTCCGACGTCCTGACTCACCCGAATCACCATGAGCCTCTCGAGTGGGTCGACGAGCAGGATCTTCACAACTTGGACTGGGACTCCCTCATGAGAGACTTGGGCTTGCACGACGACTCTGTCCTTAACCTGAGACCTACTACTAATACACAGCTGAACCCCCACCCCAACAGCGAGCCTCAGATTCCTCATCTCCCGGAGTACCCTCTTCCACAGCCCTTCGATCCCACCCAGCTGGTCCACTCCGACTTCAACCTCTCCGGGGTCTACTCCTCCCAGAATTTCAGCCACCACAATCTGCCTTCGTATGATCAGACCGATATTCATTCCTCGGTGAACTCCAACGTGGGGTTCGATTTCATCGAGGAGCTGATCCGAGCCGCGGACTGTTTCGACTCTGACGAGCTCAACCTGGCTCAGGTGATCCTCGACCGGCTCAACCAACGTCAGCGATTGTCCTCTCCCAACCCAAAACCTCTTGGAAAACCTCTCCAGCGAGCCGCGGTTTATTTCAAAGACGCTCTCCAGTCCCTCCTCAACAACTCCACCGGTTCAAGTCCGGTTCGCAACCTCTCCTCCTGGTCTGAGATTGTCCAGACCATCAGAGCCTACAAGGGCTTTTCGGGGATTTCGCCTATCCCGATGTTCTCGCACTTCACAACTAACCAGGCGCTCCTCGAAGCGCTCAACGGCTCCAGCTTCGTCCACGTCATCGACTTCGACATCGGCCTCGGCGGCCAGTACGCTTCGCTGATGAAAGAGCTCGCCGAGAAAGCTGACGTGTCGAGGTCCAACCCGCCGGTGCTGCGCATCACCGCCGTCGTGCCGGAGGAGTACGCCGTCGAGAGCAGGCTGGTGAGAGAGAACTTGTCCCAGTTCGCTCAGGAACTCAAGATCAGATTCCAAATCGAATTCCTTCTCGTCCGAACCTTCGAGATTCTCTCCTTCAAGGCGATCAAGTTCATGGAAGGAGAGAAAACGGCGATTCTGCTGTCGCCGTACATCATGCGCCGCCTCAGCTCCACCGAGAACGTCCGCGCGTTTCTCGGTGACATCCGGCGTGTGTCGCCTACTGTGGTGGTGTTCGTCGACGGCGAGGGGCTGGCCGAGACGGGAGCGACGTCGTTCAGGAGGAACTTCGTGTCCGGGCTGGAGTTCTTCTCGATTGTTTTGGAGTCGCTGGACGCGGCGGTGCCGGGTGGCGAGATGGTGAGGAAGATCGAGACGTTTCTATTGAGGCCGAAGATCGAGGCGGCGTGGCGGGAAGTGTTTCACGGCGCGGGAATGAGGGCCGTGGAGCTGAGCCAGTTTGCGGACTTTCAGGCCCAGTGCTTGTTGGGCAAGGTCCAGGTCAGGGGGTTCCACGTGGCGAAGCGGCAGGCGGAGCTGGTGCTGTGCTGGCATGATAGGGCCCTGGTGGCCACGTCGGCATGGAGGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0048831 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

548

Amino Acids

61.45

Weight (kDa)

5.85

Isoelectric Point (pI)

44.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	190 - 547	1.3e-90	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014425)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36710
fragaria_vesca	FvH4_1g13740
malus_domestica	MD02G1152200.v1.1 MD15G1266500.v1.1
prunus_persica	Prupe.7G150900_v2.0.a1
pyrus_communis	pycom02g11950
rosa_chinensis	RchiOBHm_Chr2g0102171
rosa_laevigata	RLG00000017134
rosa_multiflora	Rmu_co8491613.1_g000001 Rmu_sc0000157.1_g000043
rosa_roxburghii	Rroxscaffold_2G00140730
rosa_rugosa	Rorug02G0104800
rosa_samantha	Rh2AG153200 Rh2BG159100 Rh2CG158600 Rh2DG158800
rosa_wichuraiana	Rw2G011960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	323
AatII	GACGTC	2 cut(s)	216, 1328
Acc16I	TGCGCA	1 cut(s)	1013
AccB1I	GGYRCC	1 cut(s)	1396
AccI	GTMKAC	3 cut(s)	255, 471, 1293
AccII	CGCG	7 cut(s)	106, 587, 707, 1242, 1244, 1391, 1484
AclWI	GGATC	4 cut(s)	273, 422, 571, 622
AcoI	YGGCCR	4 cut(s)	177, 940, 1308, 1623
AcsI	RAATTY	2 cut(s)	484, 1115
AcvI	CACGTG	1 cut(s)	1570
AcyI	GRCGYC	2 cut(s)	213, 1325
AfaI	GTAC	5 cut(s)	9, 407, 947, 1040, 1205
AfeI	AGCGCT	1 cut(s)	888
AfiI	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1516, 1558
AflIII	ACRYGT	1 cut(s)	984
AgeI	ACCGGT	1 cut(s)	752
AgsI	TTSAA	4 cut(s)	457, 718, 759, 1153
AjiI	CACGTC	3 cut(s)	913, 985, 1629
AjnI	CCWGG	5 cut(s)	615, 782, 870, 1551, 1617
AjuI	GAANNNNNNNTTGG	4 cut(s)	74, 106, 539, 571
AloI	GAACNNNNNNTCC	2 cut(s)	1331, 1363
Alw21I	GWGCWC	2 cut(s)	612, 969
Alw26I	GTCTC	4 cut(s)	294, 331, 1307, 1421
AlwI	GGATC	4 cut(s)	273, 422, 571, 622
Ama87I	CYCGRG	1 cut(s)	245
Aor51HI	AGCGCT	1 cut(s)	888
AoxI	GGCC	9 cut(s)	177, 931, 940, 1308, 1442, 1494, 1527, 1614, 1623
ApaI	GGGCCC	1 cut(s)	1618
ApeKI	GCWGC	1 cut(s)	1009
ApoI	RAATTY	2 cut(s)	484, 1115
AsiGI	ACCGGT	1 cut(s)	752
Asp700I	GAANNNNTTC	2 cut(s)	1119, 1473
AspLEI	GCGC	7 cut(s)	108, 877, 889, 1014, 1215, 1244, 1484
AspS9I	GGNCC	7 cut(s)	442, 993, 1494, 1528, 1549, 1614, 1615
AsuC2I	CCSGG	4 cut(s)	401, 466, 1351, 1401
AsuHPI	GGTGA	8 cut(s)	215, 224, 550, 637, 1009, 1072, 1265, 1426
AvaI	CYCGRG	1 cut(s)	245
AvaII	GGWCC	3 cut(s)	442, 993, 1549
BaeGI	GKGCMC	1 cut(s)	1618
BalI	TGGCCA	1 cut(s)	1625
BanI	GGYRCC	1 cut(s)	1396
BanII	GRGCYC	3 cut(s)	612, 969, 1618
BbrPI	CACGTG	1 cut(s)	1570
Bbv12I	GWGCWC	2 cut(s)	612, 969
BbvCI	CCTCAGC	1 cut(s)	1220
BbvI	GCAGC	1 cut(s)	996
BccI	CCATC	2 cut(s)	812, 1405
BceAI	ACGGC	8 cut(s)	910, 1007, 1028, 1186, 1200, 1312, 1481, 1495
BciT130I	CCWGG	5 cut(s)	617, 784, 872, 1553, 1619
BclI	TGATCA	1 cut(s)	514
BcnI	CCSGG	4 cut(s)	401, 466, 1351, 1401
BcoDI	GTCTC	4 cut(s)	294, 331, 1307, 1421
BfoI	RGCGCY	2 cut(s)	878, 890
BglI	GCCNNNNNGGC	3 cut(s)	939, 1622, 1631
BisI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1458, 1580
BlpI	GCTNAGC	1 cut(s)	1505
BlsI	GCNGC	9 cut(s)	178, 586, 706, 941, 1011, 1217, 1393, 1459, 1581
Bme1390I	CCNGG	9 cut(s)	401, 466, 617, 784, 872, 1351, 1401, 1553, 1619
Bme18I	GGWCC	3 cut(s)	442, 993, 1549
BmeT110I	CYCGRG	1 cut(s)	245
BmgBI	CACGTC	3 cut(s)	913, 985, 1629
BmgT120I	GGNCC	7 cut(s)	442, 993, 1494, 1528, 1549, 1614, 1615
BmiI	GGNNCC	4 cut(s)	898, 1398, 1565, 1616
BmrFI	CCNGG	9 cut(s)	401, 466, 617, 784, 872, 1351, 1401, 1553, 1619
BmrI	ACTGGG	4 cut(s)	164, 292, 1072, 1525
BmsI	GCATC	2 cut(s)	117, 1023
BmuI	ACTGGG	4 cut(s)	164, 292, 1072, 1525
BplI	GAGNNNNNCTC	6 cut(s)	122, 154, 1130, 1162, 1349, 1381
BpmI	CTGGAG	4 cut(s)	680, 713, 883, 1376
Bpu10I	CCTNAGC	3 cut(s)	621, 1086, 1220
Bpu1102I	GCTNAGC	1 cut(s)	1505
BpuEI	CTTGAG	1 cut(s)	1079
BpuMI	CCSGG	4 cut(s)	401, 466, 1351, 1401
BsaAI	YACGTR	1 cut(s)	1570
BsaHI	GRCGYC	2 cut(s)	213, 1325
BsaI	GGTCTC	1 cut(s)	331
BsaJI	CCNNGG	7 cut(s)	465, 534, 585, 705, 934, 1497, 1617
BsaWI	WCCGGW	2 cut(s)	752, 763
BsaXI	ACNNNNNCTCC	4 cut(s)	272, 302, 764, 794
Bsc4I	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1516, 1558
Bse118I	RCCGGY	3 cut(s)	636, 752, 1003
Bse1I	ACTGG	7 cut(s)	170, 287, 730, 943, 1078, 1510, 1531
BseBI	CCWGG	5 cut(s)	617, 784, 872, 1553, 1619
BseDI	CCNNGG	7 cut(s)	465, 534, 585, 705, 934, 1497, 1617
BseGI	GGATG	1 cut(s)	1257
BseLI	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1516, 1558
BseMII	CTCAG	7 cut(s)	326, 398, 635, 780, 1100, 1234, 1496
BseNI	ACTGG	7 cut(s)	170, 287, 730, 943, 1078, 1510, 1531
BseRI	GAGGAG	6 cut(s)	466, 584, 728, 769, 869, 1049
BseSI	GKGCMC	1 cut(s)	1618
BseX3I	CGGCCG	1 cut(s)	177
BseXI	GCAGC	1 cut(s)	996
BseYI	CCCAGC	2 cut(s)	164, 435
Bsh1236I	CGCG	7 cut(s)	106, 587, 707, 1242, 1244, 1391, 1484
Bsh1285I	CGRYCG	2 cut(s)	180, 637
BshFI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1496, 1529, 1616, 1625
BshNI	GGYRCC	1 cut(s)	1396
BshTI	ACCGGT	1 cut(s)	752
BsiEI	CGRYCG	2 cut(s)	180, 637
BsiHKAI	GWGCWC	2 cut(s)	612, 969
BsiHKCI	CYCGRG	1 cut(s)	245
BslFI	GGGAC	3 cut(s)	299, 718, 1060
BslI	CCNNNNNNNGG	7 cut(s)	175, 466, 552, 586, 622, 1516, 1558
BsmAI	GTCTC	4 cut(s)	294, 331, 1307, 1421
BsmBI	CGTCTC	2 cut(s)	1307, 1421
BsmFI	GGGAC	3 cut(s)	299, 718, 1060
BsnI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1496, 1529, 1616, 1625
Bso31I	GGTCTC	1 cut(s)	331
BsoBI	CYCGRG	1 cut(s)	245
Bsp120I	GGGCCC	1 cut(s)	1614
Bsp1286I	GDGCHC	3 cut(s)	612, 969, 1618
Bsp143I	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
Bsp1720I	GCTNAGC	1 cut(s)	1505
BspANI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1496, 1529, 1616, 1625
BspCNI	CTCAG	7 cut(s)	327, 397, 634, 781, 1099, 1233, 1497
BspFNI	CGCG	7 cut(s)	106, 587, 707, 1242, 1244, 1391, 1484
BspHI	TCATGA	1 cut(s)	294
BspLI	GGNNCC	4 cut(s)	898, 1398, 1565, 1616
BspPI	GGATC	4 cut(s)	273, 422, 571, 622
BspT107I	GGYRCC	1 cut(s)	1396
BspTNI	GGTCTC	1 cut(s)	331
BsrFI	RCCGGY	3 cut(s)	636, 752, 1003
BsrI	ACTGG	7 cut(s)	170, 287, 730, 943, 1078, 1510, 1531
BssAI	RCCGGY	3 cut(s)	636, 752, 1003
BssECI	CCNNGG	7 cut(s)	465, 534, 585, 705, 934, 1497, 1617
BssMI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
BssNI	GRCGYC	2 cut(s)	213, 1325
Bst2UI	CCWGG	5 cut(s)	617, 784, 872, 1553, 1619
Bst4CI	ACNGT	2 cut(s)	593, 1279
Bst6I	CTCTTC	1 cut(s)	417
BstACI	GRCGYC	2 cut(s)	213, 1325
BstBAI	YACGTR	1 cut(s)	1570
BstC8I	GCNNGC	8 cut(s)	311, 380, 702, 969, 1055, 1308, 1584, 1604
BstDEI	CTNAG	7 cut(s)	335, 384, 621, 789, 1086, 1220, 1505
BstDSI	CCRYGG	3 cut(s)	585, 705, 1497
BstENI	CCTNNNNNAGG	1 cut(s)	620
BstF5I	GGATG	1 cut(s)	1257
BstFNI	CGCG	7 cut(s)	106, 587, 707, 1242, 1244, 1391, 1484
BstH2I	RGCGCY	2 cut(s)	878, 890
BstHHI	GCGC	7 cut(s)	108, 877, 889, 1014, 1215, 1244, 1484
BstKTI	GATC	9 cut(s)	268, 430, 517, 579, 630, 1101, 1161, 1425, 1452
BstMAI	GTCTC	4 cut(s)	294, 331, 1307, 1421
BstMBI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
BstMCI	CGRYCG	2 cut(s)	180, 637
BstNI	CCWGG	5 cut(s)	617, 784, 872, 1553, 1619
BstSCI	CCNGG	9 cut(s)	399, 464, 615, 782, 870, 1349, 1399, 1551, 1617
BstSLI	GKGCMC	1 cut(s)	1618
BstUI	CGCG	7 cut(s)	106, 587, 707, 1242, 1244, 1391, 1484
BstV1I	GCAGC	1 cut(s)	996
BstX2I	RGATCY	1 cut(s)	265
BstXI	CCANNNNNNTGG	2 cut(s)	172, 439
BstYI	RGATCY	1 cut(s)	265
BstZI	CGGCCG	1 cut(s)	177
BsuRI	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1496, 1529, 1616, 1625
BtgI	CCRYGG	3 cut(s)	585, 705, 1497
BtrI	CACGTC	3 cut(s)	913, 985, 1629
BtsCI	GGATG	1 cut(s)	1257
BtsIMutI	CAGTG	2 cut(s)	177, 1538
Cac8I	GCNNGC	8 cut(s)	311, 380, 702, 969, 1055, 1308, 1584, 1604
CciI	TCATGA	1 cut(s)	294
CfoI	GCGC	7 cut(s)	108, 877, 889, 1014, 1215, 1244, 1484
Cfr10I	RCCGGY	3 cut(s)	636, 752, 1003
Cfr13I	GGNCC	7 cut(s)	442, 993, 1494, 1528, 1549, 1614, 1615
Cfr42I	CCGCGG	2 cut(s)	588, 708
CseI	GACGC	2 cut(s)	731, 1397
Csp6I	GTAC	5 cut(s)	8, 406, 946, 1039, 1204
CspAI	ACCGGT	1 cut(s)	752
CviAII	CATG	6 cut(s)	236, 295, 1168, 1210, 1607, 1635
CviQI	GTAC	5 cut(s)	8, 406, 946, 1039, 1204
DdeI	CTNAG	7 cut(s)	335, 384, 621, 789, 1086, 1220, 1505
DpnI	GATC	9 cut(s)	267, 429, 516, 578, 629, 1100, 1160, 1424, 1451
DpnII	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
DrdI	GACNNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	323
EaeI	YGGCCR	4 cut(s)	177, 940, 1308, 1623
EagI	CGGCCG	1 cut(s)	177
Eam1104I	CTCTTC	1 cut(s)	417
EarI	CTCTTC	1 cut(s)	417
EciI	GGCGGA	2 cut(s)	143, 1601
Ecl136II	GAGCTC	2 cut(s)	610, 967
EclXI	CGGCCG	1 cut(s)	177
Eco24I	GRGCYC	3 cut(s)	612, 969, 1618
Eco31I	GGTCTC	1 cut(s)	331
Eco47I	GGWCC	3 cut(s)	442, 993, 1549
Eco47III	AGCGCT	1 cut(s)	888
Eco52I	CGGCCG	1 cut(s)	177
Eco53kI	GAGCTC	2 cut(s)	610, 967
Eco72I	CACGTG	1 cut(s)	1570
Eco88I	CYCGRG	1 cut(s)	245
EcoICRI	GAGCTC	2 cut(s)	610, 967
EcoNI	CCTNNNNNAGG	1 cut(s)	620
EcoO109I	RGGNCCY	2 cut(s)	1614, 1615
EcoRI	GAATTC	1 cut(s)	1115
EcoRII	CCWGG	5 cut(s)	615, 782, 870, 1551, 1617
EcoT38I	GRGCYC	3 cut(s)	612, 969, 1618
Esp3I	CGTCTC	2 cut(s)	1307, 1421
FaeI	CATG	6 cut(s)	239, 298, 1171, 1213, 1610, 1638
FaiI	YATR	7 cut(s)	237, 296, 513, 1169, 1211, 1608, 1636
FaqI	GGGAC	3 cut(s)	299, 718, 1060
FatI	CATG	6 cut(s)	235, 294, 1167, 1209, 1606, 1634
FauI	CCCGC	3 cut(s)	1008, 1458, 1477
FbaI	TGATCA	1 cut(s)	514
FblI	GTMKAC	3 cut(s)	255, 471, 1293
Fnu4HI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1458, 1580
FokI	GGATG	1 cut(s)	1244
FriOI	GRGCYC	3 cut(s)	612, 969, 1618
Fsp4HI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1458, 1580
FspI	TGCGCA	1 cut(s)	1013
GlaI	GCGC	7 cut(s)	107, 876, 888, 1013, 1214, 1243, 1483
GluI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1458, 1580
GsaI	CCCAGC	2 cut(s)	168, 439
GsuI	CTGGAG	4 cut(s)	680, 713, 883, 1376
HaeII	RGCGCY	2 cut(s)	878, 890
HaeIII	GGCC	9 cut(s)	179, 933, 942, 1310, 1444, 1496, 1529, 1616, 1625
HgaI	GACGC	2 cut(s)	731, 1397
HhaI	GCGC	7 cut(s)	108, 877, 889, 1014, 1215, 1244, 1484
Hin1I	GRCGYC	2 cut(s)	213, 1325
Hin1II	CATG	6 cut(s)	239, 298, 1171, 1213, 1610, 1638
Hin6I	GCGC	7 cut(s)	106, 875, 887, 1012, 1213, 1242, 1482
HinP1I	GCGC	7 cut(s)	106, 875, 887, 1012, 1213, 1242, 1482
HincII	GTYRAC	2 cut(s)	256, 1294
HindII	GTYRAC	2 cut(s)	256, 1294
HphI	GGTGA	8 cut(s)	215, 224, 550, 637, 1009, 1072, 1265, 1426
Hpy166II	GTNNAC	6 cut(s)	256, 445, 472, 541, 910, 1294
Hpy8I	GTNNAC	6 cut(s)	256, 445, 472, 541, 910, 1294
HpyAV	CCTTC	7 cut(s)	111, 433, 516, 1130, 1144, 1159, 1166
HpyCH4III	ACNGT	2 cut(s)	593, 1279
HpyCH4V	TGCA	1 cut(s)	313
HpyF3I	CTNAG	7 cut(s)	335, 384, 621, 789, 1086, 1220, 1505
Hsp92I	GRCGYC	2 cut(s)	213, 1325
Hsp92II	CATG	6 cut(s)	239, 298, 1171, 1213, 1610, 1638
HspAI	GCGC	7 cut(s)	106, 875, 887, 1012, 1213, 1242, 1482
Ksp22I	TGATCA	1 cut(s)	514
KspI	CCGCGG	2 cut(s)	588, 708
Kzo9I	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
LmnI	GCTCC	7 cut(s)	571, 882, 902, 1229, 1319, 1501, 1588
Lsp1109I	GCAGC	1 cut(s)	996
LweI	GCATC	2 cut(s)	117, 1023
MaeIII	GTNAC	2 cut(s)	13, 1253
MalI	GATC	9 cut(s)	267, 429, 516, 578, 629, 1100, 1160, 1424, 1451
MboI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
MboII	GAAGA	5 cut(s)	260, 404, 1354, 1432, 1459
MflI	RGATCY	1 cut(s)	265
MhlI	GDGCHC	3 cut(s)	612, 969, 1618
MlsI	TGGCCA	1 cut(s)	1625
MluCI	AATT	2 cut(s)	484, 1115
MluNI	TGGCCA	1 cut(s)	1625
MlyI	GAGTC	5 cut(s)	214, 281, 314, 593, 1388
MmeI	TCCRAC	4 cut(s)	234, 474, 570, 1020
Mox20I	TGGCCA	1 cut(s)	1625
MroXI	GAANNNNTTC	2 cut(s)	1119, 1473
MscI	TGGCCA	1 cut(s)	1625
MseI	TTAA	1 cut(s)	330
MslI	CAYNNNNRTG	1 cut(s)	1639
Msp20I	TGGCCA	1 cut(s)	1625
MspA1I	CMGCKG	4 cut(s)	358, 439, 587, 707
MspR9I	CCNGG	9 cut(s)	401, 466, 617, 784, 872, 1351, 1401, 1553, 1619
MvaI	CCWGG	5 cut(s)	617, 784, 872, 1553, 1619
MvnI	CGCG	7 cut(s)	106, 587, 707, 1242, 1244, 1391, 1484
NciI	CCSGG	4 cut(s)	401, 466, 1351, 1401
NdeII	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
NlaIII	CATG	6 cut(s)	239, 298, 1171, 1213, 1610, 1638
NlaIV	GGNNCC	4 cut(s)	898, 1398, 1565, 1616
NmeAIII	GCCGAG	3 cut(s)	915, 997, 1336
NmuCI	GTSAC	1 cut(s)	1253
NsbI	TGCGCA	1 cut(s)	1013
PaeR7I	CTCGAG	1 cut(s)	245
PagI	TCATGA	1 cut(s)	294
PcsI	WCGNNNNNNNCGW	7 cut(s)	252, 555, 564, 603, 842, 1296, 1322
PdmI	GAANNNNTTC	2 cut(s)	1119, 1473
PfeI	GAWTC	6 cut(s)	90, 229, 388, 1104, 1141, 1189
PflFI	GACNNNGTC	1 cut(s)	323
PfoI	TCCNGGA	1 cut(s)	399
PinAI	ACCGGT	1 cut(s)	752
PkrI	GCNGC	9 cut(s)	178, 586, 706, 941, 1011, 1217, 1393, 1459, 1581
PleI	GAGTC	5 cut(s)	214, 281, 314, 593, 1387
PmaCI	CACGTG	1 cut(s)	1570
PmlI	CACGTG	1 cut(s)	1570
PpsI	GAGTC	5 cut(s)	214, 281, 314, 593, 1387
Ppu21I	YACGTR	1 cut(s)	1570
Psp124BI	GAGCTC	2 cut(s)	612, 969
Psp6I	CCWGG	5 cut(s)	615, 782, 870, 1551, 1617
PspCI	CACGTG	1 cut(s)	1570
PspFI	CCCAGC	2 cut(s)	164, 435
PspGI	CCWGG	5 cut(s)	615, 782, 870, 1551, 1617
PspN4I	GGNNCC	4 cut(s)	898, 1398, 1565, 1616
PspOMI	GGGCCC	1 cut(s)	1614
PspPI	GGNCC	7 cut(s)	442, 993, 1494, 1528, 1549, 1614, 1615
PsuI	RGATCY	1 cut(s)	265
PsyI	GACNNNGTC	1 cut(s)	323
PvuII	CAGCTG	2 cut(s)	358, 439
RsaI	GTAC	5 cut(s)	9, 407, 947, 1040, 1205
RsaNI	GTAC	5 cut(s)	8, 406, 946, 1039, 1204
RseI	CAYNNNNRTG	1 cut(s)	1639
SacI	GAGCTC	2 cut(s)	612, 969
SacII	CCGCGG	2 cut(s)	588, 708
SalI	GTCGAC	2 cut(s)	254, 1292
SaqAI	TTAA	1 cut(s)	330
SatI	GCNGC	9 cut(s)	177, 585, 705, 940, 1010, 1216, 1392, 1458, 1580
Sau3AI	GATC	9 cut(s)	265, 427, 514, 576, 627, 1098, 1158, 1422, 1449
Sau96I	GGNCC	7 cut(s)	442, 993, 1494, 1528, 1549, 1614, 1615
SchI	GAGTC	5 cut(s)	214, 281, 314, 593, 1388
ScrFI	CCNGG	9 cut(s)	401, 466, 617, 784, 872, 1351, 1401, 1553, 1619
SduI	GDGCHC	3 cut(s)	612, 969, 1618
SfaNI	GCATC	2 cut(s)	117, 1023
SfiI	GGCCNNNNNGGCC	2 cut(s)	939, 1622
Sfr274I	CTCGAG	1 cut(s)	245
Sfr303I	CCGCGG	2 cut(s)	588, 708
SgrAI	CRCCGGYG	1 cut(s)	1003
SgrBI	CCGCGG	2 cut(s)	588, 708
SgrDI	CGTCGACG	1 cut(s)	1292
SinI	GGWCC	3 cut(s)	442, 993, 1549
SlaI	CTCGAG	1 cut(s)	245
SmiMI	CAYNNNNRTG	1 cut(s)	1639
SmlI	CTYRAG	2 cut(s)	245, 1094
SmoI	CTYRAG	2 cut(s)	245, 1094
Sse9I	AATT	2 cut(s)	484, 1115
SstI	GAGCTC	2 cut(s)	612, 969
StyD4I	CCNGG	9 cut(s)	399, 464, 615, 782, 870, 1349, 1399, 1551, 1617
TaaI	ACNGT	2 cut(s)	593, 1279
TaqII	GACCGA	1 cut(s)	536
TasI	AATT	2 cut(s)	484, 1115
TauI	GCSGC	8 cut(s)	179, 587, 707, 942, 1218, 1394, 1460, 1582
TfiI	GAWTC	6 cut(s)	90, 229, 388, 1104, 1141, 1189
Tru1I	TTAA	1 cut(s)	330
Tru9I	TTAA	1 cut(s)	330
TscAI	CASTG	2 cut(s)	177, 1538
TseFI	GTSAC	1 cut(s)	1253
TseI	GCWGC	1 cut(s)	1009
Tsp45I	GTSAC	1 cut(s)	1253
TspDTI	ATGAA	4 cut(s)	518, 553, 974, 1156
TspGWI	ACGGA	1 cut(s)	130
TspRI	CASTG	2 cut(s)	177, 1538
Tth111I	GACNNNGTC	1 cut(s)	323
VpaK11BI	GGWCC	3 cut(s)	442, 993, 1549
XagI	CCTNNNNNAGG	1 cut(s)	620
XapI	RAATTY	2 cut(s)	484, 1115
XhoI	CTCGAG	1 cut(s)	245
XmiI	GTMKAC	3 cut(s)	255, 471, 1293
XmnI	GAANNNNTTC	2 cut(s)	1119, 1473
ZraI	GACGTC	2 cut(s)	214, 1326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.