Rroxscaffold_2G00143390

Histidine kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
81432648 .. 81438400
5753 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00143390.1

Sequence Viewer

Length: 3642 bp
ATGGGAGCTCTAGTTCTGAGGAAGGTGTTTGATAAAGTTTCTAGCTTTGCTACTTTTCCATGGAGAAGAAGCAGTACTAACAGTGCTGCTACTAGCCCAGAAGGCCAGGGGAGAAGAATCTTTCACAGAGATGTTGAAAGAGACCAGTTTCAGTATGCAAATGCTCATTGTCTTTCATCATATTACAGTGTCTTTGTGGCTCGCCTTGCGATCATGGTTATGCTAGCTATTCTAATTGGACTGTTAACTATACTGACATGGCATTTCACAAGAATATACACAGCAAAATCACTGAGCAACTTAGCTTATGGGCTTCGTTACGAGCTTCTGCAACGCCCCGTTTTGCGGATGTGGAACATCTTGAATTCAACAGCAGAGATAACAACAGCGCAGGTGAAGCTTTCGGAGTATGTGATCAGAAAGTATAGCCACCCTTCTACTCAAGCAGAACAAGTTGAGCTCTATGAATCGATGAGGGCTATGACATGGGCAATGTTTGCAAGTCGAAAAGCTCTGAGTGCAATTACTATCAATTACAGAAATGGTTTTGTCCAGGCATTCCATAGAGATCACAGGAGTAACAACTCGTTTTACATCTACTCTGATCTTGCAAACTATTCAATCACTTCCACCGGGGCTTATGATGCTGATATGTTCTCAACACGTGAGGCGTGGAATGATCAGTCCATACATGGCAACACTTCTGCAAAGTGGTTCCGCGAACCACTAGATCCTGTCACTGGTGAGAAGATAGGTAAAGCAATCCAAATTCAGCCAGACGATCTGATCAACATAGCAGGCCTTTCACAAGTACCAGATGGTGTGGCCACTTGGCACGTGGCGGTCAGCAAGTACTCGGATTCACCATTGCTTTCAGCAGCACTGCCAGTTTCGGATCCTTCCAATAAAAGCATAGTGGCTGTGGTGGGTGTTACCACAGCACTGTATAGTGTTGGACAGCTGATGAAAGAACTTGTTGAGTTTCACAGTGGACATATTTATTTGACGTCTCAAGAAGGTTACTTGCTTTCTACTTCCACGAATGCTCCTCTTTTGACAAATACTACAAAAGGGCCGAAGCTTATGATGGCTACGGATTCGGAGGATCACACAATACGAATGGGAGCTGAGTGGTTACAAAGAGCATATGGCAACAAGTTTCCTCCTAAAGATCAGGAGGTTCATGTTGAAAATGCCAGGCTGGGAAATGAGGAATATTACATCGACTCGTTTTTTCTGAAGCTAAAGAGACTTCCTCTGGTAGGGGTTATCATCATTCCAAGAAAATATATTATGGGGAAGGTGGATGAGAGAGCCTTCAAAACGTTGGTGATCTTGATATCTGCATCATTTTGTATCCTAGTCACTGGATGTGTCTGCATTTTCATACTGACAAATGGAGTATCAAAGGAAATGAAACTAAGAGCAGAGCTGATAAGTCATCTTGATGCGAGGAGACGGGCAGAGGCATCTAGCAACTATAAAAGCCAGTTTCTAGCAAACATGAGTCATGAATTAAGGACACCGATGGCTGCGGTTATTGGGTTACTTGACATTCTTATTAGTGATGACTGCCTTACAAATGAACAGTACTCCACAGTCACTCAAATTAGAAAATGCTCAACAGCTCTACTTCGGCTTCTTAACAATATACTGGATCTGAGCAAGGTTGAATCTGGAAAACTGGTGCTGGAAGAAGCGGAGTTTGATTTGGGAAGAGAACTTGAAGGGCTATTTGATATGTTCTCTGTGCAGTGCATCAACCACAATGTAGAGACTGTTTTAGATCTTTCTGATGATATGCCAAGACTAGTTCGAGGAGACTCTGCAAGAGTTGTTCAAATATTTGCTAATCTAATTAGCAATTCCATCAAGTTCACTACATCTGGTCACATAATACTCAGAGGATCGTGTGAGAACTTGAACTCTTCTGGTGATACCAGGAGAATCAGTCCCGATCAGAAAAGTTTATGGTCTTCACATAAGGCAAAGTTGAAGCAAGGGAACTATGCAAAGAAGGCTCCCAAGAAAGACAACAAAATGATTCTTTGGTTTGAAGTAGATGACACTGGTTGTGGAATTGATGCTAGTAAATGGGAGTCTGTCTTTGAAAGCTTTGAGCAAGCTGATCCCTCAACAACTCGAACGCATGGTGGCACTGGTCTTGGGCTATGCATTGTGCGGACATTGGTTAACAAGATGGGTGGAGAAATTAAGGTTGTAAAGAAGGATGGGCCAGGAACTTTAATGCAGTTGTACTTGGTTCTGAATACACCTGCAGATGGCACAGAGCAATATTGTCAAGTAGATTTTGCAAAGCACGGTGTGGTGGTGCTGCTTGCATTACATGGCAGCATGGGTAGATTGATTATGTCCCAGTGGTTATGTAAAAATGGAGTTTTCACATTGGCAACATCCGAGTGGAATGAGCTGACACAAATTCTTAGGGAACTCTTTAAAGGCAGAAATTCAGCTCGTAATAACAGCCCTGAAGCACATCAGTCACTAAATGAATCTTTGAAAGCTGATATACGAAGTATACATGATATAAGGAACCCAGTTTTTGTCATGGTTGTCGATATAGGAGTGCTTGACTTAAGCACAGATATATGGAAGGAACAGCTCAATTTTCTTGACAAATACTCTGGGAAAGCAACGTTTGCATGGATGCTGAATCATGATACCTCCAATGCCATAAAGATGGAGCTTCGCAGAAGAGGGAATGTATTGATGGTTAACAAACCTCTATACAAAGCAAAAATGGCTCACATTTTGGAAGCTGTCATAAAAGAGAGAAATCTTGAAACACATGAATGCCTTGAGATTGATTCTACTCAGTTTGACGTTGGCTGCAGCTCTGATGAATCTGATAAAGGTGAAAAGAACAACTCCAGTTCCAAAAGTTCATTTCATATTGGAGAAAGACGAAGAGACAAGATTGCGAAAAATTGTTCCTCACAGTACCAGACTATTAACAGCTGCTTAGTCGAACTCGCAGAGGTACTCCCAAAGGACAATAATTCAAGGAAAGAAGATGCAGAACCCAGATTAATGAGCACCAGTGAAGCATCCCATGATACACAACCTCAATGTGAAGATTCAAAACTTAAAGAACAACAATCGGTCACCAGGAGTCCTAAAGAGAACGGTAACGCATATACAAGGAAACCAGTGAATCAACCAAAGTCTCTTCAAGGCCTACGCATACTGCTCGCGGAAGACACACCAGTACTGCAGAGAGTTGCAAGTATAATGCTAGAAAAGATGGGAGCTACAGTAATTGCTGTGGCCGATGGACTGCAGGCAGTAGATGCTTTGAGTTGTATGCTTAATGCAGAAAATTGTAGACAGGACGTGAAAGATGCACACGAAAATGAAGCTTTGGTTCCGCGTCCATATGACTTGGTCCTAATGGATTGCCAGATGCCAAAGATGGATGGTTATGAAGCAACAAAAGCAATCAGGAAATCCGAAGAGGGAACCAGTTTACACATTCCGATAGTTGCTCTAACAGCTCATGCAATGTCATCAGATGAAGCGAAATGCTTGGAGGTGGGGATGGATGCTTATCTAACAAAGCCAATTGATTACAAGTTGATGGTGTCTACCATTCTCTCACTCACTAAAATAACAGCAGCCTGA

Protein Analysis

1213

Amino Acids

135.6

Weight (kDa)

7.16

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HisKA PF00512 495 - 560 1.7e-17 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 607 - 755 7.1e-18 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Response_reg PF00072 1069 - 1203 7.8e-19 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 382, 2284
AatII GACGTC 1 cut(s) 1010
Acc36I ACCTGC 2 cut(s) 382, 2284
AccI GTMKAC 3 cut(s) 2539, 3346, 3605
AccII CGCG 3 cut(s) 720, 3215, 3391
AciI CCGC 8 cut(s) 346, 718, 842, 1535, 1700, 2182, 3215, 3389
AclI AACGTT 2 cut(s) 1325, 2657
AclWI GGATC 7 cut(s) 725, 890, 903, 1113, 1665, 1915, 2123
AcoI YGGCCR 2 cut(s) 825, 3288
AcsI RAATTY 4 cut(s) 364, 768, 2439, 2467
AcuI CTGAAG 2 cut(s) 1259, 2511
AcvI CACGTG 2 cut(s) 665, 838
AcyI GRCGYC 1 cut(s) 1007
AdeI CACNNNGTG 1 cut(s) 2326
AfaI GTAC 8 cut(s) 76, 813, 854, 1592, 2258, 2963, 3003, 3231
AfiI CCNNNNNNNGG 4 cut(s) 345, 740, 1262, 2282
AflII CTTAAG 1 cut(s) 2596
AflIII ACRYGT 1 cut(s) 662
AhlI ACTAGT 1 cut(s) 1810
AjiI CACGTC 1 cut(s) 3355
AjnI CCWGG 6 cut(s) 105, 552, 1196, 1940, 2236, 3128
AloI GAACNNNNNNTCC 1 cut(s) 29
Alw21I GWGCWC 3 cut(s) 10, 462, 3059
Alw26I GTCTC 8 cut(s) 135, 1014, 1243, 1450, 1769, 1815, 2925, 3192
AlwI GGATC 7 cut(s) 725, 890, 903, 1113, 1665, 1915, 2123
AoxI GGCC 7 cut(s) 103, 799, 825, 1073, 2234, 3196, 3288
ApeKI GCWGC 9 cut(s) 86, 878, 1532, 2335, 2352, 2850, 2853, 2979, 3635
ApoI RAATTY 4 cut(s) 364, 768, 2439, 2467
AseI ATTAAT 1 cut(s) 3050
AspLEI GCGC 1 cut(s) 391
AspS9I GGNCC 3 cut(s) 1073, 2234, 3406
AsuC2I CCSGG 1 cut(s) 634
AsuHPI GGTGA 7 cut(s) 406, 755, 855, 1342, 1946, 2888, 3118
AsuNHI GCTAGC 1 cut(s) 223
AvaII GGWCC 1 cut(s) 3406
BalI TGGCCA 1 cut(s) 827
BamHI GGATCC 1 cut(s) 895
BanII GRGCYC 2 cut(s) 10, 462
BarI GAAGNNNNNNTAC 2 cut(s) 58, 90
BbrPI CACGTG 2 cut(s) 665, 838
BbsI GAAGAC 2 cut(s) 1968, 3225
Bbv12I GWGCWC 3 cut(s) 10, 462, 3059
BbvI GCAGC 8 cut(s) 73, 890, 1519, 2322, 2364, 2837, 2865, 2966
BcgI CGANNNNNNTGC 2 cut(s) 3193, 3227
BciT130I CCWGG 6 cut(s) 107, 554, 1198, 1942, 2238, 3130
BciVI GTATCC 1 cut(s) 1367
BclI TGATCA 3 cut(s) 414, 679, 786
BcnI CCSGG 1 cut(s) 634
BcoDI GTCTC 8 cut(s) 135, 1014, 1243, 1450, 1769, 1815, 2925, 3192
BcuI ACTAGT 1 cut(s) 1810
BfmI CTRYAG 5 cut(s) 2277, 2851, 3233, 3273, 3299
BfrI CTTAAG 1 cut(s) 2596
BfuAI ACCTGC 2 cut(s) 382, 2284
BfuI GTATCC 1 cut(s) 1367
BglI GCCNNNNNGGC 1 cut(s) 102
BglII AGATCT 1 cut(s) 1786
BisI GCNGC 9 cut(s) 87, 879, 1533, 2336, 2353, 2851, 2854, 2980, 3636
BlsI GCNGC 9 cut(s) 88, 880, 1534, 2337, 2354, 2852, 2855, 2981, 3637
BmcAI AGTACT 4 cut(s) 76, 854, 1592, 3231
Bme1390I CCNGG 7 cut(s) 107, 554, 634, 1198, 1942, 2238, 3130
Bme18I GGWCC 1 cut(s) 3406
BmgBI CACGTC 1 cut(s) 3355
BmgT120I GGNCC 3 cut(s) 1073, 2234, 3406
BmiI GGNNCC 6 cut(s) 716, 897, 2022, 2555, 3387, 3481
BmrFI CCNGG 7 cut(s) 107, 554, 634, 1198, 1942, 2238, 3130
BmrI ACTGGG 2 cut(s) 2371, 2552
BmtI GCTAGC 1 cut(s) 227
BmuI ACTGGG 2 cut(s) 2371, 2552
BpiI GAAGAC 2 cut(s) 1968, 3225
BplI GAGNNNNNCTC 2 cut(s) 1240, 1272
BpmI CTGGAG 1 cut(s) 2875
BpuEI CTTGAG 3 cut(s) 426, 996, 2840
BpuMI CCSGG 1 cut(s) 634
Bsa29I ATCGAT 1 cut(s) 470
BsaAI YACGTR 2 cut(s) 665, 838
BsaBI GATNNNNATC 1 cut(s) 3567
BsaHI GRCGYC 1 cut(s) 1007
BsaI GGTCTC 1 cut(s) 135
BsaJI CCNNGG 3 cut(s) 59, 106, 633
BsaXI ACNNNNNCTCC 7 cut(s) 27, 1030, 1060, 1936, 1966, 3261, 3291
Bsc4I CCNNNNNNNGG 4 cut(s) 345, 740, 1262, 2282
Bse3DI GCAATG 3 cut(s) 498, 866, 3528
Bse8I GATNNNNATC 1 cut(s) 3567
BseBI CCWGG 6 cut(s) 107, 554, 1198, 1942, 2238, 3130
BseCI ATCGAT 1 cut(s) 470
BseDI CCNNGG 3 cut(s) 59, 106, 633
BseJI GATNNNNATC 1 cut(s) 3567
BseLI CCNNNNNNNGG 4 cut(s) 345, 740, 1262, 2282
BseMI GCAATG 3 cut(s) 498, 866, 3528
BseMII CTCAG 7 cut(s) 8, 284, 506, 1119, 1652, 1915, 2849
BseRI GAGGAG 3 cut(s) 1038, 1468, 1833
BseXI GCAGC 8 cut(s) 73, 890, 1519, 2322, 2364, 2837, 2865, 2966
BseYI CCCAGC 1 cut(s) 1201
BsgI GTGCAG 1 cut(s) 1772
Bsh1236I CGCG 3 cut(s) 720, 3215, 3391
BshFI GGCC 7 cut(s) 105, 801, 827, 1075, 2236, 3198, 3290
BshVI ATCGAT 1 cut(s) 470
BsiHKAI GWGCWC 3 cut(s) 10, 462, 3059
BsiSI CCGG 1 cut(s) 633
BslFI GGGAC 2 cut(s) 1938, 2359
BslI CCNNNNNNNGG 4 cut(s) 345, 740, 1262, 2282
BsmAI GTCTC 8 cut(s) 135, 1014, 1243, 1450, 1769, 1815, 2925, 3192
BsmBI CGTCTC 2 cut(s) 1014, 1450
BsmFI GGGAC 2 cut(s) 1938, 2359
BsmI GAATGC 3 cut(s) 557, 1048, 2819
BsnI GGCC 7 cut(s) 105, 801, 827, 1075, 2236, 3198, 3290
Bso31I GGTCTC 1 cut(s) 135
Bsp1286I GDGCHC 3 cut(s) 10, 462, 3059
Bsp19I CCATGG 1 cut(s) 59
BspACI CCGC 8 cut(s) 346, 718, 842, 1535, 1700, 2182, 3215, 3389
BspANI GGCC 7 cut(s) 105, 801, 827, 1075, 2236, 3198, 3290
BspCNI CTCAG 7 cut(s) 9, 285, 507, 1120, 1653, 1914, 2848
BspDI ATCGAT 1 cut(s) 470
BspFNI CGCG 3 cut(s) 720, 3215, 3391
BspHI TCATGA 2 cut(s) 1510, 2677
BspLI GGNNCC 6 cut(s) 716, 897, 2022, 2555, 3387, 3481
BspMAI CTGCAG 4 cut(s) 2281, 2855, 3237, 3303
BspMI ACCTGC 2 cut(s) 382, 2284
BspOI GCTAGC 1 cut(s) 227
BspPI GGATC 7 cut(s) 725, 890, 903, 1113, 1665, 1915, 2123
BspTI CTTAAG 1 cut(s) 2596
BspTNI GGTCTC 1 cut(s) 135
BsrDI GCAATG 3 cut(s) 498, 866, 3528
BssECI CCNNGG 3 cut(s) 59, 106, 633
BssNAI GTATAC 1 cut(s) 2540
BssNI GRCGYC 1 cut(s) 1007
BssT1I CCWWGG 1 cut(s) 59
Bst1107I GTATAC 1 cut(s) 2540
Bst2UI CCWGG 6 cut(s) 107, 554, 1198, 1942, 2238, 3130
Bst6I CTCTTC 6 cut(s) 1711, 1933, 2710, 2923, 3195, 3468
BstACI GRCGYC 1 cut(s) 1007
BstAFI CTTAAG 1 cut(s) 2596
BstAPI GCANNNNNTGC 3 cut(s) 497, 2660, 3311
BstBAI YACGTR 2 cut(s) 665, 838
BstC8I GCNNGC 7 cut(s) 202, 225, 799, 2124, 2340, 3213, 3303
BstDSI CCRYGG 1 cut(s) 59
BstEII GGTNACC 1 cut(s) 3124
BstENI CCTNNNNNAGG 1 cut(s) 1260
BstFNI CGCG 3 cut(s) 720, 3215, 3391
BstHHI GCGC 1 cut(s) 391
BstMAI GTCTC 8 cut(s) 135, 1014, 1243, 1450, 1769, 1815, 2925, 3192
BstNI CCWGG 6 cut(s) 107, 554, 1198, 1942, 2238, 3130
BstPI GGTNACC 1 cut(s) 3124
BstSCI CCNGG 7 cut(s) 105, 552, 632, 1196, 1940, 2236, 3128
BstSFI CTRYAG 5 cut(s) 2277, 2851, 3233, 3273, 3299
BstUI CGCG 3 cut(s) 720, 3215, 3391
BstV1I GCAGC 8 cut(s) 73, 890, 1519, 2322, 2364, 2837, 2865, 2966
BstV2I GAAGAC 2 cut(s) 1968, 3225
BstX2I RGATCY 4 cut(s) 730, 895, 1657, 1786
BstXI CCANNNNNNTGG 1 cut(s) 2701
BstYI RGATCY 4 cut(s) 730, 895, 1657, 1786
BstZ17I GTATAC 1 cut(s) 2540
Bsu15I ATCGAT 1 cut(s) 470
BsuI GTATCC 1 cut(s) 1367
BsuRI GGCC 7 cut(s) 105, 801, 827, 1075, 2236, 3198, 3290
BsuTUI ATCGAT 1 cut(s) 470
BtgI CCRYGG 1 cut(s) 59
BtrI CACGTC 1 cut(s) 3355
BtsI GCAGTG 2 cut(s) 881, 1760
BveI ACCTGC 2 cut(s) 382, 2284
Cac8I GCNNGC 7 cut(s) 202, 225, 799, 2124, 2340, 3213, 3303
CciI TCATGA 2 cut(s) 1510, 2677
CfoI GCGC 1 cut(s) 391
Cfr13I GGNCC 3 cut(s) 1073, 2234, 3406
ClaI ATCGAT 1 cut(s) 470
CseI GACGC 1 cut(s) 3380
Csp6I GTAC 8 cut(s) 75, 812, 853, 1591, 2257, 2962, 3002, 3230
CspCI CAANNNNNGTGG 2 cut(s) 2185, 2220
CviQI GTAC 8 cut(s) 75, 812, 853, 1591, 2257, 2962, 3002, 3230
DraI TTTAAA 1 cut(s) 2458
DraIII CACNNNGTG 1 cut(s) 2326
EaeI YGGCCR 2 cut(s) 825, 3288
Eam1104I CTCTTC 6 cut(s) 1711, 1933, 2710, 2923, 3195, 3468
EarI CTCTTC 6 cut(s) 1711, 1933, 2710, 2923, 3195, 3468
Ecl136II GAGCTC 2 cut(s) 8, 460
Eco130I CCWWGG 1 cut(s) 59
Eco147I AGGCCT 2 cut(s) 801, 3198
Eco24I GRGCYC 2 cut(s) 10, 462
Eco31I GGTCTC 1 cut(s) 135
Eco32I GATATC 1 cut(s) 1341
Eco47I GGWCC 1 cut(s) 3406
Eco53kI GAGCTC 2 cut(s) 8, 460
Eco57I CTGAAG 2 cut(s) 1259, 2511
Eco72I CACGTG 2 cut(s) 665, 838
Eco91I GGTNACC 1 cut(s) 3124
EcoICRI GAGCTC 2 cut(s) 8, 460
EcoNI CCTNNNNNAGG 1 cut(s) 1260
EcoO65I GGTNACC 1 cut(s) 3124
EcoRI GAATTC 1 cut(s) 364
EcoRII CCWGG 6 cut(s) 105, 552, 1196, 1940, 2236, 3128
EcoRV GATATC 1 cut(s) 1341
EcoT14I CCWWGG 1 cut(s) 59
EcoT22I ATGCAT 1 cut(s) 2177
EcoT38I GRGCYC 2 cut(s) 10, 462
ErhI CCWWGG 1 cut(s) 59
Esp3I CGTCTC 2 cut(s) 1014, 1450
FaqI GGGAC 2 cut(s) 1938, 2359
FauNDI CATATG 2 cut(s) 1147, 3397
FbaI TGATCA 3 cut(s) 414, 679, 786
FblI GTMKAC 3 cut(s) 2539, 3346, 3605
Fnu4HI GCNGC 9 cut(s) 87, 879, 1533, 2336, 2353, 2851, 2854, 2980, 3636
FriOI GRGCYC 2 cut(s) 10, 462
Fsp4HI GCNGC 9 cut(s) 87, 879, 1533, 2336, 2353, 2851, 2854, 2980, 3636
GlaI GCGC 1 cut(s) 390
GluI GCNGC 9 cut(s) 87, 879, 1533, 2336, 2353, 2851, 2854, 2980, 3636
GsaI CCCAGC 1 cut(s) 1205
GsuI CTGGAG 1 cut(s) 2875
HaeIII GGCC 7 cut(s) 105, 801, 827, 1075, 2236, 3198, 3290
HapII CCGG 1 cut(s) 633
HgaI GACGC 1 cut(s) 3380
HhaI GCGC 1 cut(s) 391
Hin1I GRCGYC 1 cut(s) 1007
Hin6I GCGC 1 cut(s) 389
HinP1I GCGC 1 cut(s) 389
HincII GTYRAC 3 cut(s) 246, 2194, 2737
HindII GTYRAC 3 cut(s) 246, 2194, 2737
HindIII AAGCTT 4 cut(s) 398, 1079, 2113, 3378
HpaI GTTAAC 3 cut(s) 246, 2194, 2737
HpaII CCGG 1 cut(s) 633
HphI GGTGA 7 cut(s) 406, 755, 855, 1342, 1946, 2888, 3118
Hpy166II GTNNAC 9 cut(s) 246, 992, 1878, 2194, 2540, 2737, 3347, 3488, 3606
Hpy8I GTNNAC 9 cut(s) 246, 992, 1878, 2194, 2540, 2737, 3347, 3488, 3606
HpyCH4IV ACGT 7 cut(s) 664, 837, 1007, 1325, 2657, 2844, 3354
HpySE526I ACGT 7 cut(s) 664, 837, 1007, 1325, 2657, 2844, 3354
Hsp92I GRCGYC 1 cut(s) 1007
HspAI GCGC 1 cut(s) 389
Ksp22I TGATCA 3 cut(s) 414, 679, 786
KspAI GTTAAC 3 cut(s) 246, 2194, 2737
LmnI GCTCC 6 cut(s) 5, 1051, 1124, 2026, 2704, 3269
Lsp1109I GCAGC 8 cut(s) 73, 890, 1519, 2322, 2364, 2837, 2865, 2966
MaeII ACGT 7 cut(s) 664, 837, 1007, 1325, 2657, 2844, 3354
MfeI CAATTG 1 cut(s) 3582
MflI RGATCY 4 cut(s) 730, 895, 1657, 1786
MhlI GDGCHC 3 cut(s) 10, 462, 3059
MlsI TGGCCA 1 cut(s) 827
MluNI TGGCCA 1 cut(s) 827
MlyI GAGTC 5 cut(s) 1220, 1516, 1817, 2108, 3142
MmeI TCCRAC 1 cut(s) 934
Mox20I TGGCCA 1 cut(s) 827
Mph1103I ATGCAT 1 cut(s) 2177
MscI TGGCCA 1 cut(s) 827
MslI CAYNNNNRTG 7 cut(s) 129, 218, 1446, 2419, 2699, 2812, 3372
Msp20I TGGCCA 1 cut(s) 827
MspA1I CMGCKG 2 cut(s) 961, 2979
MspCI CTTAAG 1 cut(s) 2596
MspI CCGG 1 cut(s) 633
MspR9I CCNGG 7 cut(s) 107, 554, 634, 1198, 1942, 2238, 3130
MunI CAATTG 1 cut(s) 3582
Mva1269I GAATGC 3 cut(s) 557, 1048, 2819
MvaI CCWGG 6 cut(s) 107, 554, 1198, 1942, 2238, 3130
MvnI CGCG 3 cut(s) 720, 3215, 3391
NciI CCSGG 1 cut(s) 634
NcoI CCATGG 1 cut(s) 59
NdeI CATATG 2 cut(s) 1147, 3397
NheI GCTAGC 1 cut(s) 223
NlaIV GGNNCC 6 cut(s) 716, 897, 2022, 2555, 3387, 3481
NmuCI GTSAC 6 cut(s) 736, 1363, 1600, 1889, 2502, 3124
NsiI ATGCAT 1 cut(s) 2177
PagI TCATGA 2 cut(s) 1510, 2677
PaqCI CACCTGC 2 cut(s) 382, 2284
PceI AGGCCT 2 cut(s) 801, 3198
PctI GAATGC 3 cut(s) 557, 1048, 2819
PflFI GACNNNGTC 1 cut(s) 3404
PkrI GCNGC 9 cut(s) 88, 880, 1534, 2337, 2354, 2852, 2855, 2981, 3637
PleI GAGTC 5 cut(s) 1220, 1515, 1817, 2107, 3141
PmaCI CACGTG 2 cut(s) 665, 838
PmlI CACGTG 2 cut(s) 665, 838
PpsI GAGTC 5 cut(s) 1220, 1515, 1817, 2107, 3141
Ppu21I YACGTR 2 cut(s) 665, 838
PshBI ATTAAT 1 cut(s) 3050
Psp124BI GAGCTC 2 cut(s) 10, 462
Psp1406I AACGTT 2 cut(s) 1325, 2657
Psp6I CCWGG 6 cut(s) 105, 552, 1196, 1940, 2236, 3128
PspCI CACGTG 2 cut(s) 665, 838
PspEI GGTNACC 1 cut(s) 3124
PspFI CCCAGC 1 cut(s) 1201
PspGI CCWGG 6 cut(s) 105, 552, 1196, 1940, 2236, 3128
PspN4I GGNNCC 6 cut(s) 716, 897, 2022, 2555, 3387, 3481
PspPI GGNCC 3 cut(s) 1073, 2234, 3406
PstI CTGCAG 4 cut(s) 2281, 2855, 3237, 3303
PsuI RGATCY 4 cut(s) 730, 895, 1657, 1786
PsyI GACNNNGTC 1 cut(s) 3404
PvuII CAGCTG 2 cut(s) 961, 2979
RsaI GTAC 8 cut(s) 76, 813, 854, 1592, 2258, 2963, 3003, 3231
RsaNI GTAC 8 cut(s) 75, 812, 853, 1591, 2257, 2962, 3002, 3230
RseI CAYNNNNRTG 7 cut(s) 129, 218, 1446, 2419, 2699, 2812, 3372
SacI GAGCTC 2 cut(s) 10, 462
SatI GCNGC 9 cut(s) 87, 879, 1533, 2336, 2353, 2851, 2854, 2980, 3636
Sau96I GGNCC 3 cut(s) 1073, 2234, 3406
ScaI AGTACT 4 cut(s) 76, 854, 1592, 3231
SchI GAGTC 5 cut(s) 1220, 1516, 1817, 2108, 3142
ScrFI CCNGG 7 cut(s) 107, 554, 634, 1198, 1942, 2238, 3130
SduI GDGCHC 3 cut(s) 10, 462, 3059
SfcI CTRYAG 5 cut(s) 2277, 2851, 3233, 3273, 3299
SinI GGWCC 1 cut(s) 3406
SmiMI CAYNNNNRTG 7 cut(s) 129, 218, 1446, 2419, 2699, 2812, 3372
SmlI CTYRAG 4 cut(s) 441, 1011, 2596, 2819
SmoI CTYRAG 4 cut(s) 441, 1011, 2596, 2819
SpeI ACTAGT 1 cut(s) 1810
SseBI AGGCCT 2 cut(s) 801, 3198
SsiI CCGC 8 cut(s) 346, 718, 842, 1535, 1700, 2182, 3215, 3389
SspI AATATT 3 cut(s) 1217, 1845, 2297
SstI GAGCTC 2 cut(s) 10, 462
StuI AGGCCT 2 cut(s) 801, 3198
StyD4I CCNGG 7 cut(s) 105, 552, 632, 1196, 1940, 2236, 3128
StyI CCWWGG 1 cut(s) 59
TaiI ACGT 7 cut(s) 667, 840, 1010, 1328, 2660, 2847, 3357
TaqI TCGA 7 cut(s) 470, 505, 1224, 1816, 2143, 2577, 2988
TaqII GACCGA 1 cut(s) 3112
TatI WGTACW 5 cut(s) 74, 852, 1590, 2256, 3229
TseFI GTSAC 6 cut(s) 736, 1363, 1600, 1889, 2502, 3124
TseI GCWGC 9 cut(s) 86, 878, 1532, 2335, 2352, 2850, 2853, 2979, 3635
Tsp45I GTSAC 6 cut(s) 736, 1363, 1600, 1889, 2502, 3124
TspGWI ACGGA 1 cut(s) 1109
Tth111I GACNNNGTC 1 cut(s) 3404
Vha464I CTTAAG 1 cut(s) 2596
VpaK11BI GGWCC 1 cut(s) 3406
VspI ATTAAT 1 cut(s) 3050
XagI CCTNNNNNAGG 1 cut(s) 1260
XapI RAATTY 4 cut(s) 364, 768, 2439, 2467
XcmI CCANNNNNNNNNTGG 1 cut(s) 835
XmiI GTMKAC 3 cut(s) 2539, 3346, 3605
ZraI GACGTC 1 cut(s) 1008
ZrmI AGTACT 4 cut(s) 76, 854, 1592, 3231
Zsp2I ATGCAT 1 cut(s) 2177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.