CCR4-associated factor 1 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g01160 FvH4_1g01160 |
| malus_domestica | MD02G1009600.v1.1 |
| prunus_persica | Prupe.7G260400_v2.0.a1 |
| pyrus_communis | pycom15g13870 |
| rosa_chinensis | RchiOBHm_Chr2g0085951 |
| rosa_laevigata | RLG00000015729 |
| rosa_roxburghii | Rroxscaffold_2G00154900 |
| rosa_rugosa | Rorug01G0464600 |
| rosa_samantha | Rh2AG013800 Rh2BG014300 Rh2CG014800 Rh2DG016100 |
| rosa_wichuraiana | Rw2G001220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 180 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 196 |
| Acc36I | ACCTGC | 1 cut(s) | 533 |
| AccI | GTMKAC | 2 cut(s) | 93, 207 |
| AciI | CCGC | 1 cut(s) | 372 |
| AfaI | GTAC | 2 cut(s) | 287, 578 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 272 |
| AflII | CTTAAG | 1 cut(s) | 194 |
| AgsI | TTSAA | 6 cut(s) | 16, 74, 163, 217, 643, 739 |
| AluBI | AGCT | 8 cut(s) | 113, 229, 262, 430, 517, 649, 658, 695 |
| AluI | AGCT | 8 cut(s) | 113, 229, 262, 430, 517, 649, 658, 695 |
| Alw26I | GTCTC | 2 cut(s) | 239, 765 |
| ApeKI | GCWGC | 2 cut(s) | 262, 517 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 78 |
| AsuC2I | CCSGG | 1 cut(s) | 132 |
| AsuHPI | GGTGA | 3 cut(s) | 487, 680, 706 |
| BbvI | GCAGC | 2 cut(s) | 249, 504 |
| BccI | CCATC | 1 cut(s) | 800 |
| BciVI | GTATCC | 1 cut(s) | 112 |
| BclI | TGATCA | 1 cut(s) | 567 |
| BcnI | CCSGG | 1 cut(s) | 132 |
| BcoDI | GTCTC | 2 cut(s) | 239, 765 |
| BfrI | CTTAAG | 1 cut(s) | 194 |
| BfuAI | ACCTGC | 1 cut(s) | 533 |
| BfuI | GTATCC | 1 cut(s) | 112 |
| BisI | GCNGC | 2 cut(s) | 263, 518 |
| BlsI | GCNGC | 2 cut(s) | 264, 519 |
| BmcAI | AGTACT | 1 cut(s) | 287 |
| Bme1390I | CCNGG | 1 cut(s) | 132 |
| BmrFI | CCNGG | 1 cut(s) | 132 |
| BmsI | GCATC | 2 cut(s) | 400, 613 |
| BpuEI | CTTGAG | 1 cut(s) | 497 |
| BpuMI | CCSGG | 1 cut(s) | 132 |
| BsaI | GGTCTC | 2 cut(s) | 239, 765 |
| BsaJI | CCNNGG | 1 cut(s) | 150 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 272 |
| Bse1I | ACTGG | 1 cut(s) | 717 |
| BseDI | CCNNGG | 1 cut(s) | 150 |
| BseGI | GGATG | 2 cut(s) | 253, 811 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 272 |
| BseMII | CTCAG | 2 cut(s) | 417, 756 |
| BseNI | ACTGG | 1 cut(s) | 717 |
| BseXI | GCAGC | 2 cut(s) | 249, 504 |
| BseYI | CCCAGC | 1 cut(s) | 229 |
| BsiSI | CCGG | 1 cut(s) | 131 |
| BslFI | GGGAC | 3 cut(s) | 132, 169, 349 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 272 |
| BsmAI | GTCTC | 2 cut(s) | 239, 765 |
| BsmFI | GGGAC | 3 cut(s) | 132, 169, 349 |
| Bso31I | GGTCTC | 2 cut(s) | 239, 765 |
| Bsp143I | GATC | 2 cut(s) | 300, 567 |
| BspACI | CCGC | 1 cut(s) | 372 |
| BspCNI | CTCAG | 2 cut(s) | 418, 757 |
| BspHI | TCATGA | 1 cut(s) | 729 |
| BspMI | ACCTGC | 1 cut(s) | 533 |
| BspTI | CTTAAG | 1 cut(s) | 194 |
| BspTNI | GGTCTC | 2 cut(s) | 239, 765 |
| BsrI | ACTGG | 1 cut(s) | 717 |
| BssECI | CCNNGG | 1 cut(s) | 150 |
| BssMI | GATC | 2 cut(s) | 300, 567 |
| BssT1I | CCWWGG | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 2 cut(s) | 170, 290 |
| Bst6I | CTCTTC | 1 cut(s) | 11 |
| BstAFI | CTTAAG | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 1 cut(s) | 651 |
| BstDEI | CTNAG | 2 cut(s) | 426, 765 |
| BstF5I | GGATG | 2 cut(s) | 253, 811 |
| BstKTI | GATC | 2 cut(s) | 303, 570 |
| BstMAI | GTCTC | 2 cut(s) | 239, 765 |
| BstMBI | GATC | 2 cut(s) | 300, 567 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 517, 655 |
| BstSCI | CCNGG | 1 cut(s) | 130 |
| BstV1I | GCAGC | 2 cut(s) | 249, 504 |
| BsuI | GTATCC | 1 cut(s) | 112 |
| BtsCI | GGATG | 2 cut(s) | 253, 811 |
| BtsIMutI | CAGTG | 1 cut(s) | 423 |
| BveI | ACCTGC | 1 cut(s) | 533 |
| Cac8I | GCNNGC | 1 cut(s) | 651 |
| CciI | TCATGA | 1 cut(s) | 729 |
| CseI | GACGC | 1 cut(s) | 134 |
| Csp6I | GTAC | 2 cut(s) | 286, 577 |
| CviAII | CATG | 2 cut(s) | 632, 730 |
| CviQI | GTAC | 2 cut(s) | 286, 577 |
| DdeI | CTNAG | 2 cut(s) | 426, 765 |
| DpnI | GATC | 2 cut(s) | 302, 569 |
| DpnII | GATC | 2 cut(s) | 300, 567 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 196 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 196 |
| Eam1104I | CTCTTC | 1 cut(s) | 11 |
| EarI | CTCTTC | 1 cut(s) | 11 |
| Eco130I | CCWWGG | 1 cut(s) | 150 |
| Eco31I | GGTCTC | 2 cut(s) | 239, 765 |
| EcoT14I | CCWWGG | 1 cut(s) | 150 |
| ErhI | CCWWGG | 1 cut(s) | 150 |
| FaeI | CATG | 2 cut(s) | 635, 733 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 734, 766 |
| FaqI | GGGAC | 3 cut(s) | 132, 169, 349 |
| FatI | CATG | 2 cut(s) | 631, 729 |
| FbaI | TGATCA | 1 cut(s) | 567 |
| FblI | GTMKAC | 2 cut(s) | 93, 207 |
| Fnu4HI | GCNGC | 2 cut(s) | 263, 518 |
| FokI | GGATG | 2 cut(s) | 260, 818 |
| Fsp4HI | GCNGC | 2 cut(s) | 263, 518 |
| GluI | GCNGC | 2 cut(s) | 263, 518 |
| GsaI | CCCAGC | 1 cut(s) | 233 |
| HapII | CCGG | 1 cut(s) | 131 |
| HgaI | GACGC | 1 cut(s) | 134 |
| Hin1II | CATG | 2 cut(s) | 635, 733 |
| HinfI | GANTC | 6 cut(s) | 23, 79, 223, 347, 542, 815 |
| HpaII | CCGG | 1 cut(s) | 131 |
| HphI | GGTGA | 3 cut(s) | 487, 680, 706 |
| Hpy166II | GTNNAC | 5 cut(s) | 31, 94, 208, 423, 710 |
| Hpy188I | TCNGA | 5 cut(s) | 84, 189, 247, 609, 703 |
| Hpy188III | TCNNGA | 6 cut(s) | 59, 163, 539, 583, 730, 764 |
| Hpy8I | GTNNAC | 5 cut(s) | 31, 94, 208, 423, 710 |
| Hpy99I | CGWCG | 1 cut(s) | 589 |
| HpyAV | CCTTC | 4 cut(s) | 394, 545, 638, 736 |
| HpyCH4III | ACNGT | 2 cut(s) | 170, 290 |
| HpyCH4IV | ACGT | 1 cut(s) | 239 |
| HpyCH4V | TGCA | 2 cut(s) | 528, 621 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 517, 655 |
| HpyF3I | CTNAG | 2 cut(s) | 426, 765 |
| HpySE526I | ACGT | 1 cut(s) | 239 |
| Hsp92II | CATG | 2 cut(s) | 635, 733 |
| Ksp22I | TGATCA | 1 cut(s) | 567 |
| Kzo9I | GATC | 2 cut(s) | 300, 567 |
| Lsp1109I | GCAGC | 2 cut(s) | 249, 504 |
| LweI | GCATC | 2 cut(s) | 400, 613 |
| MaeII | ACGT | 1 cut(s) | 239 |
| MaeIII | GTNAC | 1 cut(s) | 475 |
| MalI | GATC | 2 cut(s) | 302, 569 |
| MboI | GATC | 2 cut(s) | 300, 567 |
| MboII | GAAGA | 1 cut(s) | 28 |
| MluCI | AATT | 5 cut(s) | 74, 181, 304, 571, 734 |
| MlyI | GAGTC | 1 cut(s) | 551 |
| MnlI | CCTC | 4 cut(s) | 322, 451, 606, 796 |
| MroXI | GAANNNNTTC | 1 cut(s) | 78 |
| MseI | TTAA | 4 cut(s) | 195, 318, 324, 600 |
| MspA1I | CMGCKG | 2 cut(s) | 229, 372 |
| MspCI | CTTAAG | 1 cut(s) | 194 |
| MspI | CCGG | 1 cut(s) | 131 |
| MspR9I | CCNGG | 1 cut(s) | 132 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 517, 655 |
| NciI | CCSGG | 1 cut(s) | 132 |
| NdeII | GATC | 2 cut(s) | 300, 567 |
| NlaIII | CATG | 2 cut(s) | 635, 733 |
| NmuCI | GTSAC | 1 cut(s) | 475 |
| PagI | TCATGA | 1 cut(s) | 729 |
| PdmI | GAANNNNTTC | 1 cut(s) | 78 |
| PfeI | GAWTC | 5 cut(s) | 23, 79, 223, 347, 815 |
| PkrI | GCNGC | 2 cut(s) | 264, 519 |
| PleI | GAGTC | 1 cut(s) | 550 |
| PpsI | GAGTC | 1 cut(s) | 550 |
| PsiI | TTATAA | 1 cut(s) | 180 |
| PspFI | CCCAGC | 1 cut(s) | 229 |
| PvuII | CAGCTG | 1 cut(s) | 229 |
| RsaI | GTAC | 2 cut(s) | 287, 578 |
| RsaNI | GTAC | 2 cut(s) | 286, 577 |
| SaqAI | TTAA | 4 cut(s) | 195, 318, 324, 600 |
| SatI | GCNGC | 2 cut(s) | 263, 518 |
| Sau3AI | GATC | 2 cut(s) | 300, 567 |
| ScaI | AGTACT | 1 cut(s) | 287 |
| SchI | GAGTC | 1 cut(s) | 551 |
| ScrFI | CCNGG | 1 cut(s) | 132 |
| SfaNI | GCATC | 2 cut(s) | 400, 613 |
| SmlI | CTYRAG | 2 cut(s) | 194, 512 |
| SmoI | CTYRAG | 2 cut(s) | 194, 512 |
| Sse9I | AATT | 5 cut(s) | 74, 181, 304, 571, 734 |
| SsiI | CCGC | 1 cut(s) | 372 |
| StyD4I | CCNGG | 1 cut(s) | 130 |
| StyI | CCWWGG | 1 cut(s) | 150 |
| TaaI | ACNGT | 2 cut(s) | 170, 290 |
| TaiI | ACGT | 1 cut(s) | 242 |
| TaqI | TCGA | 2 cut(s) | 350, 408 |
| TasI | AATT | 5 cut(s) | 74, 181, 304, 571, 734 |
| TatI | WGTACW | 2 cut(s) | 285, 576 |
| TfiI | GAWTC | 5 cut(s) | 23, 79, 223, 347, 815 |
| Tru1I | TTAA | 4 cut(s) | 195, 318, 324, 600 |
| Tru9I | TTAA | 4 cut(s) | 195, 318, 324, 600 |
| TscAI | CASTG | 1 cut(s) | 430 |
| TseFI | GTSAC | 1 cut(s) | 475 |
| TseI | GCWGC | 2 cut(s) | 262, 517 |
| Tsp45I | GTSAC | 1 cut(s) | 475 |
| TspDTI | ATGAA | 4 cut(s) | 474, 620, 718, 746 |
| TspRI | CASTG | 1 cut(s) | 430 |
| Vha464I | CTTAAG | 1 cut(s) | 194 |
| XmiI | GTMKAC | 2 cut(s) | 93, 207 |
| XmnI | GAANNNNTTC | 1 cut(s) | 78 |
| ZrmI | AGTACT | 1 cut(s) | 287 |