Rroxscaffold_3G00257810

N-terminal C2 in EEIG1 and EHBP1 proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0007404
Physical Location & Seq
Forward (+)
52100328 .. 52104700
4373 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00257810.1

Sequence Viewer

Length: 3027 bp
ATGTTCAAGTCGGCGAGATGGAGAAGCGACAAGAACAAGATCAAGACTCTGTTCAAATTGCAGTTTCATGCAACTCAGGTGCCAAAATTGGGTGTGGAGGCATTGATGGTATCTGTGATTCCTGGAGATGTGGGAAAGCCAACTGTGAAATTAGATAAAGCTGTGGTTCGAGATGGGAGCTGTAAATGGGAAAATCCGGTTTATGAAACTGTTAAATTCGACCAGGAGCCAAGAACCGGGAAGATCAAGGAGAGACTCTATAGTTTTGTTCTTTCAACTGGATCTTCTAAAGCAAGTGTTCTTGGGGAGGTTTCTGTTGATTTTGCCGAGTATTCTGAGGCTACTAAAGCTTCCTCTGTGTCTCTTCCTCTTAAGAATTCAAGTGCAGTATTGCATGTTTCGATTCAAAAGTTACAGGCAAATGTTGATCAGAGAGAGGTAGAAGGCTGTGAAGATGCCAAAGTTAAATCTCAGGATAATAGCTTGAAGAGACACTTGAGCAATAATGATGCAGATGAAAGCGTTTTAGTGGATGAGACGATCAATAGGACCACTCAAAATGCTGAGTGCAACCGCACAGCCTCTATTGGATCAGACATTACATTGTCCAGTTCTGACAGCAGCTCTGGACTTGATACTTCTCGAGAGCTTGTACTAAGAAACATGAACAATTGTCACGACCCTTCCAACTATCTGTCATCACCAAATCAGCCCTCAATACCACACAGACCTGGTATCTATGGCTCGACAAATAATGAGCAACAGCAATCACAGTGGGAGTGGTCTGCAGATTCTGAACATGGAACAAGCGGACATGTCAGAGTTAGAGTTACAAACACTAAGGAAGCAGATAGTAAAAGAGAACAAAAGGGGCATGATCTTTCAAGAGAAGTCCTTAGCTTGAAAGAGGAACGAGATGCTTTCAAGGCTGAATGTGAGAAGCTAAAAGCCTTTCAGTATCGGATGGATGATACAAAAACAAAAAACAGGTTCCAGTTAGAAGGTGGGGATCTGCGGGCTCTTGTTGATGAAATCAGACAAGAACTCAGCTGTGAGAAGGACCTGAATAACAATCTTCGGTTACAGCTCCAGAAGACCCAAGAGTCAAATGCTGAGTTGATTCTTGCTGTACGAGACCTGGAGGAAATATTGGAGCACAAGAATGGTGAAGCTGCCAATTCCAACAGATCAGAATCCACAAATGATGCTGCAGGTTCGAGAGCAACCAACTCAAATGATGTGGAAACTGAGGATGAGGAGCTGAAGGAACTGGAGGATCTTGTTAAGGAGCACAGCCATGCCAAGGATACACACCTGCTGGAGAAACAGATTACAGACCTCTATAATGAATTAGAGATCTATAAGAGAGACAGAGATGAGCTTGAGATGCAAATGGAGCAGCTTGCTCTTGACTATGAGATATTGAAACAAGAAAACCATGACATCTCATATAAGCTAGAGCAAAGCACACTGCAAGAACAACTCAAGATGCAGTATGAATGCTCATCTCCCACTGCTAGCGTAAATGAGCTTCATTACCAAATTGAGGATCTAGAAACAGAATTGAAGAAGCAGGCTGAAGATTTTTCTAATTCGTTGGCTACCATAAAGGAACTTCAATCTCACATCAAAAGTATGGAGGAAGAACTAGAGAAGCAGGCACAAGGATTTGAAGCTGATTTAGAAACTGTAACATGTGCTAAAGTTGAGCAGGAGCAAAGAGCCATCCGAGCAGAAGAGGCACTGCGGAAAACTAGATTGAAAAATGCGAATACAGCTGAGAGGCTTCAGGAGGAATTTAGACGACTTTCTTCACAAATGGCCTCCACATTTGATGCGAATGAGAAGGTAGCAATGAAAGCAATGACAGAAGCGAGTGAACTGGGTGCACAGAAGAGTCACCTTGAAGAATTGCTCAAGAAAACTAAGGAAGAGCTCCAGGCAAGTAGGGAGGAGTATGAGGCAAAATTGCAGAAACTTTCCAACGAACTGGATGAGAAAACCAGAGAGATGGAACAGATGTTATTGGAAATCCAGAATAAGTCCATGCAGCTTGAAGATCAGCAGAAGCAAGAGGGAGATTTCTCTGAGGTGATATTACAGCTCAAAGTTGAGATTGAAAGGCTTACAAGAGAAAATAACAGTCTTTCAGAGAAAGTAGAGCAAAACAAAAATTTGAGTGCTGAGTTGGAGAAAATGAAGAAATCAATTGAGGAAACTGAGATGCTGATTCAAAGAGGAAATATAGAAAGGAATGAGTTGGTGAGTACAACTGATCTGCTGAAGAAGGAAGCAGAGAAGTCATTGGAGAAGTTGAATAAAATGAAGTATCTTATGGATGAAAAAGAGGCAACCATTCGACGCTTACAATTGGAGTCTGACCAGCTGAAAGCTCAGTGTAATGACTTGAGACATACTCTCTCTGAGGATGAGGTAGAGAAAGGAAGTCTTAAAAGGCAGGTATTTGATCTTAAGGCTGATCTGAAGAAGAAGGAGGATGCACTCACTACTATTGAAAAGAAGCTCAAGGATAGCAATGGACGAACAATAGTTTCAGATGGAGCTAAACATAACCTGAGAAACAATAAGTCTCTGCCTGTTCCTCGTGCCACAAAAGAAGTTGCAAGTCTGAGGGAGAGAATAAAACTGCTGGAGGGACAAATAAAGTTAAAGGAAGCTGCTTTGGAAAGCTCAACTGCTTCTTTTCTGCAGAAGGAAAAGGATCTTCAGAACGTAATCGAAGAGTTGGAAAACAGGGTGGAAGAAATCAATCAAAACTGTGCATTTGAACAGGATATTACTTCAAAAGATAATATGCTTGAAGAAGTGAGGCGACTGTCTGATAACTTATCAACTGAATTGGCATCACTAAAGGAGAGAAATATGTCAATGGAAAGTGAACTAAAAGAGATGCAGGAGAGATATTCAGAGATAAGTCTCAAATTTGCAGAGGTAGAAGGTGAAAGACAACAGCTTGTAATGACGTTCAAACAACTGGGTATGCCCACTGGAGAAATCAAGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04530 map04530
Pfam Domains
Protein Families
NT-C2

Protein Analysis

1008

Amino Acids

115.36

Weight (kDa)

5.12

Isoelectric Point (pI)

46.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NT-C2 PF10358 11 - 143 9.6e-22 N-terminal C2 in EEIG1 and EHBP1 proteins
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1323
AasI GACNNNNNNGTC 1 cut(s) 1102
Acc36I ACCTGC 3 cut(s) 1202, 1323, 2449
AccB1I GGYRCC 1 cut(s) 79
AciI CCGC 4 cut(s) 574, 810, 1015, 1747
AclWI GGATC 6 cut(s) 289, 598, 1017, 1284, 1557, 2730
AcsI RAATTY 5 cut(s) 215, 376, 1796, 2173, 2942
AcuI CTGAAG 6 cut(s) 1283, 1599, 1772, 2303, 2504, 2711
AfaI GTAC 3 cut(s) 654, 1131, 2269
AfiI CCNNNNNNNGG 4 cut(s) 89, 236, 1303, 1546
AflII CTTAAG 2 cut(s) 371, 2471
AflIII ACRYGT 2 cut(s) 814, 1694
AjnI CCWGG 5 cut(s) 121, 222, 730, 1137, 1938
Alw21I GWGCWC 4 cut(s) 1158, 1293, 1891, 1938
Alw26I GTCTC 9 cut(s) 247, 366, 484, 530, 1128, 1362, 2404, 2595, 2942
Alw44I GTGCAC 1 cut(s) 1887
AlwI GGATC 6 cut(s) 289, 598, 1017, 1284, 1557, 2730
AlwNI CAGNNNCTG 1 cut(s) 794
Ama87I CYCGRG 1 cut(s) 642
AoxI GGCC 1 cut(s) 1821
ApaLI GTGCAC 1 cut(s) 1887
ApeKI GCWGC 6 cut(s) 621, 1172, 1208, 1399, 2050, 2678
ApoI RAATTY 5 cut(s) 215, 376, 1796, 2173, 2942
AspS9I GGNCC 2 cut(s) 549, 1060
AsuC2I CCSGG 1 cut(s) 238
AsuHPI GGTGA 6 cut(s) 693, 1178, 1892, 2104, 2275, 2972
AsuNHI GCTAGC 1 cut(s) 1517
AvaI CYCGRG 1 cut(s) 642
AvaII GGWCC 2 cut(s) 549, 1060
BaeGI GKGCMC 1 cut(s) 1891
BanI GGYRCC 1 cut(s) 79
BanII GRGCYC 2 cut(s) 1021, 1938
BarI GAAGNNNNNNTAC 2 cut(s) 1515, 1547
BauI CACGAG 1 cut(s) 2604
BbsI GAAGAC 1 cut(s) 1100
Bbv12I GWGCWC 4 cut(s) 1158, 1293, 1891, 1938
BbvI GCAGC 6 cut(s) 633, 1159, 1195, 1411, 2062, 2665
BccI CCATC 7 cut(s) 12, 100, 167, 958, 1733, 2005, 2552
BciT130I CCWGG 5 cut(s) 123, 224, 732, 1139, 1940
BciVI GTATCC 1 cut(s) 1300
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 1 cut(s) 238
BcoDI GTCTC 9 cut(s) 247, 366, 484, 530, 1128, 1362, 2404, 2595, 2942
BfaI CTAG 5 cut(s) 1457, 1518, 1553, 1649, 1755
BfmI CTRYAG 4 cut(s) 259, 786, 1209, 2708
BfrI CTTAAG 2 cut(s) 371, 2471
BfuAI ACCTGC 3 cut(s) 1202, 1323, 2449
BfuI GTATCC 1 cut(s) 1300
BglII AGATCT 2 cut(s) 1356, 3021
BisI GCNGC 6 cut(s) 622, 1173, 1209, 1400, 2051, 2679
BlsI GCNGC 6 cut(s) 623, 1174, 1210, 1401, 2052, 2680
Bme1390I CCNGG 6 cut(s) 123, 224, 238, 732, 1139, 1940
Bme18I GGWCC 2 cut(s) 549, 1060
BmeT110I CYCGRG 1 cut(s) 642
BmgT120I GGNCC 2 cut(s) 549, 1060
BmiI GGNNCC 3 cut(s) 81, 228, 992
BmrFI CCNGG 6 cut(s) 123, 224, 238, 732, 1139, 1940
BmrI ACTGGG 2 cut(s) 1892, 3005
BmtI GCTAGC 1 cut(s) 1521
BmuI ACTGGG 2 cut(s) 1892, 3005
BpiI GAAGAC 1 cut(s) 1100
BplI GAGNNNNNCTC 2 cut(s) 2401, 2433
BpmI CTGGAG 7 cut(s) 144, 1073, 1160, 1292, 1340, 1922, 2672
Bpu10I CCTNAGC 1 cut(s) 896
BpuEI CTTGAG 6 cut(s) 517, 1403, 1469, 1901, 2428, 2510
BpuMI CCSGG 1 cut(s) 238
BsaBI GATNNNNATC 1 cut(s) 1192
BsaI GGTCTC 1 cut(s) 1128
BsaJI CCNNGG 1 cut(s) 1302
BsaWI WCCGGW 1 cut(s) 196
Bsc4I CCNNNNNNNGG 4 cut(s) 89, 236, 1303, 1546
Bse1I ACTGG 8 cut(s) 283, 609, 994, 1275, 1887, 1995, 3000, 3013
Bse3DI GCAATG 3 cut(s) 1860, 1869, 2542
Bse8I GATNNNNATC 1 cut(s) 1192
BseBI CCWGG 5 cut(s) 123, 224, 732, 1139, 1940
BseDI CCNNGG 1 cut(s) 1302
BseGI GGATG 9 cut(s) 538, 969, 973, 1258, 1725, 1999, 2344, 2434, 2503
BseJI GATNNNNATC 1 cut(s) 1192
BseLI CCNNNNNNNGG 4 cut(s) 89, 236, 1303, 1546
BseMI GCAATG 3 cut(s) 1860, 1869, 2542
BseNI ACTGG 8 cut(s) 283, 609, 994, 1275, 1887, 1995, 3000, 3013
BseRI GAGGAG 2 cut(s) 1271, 1967
BseSI GKGCMC 1 cut(s) 1891
BseXI GCAGC 6 cut(s) 633, 1159, 1195, 1411, 2062, 2665
BsgI GTGCAG 1 cut(s) 405
BshFI GGCC 1 cut(s) 1823
BshNI GGYRCC 1 cut(s) 79
BsiHKAI GWGCWC 4 cut(s) 1158, 1293, 1891, 1938
BsiHKCI CYCGRG 1 cut(s) 642
BsiSI CCGG 2 cut(s) 197, 237
BslFI GGGAC 1 cut(s) 2670
BslI CCNNNNNNNGG 4 cut(s) 89, 236, 1303, 1546
BsmAI GTCTC 9 cut(s) 247, 366, 484, 530, 1128, 1362, 2404, 2595, 2942
BsmBI CGTCTC 1 cut(s) 530
BsmFI GGGAC 1 cut(s) 2670
BsmI GAATGC 1 cut(s) 1505
BsnI GGCC 1 cut(s) 1823
Bso31I GGTCTC 1 cut(s) 1128
BsoBI CYCGRG 1 cut(s) 642
Bsp1286I GDGCHC 5 cut(s) 1021, 1158, 1293, 1891, 1938
BspACI CCGC 4 cut(s) 574, 810, 1015, 1747
BspANI GGCC 1 cut(s) 1823
BspLI GGNNCC 3 cut(s) 81, 228, 992
BspMAI CTGCAG 3 cut(s) 790, 1213, 2712
BspMI ACCTGC 3 cut(s) 1202, 1323, 2449
BspOI GCTAGC 1 cut(s) 1521
BspPI GGATC 6 cut(s) 289, 598, 1017, 1284, 1557, 2730
BspQI GCTCTTC 1 cut(s) 1926
BspT107I GGYRCC 1 cut(s) 79
BspTI CTTAAG 2 cut(s) 371, 2471
BspTNI GGTCTC 1 cut(s) 1128
BsrDI GCAATG 3 cut(s) 1860, 1869, 2542
BsrI ACTGG 8 cut(s) 283, 609, 994, 1275, 1887, 1995, 3000, 3013
BssECI CCNNGG 1 cut(s) 1302
BssSI CACGAG 1 cut(s) 2604
BssT1I CCWWGG 1 cut(s) 1302
Bst2BI CACGAG 1 cut(s) 2604
Bst2UI CCWGG 5 cut(s) 123, 224, 732, 1139, 1940
Bst4CI ACNGT 7 cut(s) 145, 211, 774, 1690, 2144, 2780, 2838
Bst6I CTCTTC 6 cut(s) 369, 482, 1731, 1889, 1926, 2736
BstAFI CTTAAG 2 cut(s) 371, 2471
BstC8I GCNNGC 5 cut(s) 1017, 1404, 1519, 1575, 1659
BstF5I GGATG 9 cut(s) 538, 969, 973, 1258, 1725, 1999, 2344, 2434, 2503
BstMAI GTCTC 9 cut(s) 247, 366, 484, 530, 1128, 1362, 2404, 2595, 2942
BstMWI GCNNNNNNNGC 8 cut(s) 347, 926, 1387, 1396, 1730, 1739, 1775, 1859
BstNI CCWGG 5 cut(s) 123, 224, 732, 1139, 1940
BstNSI RCATGY 3 cut(s) 398, 818, 1698
BstSCI CCNGG 6 cut(s) 121, 222, 236, 730, 1137, 1938
BstSFI CTRYAG 4 cut(s) 259, 786, 1209, 2708
BstSLI GKGCMC 1 cut(s) 1891
BstV1I GCAGC 6 cut(s) 633, 1159, 1195, 1411, 2062, 2665
BstV2I GAAGAC 1 cut(s) 1100
BstX2I RGATCY 7 cut(s) 281, 1009, 1276, 1356, 1549, 2722, 3021
BstXI CCANNNNNNTGG 2 cut(s) 1990, 2011
BstYI RGATCY 7 cut(s) 281, 1009, 1276, 1356, 1549, 2722, 3021
BsuI GTATCC 1 cut(s) 1300
BsuRI GGCC 1 cut(s) 1823
BtsCI GGATG 9 cut(s) 538, 969, 973, 1258, 1725, 1999, 2344, 2434, 2503
BtsI GCAGTG 3 cut(s) 1469, 1512, 1742
BtsIMutI CAGTG 6 cut(s) 779, 1469, 1512, 1742, 2402, 3006
BveI ACCTGC 3 cut(s) 1202, 1323, 2449
Cac8I GCNNGC 5 cut(s) 1017, 1404, 1519, 1575, 1659
CaiI CAGNNNCTG 1 cut(s) 794
Cfr13I GGNCC 2 cut(s) 549, 1060
CseI GACGC 1 cut(s) 2370
CsiI ACCWGGT 1 cut(s) 730
Csp6I GTAC 3 cut(s) 653, 1130, 2268
CspCI CAANNNNNGTGG 4 cut(s) 755, 790, 1221, 1256
CviQI GTAC 3 cut(s) 653, 1130, 2268
DrdI GACNNNNNNGTC 1 cut(s) 1102
DseDI GACNNNNNNGTC 1 cut(s) 1102
Eam1104I CTCTTC 6 cut(s) 369, 482, 1731, 1889, 1926, 2736
EarI CTCTTC 6 cut(s) 369, 482, 1731, 1889, 1926, 2736
Ecl136II GAGCTC 1 cut(s) 1936
Eco130I CCWWGG 1 cut(s) 1302
Eco24I GRGCYC 2 cut(s) 1021, 1938
Eco31I GGTCTC 1 cut(s) 1128
Eco47I GGWCC 2 cut(s) 549, 1060
Eco53kI GAGCTC 1 cut(s) 1936
Eco57I CTGAAG 6 cut(s) 1283, 1599, 1772, 2303, 2504, 2711
Eco88I CYCGRG 1 cut(s) 642
EcoICRI GAGCTC 1 cut(s) 1936
EcoO109I RGGNCCY 1 cut(s) 1060
EcoRI GAATTC 1 cut(s) 376
EcoRII CCWGG 5 cut(s) 121, 222, 730, 1137, 1938
EcoT14I CCWWGG 1 cut(s) 1302
EcoT38I GRGCYC 2 cut(s) 1021, 1938
ErhI CCWWGG 1 cut(s) 1302
Esp3I CGTCTC 1 cut(s) 530
FalI AAGNNNNNCTT 4 cut(s) 479, 511, 2433, 2465
FaqI GGGAC 1 cut(s) 2670
FauI CCCGC 1 cut(s) 1008
FbaI TGATCA 1 cut(s) 427
Fnu4HI GCNGC 6 cut(s) 622, 1173, 1209, 1400, 2051, 2679
FokI GGATG 9 cut(s) 545, 976, 980, 1265, 1712, 2006, 2351, 2441, 2510
FriOI GRGCYC 2 cut(s) 1021, 1938
Fsp4HI GCNGC 6 cut(s) 622, 1173, 1209, 1400, 2051, 2679
FspBI CTAG 5 cut(s) 1457, 1518, 1553, 1649, 1755
GluI GCNGC 6 cut(s) 622, 1173, 1209, 1400, 2051, 2679
GsuI CTGGAG 7 cut(s) 144, 1073, 1160, 1292, 1340, 1922, 2672
HaeIII GGCC 1 cut(s) 1823
HapII CCGG 2 cut(s) 197, 237
HgaI GACGC 1 cut(s) 2370
HindIII AAGCTT 1 cut(s) 348
HpaII CCGG 2 cut(s) 197, 237
HphI GGTGA 6 cut(s) 693, 1178, 1892, 2104, 2275, 2972
Hpy166II GTNNAC 3 cut(s) 1880, 1889, 2900
Hpy8I GTNNAC 3 cut(s) 1880, 1889, 2900
Hpy99I CGWCG 1 cut(s) 2364
HpyCH4III ACNGT 7 cut(s) 145, 211, 774, 1690, 2144, 2780, 2838
HpyCH4IV ACGT 2 cut(s) 2733, 2984
HpyF10VI GCNNNNNNNGC 8 cut(s) 347, 926, 1387, 1396, 1730, 1739, 1775, 1859
HpySE526I ACGT 2 cut(s) 2733, 2984
Ksp22I TGATCA 1 cut(s) 427
LguI GCTCTTC 1 cut(s) 1926
Lsp1109I GCAGC 6 cut(s) 633, 1159, 1195, 1411, 2062, 2665
MabI ACCWGGT 1 cut(s) 730
MaeI CTAG 5 cut(s) 1457, 1518, 1553, 1649, 1755
MaeII ACGT 2 cut(s) 2733, 2984
MaeIII GTNAC 6 cut(s) 411, 674, 829, 1080, 1690, 1898
MfeI CAATTG 3 cut(s) 670, 2208, 2369
MflI RGATCY 7 cut(s) 281, 1009, 1276, 1356, 1549, 2722, 3021
MhlI GDGCHC 5 cut(s) 1021, 1158, 1293, 1891, 1938
MlyI GAGTC 5 cut(s) 40, 249, 1112, 1906, 2384
MmeI TCCRAC 5 cut(s) 711, 1206, 2007, 2169, 2727
MseI TTAA 7 cut(s) 213, 372, 465, 1284, 2451, 2472, 2669
MslI CAYNNNNRTG 2 cut(s) 1161, 1296
MspA1I CMGCKG 3 cut(s) 1050, 1778, 2386
MspCI CTTAAG 2 cut(s) 371, 2471
MspI CCGG 2 cut(s) 197, 237
MspR9I CCNGG 6 cut(s) 123, 224, 238, 732, 1139, 1940
MunI CAATTG 3 cut(s) 670, 2208, 2369
Mva1269I GAATGC 1 cut(s) 1505
MvaI CCWGG 5 cut(s) 123, 224, 732, 1139, 1940
MwoI GCNNNNNNNGC 8 cut(s) 347, 926, 1387, 1396, 1730, 1739, 1775, 1859
NciI CCSGG 1 cut(s) 238
NheI GCTAGC 1 cut(s) 1517
NlaIV GGNNCC 3 cut(s) 81, 228, 992
NmeAIII GCCGAG 1 cut(s) 352
NmuCI GTSAC 2 cut(s) 674, 1898
NspI RCATGY 3 cut(s) 398, 818, 1698
PaeR7I CTCGAG 1 cut(s) 642
PaqCI CACCTGC 1 cut(s) 1323
PciI ACATGT 2 cut(s) 814, 1694
PciSI GCTCTTC 1 cut(s) 1926
PctI GAATGC 1 cut(s) 1505
PfeI GAWTC 6 cut(s) 118, 403, 791, 1120, 1193, 2230
PfoI TCCNGGA 1 cut(s) 121
PkrI GCNGC 6 cut(s) 623, 1174, 1210, 1401, 2052, 2680
PleI GAGTC 5 cut(s) 40, 249, 1111, 1905, 2383
PpsI GAGTC 5 cut(s) 40, 249, 1111, 1905, 2383
PpuMI RGGWCCY 1 cut(s) 1060
PscI ACATGT 2 cut(s) 814, 1694
Psp124BI GAGCTC 1 cut(s) 1938
Psp5II RGGWCCY 1 cut(s) 1060
Psp6I CCWGG 5 cut(s) 121, 222, 730, 1137, 1938
PspGI CCWGG 5 cut(s) 121, 222, 730, 1137, 1938
PspN4I GGNNCC 3 cut(s) 81, 228, 992
PspPI GGNCC 2 cut(s) 549, 1060
PspPPI RGGWCCY 1 cut(s) 1060
PstI CTGCAG 3 cut(s) 790, 1213, 2712
PstNI CAGNNNCTG 1 cut(s) 794
PsuI RGATCY 7 cut(s) 281, 1009, 1276, 1356, 1549, 2722, 3021
PvuII CAGCTG 3 cut(s) 1050, 1778, 2386
RsaI GTAC 3 cut(s) 654, 1131, 2269
RsaNI GTAC 3 cut(s) 653, 1130, 2268
RseI CAYNNNNRTG 2 cut(s) 1161, 1296
SacI GAGCTC 1 cut(s) 1938
SapI GCTCTTC 1 cut(s) 1926
SaqAI TTAA 7 cut(s) 213, 372, 465, 1284, 2451, 2472, 2669
SatI GCNGC 6 cut(s) 622, 1173, 1209, 1400, 2051, 2679
Sau96I GGNCC 2 cut(s) 549, 1060
SchI GAGTC 5 cut(s) 40, 249, 1112, 1906, 2384
ScrFI CCNGG 6 cut(s) 123, 224, 238, 732, 1139, 1940
SduI GDGCHC 5 cut(s) 1021, 1158, 1293, 1891, 1938
SexAI ACCWGGT 1 cut(s) 730
SfcI CTRYAG 4 cut(s) 259, 786, 1209, 2708
Sfr274I CTCGAG 1 cut(s) 642
SinI GGWCC 2 cut(s) 549, 1060
SlaI CTCGAG 1 cut(s) 642
SmiMI CAYNNNNRTG 2 cut(s) 1161, 1296
SmlI CTYRAG 9 cut(s) 371, 496, 642, 1382, 1484, 1916, 2407, 2471, 2525
SmoI CTYRAG 9 cut(s) 371, 496, 642, 1382, 1484, 1916, 2407, 2471, 2525
SsiI CCGC 4 cut(s) 574, 810, 1015, 1747
SspI AATATT 1 cut(s) 1149
SspMI CTAG 5 cut(s) 1457, 1518, 1553, 1649, 1755
SstI GAGCTC 1 cut(s) 1938
StyD4I CCNGG 6 cut(s) 121, 222, 236, 730, 1137, 1938
StyI CCWWGG 1 cut(s) 1302
TaaI ACNGT 7 cut(s) 145, 211, 774, 1690, 2144, 2780, 2838
TaiI ACGT 2 cut(s) 2736, 2987
TaqI TCGA 8 cut(s) 169, 219, 401, 643, 746, 1217, 2359, 2739
TatI WGTACW 2 cut(s) 652, 2267
TfiI GAWTC 6 cut(s) 118, 403, 791, 1120, 1193, 2230
Tru1I TTAA 7 cut(s) 213, 372, 465, 1284, 2451, 2472, 2669
Tru9I TTAA 7 cut(s) 213, 372, 465, 1284, 2451, 2472, 2669
TscAI CASTG 6 cut(s) 779, 1476, 1519, 1749, 2402, 3013
TseFI GTSAC 2 cut(s) 674, 1898
TseI GCWGC 6 cut(s) 621, 1172, 1208, 1399, 2050, 2678
Tsp45I GTSAC 2 cut(s) 674, 1898
TspRI CASTG 6 cut(s) 779, 1476, 1519, 1749, 2402, 3013
Vha464I CTTAAG 2 cut(s) 371, 2471
VneI GTGCAC 1 cut(s) 1887
VpaK11BI GGWCC 2 cut(s) 549, 1060
XapI RAATTY 5 cut(s) 215, 376, 1796, 2173, 2942
XbaI TCTAGA 1 cut(s) 1552
XceI RCATGY 3 cut(s) 398, 818, 1698
XcmI CCANNNNNNNNNTGG 1 cut(s) 1001
XhoI CTCGAG 1 cut(s) 642
XspI CTAG 5 cut(s) 1457, 1518, 1553, 1649, 1755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.