Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008496

Physical Location & Seq

Genomic Coordinates Reverse (-)

6207021 .. 6209772

Gene Structure 2752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0077300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGATAAGGTTAAATTGCCTCAATTTGGCGCGAACCCACACAACCGTCGTCTTCTTAACGATGACCACCGTGCCGGAATTGACCGATCTCTTCGCCCGGCTCGCTTCCCACTTAAACGACACGTCGTTGCCTCATCGCACTACCCAAGAAGAACAAGACGAAGCTGCTCTGGACCTATCCATTTCCAATCTGAACCGATCCCTAAACGTCAGCGACAATTCTAGGGTTAGGGTTTTGGACGCCGTCCTATCTCTGATGTGCTTCAAAGCACCCCAGGTTTTTGATTCGGTGATTGAGTATTCGGTGAAGACAATTGTCACTGTTTTGTTGTCTTCGATTCGTTGCGACGTCTTTCGGTCTCCGAAAGATGAAGTCTTGATGATCGGGAGCTCTATTTCTCACCGAGATTGCGGTAATTTGATCGAATCGTGTGCTGAGATTCTTGGCAAATTGGAGGGACATGGTAAGCTTTCGGAGTCTTTACTGTGCGCCATTGTAAGAGTTGCAAGTTCGGCATCTCTGTACCGGCAGCTGTCAACGCTCATTCGTGATGTGAAATCAGTGGATGCGAGGAATAGCTTGATTTCAAAGCTGCTATGTCATTTGCCTAGAGCAACCTTGCTTGATAACAACAAAATATCTCTCAGATTGCTGGTCTGGTATCTTCATCCGCTAGTTTTGAAGCGCGATGTTTCAAACATCTTGCAAGAAGCCATGAGGAGGCCCTTCCTTTGTTTGAGTAAGGAGTTCCATGAGAGTACTGAGTGGCGCTCCATCATCATATCCTTGGTACTTTCTCCCATTATGTTTGTTGAGGCTAGAGCTTTGTTACACAGATGGTTTTTAGTCACGGGTTTAGCTTCTGTGCTTGAGCTTCTAATTCAATTGGTCTCAGTGACATTAGATGTGGTTTCGAGACCCATGTTCTGGGACATTTCAGCAGAATTGGGAGGAAGGTTACCATTTTCTAATGCTTATTTTCCTTACAACCACCAGTTGTTAAGGAACTTGGCTGGACCCCTCTCTTATGATGATTTCTTACAATTAGTGCGCCAGACGAGTGAACCAGTACCTTCTTCCAAAACTCAACTTTATCCATCTATTAAGTCACCTATACTGAAGGTTGCGACAGTCGATCACAAATCTATCTGGTCTCTGGCCATCAACTTCCCAGATTGGTTCTACTTTGCTTCTGCATTGCTCTTCTCGGGGAAAGGTTCCCTCGACATTTGTCATAAACTATGCTTATTGGCGGCATCCAAAGTTGGGAAAACACATTATGAAGAACTACCTTCTATTGCTGCAGCAAGGTACATTGCCTGGATTTTGAGTCCTGTTAGTAAATCTCACCAGGATAGGCTGGCTGATTGTTTGATTAAACATTCAGAGTCCCTGGCTTTTAAACAGTCACATGACAAAGAAACATTCTACAAGAAGAAACTCAAGAAACTCAAACTCTGTGAAGAGGACCATACTTCCACAAGAGAGTATGATGATCAAAGCATTGCAGTCTGGCTCAATGGATTCAATAATATATGCACAATGTACTGTAGTGAAACTGTTAACAATGGTACATCATCTGAAACAAAACCATCCAGTGGTCTTAGTCTGCAGAAAAATGTCTTGTTCCGGAGAATCCCACTAGGTATCTTGCTTTGTTGCCCCAGTCATCTCAATGAAGATGGATTAGAACTGCTGCTGCATTATGCCACCACAGGTAGAATTTTTCAGTCAAGGGAAACTAAGATTCCCGGATTGAAGCATGTAAAATGGAACTCCAGAGGGAATAAGAACCCAATTACATGGAGTGATGAATGTAATGAAAAAGAGGTTGTAGCAGGTGCCTTTCTTGTCTTCAGCTTAACCGATATTGTTGAAAGCATGTGTTCTTCACTGTTTGAGACTGAAGAGGCTAGCAGAGACTTTATTTGCCGGGTGAAAATGCAGGTAGGCAAATACTTGATAAAATGCATCAAGAGGTTCATTCAACTCAAAGTTGATGATGAAGATGTGGTGGTGATGGATCTCTGCCGTAGATTGGAGCAGTGGAGCCATCAAGGACGGGTAGTATTAGAGCTCCAGAATGATCTTGATAATGTCATTCAAGTCATTAATCAGAGATTTGCTTTTTGTGCTTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004888 GO:0005034 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009628 GO:0009791 GO:0009927 GO:0009987 GO:0010035 GO:0010154 GO:0010375 GO:0010431 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0021700 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0032504 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071695 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HATPase_c HisKA Response_reg

Protein Analysis

713

Amino Acids

80.7

Weight (kDa)

8.11

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17820
fragaria_vesca	FvH4_1g11530 FvH4_1g11530 FvH4_1g11530 FvH4_1g11530 FvH4_1g11530 FvH4_1g11530
malus_domestica	MD02G1128300.v1.1 MD15G1243500.v1.1
prunus_persica	Prupe.7G170700_v2.0.a1 Prupe.7G170700_v2.0.a1
pyrus_communis	pycom02g10030
rosa_chinensis	RchiOBHm_Chr2g0099171
rosa_laevigata	RLG00000016852
rosa_multiflora	Rmu_sc0009113.1_g000004
rosa_roxburghii	Rroxscaffold_2G00143390
rosa_rugosa	Rorug02G0077300 Rorug02G0077400
rosa_samantha	Rh2AG126300 Rh2BG129500 Rh2CG130500 Rh2DG130900
rosa_wichuraiana	Rw2G009740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1829
AatII	GACGTC	1 cut(s)	351
Acc36I	ACCTGC	2 cut(s)	1829, 1936
AccB1I	GGYRCC	1 cut(s)	1841
AccB7I	CCANNNNNTGG	2 cut(s)	927, 1598
AccII	CGCG	2 cut(s)	31, 687
AccIII	TCCGGA	1 cut(s)	1629
AciI	CCGC	3 cut(s)	411, 671, 1253
AclWI	GGATC	2 cut(s)	192, 2031
AcoI	YGGCCR	1 cut(s)	1158
AcsI	RAATTY	1 cut(s)	1722
AcuI	CTGAAG	3 cut(s)	1139, 1840, 1926
AcyI	GRCGYC	2 cut(s)	240, 348
AfaI	GTAC	7 cut(s)	524, 760, 792, 1071, 1313, 1547, 1573
AfiI	CCNNNNNNNGG	6 cut(s)	25, 720, 927, 1266, 1598, 2038
AflIII	ACRYGT	1 cut(s)	120
AjiI	CACGTC	1 cut(s)	123
AjnI	CCWGG	4 cut(s)	273, 1319, 1350, 1392
Alw21I	GWGCWC	2 cut(s)	392, 2079
Alw26I	GTCTC	6 cut(s)	363, 895, 910, 1158, 1895, 1914
AlwI	GGATC	2 cut(s)	192, 2031
Ama87I	CYCGRG	1 cut(s)	1207
Aor13HI	TCCGGA	1 cut(s)	1629
AoxI	GGCC	2 cut(s)	722, 1158
ApeKI	GCWGC	7 cut(s)	164, 529, 592, 1301, 1304, 1696, 1699
ApoI	RAATTY	1 cut(s)	1722
AseI	ATTAAT	1 cut(s)	2112
AspLEI	GCGC	5 cut(s)	31, 491, 687, 771, 1053
AspS9I	GGNCC	4 cut(s)	172, 723, 1016, 1468
AsuC2I	CCSGG	3 cut(s)	97, 1752, 1934
AsuHPI	GGTGA	7 cut(s)	301, 316, 392, 1101, 1340, 1948, 2029
AsuNHI	GCTAGC	1 cut(s)	1913
AvaI	CYCGRG	1 cut(s)	1207
AvaII	GGWCC	3 cut(s)	172, 1016, 1468
BalI	TGGCCA	1 cut(s)	1160
BanI	GGYRCC	1 cut(s)	1841
BanII	GRGCYC	2 cut(s)	392, 2079
BbsI	GAAGAC	4 cut(s)	43, 314, 324, 1846
Bbv12I	GWGCWC	2 cut(s)	392, 2079
BbvI	GCAGC	7 cut(s)	151, 541, 579, 1288, 1316, 1683, 1686
BccI	CCATC	8 cut(s)	782, 831, 1105, 1169, 1600, 1676, 2014, 2061
BceAI	ACGGC	2 cut(s)	227, 2016
BcgI	CGANNNNNNTGC	2 cut(s)	413, 447
BciT130I	CCWGG	4 cut(s)	275, 1321, 1352, 1394
BclI	TGATCA	1 cut(s)	1495
BcnI	CCSGG	3 cut(s)	97, 1752, 1934
BcoDI	GTCTC	6 cut(s)	363, 895, 910, 1158, 1895, 1914
BfaI	CTAG	6 cut(s)	222, 609, 674, 819, 1643, 1914
BfmI	CTRYAG	3 cut(s)	1302, 1549, 1610
BfoI	RGCGCY	1 cut(s)	772
BfuAI	ACCTGC	2 cut(s)	1829, 1936
BisI	GCNGC	8 cut(s)	165, 530, 593, 1254, 1302, 1305, 1697, 1700
BlsI	GCNGC	8 cut(s)	166, 531, 594, 1255, 1303, 1306, 1698, 1701
BmcAI	AGTACT	1 cut(s)	760
Bme1390I	CCNGG	7 cut(s)	97, 275, 1321, 1352, 1394, 1752, 1934
Bme18I	GGWCC	3 cut(s)	172, 1016, 1468
BmeT110I	CYCGRG	1 cut(s)	1207
BmgBI	CACGTC	1 cut(s)	123
BmgT120I	GGNCC	4 cut(s)	172, 723, 1016, 1468
BmiI	GGNNCC	4 cut(s)	1018, 1219, 1843, 2051
BmrFI	CCNGG	7 cut(s)	97, 275, 1321, 1352, 1394, 1752, 1934
BmrI	ACTGGG	1 cut(s)	1659
BmsI	GCATC	4 cut(s)	524, 556, 1265, 1980
BmtI	GCTAGC	1 cut(s)	1917
BmuI	ACTGGG	1 cut(s)	1659
BoxI	GACNNNNGTC	2 cut(s)	314, 1230
BpiI	GAAGAC	4 cut(s)	43, 314, 324, 1846
BplI	GAGNNNNNCTC	2 cut(s)	755, 787
BpmI	CTGGAG	2 cut(s)	1762, 2063
BpuEI	CTTGAG	2 cut(s)	890, 1427
BpuMI	CCSGG	3 cut(s)	97, 1752, 1934
BsaHI	GRCGYC	2 cut(s)	240, 348
BsaI	GGTCTC	4 cut(s)	363, 895, 910, 1158
BsaJI	CCNNGG	3 cut(s)	273, 786, 1392
BsaWI	WCCGGW	1 cut(s)	1629
Bsc4I	CCNNNNNNNGG	6 cut(s)	25, 720, 927, 1266, 1598, 2038
Bse118I	RCCGGY	1 cut(s)	525
Bse1I	ACTGG	4 cut(s)	994, 1067, 1596, 1665
Bse3DI	GCAATG	3 cut(s)	1196, 1314, 1503
BseAI	TCCGGA	1 cut(s)	1629
BseBI	CCWGG	4 cut(s)	275, 1321, 1352, 1394
BseDI	CCNNGG	3 cut(s)	273, 786, 1392
BseGI	GGATG	4 cut(s)	571, 667, 1256, 1592
BseLI	CCNNNNNNNGG	6 cut(s)	25, 720, 927, 1266, 1598, 2038
BseMI	GCAATG	3 cut(s)	1196, 1314, 1503
BseMII	CTCAG	4 cut(s)	426, 658, 753, 906
BseNI	ACTGG	4 cut(s)	994, 1067, 1596, 1665
BseRI	GAGGAG	1 cut(s)	733
BseXI	GCAGC	7 cut(s)	151, 541, 579, 1288, 1316, 1683, 1686
Bsh1236I	CGCG	2 cut(s)	31, 687
BshFI	GGCC	2 cut(s)	724, 1160
BshNI	GGYRCC	1 cut(s)	1841
BsiHKAI	GWGCWC	2 cut(s)	392, 2079
BsiHKCI	CYCGRG	1 cut(s)	1207
BsiSI	CCGG	6 cut(s)	74, 97, 526, 1630, 1752, 1933
BslFI	GGGAC	3 cut(s)	471, 944, 1375
BslI	CCNNNNNNNGG	6 cut(s)	25, 720, 927, 1266, 1598, 2038
BsmAI	GTCTC	6 cut(s)	363, 895, 910, 1158, 1895, 1914
BsmFI	GGGAC	3 cut(s)	471, 944, 1375
BsnI	GGCC	2 cut(s)	724, 1160
Bso31I	GGTCTC	4 cut(s)	363, 895, 910, 1158
BsoBI	CYCGRG	1 cut(s)	1207
Bsp1286I	GDGCHC	2 cut(s)	392, 2079
Bsp13I	TCCGGA	1 cut(s)	1629
Bsp143I	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
BspACI	CCGC	3 cut(s)	411, 671, 1253
BspANI	GGCC	2 cut(s)	724, 1160
BspCNI	CTCAG	4 cut(s)	427, 657, 754, 905
BspEI	TCCGGA	1 cut(s)	1629
BspFNI	CGCG	2 cut(s)	31, 687
BspHI	TCATGA	1 cut(s)	2138
BspLI	GGNNCC	4 cut(s)	1018, 1219, 1843, 2051
BspMAI	CTGCAG	2 cut(s)	1306, 1614
BspMI	ACCTGC	2 cut(s)	1829, 1936
BspOI	GCTAGC	1 cut(s)	1917
BspPI	GGATC	2 cut(s)	192, 2031
BspQI	GCTCTTC	1 cut(s)	1208
BspT107I	GGYRCC	1 cut(s)	1841
BspTNI	GGTCTC	4 cut(s)	363, 895, 910, 1158
BsrDI	GCAATG	3 cut(s)	1196, 1314, 1503
BsrFI	RCCGGY	1 cut(s)	525
BsrI	ACTGG	4 cut(s)	994, 1067, 1596, 1665
BssAI	RCCGGY	1 cut(s)	525
BssECI	CCNNGG	3 cut(s)	273, 786, 1392
BssMI	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
BssNI	GRCGYC	2 cut(s)	240, 348
BssT1I	CCWWGG	1 cut(s)	786
Bst2UI	CCWGG	4 cut(s)	275, 1321, 1352, 1394
Bst4CI	ACNGT	9 cut(s)	46, 70, 322, 486, 1132, 1407, 1550, 1561, 1896
Bst6I	CTCTTC	4 cut(s)	95, 1208, 1458, 1902
BstACI	GRCGYC	2 cut(s)	240, 348
BstC8I	GCNNGC	3 cut(s)	102, 1362, 1915
BstDEI	CTNAG	6 cut(s)	435, 644, 762, 892, 1604, 1743
BstEII	GGTNACC	1 cut(s)	957
BstF5I	GGATG	4 cut(s)	571, 667, 1256, 1592
BstFNI	CGCG	2 cut(s)	31, 687
BstH2I	RGCGCY	1 cut(s)	772
BstHHI	GCGC	5 cut(s)	31, 491, 687, 771, 1053
BstKTI	GATC	8 cut(s)	88, 200, 384, 423, 1138, 1498, 2026, 2089
BstMAI	GTCTC	6 cut(s)	363, 895, 910, 1158, 1895, 1914
BstMBI	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
BstMWI	GCNNNNNNNGC	4 cut(s)	101, 512, 538, 2132
BstNI	CCWGG	4 cut(s)	275, 1321, 1352, 1394
BstNSI	RCATGY	2 cut(s)	1766, 1885
BstPAI	GACNNNNGTC	2 cut(s)	314, 1230
BstPI	GGTNACC	1 cut(s)	957
BstSCI	CCNGG	7 cut(s)	95, 273, 1319, 1350, 1392, 1750, 1932
BstSFI	CTRYAG	3 cut(s)	1302, 1549, 1610
BstUI	CGCG	2 cut(s)	31, 687
BstV1I	GCAGC	7 cut(s)	151, 541, 579, 1288, 1316, 1683, 1686
BstV2I	GAAGAC	4 cut(s)	43, 314, 324, 1846
BstX2I	RGATCY	1 cut(s)	2023
BstXI	CCANNNNNNTGG	1 cut(s)	1803
BstYI	RGATCY	1 cut(s)	2023
BsuRI	GGCC	2 cut(s)	724, 1160
BtgZI	GCGATG	2 cut(s)	119, 702
BtrI	CACGTC	1 cut(s)	123
BtsCI	GGATG	4 cut(s)	571, 667, 1256, 1592
BtsI	GCAGTG	1 cut(s)	2051
BtsIMutI	CAGTG	6 cut(s)	318, 567, 900, 1603, 1892, 2051
BveI	ACCTGC	2 cut(s)	1829, 1936
Cac8I	GCNNGC	3 cut(s)	102, 1362, 1915
CciI	TCATGA	1 cut(s)	2138
CfoI	GCGC	5 cut(s)	31, 491, 687, 771, 1053
Cfr10I	RCCGGY	1 cut(s)	525
Cfr13I	GGNCC	4 cut(s)	172, 723, 1016, 1468
CseI	GACGC	1 cut(s)	248
Csp6I	GTAC	7 cut(s)	523, 759, 791, 1070, 1312, 1546, 1572
CviAII	CATG	9 cut(s)	461, 715, 752, 922, 1412, 1763, 1803, 1882, 2139
CviQI	GTAC	7 cut(s)	523, 759, 791, 1070, 1312, 1546, 1572
DdeI	CTNAG	6 cut(s)	435, 644, 762, 892, 1604, 1743
DpnI	GATC	8 cut(s)	87, 199, 383, 422, 1137, 1497, 2025, 2088
DpnII	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
DraI	TTTAAA	1 cut(s)	1402
EaeI	YGGCCR	1 cut(s)	1158
Eam1104I	CTCTTC	4 cut(s)	95, 1208, 1458, 1902
EarI	CTCTTC	4 cut(s)	95, 1208, 1458, 1902
Ecl136II	GAGCTC	2 cut(s)	390, 2077
Eco130I	CCWWGG	1 cut(s)	786
Eco24I	GRGCYC	2 cut(s)	392, 2079
Eco31I	GGTCTC	4 cut(s)	363, 895, 910, 1158
Eco47I	GGWCC	3 cut(s)	172, 1016, 1468
Eco53kI	GAGCTC	2 cut(s)	390, 2077
Eco57I	CTGAAG	3 cut(s)	1139, 1840, 1926
Eco88I	CYCGRG	1 cut(s)	1207
Eco91I	GGTNACC	1 cut(s)	957
EcoICRI	GAGCTC	2 cut(s)	390, 2077
EcoO109I	RGGNCCY	1 cut(s)	723
EcoO65I	GGTNACC	1 cut(s)	957
EcoRII	CCWGG	4 cut(s)	273, 1319, 1350, 1392
EcoT14I	CCWWGG	1 cut(s)	786
EcoT22I	ATGCAT	1 cut(s)	1973
EcoT38I	GRGCYC	2 cut(s)	392, 2079
ErhI	CCWWGG	1 cut(s)	786
FaeI	CATG	9 cut(s)	464, 718, 755, 925, 1415, 1766, 1806, 1885, 2142
FaqI	GGGAC	3 cut(s)	471, 944, 1375
FatI	CATG	9 cut(s)	460, 714, 751, 921, 1411, 1762, 1802, 1881, 2138
FbaI	TGATCA	1 cut(s)	1495
Fnu4HI	GCNGC	8 cut(s)	165, 530, 593, 1254, 1302, 1305, 1697, 1700
FokI	GGATG	4 cut(s)	578, 654, 1243, 1579
FriOI	GRGCYC	2 cut(s)	392, 2079
Fsp4HI	GCNGC	8 cut(s)	165, 530, 593, 1254, 1302, 1305, 1697, 1700
FspBI	CTAG	6 cut(s)	222, 609, 674, 819, 1643, 1914
GlaI	GCGC	5 cut(s)	30, 490, 686, 770, 1052
GluI	GCNGC	8 cut(s)	165, 530, 593, 1254, 1302, 1305, 1697, 1700
GsuI	CTGGAG	2 cut(s)	1762, 2063
HaeII	RGCGCY	1 cut(s)	772
HaeIII	GGCC	2 cut(s)	724, 1160
HapII	CCGG	6 cut(s)	74, 97, 526, 1630, 1752, 1933
HgaI	GACGC	1 cut(s)	248
HhaI	GCGC	5 cut(s)	31, 491, 687, 771, 1053
Hin1I	GRCGYC	2 cut(s)	240, 348
Hin1II	CATG	9 cut(s)	464, 718, 755, 925, 1415, 1766, 1806, 1885, 2142
Hin6I	GCGC	5 cut(s)	29, 489, 685, 769, 1051
HinP1I	GCGC	5 cut(s)	29, 489, 685, 769, 1051
HincII	GTYRAC	2 cut(s)	537, 1564
HindII	GTYRAC	2 cut(s)	537, 1564
HindIII	AAGCTT	1 cut(s)	467
HpaI	GTTAAC	1 cut(s)	1564
HpaII	CCGG	6 cut(s)	74, 97, 526, 1630, 1752, 1933
HphI	GGTGA	7 cut(s)	301, 316, 392, 1101, 1340, 1948, 2029
Hpy166II	GTNNAC	3 cut(s)	537, 1064, 1564
Hpy188I	TCNGA	8 cut(s)	192, 255, 363, 475, 647, 1387, 1582, 2118
Hpy8I	GTNNAC	3 cut(s)	537, 1064, 1564
Hpy99I	CGWCG	3 cut(s)	50, 127, 350
HpyAV	CCTTC	5 cut(s)	736, 948, 1083, 1114, 1302
HpyCH4III	ACNGT	9 cut(s)	46, 70, 322, 486, 1132, 1407, 1550, 1561, 1896
HpyCH4IV	ACGT	3 cut(s)	122, 207, 348
HpyF10VI	GCNNNNNNNGC	4 cut(s)	101, 512, 538, 2132
HpyF3I	CTNAG	6 cut(s)	435, 644, 762, 892, 1604, 1743
HpySE526I	ACGT	3 cut(s)	122, 207, 348
Hsp92I	GRCGYC	2 cut(s)	240, 348
Hsp92II	CATG	9 cut(s)	464, 718, 755, 925, 1415, 1766, 1806, 1885, 2142
HspAI	GCGC	5 cut(s)	29, 489, 685, 769, 1051
Kpn2I	TCCGGA	1 cut(s)	1629
Ksp22I	TGATCA	1 cut(s)	1495
KspAI	GTTAAC	1 cut(s)	1564
Kzo9I	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
LguI	GCTCTTC	1 cut(s)	1208
LmnI	GCTCC	5 cut(s)	387, 776, 2041, 2049, 2082
Lsp1109I	GCAGC	7 cut(s)	151, 541, 579, 1288, 1316, 1683, 1686
LweI	GCATC	4 cut(s)	524, 556, 1265, 1980
MaeI	CTAG	6 cut(s)	222, 609, 674, 819, 1643, 1914
MaeII	ACGT	3 cut(s)	122, 207, 348
MaeIII	GTNAC	7 cut(s)	316, 828, 847, 895, 957, 1107, 1407
MalI	GATC	8 cut(s)	87, 199, 383, 422, 1137, 1497, 2025, 2088
MboI	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
MfeI	CAATTG	2 cut(s)	312, 884
MflI	RGATCY	1 cut(s)	2023
MhlI	GDGCHC	2 cut(s)	392, 2079
MlsI	TGGCCA	1 cut(s)	1160
MluNI	TGGCCA	1 cut(s)	1160
MlyI	GAGTC	3 cut(s)	485, 1339, 1397
Mox20I	TGGCCA	1 cut(s)	1160
Mph1103I	ATGCAT	1 cut(s)	1973
MroI	TCCGGA	1 cut(s)	1629
MscI	TGGCCA	1 cut(s)	1160
MslI	CAYNNNNRTG	1 cut(s)	1674
Msp20I	TGGCCA	1 cut(s)	1160
MspA1I	CMGCKG	1 cut(s)	532
MspI	CCGG	6 cut(s)	74, 97, 526, 1630, 1752, 1933
MspR9I	CCNGG	7 cut(s)	97, 275, 1321, 1352, 1394, 1752, 1934
MunI	CAATTG	2 cut(s)	312, 884
MvaI	CCWGG	4 cut(s)	275, 1321, 1352, 1394
MvnI	CGCG	2 cut(s)	31, 687
MwoI	GCNNNNNNNGC	4 cut(s)	101, 512, 538, 2132
NciI	CCSGG	3 cut(s)	97, 1752, 1934
NdeII	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
NheI	GCTAGC	1 cut(s)	1913
NlaIII	CATG	9 cut(s)	464, 718, 755, 925, 1415, 1766, 1806, 1885, 2142
NlaIV	GGNNCC	4 cut(s)	1018, 1219, 1843, 2051
NmuCI	GTSAC	5 cut(s)	316, 847, 895, 1107, 1407
NsiI	ATGCAT	1 cut(s)	1973
NspI	RCATGY	2 cut(s)	1766, 1885
PagI	TCATGA	1 cut(s)	2138
PaqCI	CACCTGC	1 cut(s)	1829
PciSI	GCTCTTC	1 cut(s)	1208
PfeI	GAWTC	7 cut(s)	284, 337, 425, 439, 1524, 1635, 1747
PflFI	GACNNNGTC	1 cut(s)	242
PflMI	CCANNNNNTGG	2 cut(s)	927, 1598
PfoI	TCCNGGA	1 cut(s)	1750
PkrI	GCNGC	8 cut(s)	166, 531, 594, 1255, 1303, 1306, 1698, 1701
PleI	GAGTC	3 cut(s)	484, 1338, 1396
PpsI	GAGTC	3 cut(s)	484, 1338, 1396
PshAI	GACNNNNGTC	2 cut(s)	314, 1230
PshBI	ATTAAT	1 cut(s)	2112
Psp124BI	GAGCTC	2 cut(s)	392, 2079
Psp6I	CCWGG	4 cut(s)	273, 1319, 1350, 1392
PspEI	GGTNACC	1 cut(s)	957
PspGI	CCWGG	4 cut(s)	273, 1319, 1350, 1392
PspN4I	GGNNCC	4 cut(s)	1018, 1219, 1843, 2051
PspPI	GGNCC	4 cut(s)	172, 723, 1016, 1468
PstI	CTGCAG	2 cut(s)	1306, 1614
PsuI	RGATCY	1 cut(s)	2023
PsyI	GACNNNGTC	1 cut(s)	242
PvuII	CAGCTG	1 cut(s)	532
RsaI	GTAC	7 cut(s)	524, 760, 792, 1071, 1313, 1547, 1573
RsaNI	GTAC	7 cut(s)	523, 759, 791, 1070, 1312, 1546, 1572
RseI	CAYNNNNRTG	1 cut(s)	1674
SacI	GAGCTC	2 cut(s)	392, 2079
SapI	GCTCTTC	1 cut(s)	1208
SatI	GCNGC	8 cut(s)	165, 530, 593, 1254, 1302, 1305, 1697, 1700
Sau3AI	GATC	8 cut(s)	85, 197, 381, 420, 1135, 1495, 2023, 2086
Sau96I	GGNCC	4 cut(s)	172, 723, 1016, 1468
ScaI	AGTACT	1 cut(s)	760
SchI	GAGTC	3 cut(s)	485, 1339, 1397
ScrFI	CCNGG	7 cut(s)	97, 275, 1321, 1352, 1394, 1752, 1934
SduI	GDGCHC	2 cut(s)	392, 2079
SfaNI	GCATC	4 cut(s)	524, 556, 1265, 1980
SfcI	CTRYAG	3 cut(s)	1302, 1549, 1610
SinI	GGWCC	3 cut(s)	172, 1016, 1468
SmiMI	CAYNNNNRTG	1 cut(s)	1674
SmlI	CTYRAG	2 cut(s)	869, 1442
SmoI	CTYRAG	2 cut(s)	869, 1442
SsiI	CCGC	3 cut(s)	411, 671, 1253
SspMI	CTAG	6 cut(s)	222, 609, 674, 819, 1643, 1914
SstI	GAGCTC	2 cut(s)	392, 2079
StyD4I	CCNGG	7 cut(s)	95, 273, 1319, 1350, 1392, 1750, 1932
StyI	CCWWGG	1 cut(s)	786
TaaI	ACNGT	9 cut(s)	46, 70, 322, 486, 1132, 1407, 1550, 1561, 1896
TaiI	ACGT	3 cut(s)	125, 210, 351
TaqI	TCGA	5 cut(s)	335, 423, 914, 1134, 1224
TaqII	GACCGA	2 cut(s)	98, 345
TatI	WGTACW	2 cut(s)	758, 1545
TauI	GCSGC	1 cut(s)	1256
TfiI	GAWTC	7 cut(s)	284, 337, 425, 439, 1524, 1635, 1747
TscAI	CASTG	6 cut(s)	325, 567, 900, 1603, 1899, 2051
TseFI	GTSAC	5 cut(s)	316, 847, 895, 1107, 1407
TseI	GCWGC	7 cut(s)	164, 529, 592, 1301, 1304, 1696, 1699
Tsp45I	GTSAC	5 cut(s)	316, 847, 895, 1107, 1407
TspDTI	ATGAA	9 cut(s)	384, 656, 1296, 1692, 1827, 1836, 1972, 2019, 2127
TspRI	CASTG	6 cut(s)	325, 567, 900, 1603, 1899, 2051
Tth111I	GACNNNGTC	1 cut(s)	242
Van91I	CCANNNNNTGG	2 cut(s)	927, 1598
VpaK11BI	GGWCC	3 cut(s)	172, 1016, 1468
VspI	ATTAAT	1 cut(s)	2112
XapI	RAATTY	1 cut(s)	1722
XceI	RCATGY	2 cut(s)	1766, 1885
XspI	CTAG	6 cut(s)	222, 609, 674, 819, 1643, 1914
ZraI	GACGTC	1 cut(s)	349
ZrmI	AGTACT	1 cut(s)	760
Zsp2I	ATGCAT	1 cut(s)	1973

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.