Histidine kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17820 |
| fragaria_vesca | FvH4_1g11530 FvH4_1g11530 FvH4_1g11530 FvH4_1g11530 FvH4_1g11530 FvH4_1g11530 |
| malus_domestica | MD02G1128300.v1.1 MD15G1243500.v1.1 |
| prunus_persica | Prupe.7G170700_v2.0.a1 Prupe.7G170700_v2.0.a1 |
| pyrus_communis | pycom02g10030 |
| rosa_chinensis | RchiOBHm_Chr2g0099171 |
| rosa_laevigata | RLG00000016852 |
| rosa_multiflora | Rmu_sc0009113.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00143390 |
| rosa_rugosa | Rorug02G0077300 Rorug02G0077400 |
| rosa_samantha | Rh2AG126300 Rh2BG129500 Rh2CG130500 Rh2DG130900 |
| rosa_wichuraiana | Rw2G009740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2317 |
| AatII | GACGTC | 1 cut(s) | 1043 |
| Acc36I | ACCTGC | 1 cut(s) | 2317 |
| AccI | GTMKAC | 3 cut(s) | 2572, 3379, 3638 |
| AccII | CGCG | 3 cut(s) | 753, 3248, 3424 |
| AciI | CCGC | 7 cut(s) | 379, 751, 875, 1568, 2215, 3248, 3422 |
| AclI | AACGTT | 2 cut(s) | 1358, 2690 |
| AclWI | GGATC | 7 cut(s) | 758, 923, 936, 1146, 1698, 1948, 2156 |
| AcoI | YGGCCR | 2 cut(s) | 858, 3321 |
| AcsI | RAATTY | 4 cut(s) | 397, 801, 2472, 2500 |
| AcuI | CTGAAG | 2 cut(s) | 1292, 2544 |
| AcvI | CACGTG | 2 cut(s) | 698, 871 |
| AcyI | GRCGYC | 1 cut(s) | 1040 |
| AdeI | CACNNNGTG | 1 cut(s) | 2359 |
| AfaI | GTAC | 8 cut(s) | 109, 846, 887, 980, 1625, 2291, 2996, 3036 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 773, 1295, 2315 |
| AflII | CTTAAG | 1 cut(s) | 2629 |
| AflIII | ACRYGT | 1 cut(s) | 695 |
| AhlI | ACTAGT | 1 cut(s) | 1843 |
| AjiI | CACGTC | 1 cut(s) | 3388 |
| AjnI | CCWGG | 6 cut(s) | 138, 585, 1229, 1973, 2269, 3161 |
| AleI | CACNNNNGTG | 1 cut(s) | 3260 |
| Alw21I | GWGCWC | 3 cut(s) | 43, 495, 3092 |
| Alw26I | GTCTC | 8 cut(s) | 168, 1047, 1276, 1483, 1802, 1848, 2958, 3225 |
| AlwI | GGATC | 7 cut(s) | 758, 923, 936, 1146, 1698, 1948, 2156 |
| AoxI | GGCC | 6 cut(s) | 136, 832, 858, 2267, 3229, 3321 |
| ApeKI | GCWGC | 9 cut(s) | 119, 911, 1565, 2385, 2883, 2886, 3012, 3265, 3668 |
| ApoI | RAATTY | 4 cut(s) | 397, 801, 2472, 2500 |
| AseI | ATTAAT | 1 cut(s) | 3083 |
| AspLEI | GCGC | 1 cut(s) | 3426 |
| AspS9I | GGNCC | 1 cut(s) | 2267 |
| AsuC2I | CCSGG | 2 cut(s) | 667, 2680 |
| AsuHPI | GGTGA | 7 cut(s) | 439, 788, 888, 1375, 1979, 2921, 3151 |
| BalI | TGGCCA | 1 cut(s) | 860 |
| BamHI | GGATCC | 1 cut(s) | 928 |
| BanII | GRGCYC | 2 cut(s) | 43, 495 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 91, 123, 1041, 1073 |
| BbrPI | CACGTG | 2 cut(s) | 698, 871 |
| BbsI | GAAGAC | 2 cut(s) | 2001, 3258 |
| Bbv12I | GWGCWC | 3 cut(s) | 43, 495, 3092 |
| BbvI | GCAGC | 8 cut(s) | 106, 923, 1552, 2397, 2870, 2898, 2999, 3252 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3226, 3260 |
| BciT130I | CCWGG | 6 cut(s) | 140, 587, 1231, 1975, 2271, 3163 |
| BciVI | GTATCC | 1 cut(s) | 1400 |
| BclI | TGATCA | 3 cut(s) | 447, 712, 819 |
| BcnI | CCSGG | 2 cut(s) | 667, 2680 |
| BcoDI | GTCTC | 8 cut(s) | 168, 1047, 1276, 1483, 1802, 1848, 2958, 3225 |
| BcuI | ACTAGT | 1 cut(s) | 1843 |
| BfaI | CTAG | 8 cut(s) | 75, 126, 1394, 1506, 1529, 1844, 2121, 3290 |
| BfmI | CTRYAG | 5 cut(s) | 2310, 2884, 3266, 3306, 3332 |
| BfrI | CTTAAG | 1 cut(s) | 2629 |
| BfuAI | ACCTGC | 1 cut(s) | 2317 |
| BfuI | GTATCC | 1 cut(s) | 1400 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 135 |
| BglII | AGATCT | 1 cut(s) | 1819 |
| BisI | GCNGC | 9 cut(s) | 120, 912, 1566, 2386, 2884, 2887, 3013, 3266, 3669 |
| BlsI | GCNGC | 9 cut(s) | 121, 913, 1567, 2387, 2885, 2888, 3014, 3267, 3670 |
| BmcAI | AGTACT | 3 cut(s) | 109, 887, 1625 |
| Bme1390I | CCNGG | 8 cut(s) | 140, 587, 667, 1231, 1975, 2271, 2680, 3163 |
| BmgBI | CACGTC | 1 cut(s) | 3388 |
| BmgT120I | GGNCC | 1 cut(s) | 2267 |
| BmiI | GGNNCC | 5 cut(s) | 749, 930, 2588, 3420, 3514 |
| BmrFI | CCNGG | 8 cut(s) | 140, 587, 667, 1231, 1975, 2271, 2680, 3163 |
| BmrI | ACTGGG | 2 cut(s) | 2404, 2585 |
| BmuI | ACTGGG | 2 cut(s) | 2404, 2585 |
| BpiI | GAAGAC | 2 cut(s) | 2001, 3258 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1273, 1305 |
| BpmI | CTGGAG | 1 cut(s) | 2908 |
| BpuEI | CTTGAG | 3 cut(s) | 459, 1029, 2873 |
| BpuMI | CCSGG | 2 cut(s) | 667, 2680 |
| Bsa29I | ATCGAT | 1 cut(s) | 503 |
| BsaAI | YACGTR | 2 cut(s) | 698, 871 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3600 |
| BsaHI | GRCGYC | 1 cut(s) | 1040 |
| BsaI | GGTCTC | 1 cut(s) | 168 |
| BsaJI | CCNNGG | 3 cut(s) | 92, 139, 666 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1063, 1093, 1969, 1999, 2660, 2690, 3294, 3324 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 773, 1295, 2315 |
| Bse3DI | GCAATG | 3 cut(s) | 531, 899, 3561 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3600 |
| BseBI | CCWGG | 6 cut(s) | 140, 587, 1231, 1975, 2271, 3163 |
| BseCI | ATCGAT | 1 cut(s) | 503 |
| BseDI | CCNNGG | 3 cut(s) | 92, 139, 666 |
| BseJI | GATNNNNATC | 1 cut(s) | 3600 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 773, 1295, 2315 |
| BseMI | GCAATG | 3 cut(s) | 531, 899, 3561 |
| BseMII | CTCAG | 7 cut(s) | 41, 317, 539, 1152, 1685, 1725, 1948 |
| BseRI | GAGGAG | 3 cut(s) | 1071, 1259, 1866 |
| BseXI | GCAGC | 8 cut(s) | 106, 923, 1552, 2397, 2870, 2898, 2999, 3252 |
| BseYI | CCCAGC | 1 cut(s) | 1234 |
| BsgI | GTGCAG | 1 cut(s) | 1805 |
| Bsh1236I | CGCG | 3 cut(s) | 753, 3248, 3424 |
| BshFI | GGCC | 6 cut(s) | 138, 834, 860, 2269, 3231, 3323 |
| BshVI | ATCGAT | 1 cut(s) | 503 |
| BsiHKAI | GWGCWC | 3 cut(s) | 43, 495, 3092 |
| BsiSI | CCGG | 2 cut(s) | 666, 2679 |
| BslFI | GGGAC | 2 cut(s) | 1971, 2392 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 773, 1295, 2315 |
| BsmAI | GTCTC | 8 cut(s) | 168, 1047, 1276, 1483, 1802, 1848, 2958, 3225 |
| BsmBI | CGTCTC | 2 cut(s) | 1047, 1483 |
| BsmFI | GGGAC | 2 cut(s) | 1971, 2392 |
| BsmI | GAATGC | 3 cut(s) | 590, 1081, 2852 |
| BsnI | GGCC | 6 cut(s) | 138, 834, 860, 2269, 3231, 3323 |
| Bso31I | GGTCTC | 1 cut(s) | 168 |
| Bsp1286I | GDGCHC | 3 cut(s) | 43, 495, 3092 |
| Bsp1407I | TGTACA | 1 cut(s) | 978 |
| Bsp19I | CCATGG | 1 cut(s) | 92 |
| BspACI | CCGC | 7 cut(s) | 379, 751, 875, 1568, 2215, 3248, 3422 |
| BspANI | GGCC | 6 cut(s) | 138, 834, 860, 2269, 3231, 3323 |
| BspCNI | CTCAG | 7 cut(s) | 42, 318, 540, 1153, 1686, 1726, 1947 |
| BspDI | ATCGAT | 1 cut(s) | 503 |
| BspFNI | CGCG | 3 cut(s) | 753, 3248, 3424 |
| BspHI | TCATGA | 2 cut(s) | 1543, 2710 |
| BspLI | GGNNCC | 5 cut(s) | 749, 930, 2588, 3420, 3514 |
| BspMAI | CTGCAG | 4 cut(s) | 2314, 2888, 3270, 3336 |
| BspMI | ACCTGC | 1 cut(s) | 2317 |
| BspPI | GGATC | 7 cut(s) | 758, 923, 936, 1146, 1698, 1948, 2156 |
| BspTI | CTTAAG | 1 cut(s) | 2629 |
| BspTNI | GGTCTC | 1 cut(s) | 168 |
| BsrDI | GCAATG | 3 cut(s) | 531, 899, 3561 |
| BsrGI | TGTACA | 1 cut(s) | 978 |
| BssECI | CCNNGG | 3 cut(s) | 92, 139, 666 |
| BssNAI | GTATAC | 1 cut(s) | 2573 |
| BssNI | GRCGYC | 1 cut(s) | 1040 |
| BssT1I | CCWWGG | 1 cut(s) | 92 |
| Bst1107I | GTATAC | 1 cut(s) | 2573 |
| Bst2UI | CCWGG | 6 cut(s) | 140, 587, 1231, 1975, 2271, 3163 |
| Bst6I | CTCTTC | 5 cut(s) | 1744, 1966, 2743, 2956, 3228 |
| BstACI | GRCGYC | 1 cut(s) | 1040 |
| BstAFI | CTTAAG | 1 cut(s) | 2629 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 530, 2693, 3344 |
| BstAUI | TGTACA | 1 cut(s) | 978 |
| BstBAI | YACGTR | 2 cut(s) | 698, 871 |
| BstC8I | GCNNGC | 9 cut(s) | 235, 258, 755, 832, 2157, 2373, 2466, 3246, 3336 |
| BstDSI | CCRYGG | 1 cut(s) | 92 |
| BstEII | GGTNACC | 1 cut(s) | 3157 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1293 |
| BstFNI | CGCG | 3 cut(s) | 753, 3248, 3424 |
| BstHHI | GCGC | 1 cut(s) | 3426 |
| BstMAI | GTCTC | 8 cut(s) | 168, 1047, 1276, 1483, 1802, 1848, 2958, 3225 |
| BstNI | CCWGG | 6 cut(s) | 140, 587, 1231, 1975, 2271, 3163 |
| BstPI | GGTNACC | 1 cut(s) | 3157 |
| BstSCI | CCNGG | 8 cut(s) | 138, 585, 665, 1229, 1973, 2269, 2678, 3161 |
| BstSFI | CTRYAG | 5 cut(s) | 2310, 2884, 3266, 3306, 3332 |
| BstUI | CGCG | 3 cut(s) | 753, 3248, 3424 |
| BstV1I | GCAGC | 8 cut(s) | 106, 923, 1552, 2397, 2870, 2898, 2999, 3252 |
| BstV2I | GAAGAC | 2 cut(s) | 2001, 3258 |
| BstX2I | RGATCY | 3 cut(s) | 928, 1690, 1819 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2734 |
| BstYI | RGATCY | 3 cut(s) | 928, 1690, 1819 |
| BstZ17I | GTATAC | 1 cut(s) | 2573 |
| Bsu15I | ATCGAT | 1 cut(s) | 503 |
| BsuI | GTATCC | 1 cut(s) | 1400 |
| BsuRI | GGCC | 6 cut(s) | 138, 834, 860, 2269, 3231, 3323 |
| BsuTUI | ATCGAT | 1 cut(s) | 503 |
| BtgI | CCRYGG | 1 cut(s) | 92 |
| BtrI | CACGTC | 1 cut(s) | 3388 |
| BtsI | GCAGTG | 2 cut(s) | 914, 1793 |
| BveI | ACCTGC | 1 cut(s) | 2317 |
| Cac8I | GCNNGC | 9 cut(s) | 235, 258, 755, 832, 2157, 2373, 2466, 3246, 3336 |
| CciI | TCATGA | 2 cut(s) | 1543, 2710 |
| CfoI | GCGC | 1 cut(s) | 3426 |
| Cfr13I | GGNCC | 1 cut(s) | 2267 |
| ClaI | ATCGAT | 1 cut(s) | 503 |
| Csp6I | GTAC | 8 cut(s) | 108, 845, 886, 979, 1624, 2290, 2995, 3035 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2218, 2253 |
| CviQI | GTAC | 8 cut(s) | 108, 845, 886, 979, 1624, 2290, 2995, 3035 |
| DraI | TTTAAA | 1 cut(s) | 2491 |
| DraIII | CACNNNGTG | 1 cut(s) | 2359 |
| EaeI | YGGCCR | 2 cut(s) | 858, 3321 |
| Eam1104I | CTCTTC | 5 cut(s) | 1744, 1966, 2743, 2956, 3228 |
| EarI | CTCTTC | 5 cut(s) | 1744, 1966, 2743, 2956, 3228 |
| Ecl136II | GAGCTC | 2 cut(s) | 41, 493 |
| Eco130I | CCWWGG | 1 cut(s) | 92 |
| Eco147I | AGGCCT | 2 cut(s) | 834, 3231 |
| Eco24I | GRGCYC | 2 cut(s) | 43, 495 |
| Eco31I | GGTCTC | 1 cut(s) | 168 |
| Eco32I | GATATC | 1 cut(s) | 1374 |
| Eco53kI | GAGCTC | 2 cut(s) | 41, 493 |
| Eco57I | CTGAAG | 2 cut(s) | 1292, 2544 |
| Eco72I | CACGTG | 2 cut(s) | 698, 871 |
| Eco91I | GGTNACC | 1 cut(s) | 3157 |
| EcoICRI | GAGCTC | 2 cut(s) | 41, 493 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1293 |
| EcoO65I | GGTNACC | 1 cut(s) | 3157 |
| EcoRI | GAATTC | 1 cut(s) | 397 |
| EcoRII | CCWGG | 6 cut(s) | 138, 585, 1229, 1973, 2269, 3161 |
| EcoRV | GATATC | 1 cut(s) | 1374 |
| EcoT14I | CCWWGG | 1 cut(s) | 92 |
| EcoT22I | ATGCAT | 1 cut(s) | 2210 |
| EcoT38I | GRGCYC | 2 cut(s) | 43, 495 |
| ErhI | CCWWGG | 1 cut(s) | 92 |
| Esp3I | CGTCTC | 2 cut(s) | 1047, 1483 |
| FaqI | GGGAC | 2 cut(s) | 1971, 2392 |
| FauNDI | CATATG | 2 cut(s) | 1180, 3430 |
| FbaI | TGATCA | 3 cut(s) | 447, 712, 819 |
| FblI | GTMKAC | 3 cut(s) | 2572, 3379, 3638 |
| Fnu4HI | GCNGC | 9 cut(s) | 120, 912, 1566, 2386, 2884, 2887, 3013, 3266, 3669 |
| FriOI | GRGCYC | 2 cut(s) | 43, 495 |
| Fsp4HI | GCNGC | 9 cut(s) | 120, 912, 1566, 2386, 2884, 2887, 3013, 3266, 3669 |
| FspBI | CTAG | 8 cut(s) | 75, 126, 1394, 1506, 1529, 1844, 2121, 3290 |
| GlaI | GCGC | 1 cut(s) | 3425 |
| GluI | GCNGC | 9 cut(s) | 120, 912, 1566, 2386, 2884, 2887, 3013, 3266, 3669 |
| GsaI | CCCAGC | 1 cut(s) | 1238 |
| GsuI | CTGGAG | 1 cut(s) | 2908 |
| HaeIII | GGCC | 6 cut(s) | 138, 834, 860, 2269, 3231, 3323 |
| HapII | CCGG | 2 cut(s) | 666, 2679 |
| HhaI | GCGC | 1 cut(s) | 3426 |
| Hin1I | GRCGYC | 1 cut(s) | 1040 |
| Hin6I | GCGC | 1 cut(s) | 3424 |
| HinP1I | GCGC | 1 cut(s) | 3424 |
| HincII | GTYRAC | 2 cut(s) | 279, 2227 |
| HindII | GTYRAC | 2 cut(s) | 279, 2227 |
| HindIII | AAGCTT | 3 cut(s) | 431, 1112, 2146 |
| HpaI | GTTAAC | 2 cut(s) | 279, 2227 |
| HpaII | CCGG | 2 cut(s) | 666, 2679 |
| HphI | GGTGA | 7 cut(s) | 439, 788, 888, 1375, 1979, 2921, 3151 |
| Hpy166II | GTNNAC | 9 cut(s) | 6, 279, 1025, 1911, 2227, 2573, 3380, 3521, 3639 |
| Hpy8I | GTNNAC | 9 cut(s) | 6, 279, 1025, 1911, 2227, 2573, 3380, 3521, 3639 |
| HpyCH4IV | ACGT | 7 cut(s) | 697, 870, 1040, 1358, 2690, 2877, 3387 |
| HpySE526I | ACGT | 7 cut(s) | 697, 870, 1040, 1358, 2690, 2877, 3387 |
| Hsp92I | GRCGYC | 1 cut(s) | 1040 |
| HspAI | GCGC | 1 cut(s) | 3424 |
| Ksp22I | TGATCA | 3 cut(s) | 447, 712, 819 |
| KspAI | GTTAAC | 2 cut(s) | 279, 2227 |
| LmnI | GCTCC | 5 cut(s) | 38, 1084, 1157, 2737, 3302 |
| Lsp1109I | GCAGC | 8 cut(s) | 106, 923, 1552, 2397, 2870, 2898, 2999, 3252 |
| MaeI | CTAG | 8 cut(s) | 75, 126, 1394, 1506, 1529, 1844, 2121, 3290 |
| MaeII | ACGT | 7 cut(s) | 697, 870, 1040, 1358, 2690, 2877, 3387 |
| MfeI | CAATTG | 1 cut(s) | 3615 |
| MflI | RGATCY | 3 cut(s) | 928, 1690, 1819 |
| MhlI | GDGCHC | 3 cut(s) | 43, 495, 3092 |
| MlsI | TGGCCA | 1 cut(s) | 860 |
| MluNI | TGGCCA | 1 cut(s) | 860 |
| MlyI | GAGTC | 5 cut(s) | 1253, 1549, 1850, 2141, 3175 |
| MmeI | TCCRAC | 1 cut(s) | 967 |
| Mox20I | TGGCCA | 1 cut(s) | 860 |
| Mph1103I | ATGCAT | 1 cut(s) | 2210 |
| MscI | TGGCCA | 1 cut(s) | 860 |
| MslI | CAYNNNNRTG | 8 cut(s) | 162, 251, 1479, 2452, 2732, 2845, 3260, 3405 |
| Msp20I | TGGCCA | 1 cut(s) | 860 |
| MspA1I | CMGCKG | 1 cut(s) | 3012 |
| MspCI | CTTAAG | 1 cut(s) | 2629 |
| MspI | CCGG | 2 cut(s) | 666, 2679 |
| MspR9I | CCNGG | 8 cut(s) | 140, 587, 667, 1231, 1975, 2271, 2680, 3163 |
| MunI | CAATTG | 1 cut(s) | 3615 |
| Mva1269I | GAATGC | 3 cut(s) | 590, 1081, 2852 |
| MvaI | CCWGG | 6 cut(s) | 140, 587, 1231, 1975, 2271, 3163 |
| MvnI | CGCG | 3 cut(s) | 753, 3248, 3424 |
| NciI | CCSGG | 2 cut(s) | 667, 2680 |
| NcoI | CCATGG | 1 cut(s) | 92 |
| NdeI | CATATG | 2 cut(s) | 1180, 3430 |
| NlaIV | GGNNCC | 5 cut(s) | 749, 930, 2588, 3420, 3514 |
| NmuCI | GTSAC | 6 cut(s) | 769, 1396, 1633, 1922, 2535, 3157 |
| NsiI | ATGCAT | 1 cut(s) | 2210 |
| OliI | CACNNNNGTG | 1 cut(s) | 3260 |
| PagI | TCATGA | 2 cut(s) | 1543, 2710 |
| PaqCI | CACCTGC | 1 cut(s) | 2317 |
| PceI | AGGCCT | 2 cut(s) | 834, 3231 |
| PctI | GAATGC | 3 cut(s) | 590, 1081, 2852 |
| PflFI | GACNNNGTC | 1 cut(s) | 3437 |
| PfoI | TCCNGGA | 1 cut(s) | 2678 |
| PkrI | GCNGC | 9 cut(s) | 121, 913, 1567, 2387, 2885, 2888, 3014, 3267, 3670 |
| PleI | GAGTC | 5 cut(s) | 1253, 1548, 1850, 2140, 3174 |
| PmaCI | CACGTG | 2 cut(s) | 698, 871 |
| PmlI | CACGTG | 2 cut(s) | 698, 871 |
| PpsI | GAGTC | 5 cut(s) | 1253, 1548, 1850, 2140, 3174 |
| Ppu21I | YACGTR | 2 cut(s) | 698, 871 |
| PshBI | ATTAAT | 1 cut(s) | 3083 |
| Psp124BI | GAGCTC | 2 cut(s) | 43, 495 |
| Psp1406I | AACGTT | 2 cut(s) | 1358, 2690 |
| Psp6I | CCWGG | 6 cut(s) | 138, 585, 1229, 1973, 2269, 3161 |
| PspCI | CACGTG | 2 cut(s) | 698, 871 |
| PspEI | GGTNACC | 1 cut(s) | 3157 |
| PspFI | CCCAGC | 1 cut(s) | 1234 |
| PspGI | CCWGG | 6 cut(s) | 138, 585, 1229, 1973, 2269, 3161 |
| PspN4I | GGNNCC | 5 cut(s) | 749, 930, 2588, 3420, 3514 |
| PspPI | GGNCC | 1 cut(s) | 2267 |
| PstI | CTGCAG | 4 cut(s) | 2314, 2888, 3270, 3336 |
| PsuI | RGATCY | 3 cut(s) | 928, 1690, 1819 |
| PsyI | GACNNNGTC | 1 cut(s) | 3437 |
| PvuII | CAGCTG | 1 cut(s) | 3012 |
| RsaI | GTAC | 8 cut(s) | 109, 846, 887, 980, 1625, 2291, 2996, 3036 |
| RsaNI | GTAC | 8 cut(s) | 108, 845, 886, 979, 1624, 2290, 2995, 3035 |
| RseI | CAYNNNNRTG | 8 cut(s) | 162, 251, 1479, 2452, 2732, 2845, 3260, 3405 |
| SacI | GAGCTC | 2 cut(s) | 43, 495 |
| SatI | GCNGC | 9 cut(s) | 120, 912, 1566, 2386, 2884, 2887, 3013, 3266, 3669 |
| Sau96I | GGNCC | 1 cut(s) | 2267 |
| ScaI | AGTACT | 3 cut(s) | 109, 887, 1625 |
| SchI | GAGTC | 5 cut(s) | 1253, 1549, 1850, 2141, 3175 |
| ScrFI | CCNGG | 8 cut(s) | 140, 587, 667, 1231, 1975, 2271, 2680, 3163 |
| SduI | GDGCHC | 3 cut(s) | 43, 495, 3092 |
| SfcI | CTRYAG | 5 cut(s) | 2310, 2884, 3266, 3306, 3332 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 162, 251, 1479, 2452, 2732, 2845, 3260, 3405 |
| SmlI | CTYRAG | 4 cut(s) | 474, 1044, 2629, 2852 |
| SmoI | CTYRAG | 4 cut(s) | 474, 1044, 2629, 2852 |
| SpeI | ACTAGT | 1 cut(s) | 1843 |
| SseBI | AGGCCT | 2 cut(s) | 834, 3231 |
| SsiI | CCGC | 7 cut(s) | 379, 751, 875, 1568, 2215, 3248, 3422 |
| SspI | AATATT | 2 cut(s) | 1878, 2330 |
| SspMI | CTAG | 8 cut(s) | 75, 126, 1394, 1506, 1529, 1844, 2121, 3290 |
| SstI | GAGCTC | 2 cut(s) | 43, 495 |
| StuI | AGGCCT | 2 cut(s) | 834, 3231 |
| StyD4I | CCNGG | 8 cut(s) | 138, 585, 665, 1229, 1973, 2269, 2678, 3161 |
| StyI | CCWWGG | 1 cut(s) | 92 |
| TaiI | ACGT | 7 cut(s) | 700, 873, 1043, 1361, 2693, 2880, 3390 |
| TaqI | TCGA | 7 cut(s) | 503, 538, 1257, 1849, 2176, 2610, 3021 |
| TaqII | GACCGA | 1 cut(s) | 3145 |
| TatI | WGTACW | 5 cut(s) | 107, 885, 978, 1623, 2289 |
| TseFI | GTSAC | 6 cut(s) | 769, 1396, 1633, 1922, 2535, 3157 |
| TseI | GCWGC | 9 cut(s) | 119, 911, 1565, 2385, 2883, 2886, 3012, 3265, 3668 |
| Tsp45I | GTSAC | 6 cut(s) | 769, 1396, 1633, 1922, 2535, 3157 |
| TspGWI | ACGGA | 1 cut(s) | 1142 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3437 |
| Vha464I | CTTAAG | 1 cut(s) | 2629 |
| VspI | ATTAAT | 1 cut(s) | 3083 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1293 |
| XapI | RAATTY | 4 cut(s) | 397, 801, 2472, 2500 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 868 |
| XmiI | GTMKAC | 3 cut(s) | 2572, 3379, 3638 |
| XspI | CTAG | 8 cut(s) | 75, 126, 1394, 1506, 1529, 1844, 2121, 3290 |
| ZraI | GACGTC | 1 cut(s) | 1041 |
| ZrmI | AGTACT | 3 cut(s) | 109, 887, 1625 |
| Zsp2I | ATGCAT | 1 cut(s) | 2210 |