Rroxscaffold_2G00149590

3-hydroxyisobutyrate dehydrogenase-like 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0016018
Physical Location & Seq
Reverse (-)
87135005 .. 87136232
1228 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00149590.1

Sequence Viewer

Length: 945 bp
ATGGCCGCCGCCTCCACCGAGCCCGCCGTAAGCCCATCAACCACCCGCGTGGGCTGGATCGGCACCGGAGTCATGGGCCGGTCCATGTGCGGCCACCTCCTCAAAGCCGGCTACACTCTCACCATCTTCAACCGCACCCTATCCAAGGCCCAGCCGCTTCTCGATTTGGGCGCCAAACTCGCCGATTCCCCACGCGCCGTCGCCTCCCAATCCGACGTCGTCTTCTCCATCGTCGGCTACCCCTCCGACGTCCGCTCCGTCCTCCTCGACCCCAACTCCGGAGCCCTCTCCGGCCTCCGCCCCGGCGGCGTCCTCGTCGACATGACCACCTCCGAGCCCTCCCTCGCCGTCGAGATCTCCCAATCCGCCGCCGCCAAGTCCTGCTCCTCGATCGACGCGCCGGTCACCGGCGGAGACGTTGGCGCGAAAAACGGGACCTTAGCGATTCTGGCGGGCGGGGACGAAGCCGTCGTGGGGAGGCTGATTCCCCTTTTTGCCCTCATGGGTAAGGTTAATTACATGGGTGCCCCCGGGAAGGGCCAGTTTGCAAAGCTAGCGAACCAGACCATCATATGTTCAACAATGTTGGGCCTAGTAGAAGGCATGGTTTTTGCCCACAAGGCTGGGCTTGATGTGGGCCTGTTCTTGAAGGCAATCTCGGTCGGGGCGGCCGGGTCCAGGTCGTTGGATATGCATGGAGCTAGGATTCTGAAGAGGGATTTCGAGCCGGGATTCTATGTGAATCACTTTGTGAAGGACTTGGGGATTTGTTTGAAGGAGTGCCAGAACATGGGGCTGGCTCTGCCGGGGTTGGCTCTGGCTCAGCAGCTTTACTTGTCACTCAAGGCTCATGGTGAGGGCAATTTGGGCACCCAAGCGCTCATTGTGGCTCTGGAGCGCCTCAACAATGTGTCACTTGAACAACAGTCTGGGTTGACAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAD_binding_11 NAD_binding_2

Protein Analysis

314

Amino Acids

32.4

Weight (kDa)

8.56

Isoelectric Point (pI)

34.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Shikimate_DH PF01488 13 - 78 7.9e-06 Shikimate / quinate 5-dehydrogenase
NAD_binding_2 PF03446 16 - 174 4.7e-45 NAD binding domain of 6-phosphogluconate dehydrogenase
NAD_binding_11 PF14833 178 - 296 3.9e-34 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016018)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G29120
fragaria_vesca FvH4_1g06170
malus_domestica MD02G1065900.v1.1 MD02G1066000.v1.1
prunus_persica Prupe.7G219600_v2.0.a1
pyrus_communis pycom02g05230
rosa_chinensis RchiOBHm_Chr2g0091951
rosa_laevigata RLG00000016265
rosa_multiflora Rmu_sc0009216.1_g000005 Rmu_sc0017125.1_g000007
rosa_roxburghii Rroxscaffold_2G00149590
rosa_rugosa Rorug02G0021800
rosa_samantha Rh2AG067400 Rh2DG066500
rosa_wichuraiana Rw2G005360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 401, 467
AatII GACGTC 2 cut(s) 219, 252
AccB1I GGYRCC 4 cut(s) 62, 170, 524, 869
AccB7I CCANNNNNTGG 1 cut(s) 790
AccBSI CCGCTC 1 cut(s) 255
AccI GTMKAC 1 cut(s) 318
AccII CGCG 4 cut(s) 48, 195, 398, 425
AccIII TCCGGA 1 cut(s) 278
AclWI GGATC 1 cut(s) 65
AcoI YGGCCR 3 cut(s) 3, 91, 669
AcuI CTGAAG 1 cut(s) 731
AcyI GRCGYC 4 cut(s) 171, 216, 249, 309
AdeI CACNNNGTG 1 cut(s) 751
AfeI AGCGCT 1 cut(s) 879
AfiI CCNNNNNNNGG 8 cut(s) 145, 278, 407, 474, 535, 536, 678, 790
AgsI TTSAA 5 cut(s) 130, 579, 649, 775, 920
AjnI CCWGG 1 cut(s) 677
AleI CACNNNNGTG 1 cut(s) 47
AluBI AGCT 3 cut(s) 553, 701, 829
AluI AGCT 3 cut(s) 553, 701, 829
Alw26I GTCTC 1 cut(s) 408
AlwI GGATC 1 cut(s) 65
Ama87I CYCGRG 1 cut(s) 530
Aor13HI TCCGGA 1 cut(s) 278
Aor51HI AGCGCT 1 cut(s) 879
AoxI GGCC 9 cut(s) 3, 76, 91, 147, 292, 538, 589, 637, 669
ApeKI GCWGC 1 cut(s) 826
AspLEI GCGC 6 cut(s) 173, 197, 400, 425, 880, 900
AspS9I GGNCC 8 cut(s) 76, 81, 148, 435, 538, 589, 637, 675
AsuC2I CCSGG 6 cut(s) 303, 531, 532, 673, 729, 807
AsuHPI GGTGA 3 cut(s) 112, 397, 866
AsuNHI GCTAGC 1 cut(s) 553
AvaI CYCGRG 1 cut(s) 530
AvaII GGWCC 3 cut(s) 81, 435, 675
BaeGI GKGCMC 2 cut(s) 529, 872
BanI GGYRCC 4 cut(s) 62, 170, 524, 869
BanII GRGCYC 3 cut(s) 24, 286, 339
BbsI GAAGAC 1 cut(s) 214
BbvI GCAGC 1 cut(s) 838
BccI CCATC 4 cut(s) 43, 131, 236, 575
BceAI ACGGC 4 cut(s) 11, 182, 332, 452
BciT130I CCWGG 1 cut(s) 679
BcnI CCSGG 6 cut(s) 303, 531, 532, 673, 729, 807
BcoDI GTCTC 1 cut(s) 408
BfaI CTAG 3 cut(s) 554, 593, 702
BfoI RGCGCY 3 cut(s) 174, 881, 901
BglI GCCNNNNNGGC 2 cut(s) 306, 620
BglII AGATCT 1 cut(s) 354
BisI GCNGC 9 cut(s) 6, 9, 91, 155, 307, 369, 372, 669, 827
BlpI GCTNAGC 1 cut(s) 822
BlsI GCNGC 9 cut(s) 7, 10, 92, 156, 308, 370, 373, 670, 828
Bme1390I CCNGG 7 cut(s) 303, 531, 532, 673, 679, 729, 807
Bme18I GGWCC 3 cut(s) 81, 435, 675
BmeT110I CYCGRG 1 cut(s) 530
BmgT120I GGNCC 8 cut(s) 76, 81, 148, 435, 538, 589, 637, 675
BmiI GGNNCC 7 cut(s) 64, 172, 283, 436, 526, 676, 871
BmrFI CCNGG 7 cut(s) 303, 531, 532, 673, 679, 729, 807
BmtI GCTAGC 1 cut(s) 557
BpiI GAAGAC 1 cut(s) 214
BpmI CTGGAG 1 cut(s) 914
Bpu10I CCTNAGC 1 cut(s) 439
Bpu1102I GCTNAGC 1 cut(s) 822
BpuEI CTTGAG 1 cut(s) 827
BpuMI CCSGG 6 cut(s) 303, 531, 532, 673, 729, 807
BsaHI GRCGYC 4 cut(s) 171, 216, 249, 309
BsaJI CCNNGG 5 cut(s) 144, 301, 529, 530, 806
BsaWI WCCGGW 2 cut(s) 65, 278
BsaXI ACNNNNNCTCC 4 cut(s) 239, 260, 269, 290
Bsc4I CCNNNNNNNGG 8 cut(s) 145, 278, 407, 474, 535, 536, 678, 790
Bse118I RCCGGY 4 cut(s) 78, 107, 400, 407
Bse1I ACTGG 1 cut(s) 541
BseAI TCCGGA 1 cut(s) 278
BseBI CCWGG 1 cut(s) 679
BseDI CCNNGG 5 cut(s) 144, 301, 529, 530, 806
BseLI CCNNNNNNNGG 8 cut(s) 145, 278, 407, 474, 535, 536, 678, 790
BseMII CTCAG 1 cut(s) 836
BseNI ACTGG 1 cut(s) 541
BseRI GAGGAG 3 cut(s) 89, 254, 376
BseSI GKGCMC 2 cut(s) 529, 872
BseX3I CGGCCG 1 cut(s) 669
BseXI GCAGC 1 cut(s) 838
BseYI CCCAGC 2 cut(s) 150, 623
Bsh1236I CGCG 4 cut(s) 48, 195, 398, 425
Bsh1285I CGRYCG 3 cut(s) 393, 663, 672
BshFI GGCC 9 cut(s) 5, 78, 93, 149, 294, 540, 591, 639, 671
BshNI GGYRCC 4 cut(s) 62, 170, 524, 869
BsiEI CGRYCG 3 cut(s) 393, 663, 672
BsiHKCI CYCGRG 1 cut(s) 530
BslFI GGGAC 2 cut(s) 448, 473
BslI CCNNNNNNNGG 8 cut(s) 145, 278, 407, 474, 535, 536, 678, 790
BsmAI GTCTC 1 cut(s) 408
BsmBI CGTCTC 1 cut(s) 408
BsmFI GGGAC 2 cut(s) 448, 473
BsnI GGCC 9 cut(s) 5, 78, 93, 149, 294, 540, 591, 639, 671
BsoBI CYCGRG 1 cut(s) 530
Bsp1286I GDGCHC 5 cut(s) 24, 286, 339, 529, 872
Bsp13I TCCGGA 1 cut(s) 278
Bsp143I GATC 3 cut(s) 57, 354, 390
Bsp1720I GCTNAGC 1 cut(s) 822
BspANI GGCC 9 cut(s) 5, 78, 93, 149, 294, 540, 591, 639, 671
BspCNI CTCAG 1 cut(s) 835
BspEI TCCGGA 1 cut(s) 278
BspFNI CGCG 4 cut(s) 48, 195, 398, 425
BspLI GGNNCC 7 cut(s) 64, 172, 283, 436, 526, 676, 871
BspOI GCTAGC 1 cut(s) 557
BspPI GGATC 1 cut(s) 65
BspT107I GGYRCC 4 cut(s) 62, 170, 524, 869
BsrBI CCGCTC 1 cut(s) 255
BsrFI RCCGGY 4 cut(s) 78, 107, 400, 407
BsrI ACTGG 1 cut(s) 541
BssAI RCCGGY 4 cut(s) 78, 107, 400, 407
BssECI CCNNGG 5 cut(s) 144, 301, 529, 530, 806
BssMI GATC 3 cut(s) 57, 354, 390
BssNI GRCGYC 4 cut(s) 171, 216, 249, 309
BssT1I CCWWGG 1 cut(s) 144
Bst2UI CCWGG 1 cut(s) 679
Bst4CI ACNGT 1 cut(s) 927
Bst6I CTCTTC 1 cut(s) 707
BstACI GRCGYC 4 cut(s) 171, 216, 249, 309
BstC8I GCNNGC 5 cut(s) 24, 109, 454, 555, 798
BstDEI CTNAG 2 cut(s) 439, 822
BstEII GGTNACC 1 cut(s) 403
BstENI CCTNNNNNAGG 1 cut(s) 143
BstFNI CGCG 4 cut(s) 48, 195, 398, 425
BstH2I RGCGCY 3 cut(s) 174, 881, 901
BstHHI GCGC 6 cut(s) 173, 197, 400, 425, 880, 900
BstKTI GATC 3 cut(s) 60, 357, 393
BstMAI GTCTC 1 cut(s) 408
BstMBI GATC 3 cut(s) 57, 354, 390
BstMCI CGRYCG 3 cut(s) 393, 663, 672
BstMWI GCNNNNNNNGC 8 cut(s) 60, 179, 306, 449, 554, 620, 802, 867
BstNI CCWGG 1 cut(s) 679
BstPI GGTNACC 1 cut(s) 403
BstSCI CCNGG 7 cut(s) 301, 529, 530, 671, 677, 727, 805
BstSLI GKGCMC 2 cut(s) 529, 872
BstUI CGCG 4 cut(s) 48, 195, 398, 425
BstV1I GCAGC 1 cut(s) 838
BstV2I GAAGAC 1 cut(s) 214
BstX2I RGATCY 1 cut(s) 354
BstXI CCANNNNNNTGG 3 cut(s) 49, 623, 685
BstYI RGATCY 1 cut(s) 354
BstZI CGGCCG 1 cut(s) 669
BsuRI GGCC 9 cut(s) 5, 78, 93, 149, 294, 540, 591, 639, 671
Cac8I GCNNGC 5 cut(s) 24, 109, 454, 555, 798
CfoI GCGC 6 cut(s) 173, 197, 400, 425, 880, 900
Cfr10I RCCGGY 4 cut(s) 78, 107, 400, 407
Cfr13I GGNCC 8 cut(s) 76, 81, 148, 435, 538, 589, 637, 675
Cfr9I CCCGGG 1 cut(s) 530
CseI GACGC 2 cut(s) 298, 404
CviAII CATG 9 cut(s) 73, 85, 322, 502, 520, 604, 695, 790, 851
DdeI CTNAG 2 cut(s) 439, 822
DinI GGCGCC 1 cut(s) 172
DpnI GATC 3 cut(s) 59, 356, 392
DpnII GATC 3 cut(s) 57, 354, 390
DraIII CACNNNGTG 1 cut(s) 751
DrdI GACNNNNNNGTC 2 cut(s) 401, 467
DseDI GACNNNNNNGTC 2 cut(s) 401, 467
EaeI YGGCCR 3 cut(s) 3, 91, 669
EagI CGGCCG 1 cut(s) 669
Eam1104I CTCTTC 1 cut(s) 707
EarI CTCTTC 1 cut(s) 707
EciI GGCGGA 3 cut(s) 287, 355, 426
EclXI CGGCCG 1 cut(s) 669
Eco130I CCWWGG 1 cut(s) 144
Eco24I GRGCYC 3 cut(s) 24, 286, 339
Eco47I GGWCC 3 cut(s) 81, 435, 675
Eco47III AGCGCT 1 cut(s) 879
Eco52I CGGCCG 1 cut(s) 669
Eco57I CTGAAG 1 cut(s) 731
Eco88I CYCGRG 1 cut(s) 530
Eco91I GGTNACC 1 cut(s) 403
EcoNI CCTNNNNNAGG 1 cut(s) 143
EcoO109I RGGNCCY 1 cut(s) 435
EcoO65I GGTNACC 1 cut(s) 403
EcoRII CCWGG 1 cut(s) 677
EcoT14I CCWWGG 1 cut(s) 144
EcoT22I ATGCAT 1 cut(s) 696
EcoT38I GRGCYC 3 cut(s) 24, 286, 339
EgeI GGCGCC 1 cut(s) 172
EheI GGCGCC 1 cut(s) 172
ErhI CCWWGG 1 cut(s) 144
Esp3I CGTCTC 1 cut(s) 408
FaeI CATG 9 cut(s) 76, 88, 325, 505, 523, 607, 698, 793, 854
FaqI GGGAC 2 cut(s) 448, 473
FatI CATG 9 cut(s) 72, 84, 321, 501, 519, 603, 694, 789, 850
FauI CCCGC 4 cut(s) 31, 53, 445, 449
FauNDI CATATG 1 cut(s) 572
FblI GTMKAC 1 cut(s) 318
Fnu4HI GCNGC 9 cut(s) 6, 9, 91, 155, 307, 369, 372, 669, 827
FriOI GRGCYC 3 cut(s) 24, 286, 339
Fsp4HI GCNGC 9 cut(s) 6, 9, 91, 155, 307, 369, 372, 669, 827
FspBI CTAG 3 cut(s) 554, 593, 702
GlaI GCGC 6 cut(s) 172, 196, 399, 424, 879, 899
GluI GCNGC 9 cut(s) 6, 9, 91, 155, 307, 369, 372, 669, 827
GsaI CCCAGC 2 cut(s) 154, 627
GsuI CTGGAG 1 cut(s) 914
HaeII RGCGCY 3 cut(s) 174, 881, 901
HaeIII GGCC 9 cut(s) 5, 78, 93, 149, 294, 540, 591, 639, 671
HgaI GACGC 2 cut(s) 298, 404
HhaI GCGC 6 cut(s) 173, 197, 400, 425, 880, 900
Hin1I GRCGYC 4 cut(s) 171, 216, 249, 309
Hin1II CATG 9 cut(s) 76, 88, 325, 505, 523, 607, 698, 793, 854
Hin6I GCGC 6 cut(s) 171, 195, 398, 423, 878, 898
HinP1I GCGC 6 cut(s) 171, 195, 398, 423, 878, 898
HincII GTYRAC 2 cut(s) 319, 936
HindII GTYRAC 2 cut(s) 319, 936
HinfI GANTC 7 cut(s) 69, 185, 445, 484, 706, 732, 742
HphI GGTGA 3 cut(s) 112, 397, 866
Hpy166II GTNNAC 2 cut(s) 319, 936
Hpy188I TCNGA 4 cut(s) 214, 247, 334, 711
Hpy188III TCNNGA 5 cut(s) 161, 279, 352, 646, 893
Hpy8I GTNNAC 2 cut(s) 319, 936
Hpy99I CGWCG 9 cut(s) 203, 218, 221, 236, 251, 320, 353, 398, 473
HpyAV CCTTC 5 cut(s) 529, 593, 643, 748, 769
HpyCH4III ACNGT 1 cut(s) 927
HpyCH4IV ACGT 3 cut(s) 216, 249, 417
HpyCH4V TGCA 2 cut(s) 548, 694
HpyF10VI GCNNNNNNNGC 8 cut(s) 60, 179, 306, 449, 554, 620, 802, 867
HpyF3I CTNAG 2 cut(s) 439, 822
HpySE526I ACGT 3 cut(s) 216, 249, 417
Hsp92I GRCGYC 4 cut(s) 171, 216, 249, 309
Hsp92II CATG 9 cut(s) 76, 88, 325, 505, 523, 607, 698, 793, 854
HspAI GCGC 6 cut(s) 171, 195, 398, 423, 878, 898
KasI GGCGCC 1 cut(s) 170
Kpn2I TCCGGA 1 cut(s) 278
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Kzo9I GATC 3 cut(s) 57, 354, 390
LmnI GCTCC 5 cut(s) 260, 281, 389, 698, 895
Lsp1109I GCAGC 1 cut(s) 838
MaeI CTAG 3 cut(s) 554, 593, 702
MaeII ACGT 3 cut(s) 216, 249, 417
MaeIII GTNAC 3 cut(s) 403, 837, 912
MalI GATC 3 cut(s) 59, 356, 392
MbiI CCGCTC 1 cut(s) 255
MboI GATC 3 cut(s) 57, 354, 390
MboII GAAGA 3 cut(s) 118, 214, 724
MflI RGATCY 1 cut(s) 354
MhlI GDGCHC 5 cut(s) 24, 286, 339, 529, 872
MluCI AATT 2 cut(s) 514, 862
Mly113I GGCGCC 1 cut(s) 171
MlyI GAGTC 1 cut(s) 78
MmeI TCCRAC 3 cut(s) 237, 270, 666
Mph1103I ATGCAT 1 cut(s) 696
MroI TCCGGA 1 cut(s) 278
MroNI GCCGGC 1 cut(s) 107
MseI TTAA 1 cut(s) 513
MslI CAYNNNNRTG 1 cut(s) 47
MspR9I CCNGG 7 cut(s) 303, 531, 532, 673, 679, 729, 807
MvaI CCWGG 1 cut(s) 679
MvnI CGCG 4 cut(s) 48, 195, 398, 425
MwoI GCNNNNNNNGC 8 cut(s) 60, 179, 306, 449, 554, 620, 802, 867
NaeI GCCGGC 1 cut(s) 109
NarI GGCGCC 1 cut(s) 171
NciI CCSGG 6 cut(s) 303, 531, 532, 673, 729, 807
NdeI CATATG 1 cut(s) 572
NdeII GATC 3 cut(s) 57, 354, 390
NgoMIV GCCGGC 1 cut(s) 107
NheI GCTAGC 1 cut(s) 553
NlaIII CATG 9 cut(s) 76, 88, 325, 505, 523, 607, 698, 793, 854
NlaIV GGNNCC 7 cut(s) 64, 172, 283, 436, 526, 676, 871
NmuCI GTSAC 3 cut(s) 403, 837, 912
NsiI ATGCAT 1 cut(s) 696
OliI CACNNNNGTG 1 cut(s) 47
PcsI WCGNNNNNNNCGW 2 cut(s) 255, 468
PdiI GCCGGC 1 cut(s) 109
PfeI GAWTC 6 cut(s) 185, 445, 484, 706, 732, 742
PflFI GACNNNGTC 1 cut(s) 218
PflMI CCANNNNNTGG 1 cut(s) 790
PkrI GCNGC 9 cut(s) 7, 10, 92, 156, 308, 370, 373, 670, 828
Ple19I CGATCG 1 cut(s) 393
PleI GAGTC 1 cut(s) 77
PluTI GGCGCC 1 cut(s) 174
PpsI GAGTC 1 cut(s) 77
PpuMI RGGWCCY 1 cut(s) 435
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 1 cut(s) 677
PspEI GGTNACC 1 cut(s) 403
PspFI CCCAGC 2 cut(s) 150, 623
PspGI CCWGG 1 cut(s) 677
PspN4I GGNNCC 7 cut(s) 64, 172, 283, 436, 526, 676, 871
PspPI GGNCC 8 cut(s) 76, 81, 148, 435, 538, 589, 637, 675
PspPPI RGGWCCY 1 cut(s) 435
PsuI RGATCY 1 cut(s) 354
PsyI GACNNNGTC 1 cut(s) 218
PvuI CGATCG 1 cut(s) 393
RseI CAYNNNNRTG 1 cut(s) 47
SalI GTCGAC 1 cut(s) 317
SaqAI TTAA 1 cut(s) 513
SatI GCNGC 9 cut(s) 6, 9, 91, 155, 307, 369, 372, 669, 827
Sau3AI GATC 3 cut(s) 57, 354, 390
Sau96I GGNCC 8 cut(s) 76, 81, 148, 435, 538, 589, 637, 675
SchI GAGTC 1 cut(s) 78
ScrFI CCNGG 7 cut(s) 303, 531, 532, 673, 679, 729, 807
SduI GDGCHC 5 cut(s) 24, 286, 339, 529, 872
SfoI GGCGCC 1 cut(s) 172
SgrAI CRCCGGYG 1 cut(s) 407
SinI GGWCC 3 cut(s) 81, 435, 675
SmaI CCCGGG 1 cut(s) 532
SmiMI CAYNNNNRTG 1 cut(s) 47
SmlI CTYRAG 1 cut(s) 842
SmoI CTYRAG 1 cut(s) 842
Sse9I AATT 2 cut(s) 514, 862
SspDI GGCGCC 1 cut(s) 170
SspMI CTAG 3 cut(s) 554, 593, 702
StyD4I CCNGG 7 cut(s) 301, 529, 530, 671, 677, 727, 805
StyI CCWWGG 1 cut(s) 144
TaaI ACNGT 1 cut(s) 927
TaiI ACGT 3 cut(s) 219, 252, 420
TaqI TCGA 7 cut(s) 162, 267, 318, 351, 389, 393, 723
TaqII GACCGA 1 cut(s) 649
TasI AATT 2 cut(s) 514, 862
TauI GCSGC 8 cut(s) 8, 11, 93, 157, 309, 371, 374, 671
TfiI GAWTC 6 cut(s) 185, 445, 484, 706, 732, 742
Tru1I TTAA 1 cut(s) 513
Tru9I TTAA 1 cut(s) 513
TseFI GTSAC 3 cut(s) 403, 837, 912
TseI GCWGC 1 cut(s) 826
Tsp45I GTSAC 3 cut(s) 403, 837, 912
TspGWI ACGGA 1 cut(s) 247
TspMI CCCGGG 1 cut(s) 530
Tth111I GACNNNGTC 1 cut(s) 218
Van91I CCANNNNNTGG 1 cut(s) 790
VpaK11BI GGWCC 3 cut(s) 81, 435, 675
XagI CCTNNNNNAGG 1 cut(s) 143
XmaI CCCGGG 1 cut(s) 530
XmiI GTMKAC 1 cut(s) 318
XspI CTAG 3 cut(s) 554, 593, 702
ZraI GACGTC 2 cut(s) 217, 250
Zsp2I ATGCAT 1 cut(s) 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.