pentatricopeptide repeat-containing protein At5g06400
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0450911 |
| rosa_multiflora | Rmu_sc0002621.1_g000011 Rmu_sc0002899.1_g000003 |
| rosa_roxburghii | Rroxscaffold_3G00224570 |
| rosa_samantha | Rh1AG112200 Rh1DG117600 Rh3BG033200 Rh3BG134300 Rh3DG033000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 44 |
| AgsI | TTSAA | 2 cut(s) | 139, 188 |
| AluBI | AGCT | 1 cut(s) | 133 |
| AluI | AGCT | 1 cut(s) | 133 |
| ApeKI | GCWGC | 2 cut(s) | 127, 130 |
| BbvI | GCAGC | 2 cut(s) | 139, 142 |
| BfaI | CTAG | 1 cut(s) | 53 |
| BisI | GCNGC | 2 cut(s) | 128, 131 |
| BlsI | GCNGC | 2 cut(s) | 129, 132 |
| BseXI | GCAGC | 2 cut(s) | 139, 142 |
| BspQI | GCTCTTC | 1 cut(s) | 140 |
| Bst6I | CTCTTC | 1 cut(s) | 140 |
| BstV1I | GCAGC | 2 cut(s) | 139, 142 |
| CseI | GACGC | 1 cut(s) | 133 |
| CviJI | RGCY | 2 cut(s) | 133, 162 |
| CviKI_1 | RGCY | 2 cut(s) | 133, 162 |
| Eam1104I | CTCTTC | 1 cut(s) | 140 |
| EarI | CTCTTC | 1 cut(s) | 140 |
| FaiI | YATR | 7 cut(s) | 36, 44, 64, 72, 77, 174, 182 |
| Fnu4HI | GCNGC | 2 cut(s) | 128, 131 |
| Fsp4HI | GCNGC | 2 cut(s) | 128, 131 |
| FspBI | CTAG | 1 cut(s) | 53 |
| FspEI | CC | 9 cut(s) | 21, 22, 72, 111, 124, 130, 144, 177, 182 |
| GluI | GCNGC | 2 cut(s) | 128, 131 |
| HgaI | GACGC | 1 cut(s) | 133 |
| HinfI | GANTC | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 1 cut(s) | 156 |
| Hpy188III | TCNNGA | 2 cut(s) | 53, 87 |
| LguI | GCTCTTC | 1 cut(s) | 140 |
| LpnPI | CCDG | 2 cut(s) | 72, 182 |
| Lsp1109I | GCAGC | 2 cut(s) | 139, 142 |
| MaeI | CTAG | 1 cut(s) | 53 |
| MaeIII | GTNAC | 1 cut(s) | 164 |
| MboII | GAAGA | 2 cut(s) | 16, 127 |
| MnlI | CCTC | 1 cut(s) | 185 |
| NmuCI | GTSAC | 1 cut(s) | 164 |
| PciSI | GCTCTTC | 1 cut(s) | 140 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PkrI | GCNGC | 2 cut(s) | 129, 132 |
| PsiI | TTATAA | 1 cut(s) | 44 |
| SapI | GCTCTTC | 1 cut(s) | 140 |
| SatI | GCNGC | 2 cut(s) | 128, 131 |
| SetI | ASST | 3 cut(s) | 113, 135, 171 |
| SgeI | CNNG | 4 cut(s) | 65, 99, 181, 197 |
| SspMI | CTAG | 1 cut(s) | 53 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| TseFI | GTSAC | 1 cut(s) | 164 |
| TseI | GCWGC | 2 cut(s) | 127, 130 |
| Tsp45I | GTSAC | 1 cut(s) | 164 |
| TspDTI | ATGAA | 2 cut(s) | 17, 92 |
| XbaI | TCTAGA | 1 cut(s) | 52 |
| XspI | CTAG | 1 cut(s) | 53 |