Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0008230

Physical Location & Seq

Genomic Coordinates Reverse (-)

5342787 .. 5347052

Gene Structure 4266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00283430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGACTTGGTCTGGAATCCAGATGCGGCGGAATTCATGGCAGGATGGTGTGCTTGGTACGAATTGCCCAATCCCGAAAACATGGAATTGGACTTATAACTTCCAAGTCAAGGATCAGATTGGGAGCTTCTTCTACTTCCCATCGCTCAATTTTCAGAGGGCTGCTGGTGGCTTTGGCTCTTTTCATCTCAATAATAGGGAGATAATTGAAATTCCATTTGCTAAGCCTGATGGGGATATTGCTATTATGATTGGTGACTGGTATACTCGGAACCATACGGCATTGAAGACTGCTCTTGATGCTGGAAAAGACCTTGGGATGCCGGATGGAGTTCTCATCAATGGAAAGGGGCCTTATCAATACAACAAGACACTAGTACCTGATGGGATTCAGTATGAAACCATCAATGTTGAACCAGGGAAAACTTATCGACTCCGTGTGCACAATGTTGGTGTTTCAACTAGTTTGAACTTCAGAATTCAGAGTCACAATCTGCTTCTAGCTGAAACAGAGGGATATTATACAATCCAGCAGAACTATACAAACTTTGATATTCATGTTGGACAATCGTATTCTTTTCTTGTTACCATGGATCAAAATGCCAGTAGTGATTACTACATTGTGGCAAGTGCAAGGTTTGTGAATGAATCACTTTGGCAGAGGGTTACAGGTGTTGCTGTCTTACACTATTCAAACTCTAAAGGACCAGTAAGCGGTCCTCTTCCTGATGCTCCCCAGGATGCTTTTGACCCACAATGGTCGATGAACCAGGCATTGACCATCAGGCAAAACGGATCTGCAAGTGGAGCTCGCCCTAATCCTCAGGGATCATTTCACTATGGTTCAATTAACATCACTGATACTTACGTGTTAAAAATTGTGCCACCACTCACAATTGATGGGAAACTCCGAGCTACAATAAATGGCATCTCTTTTGTCAATCCTCAGACACCAATCAGGCTTGCTGATCAGCATAAAGTTAAAGGAGATTATAAGCTTGATTTTCCCAACATGTCACTTAATAGACTTCCCCGAAGAGACATGTCTGTTATTAATGCTACATATAAGGGTTTTATTGAAATTGTATTCCAGAACAATGACACCACTGTGCAGACTTTTCATTTAGATGGATATTCCTTTTTCGTGGTTGGGATGGGTTATGGTAATTGGACAGTAGACAATCAAGGAAATTATAACAAGTGGGATGCAATCTCTCGCTGCACTACACAGGTCTACCCTGGGGCATGGACTGCAGTGCTTATCTCACTTGACAATCCTGGAGCATGGAATCTTAGATCACAAAACCTTGATAGATGGTATCTGGGACAAGAGACCTATTTGAGAATTGTCAATCCGGAGGAGAATGGTGAAACAGAGTTTACCGCGCCTGATAATGTTCTGTATTGTGGTGCCTTAGCCAACTTGCAGAAGGAACAGAAACATTCGTCTGCATCATCAATTTCCAGTGAAACTTTCAAGCTATTCTTCTCTCTTCTGATGGCTTTCTTCACATTGGTCTGCACTTTTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0008150 GO:0008152 GO:0009506 GO:0016020 GO:0016491 GO:0016722 GO:0030054 GO:0031224 GO:0031225 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0055044 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

510

Amino Acids

57.48

Weight (kDa)

6.56

Isoelectric Point (pI)

31.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	1 - 66	7.8e-21	Multicopper oxidase
Cu-oxidase	PF00394	80 - 233	9e-45	Multicopper oxidase
Cu-oxidase_2	PF07731	317 - 453	8.5e-33	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25240 AT4G25240 AT5G51480
fragaria_vesca	FvH4_7g27730 FvH4_7g27730 FvH4_7g27730
malus_domestica	MD07G1254600.v1.1 MD11G1195700.v1.1
prunus_persica	Prupe.2G278000_v2.0.a1 Prupe.2G278000_v2.0.a1
pyrus_communis	pycom01g19420 pycom07g22780
rosa_chinensis	RchiOBHm_Chr1g0374521
rosa_laevigata	RLG00000026731
rosa_multiflora	Rmu_ssc0000007.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283430
rosa_rugosa	Rorug01G0383900
rosa_samantha	Rh1AG394600 Rh1BG359200 Rh1CG372300 Rh1DG389900
rosa_wichuraiana	Rw1G034160 Rw1G034980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	96, 993, 1194
AccB1I	GGYRCC	1 cut(s)	1409
AccI	GTMKAC	3 cut(s)	263, 1176, 1233
AccII	CGCG	1 cut(s)	1385
AccIII	TCCGGA	1 cut(s)	1354
AciI	CCGC	4 cut(s)	25, 28, 714, 1383
AclWI	GGATC	4 cut(s)	120, 600, 802, 835
AcsI	RAATTY	3 cut(s)	31, 210, 477
AcuI	CTGAAG	1 cut(s)	457
AfaI	GTAC	2 cut(s)	58, 378
AfiI	CCNNNNNNNGG	2 cut(s)	109, 713
AflIII	ACRYGT	3 cut(s)	867, 1011, 1041
AgsI	TTSAA	9 cut(s)	209, 286, 413, 459, 469, 693, 846, 1079, 1477
AhlI	ACTAGT	2 cut(s)	373, 461
AjnI	CCWGG	5 cut(s)	415, 735, 768, 1237, 1276
AleI	CACNNNNGTG	1 cut(s)	1106
AluBI	AGCT	6 cut(s)	126, 503, 809, 914, 997, 1480
AluI	AGCT	6 cut(s)	126, 503, 809, 914, 997, 1480
Alw21I	GWGCWC	2 cut(s)	444, 811
Alw26I	GTCTC	2 cut(s)	1032, 1325
Alw44I	GTGCAC	1 cut(s)	440
AlwI	GGATC	4 cut(s)	120, 600, 802, 835
Aor13HI	TCCGGA	1 cut(s)	1354
AoxI	GGCC	1 cut(s)	350
ApaLI	GTGCAC	1 cut(s)	440
ApeKI	GCWGC	2 cut(s)	161, 1218
ApoI	RAATTY	3 cut(s)	31, 210, 477
AseI	ATTAAT	1 cut(s)	1053
AspLEI	GCGC	1 cut(s)	1387
AspS9I	GGNCC	3 cut(s)	350, 704, 716
AsuHPI	GGTGA	2 cut(s)	266, 1379
AvaII	GGWCC	2 cut(s)	704, 716
AxyI	CCTNAGG	1 cut(s)	822
BaeGI	GKGCMC	1 cut(s)	444
BaeI	ACNNNNGTAYC	4 cut(s)	360, 393, 852, 885
BanI	GGYRCC	1 cut(s)	1409
BanII	GRGCYC	1 cut(s)	811
BbsI	GAAGAC	1 cut(s)	293
Bbv12I	GWGCWC	2 cut(s)	444, 811
BbvI	GCAGC	2 cut(s)	148, 1205
BceAI	ACGGC	1 cut(s)	294
BciT130I	CCWGG	5 cut(s)	417, 737, 770, 1239, 1278
BclI	TGATCA	1 cut(s)	967
BcoDI	GTCTC	2 cut(s)	1032, 1325
BcuI	ACTAGT	2 cut(s)	373, 461
BfaI	CTAG	3 cut(s)	374, 462, 500
BfmI	CTRYAG	1 cut(s)	1251
BisI	GCNGC	3 cut(s)	26, 162, 1219
BlpI	GCTNAGC	1 cut(s)	222
BlsI	GCNGC	3 cut(s)	27, 163, 1220
Bme1390I	CCNGG	5 cut(s)	417, 737, 770, 1239, 1278
Bme18I	GGWCC	2 cut(s)	704, 716
BmgT120I	GGNCC	3 cut(s)	350, 704, 716
BmiI	GGNNCC	3 cut(s)	272, 351, 1411
BmrFI	CCNGG	5 cut(s)	417, 737, 770, 1239, 1278
BmsI	GCATC	8 cut(s)	12, 289, 309, 718, 730, 936, 1195, 1460
BpiI	GAAGAC	1 cut(s)	293
BpmI	CTGGAG	1 cut(s)	1299
Bpu10I	CCTNAGC	1 cut(s)	1414
Bpu1102I	GCTNAGC	1 cut(s)	222
BsaAI	YACGTR	1 cut(s)	868
BsaI	GGTCTC	1 cut(s)	1325
BsaJI	CCNNGG	6 cut(s)	313, 416, 588, 735, 1237, 1238
BsaWI	WCCGGW	1 cut(s)	1354
Bsc4I	CCNNNNNNNGG	2 cut(s)	109, 713
Bse1I	ACTGG	4 cut(s)	263, 603, 707, 1464
Bse21I	CCTNAGG	1 cut(s)	822
BseAI	TCCGGA	1 cut(s)	1354
BseBI	CCWGG	5 cut(s)	417, 737, 770, 1239, 1278
BseDI	CCNNGG	6 cut(s)	313, 416, 588, 735, 1237, 1238
BseGI	GGATG	6 cut(s)	49, 324, 331, 745, 1158, 1210
BseLI	CCNNNNNNNGG	2 cut(s)	109, 713
BseMII	CTCAG	2 cut(s)	836, 959
BseNI	ACTGG	4 cut(s)	263, 603, 707, 1464
BseRI	GAGGAG	1 cut(s)	1373
BseSI	GKGCMC	1 cut(s)	444
BseXI	GCAGC	2 cut(s)	148, 1205
BsgI	GTGCAG	3 cut(s)	1130, 1204, 1504
Bsh1236I	CGCG	1 cut(s)	1385
BshFI	GGCC	1 cut(s)	352
BshNI	GGYRCC	1 cut(s)	1409
BsiHKAI	GWGCWC	2 cut(s)	444, 811
BsiSI	CCGG	2 cut(s)	323, 1355
BslFI	GGGAC	1 cut(s)	1338
BslI	CCNNNNNNNGG	2 cut(s)	109, 713
BsmAI	GTCTC	2 cut(s)	1032, 1325
BsmFI	GGGAC	1 cut(s)	1338
BsnI	GGCC	1 cut(s)	352
Bso31I	GGTCTC	1 cut(s)	1325
Bsp1286I	GDGCHC	2 cut(s)	444, 811
Bsp13I	TCCGGA	1 cut(s)	1354
Bsp143I	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
Bsp1720I	GCTNAGC	1 cut(s)	222
Bsp19I	CCATGG	1 cut(s)	588
BspACI	CCGC	4 cut(s)	25, 28, 714, 1383
BspANI	GGCC	1 cut(s)	352
BspCNI	CTCAG	2 cut(s)	835, 958
BspEI	TCCGGA	1 cut(s)	1354
BspFNI	CGCG	1 cut(s)	1385
BspLI	GGNNCC	3 cut(s)	272, 351, 1411
BspMAI	CTGCAG	1 cut(s)	1255
BspPI	GGATC	4 cut(s)	120, 600, 802, 835
BspT107I	GGYRCC	1 cut(s)	1409
BspTNI	GGTCTC	1 cut(s)	1325
BsrI	ACTGG	4 cut(s)	263, 603, 707, 1464
BssECI	CCNNGG	6 cut(s)	313, 416, 588, 735, 1237, 1238
BssMI	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
BssNAI	GTATAC	1 cut(s)	264
BssT1I	CCWWGG	2 cut(s)	313, 588
Bst1107I	GTATAC	1 cut(s)	264
Bst2UI	CCWGG	5 cut(s)	417, 737, 770, 1239, 1278
Bst4CI	ACNGT	2 cut(s)	1108, 1174
Bst6I	CTCTTC	3 cut(s)	726, 1030, 1497
BstAPI	GCANNNNNTGC	1 cut(s)	1250
BstBAI	YACGTR	1 cut(s)	868
BstC8I	GCNNGC	2 cut(s)	811, 963
BstDEI	CTNAG	5 cut(s)	222, 822, 945, 1292, 1414
BstDSI	CCRYGG	1 cut(s)	588
BstF5I	GGATG	6 cut(s)	49, 324, 331, 745, 1158, 1210
BstFNI	CGCG	1 cut(s)	1385
BstHHI	GCGC	1 cut(s)	1387
BstKTI	GATC	6 cut(s)	115, 595, 797, 830, 970, 1298
BstMAI	GTCTC	2 cut(s)	1032, 1325
BstMBI	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
BstMWI	GCNNNNNNNGC	3 cut(s)	299, 806, 1250
BstNI	CCWGG	5 cut(s)	417, 737, 770, 1239, 1278
BstNSI	RCATGY	2 cut(s)	1015, 1045
BstSCI	CCNGG	5 cut(s)	415, 735, 768, 1237, 1276
BstSFI	CTRYAG	1 cut(s)	1251
BstSLI	GKGCMC	1 cut(s)	444
BstUI	CGCG	1 cut(s)	1385
BstV1I	GCAGC	2 cut(s)	148, 1205
BstV2I	GAAGAC	1 cut(s)	293
BstX2I	RGATCY	1 cut(s)	794
BstYI	RGATCY	1 cut(s)	794
BstZ17I	GTATAC	1 cut(s)	264
Bsu36I	CCTNAGG	1 cut(s)	822
BsuRI	GGCC	1 cut(s)	352
BtgI	CCRYGG	1 cut(s)	588
BtgZI	GCGATG	1 cut(s)	126
BtsCI	GGATG	6 cut(s)	49, 324, 331, 745, 1158, 1210
BtsI	GCAGTG	1 cut(s)	1260
BtsIMutI	CAGTG	4 cut(s)	855, 1104, 1260, 1471
Cac8I	GCNNGC	2 cut(s)	811, 963
CfoI	GCGC	1 cut(s)	1387
Cfr13I	GGNCC	3 cut(s)	350, 704, 716
Csp6I	GTAC	2 cut(s)	57, 377
CviAII	CATG	8 cut(s)	36, 81, 557, 589, 1012, 1042, 1245, 1284
CviQI	GTAC	2 cut(s)	57, 377
DdeI	CTNAG	5 cut(s)	222, 822, 945, 1292, 1414
DpnI	GATC	6 cut(s)	114, 594, 796, 829, 969, 1297
DpnII	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
Eam1104I	CTCTTC	3 cut(s)	726, 1030, 1497
EarI	CTCTTC	3 cut(s)	726, 1030, 1497
EciI	GGCGGA	1 cut(s)	43
Ecl136II	GAGCTC	1 cut(s)	809
Eco130I	CCWWGG	2 cut(s)	313, 588
Eco24I	GRGCYC	1 cut(s)	811
Eco31I	GGTCTC	1 cut(s)	1325
Eco47I	GGWCC	2 cut(s)	704, 716
Eco53kI	GAGCTC	1 cut(s)	809
Eco57I	CTGAAG	1 cut(s)	457
Eco81I	CCTNAGG	1 cut(s)	822
EcoICRI	GAGCTC	1 cut(s)	809
EcoO109I	RGGNCCY	1 cut(s)	350
EcoRI	GAATTC	2 cut(s)	31, 477
EcoRII	CCWGG	5 cut(s)	415, 735, 768, 1237, 1276
EcoT14I	CCWWGG	2 cut(s)	313, 588
EcoT38I	GRGCYC	1 cut(s)	811
ErhI	CCWWGG	2 cut(s)	313, 588
FaeI	CATG	8 cut(s)	39, 84, 560, 592, 1015, 1045, 1248, 1287
FalI	AAGNNNNNCTT	2 cut(s)	1469, 1501
FaqI	GGGAC	1 cut(s)	1338
FatI	CATG	8 cut(s)	35, 80, 556, 588, 1011, 1041, 1244, 1283
FbaI	TGATCA	1 cut(s)	967
FblI	GTMKAC	3 cut(s)	263, 1176, 1233
Fnu4HI	GCNGC	3 cut(s)	26, 162, 1219
FokI	GGATG	6 cut(s)	56, 331, 338, 752, 1165, 1217
FriOI	GRGCYC	1 cut(s)	811
Fsp4HI	GCNGC	3 cut(s)	26, 162, 1219
FspBI	CTAG	3 cut(s)	374, 462, 500
GlaI	GCGC	1 cut(s)	1386
GluI	GCNGC	3 cut(s)	26, 162, 1219
GsuI	CTGGAG	1 cut(s)	1299
HaeIII	GGCC	1 cut(s)	352
HapII	CCGG	2 cut(s)	323, 1355
HhaI	GCGC	1 cut(s)	1387
Hin1II	CATG	8 cut(s)	39, 84, 560, 592, 1015, 1045, 1248, 1287
Hin6I	GCGC	1 cut(s)	1385
HinP1I	GCGC	1 cut(s)	1385
HindIII	AAGCTT	1 cut(s)	995
HinfI	GANTC	6 cut(s)	15, 388, 432, 484, 647, 1288
HpaII	CCGG	2 cut(s)	323, 1355
HphI	GGTGA	2 cut(s)	266, 1379
Hpy166II	GTNNAC	5 cut(s)	264, 442, 1177, 1234, 1380
Hpy188I	TCNGA	8 cut(s)	117, 156, 270, 476, 483, 911, 948, 1497
Hpy188III	TCNNGA	7 cut(s)	12, 19, 73, 296, 725, 1090, 1355
Hpy8I	GTNNAC	5 cut(s)	264, 442, 1177, 1234, 1380
HpyAV	CCTTC	1 cut(s)	1423
HpyCH4III	ACNGT	2 cut(s)	1108, 1174
HpyCH4IV	ACGT	1 cut(s)	867
HpyF10VI	GCNNNNNNNGC	3 cut(s)	299, 806, 1250
HpyF3I	CTNAG	5 cut(s)	222, 822, 945, 1292, 1414
HpySE526I	ACGT	1 cut(s)	867
Hsp92II	CATG	8 cut(s)	39, 84, 560, 592, 1015, 1045, 1248, 1287
HspAI	GCGC	1 cut(s)	1385
Kpn2I	TCCGGA	1 cut(s)	1354
Ksp22I	TGATCA	1 cut(s)	967
Kzo9I	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
LmnI	GCTCC	4 cut(s)	123, 736, 806, 1280
Lsp1109I	GCAGC	2 cut(s)	148, 1205
LweI	GCATC	8 cut(s)	12, 289, 309, 718, 730, 936, 1195, 1460
MaeI	CTAG	3 cut(s)	374, 462, 500
MaeII	ACGT	1 cut(s)	867
MaeIII	GTNAC	5 cut(s)	254, 485, 583, 664, 1014
MalI	GATC	6 cut(s)	114, 594, 796, 829, 969, 1297
MboI	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
MboII	GAAGA	7 cut(s)	121, 298, 713, 1047, 1477, 1484, 1498
MfeI	CAATTG	1 cut(s)	894
MflI	RGATCY	1 cut(s)	794
MhlI	GDGCHC	2 cut(s)	444, 811
MlyI	GAGTC	2 cut(s)	426, 493
MmeI	TCCRAC	1 cut(s)	541
MnlI	CCTC	7 cut(s)	150, 505, 654, 729, 831, 954, 1351
MroI	TCCGGA	1 cut(s)	1354
MseI	TTAA	5 cut(s)	849, 872, 981, 1020, 1053
MslI	CAYNNNNRTG	2 cut(s)	1106, 1125
MspI	CCGG	2 cut(s)	323, 1355
MspR9I	CCNGG	5 cut(s)	417, 737, 770, 1239, 1278
MunI	CAATTG	1 cut(s)	894
MvaI	CCWGG	5 cut(s)	417, 737, 770, 1239, 1278
MvnI	CGCG	1 cut(s)	1385
MwoI	GCNNNNNNNGC	3 cut(s)	299, 806, 1250
NcoI	CCATGG	1 cut(s)	588
NdeII	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
NlaIII	CATG	8 cut(s)	39, 84, 560, 592, 1015, 1045, 1248, 1287
NlaIV	GGNNCC	3 cut(s)	272, 351, 1411
NmuCI	GTSAC	3 cut(s)	254, 485, 1014
NspI	RCATGY	2 cut(s)	1015, 1045
OliI	CACNNNNGTG	1 cut(s)	1106
PasI	CCCWGGG	1 cut(s)	1238
PciI	ACATGT	2 cut(s)	1011, 1041
PfeI	GAWTC	4 cut(s)	15, 388, 647, 1288
PflFI	GACNNNGTC	1 cut(s)	7
PfoI	TCCNGGA	1 cut(s)	1276
PkrI	GCNGC	3 cut(s)	27, 163, 1220
PleI	GAGTC	2 cut(s)	426, 492
PpsI	GAGTC	2 cut(s)	426, 492
Ppu21I	YACGTR	1 cut(s)	868
PscI	ACATGT	2 cut(s)	1011, 1041
PshBI	ATTAAT	1 cut(s)	1053
PsiI	TTATAA	3 cut(s)	96, 993, 1194
Psp124BI	GAGCTC	1 cut(s)	811
Psp6I	CCWGG	5 cut(s)	415, 735, 768, 1237, 1276
PspGI	CCWGG	5 cut(s)	415, 735, 768, 1237, 1276
PspN4I	GGNNCC	3 cut(s)	272, 351, 1411
PspPI	GGNCC	3 cut(s)	350, 704, 716
PstI	CTGCAG	1 cut(s)	1255
PsuI	RGATCY	1 cut(s)	794
PsyI	GACNNNGTC	1 cut(s)	7
RsaI	GTAC	2 cut(s)	58, 378
RsaNI	GTAC	2 cut(s)	57, 377
RseI	CAYNNNNRTG	2 cut(s)	1106, 1125
SacI	GAGCTC	1 cut(s)	811
SaqAI	TTAA	5 cut(s)	849, 872, 981, 1020, 1053
SatI	GCNGC	3 cut(s)	26, 162, 1219
Sau3AI	GATC	6 cut(s)	112, 592, 794, 827, 967, 1295
Sau96I	GGNCC	3 cut(s)	350, 704, 716
SchI	GAGTC	2 cut(s)	426, 493
ScrFI	CCNGG	5 cut(s)	417, 737, 770, 1239, 1278
SduI	GDGCHC	2 cut(s)	444, 811
SfaNI	GCATC	8 cut(s)	12, 289, 309, 718, 730, 936, 1195, 1460
SfcI	CTRYAG	1 cut(s)	1251
SinI	GGWCC	2 cut(s)	704, 716
SmiMI	CAYNNNNRTG	2 cut(s)	1106, 1125
SpeI	ACTAGT	2 cut(s)	373, 461
SsiI	CCGC	4 cut(s)	25, 28, 714, 1383
SspMI	CTAG	3 cut(s)	374, 462, 500
SstI	GAGCTC	1 cut(s)	811
StyD4I	CCNGG	5 cut(s)	415, 735, 768, 1237, 1276
StyI	CCWWGG	2 cut(s)	313, 588
TaaI	ACNGT	2 cut(s)	1108, 1174
TaiI	ACGT	1 cut(s)	870
TaqI	TCGA	2 cut(s)	430, 761
TauI	GCSGC	1 cut(s)	28
TfiI	GAWTC	4 cut(s)	15, 388, 647, 1288
Tru1I	TTAA	5 cut(s)	849, 872, 981, 1020, 1053
Tru9I	TTAA	5 cut(s)	849, 872, 981, 1020, 1053
TscAI	CASTG	4 cut(s)	862, 1111, 1260, 1471
TseFI	GTSAC	3 cut(s)	254, 485, 1014
TseI	GCWGC	2 cut(s)	161, 1218
Tsp45I	GTSAC	3 cut(s)	254, 485, 1014
TspDTI	ATGAA	7 cut(s)	24, 173, 411, 545, 660, 779, 1109
TspGWI	ACGGA	2 cut(s)	425, 807
TspRI	CASTG	4 cut(s)	862, 1111, 1260, 1471
Tth111I	GACNNNGTC	1 cut(s)	7
VneI	GTGCAC	1 cut(s)	440
VpaK11BI	GGWCC	2 cut(s)	704, 716
VspI	ATTAAT	1 cut(s)	1053
XapI	RAATTY	3 cut(s)	31, 210, 477
XceI	RCATGY	2 cut(s)	1015, 1045
XmiI	GTMKAC	3 cut(s)	263, 1176, 1233
XspI	CTAG	3 cut(s)	374, 462, 500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.