Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0008230

Physical Location & Seq

Genomic Coordinates Forward (+)

64197569 .. 64201642

Gene Structure 4074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG372300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCCGCTTCTCGGCTCTCTCTGTTGGCTCTGGTTTCTCTGACCCACATTGCTCTGCTTTCGACTCTCTGTTTCGCGGCGGACCCTTATGTGTTTTTCGACTTCAAGGTCTCCTACATCACCGCCTCACCGCTCGGCGTTCCTCAGAGGGTTATAGCAATTAACGGGAAGTTTCCGGGTGATCCTATCAACGCTACTACGAACAACAATGTTGTTGTTAATGTGCATAATGGGCTGGATGAAGACCTACTCATGACTTGGTCTGGAATCCAGATGCGGCGGAATTCATGGCAGGATGGTGTGCTTGGTACGAATTGCCCAATCCCAAAAACTTGGAACTGGACTTATAACTTCCAAGTCAAGGATCAGATCGGGAGCTTCTTCTACTTCCCATCGCTGAATTTTCAGAGGGCTGCTGGTGGCTTTGGCTCTTTTCATCTCAATAATAGGGAGATAGTAGAAATTCCATTTGCTAAGCCTGATGGGGATATTGCTATTATGATTGGTGACTGGTATACTCGGAACCATACGGCATTGAAGACTGCTCTTGATGCTGGAAAAGACCTTGGGATGCCGGATGGAGTTCTCATCAATGGAAAGGGGCCTTATCAATACAACAAGACACTAGTACCTGATGGGATTCAGTATGAAACCATCAATGTTGAACCAGGGAAAACTTATCGACTCCGTGTGCACAATGTTGGTGTTTCAACTAGTTTGAACTTCAGAATTCAGAGTCACAATCTGCTTCTAGCTGAAACAGAGGGATATTATACAATCCAGCAGAACTATACAAACTTTGATATTCATGTTGGACAATCGTATTCTTTTCTTGTTACCATGGATCAAAATGCCAGTAGTGATTACTACATTGTGGCAAGTGCAAGGTTTGTGAATGAATCACTTTGGCAGAGGGTTACAGGTGTTGCTGTCTTACACTATTCAAACTCTAAAGGACCAGTAAGCGGTCCTCTTCCTGATGCTCCCCAGGATGCTTTTGACCCACAATGGTCGATGAACCAGGCATTGACTGTCAGGCAAAACGGTTCCGCAAGTGGAGCTCGCCCTAATCCTCAGGGATCATTTCACTATGGTTCAATTAACATCACTGATACTTACGTGTTAAAAATTGTGCCACCTCTCACAATTGATGGGAAACTCCGAGCAACAATAAATGGCATCTCTTTTGTCAATCCTCAGACACCAATCAGGCTTGCTGATCAGCATAAAGTTAAAGGAGATTATAAGCTTGATTTTCCCAACATGTCACTTAATAGACTTCCCCGAAGAGACATGTCTGTTATTAATGCTACATATAAGGGTTTTATTGAAATTGTATTCCAGAACAATGACACCACTGTGCAGACTTTTCATTTAGATGGATATTCCTTTTTCGTGGTTGGGATGGGTTATGGTAATTGGACAGTAGACAATCAAGGAAATTATAACAAGTGGGATGCAATCTCTCGCTGCACTACACAGGTCTGTTTTCTTATTGGAGCAACTCTTTTATTACTTGCAAGGTTTACTTTGGAATGCTTGTTGCTTGTTGTTTGTCTTGCATTGAGTTCTGTTTTGTTACTGTGTGTAGGTCTACCCTGGGGCATGGACTGCAGTGCTTATCTCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0008150 GO:0008152 GO:0009506 GO:0016020 GO:0016491 GO:0016722 GO:0030054 GO:0031224 GO:0031225 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0055044 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

543

Amino Acids

60.32

Weight (kDa)

6.59

Isoelectric Point (pI)

26.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	37 - 150	2.4e-38	Multicopper oxidase
Cu-oxidase	PF00394	164 - 317	1e-44	Multicopper oxidase
Cu-oxidase_2	PF07731	401 - 495	3.4e-18	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008230)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25240 AT4G25240 AT5G51480
fragaria_vesca	FvH4_7g27730 FvH4_7g27730 FvH4_7g27730
malus_domestica	MD07G1254600.v1.1 MD11G1195700.v1.1
prunus_persica	Prupe.2G278000_v2.0.a1 Prupe.2G278000_v2.0.a1
pyrus_communis	pycom01g19420 pycom07g22780
rosa_chinensis	RchiOBHm_Chr1g0374521
rosa_laevigata	RLG00000026731
rosa_multiflora	Rmu_ssc0000007.1_g000001
rosa_roxburghii	Rroxscaffold_4G00283430
rosa_rugosa	Rorug01G0383900
rosa_samantha	Rh1AG394600 Rh1BG359200 Rh1CG372300 Rh1DG389900
rosa_wichuraiana	Rw1G034160 Rw1G034980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	348, 1245, 1446
AasI	GACNNNNNNGTC	1 cut(s)	107
AccBSI	CCGCTC	1 cut(s)	133
AccI	GTMKAC	3 cut(s)	515, 1428, 1594
AccII	CGCG	1 cut(s)	77
AciI	CCGC	9 cut(s)	6, 77, 80, 123, 131, 277, 280, 966, 1050
AclWI	GGATC	4 cut(s)	176, 372, 852, 1087
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	283, 400, 462, 729
AcuI	CTGAAG	1 cut(s)	709
AfaI	GTAC	2 cut(s)	310, 630
AfiI	CCNNNNNNNGG	3 cut(s)	12, 361, 965
AflIII	ACRYGT	3 cut(s)	1119, 1263, 1293
AgsI	TTSAA	8 cut(s)	106, 538, 665, 711, 721, 945, 1098, 1331
AhlI	ACTAGT	2 cut(s)	625, 713
AjnI	CCWGG	4 cut(s)	667, 987, 1020, 1598
AleI	CACNNNNGTG	1 cut(s)	1358
AluBI	AGCT	4 cut(s)	378, 755, 1061, 1249
AluI	AGCT	4 cut(s)	378, 755, 1061, 1249
Alw21I	GWGCWC	2 cut(s)	696, 1063
Alw26I	GTCTC	2 cut(s)	115, 1284
Alw44I	GTGCAC	1 cut(s)	692
AlwI	GGATC	4 cut(s)	176, 372, 852, 1087
AoxI	GGCC	2 cut(s)	3, 602
ApaLI	GTGCAC	1 cut(s)	692
ApeKI	GCWGC	2 cut(s)	413, 1470
ApoI	RAATTY	4 cut(s)	283, 400, 462, 729
AseI	ATTAAT	1 cut(s)	1305
AspS9I	GGNCC	4 cut(s)	82, 602, 956, 968
AsuC2I	CCSGG	1 cut(s)	177
AsuHPI	GGTGA	4 cut(s)	112, 120, 191, 518
AvaII	GGWCC	3 cut(s)	82, 956, 968
AxyI	CCTNAGG	1 cut(s)	1074
BaeGI	GKGCMC	1 cut(s)	696
BaeI	ACNNNNGTAYC	4 cut(s)	612, 645, 1104, 1137
BanII	GRGCYC	1 cut(s)	1063
BbsI	GAAGAC	2 cut(s)	249, 545
Bbv12I	GWGCWC	2 cut(s)	696, 1063
BbvI	GCAGC	2 cut(s)	400, 1457
BccI	CCATC	9 cut(s)	290, 400, 476, 572, 629, 662, 1145, 1373, 1399
BceAI	ACGGC	1 cut(s)	546
BciT130I	CCWGG	4 cut(s)	669, 989, 1022, 1600
BclI	TGATCA	1 cut(s)	1219
BcnI	CCSGG	1 cut(s)	177
BcoDI	GTCTC	2 cut(s)	115, 1284
BcuI	ACTAGT	2 cut(s)	625, 713
BfaI	CTAG	3 cut(s)	626, 714, 752
BfmI	CTRYAG	1 cut(s)	1612
BisI	GCNGC	5 cut(s)	6, 78, 278, 414, 1471
BlpI	GCTNAGC	1 cut(s)	474
BlsI	GCNGC	5 cut(s)	7, 79, 279, 415, 1472
Bme1390I	CCNGG	5 cut(s)	177, 669, 989, 1022, 1600
Bme18I	GGWCC	3 cut(s)	82, 956, 968
BmgT120I	GGNCC	4 cut(s)	82, 602, 956, 968
BmiI	GGNNCC	4 cut(s)	84, 524, 603, 1048
BmrFI	CCNGG	5 cut(s)	177, 669, 989, 1022, 1600
BmsI	GCATC	7 cut(s)	264, 541, 561, 970, 982, 1188, 1447
BpiI	GAAGAC	2 cut(s)	249, 545
Bpu1102I	GCTNAGC	1 cut(s)	474
BpuMI	CCSGG	1 cut(s)	177
BsaAI	YACGTR	1 cut(s)	1120
BsaI	GGTCTC	1 cut(s)	115
BsaJI	CCNNGG	6 cut(s)	565, 668, 840, 987, 1598, 1599
Bsc4I	CCNNNNNNNGG	3 cut(s)	12, 361, 965
Bse1I	ACTGG	4 cut(s)	344, 515, 855, 959
Bse21I	CCTNAGG	1 cut(s)	1074
Bse3DI	GCAATG	1 cut(s)	48
BseBI	CCWGG	4 cut(s)	669, 989, 1022, 1600
BseDI	CCNNGG	6 cut(s)	565, 668, 840, 987, 1598, 1599
BseGI	GGATG	7 cut(s)	244, 301, 576, 583, 997, 1410, 1462
BseLI	CCNNNNNNNGG	3 cut(s)	12, 361, 965
BseMI	GCAATG	1 cut(s)	48
BseMII	CTCAG	3 cut(s)	158, 1088, 1211
BseNI	ACTGG	4 cut(s)	344, 515, 855, 959
BseSI	GKGCMC	1 cut(s)	696
BseXI	GCAGC	2 cut(s)	400, 1457
BsgI	GTGCAG	2 cut(s)	1382, 1456
Bsh1236I	CGCG	1 cut(s)	77
BshFI	GGCC	2 cut(s)	5, 604
BsiHKAI	GWGCWC	2 cut(s)	696, 1063
BsiSI	CCGG	2 cut(s)	176, 575
BslI	CCNNNNNNNGG	3 cut(s)	12, 361, 965
BsmAI	GTCTC	2 cut(s)	115, 1284
BsmI	GAATGC	1 cut(s)	1541
BsnI	GGCC	2 cut(s)	5, 604
Bso31I	GGTCTC	1 cut(s)	115
Bsp1286I	GDGCHC	2 cut(s)	696, 1063
Bsp143I	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
Bsp1720I	GCTNAGC	1 cut(s)	474
Bsp19I	CCATGG	1 cut(s)	840
BspACI	CCGC	9 cut(s)	6, 77, 80, 123, 131, 277, 280, 966, 1050
BspANI	GGCC	2 cut(s)	5, 604
BspCNI	CTCAG	3 cut(s)	157, 1087, 1210
BspFNI	CGCG	1 cut(s)	77
BspHI	TCATGA	1 cut(s)	252
BspLI	GGNNCC	4 cut(s)	84, 524, 603, 1048
BspMAI	CTGCAG	1 cut(s)	1616
BspPI	GGATC	4 cut(s)	176, 372, 852, 1087
BspTNI	GGTCTC	1 cut(s)	115
BsrBI	CCGCTC	1 cut(s)	133
BsrDI	GCAATG	1 cut(s)	48
BsrI	ACTGG	4 cut(s)	344, 515, 855, 959
BssECI	CCNNGG	6 cut(s)	565, 668, 840, 987, 1598, 1599
BssMI	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
BssNAI	GTATAC	1 cut(s)	516
BssT1I	CCWWGG	2 cut(s)	565, 840
Bst1107I	GTATAC	1 cut(s)	516
Bst2UI	CCWGG	4 cut(s)	669, 989, 1022, 1600
Bst4CI	ACNGT	5 cut(s)	1033, 1046, 1360, 1426, 1584
Bst6I	CTCTTC	2 cut(s)	978, 1282
BstAPI	GCANNNNNTGC	1 cut(s)	1611
BstBAI	YACGTR	1 cut(s)	1120
BstC8I	GCNNGC	2 cut(s)	1063, 1215
BstDEI	CTNAG	4 cut(s)	144, 474, 1074, 1197
BstDSI	CCRYGG	1 cut(s)	840
BstF5I	GGATG	7 cut(s)	244, 301, 576, 583, 997, 1410, 1462
BstFNI	CGCG	1 cut(s)	77
BstKTI	GATC	6 cut(s)	184, 367, 372, 847, 1082, 1222
BstMAI	GTCTC	2 cut(s)	115, 1284
BstMBI	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
BstMWI	GCNNNNNNNGC	4 cut(s)	232, 551, 1058, 1611
BstNI	CCWGG	4 cut(s)	669, 989, 1022, 1600
BstNSI	RCATGY	2 cut(s)	1267, 1297
BstSCI	CCNGG	5 cut(s)	175, 667, 987, 1020, 1598
BstSFI	CTRYAG	1 cut(s)	1612
BstSLI	GKGCMC	1 cut(s)	696
BstUI	CGCG	1 cut(s)	77
BstV1I	GCAGC	2 cut(s)	400, 1457
BstV2I	GAAGAC	2 cut(s)	249, 545
BstXI	CCANNNNNNTGG	1 cut(s)	333
BstZ17I	GTATAC	1 cut(s)	516
Bsu36I	CCTNAGG	1 cut(s)	1074
BsuRI	GGCC	2 cut(s)	5, 604
BtgI	CCRYGG	1 cut(s)	840
BtgZI	GCGATG	1 cut(s)	378
BtsCI	GGATG	7 cut(s)	244, 301, 576, 583, 997, 1410, 1462
BtsI	GCAGTG	1 cut(s)	1621
BtsIMutI	CAGTG	3 cut(s)	1107, 1356, 1621
Cac8I	GCNNGC	2 cut(s)	1063, 1215
CciI	TCATGA	1 cut(s)	252
Cfr13I	GGNCC	4 cut(s)	82, 602, 956, 968
Csp6I	GTAC	2 cut(s)	309, 629
CviAII	CATG	7 cut(s)	253, 288, 809, 841, 1264, 1294, 1606
CviQI	GTAC	2 cut(s)	309, 629
DdeI	CTNAG	4 cut(s)	144, 474, 1074, 1197
DpnI	GATC	6 cut(s)	183, 366, 371, 846, 1081, 1221
DpnII	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
DrdI	GACNNNNNNGTC	1 cut(s)	107
DseDI	GACNNNNNNGTC	1 cut(s)	107
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	978, 1282
EarI	CTCTTC	2 cut(s)	978, 1282
EciI	GGCGGA	2 cut(s)	95, 295
Ecl136II	GAGCTC	1 cut(s)	1061
Eco130I	CCWWGG	2 cut(s)	565, 840
Eco24I	GRGCYC	1 cut(s)	1063
Eco31I	GGTCTC	1 cut(s)	115
Eco47I	GGWCC	3 cut(s)	82, 956, 968
Eco53kI	GAGCTC	1 cut(s)	1061
Eco57I	CTGAAG	1 cut(s)	709
Eco81I	CCTNAGG	1 cut(s)	1074
EcoICRI	GAGCTC	1 cut(s)	1061
EcoO109I	RGGNCCY	1 cut(s)	602
EcoRI	GAATTC	2 cut(s)	283, 729
EcoRII	CCWGG	4 cut(s)	667, 987, 1020, 1598
EcoT14I	CCWWGG	2 cut(s)	565, 840
EcoT38I	GRGCYC	1 cut(s)	1063
ErhI	CCWWGG	2 cut(s)	565, 840
FaeI	CATG	7 cut(s)	256, 291, 812, 844, 1267, 1297, 1609
FalI	AAGNNNNNCTT	2 cut(s)	1513, 1545
FatI	CATG	7 cut(s)	252, 287, 808, 840, 1263, 1293, 1605
FbaI	TGATCA	1 cut(s)	1219
FblI	GTMKAC	3 cut(s)	515, 1428, 1594
Fnu4HI	GCNGC	5 cut(s)	6, 78, 278, 414, 1471
FokI	GGATG	7 cut(s)	251, 308, 583, 590, 1004, 1417, 1469
FriOI	GRGCYC	1 cut(s)	1063
Fsp4HI	GCNGC	5 cut(s)	6, 78, 278, 414, 1471
FspBI	CTAG	3 cut(s)	626, 714, 752
GluI	GCNGC	5 cut(s)	6, 78, 278, 414, 1471
HaeIII	GGCC	2 cut(s)	5, 604
HapII	CCGG	2 cut(s)	176, 575
Hin1II	CATG	7 cut(s)	256, 291, 812, 844, 1267, 1297, 1609
HindIII	AAGCTT	1 cut(s)	1247
HinfI	GANTC	6 cut(s)	64, 267, 640, 684, 736, 899
HpaII	CCGG	2 cut(s)	176, 575
HphI	GGTGA	4 cut(s)	112, 120, 191, 518
Hpy166II	GTNNAC	5 cut(s)	516, 694, 1429, 1527, 1595
Hpy188I	TCNGA	9 cut(s)	42, 147, 369, 408, 522, 728, 735, 1163, 1200
Hpy188III	TCNNGA	7 cut(s)	253, 264, 271, 373, 548, 977, 1342
Hpy8I	GTNNAC	5 cut(s)	516, 694, 1429, 1527, 1595
HpyCH4III	ACNGT	5 cut(s)	1033, 1046, 1360, 1426, 1584
HpyCH4IV	ACGT	1 cut(s)	1119
HpyCH4V	TGCA	9 cut(s)	226, 694, 884, 1363, 1460, 1473, 1520, 1562, 1614
HpyF10VI	GCNNNNNNNGC	4 cut(s)	232, 551, 1058, 1611
HpyF3I	CTNAG	4 cut(s)	144, 474, 1074, 1197
HpySE526I	ACGT	1 cut(s)	1119
Hsp92II	CATG	7 cut(s)	256, 291, 812, 844, 1267, 1297, 1609
Ksp22I	TGATCA	1 cut(s)	1219
Kzo9I	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
LmnI	GCTCC	4 cut(s)	375, 988, 1058, 1499
Lsp1109I	GCAGC	2 cut(s)	400, 1457
LweI	GCATC	7 cut(s)	264, 541, 561, 970, 982, 1188, 1447
MaeI	CTAG	3 cut(s)	626, 714, 752
MaeII	ACGT	1 cut(s)	1119
MaeIII	GTNAC	6 cut(s)	506, 737, 835, 916, 1266, 1578
MalI	GATC	6 cut(s)	183, 366, 371, 846, 1081, 1221
MbiI	CCGCTC	1 cut(s)	133
MboI	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
MboII	GAAGA	5 cut(s)	254, 373, 550, 965, 1299
MfeI	CAATTG	1 cut(s)	1146
MhlI	GDGCHC	2 cut(s)	696, 1063
MlyI	GAGTC	3 cut(s)	58, 678, 745
MmeI	TCCRAC	1 cut(s)	793
MseI	TTAA	7 cut(s)	162, 219, 1101, 1124, 1233, 1272, 1305
MslI	CAYNNNNRTG	2 cut(s)	1358, 1377
MspI	CCGG	2 cut(s)	176, 575
MspR9I	CCNGG	5 cut(s)	177, 669, 989, 1022, 1600
MunI	CAATTG	1 cut(s)	1146
Mva1269I	GAATGC	1 cut(s)	1541
MvaI	CCWGG	4 cut(s)	669, 989, 1022, 1600
MvnI	CGCG	1 cut(s)	77
MwoI	GCNNNNNNNGC	4 cut(s)	232, 551, 1058, 1611
NciI	CCSGG	1 cut(s)	177
NcoI	CCATGG	1 cut(s)	840
NdeII	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
NlaIII	CATG	7 cut(s)	256, 291, 812, 844, 1267, 1297, 1609
NlaIV	GGNNCC	4 cut(s)	84, 524, 603, 1048
NmeAIII	GCCGAG	1 cut(s)	114
NmuCI	GTSAC	3 cut(s)	506, 737, 1266
NspI	RCATGY	2 cut(s)	1267, 1297
OliI	CACNNNNGTG	1 cut(s)	1358
PagI	TCATGA	1 cut(s)	252
PasI	CCCWGGG	1 cut(s)	1599
PciI	ACATGT	2 cut(s)	1263, 1293
PctI	GAATGC	1 cut(s)	1541
PfeI	GAWTC	3 cut(s)	267, 640, 899
PflFI	GACNNNGTC	1 cut(s)	259
PkrI	GCNGC	5 cut(s)	7, 79, 279, 415, 1472
PleI	GAGTC	3 cut(s)	58, 678, 744
PpsI	GAGTC	3 cut(s)	58, 678, 744
Ppu21I	YACGTR	1 cut(s)	1120
PscI	ACATGT	2 cut(s)	1263, 1293
PshBI	ATTAAT	1 cut(s)	1305
PsiI	TTATAA	3 cut(s)	348, 1245, 1446
Psp124BI	GAGCTC	1 cut(s)	1063
Psp6I	CCWGG	4 cut(s)	667, 987, 1020, 1598
PspGI	CCWGG	4 cut(s)	667, 987, 1020, 1598
PspN4I	GGNNCC	4 cut(s)	84, 524, 603, 1048
PspPI	GGNCC	4 cut(s)	82, 602, 956, 968
PstI	CTGCAG	1 cut(s)	1616
PsyI	GACNNNGTC	1 cut(s)	259
RsaI	GTAC	2 cut(s)	310, 630
RsaNI	GTAC	2 cut(s)	309, 629
RseI	CAYNNNNRTG	2 cut(s)	1358, 1377
SacI	GAGCTC	1 cut(s)	1063
SaqAI	TTAA	7 cut(s)	162, 219, 1101, 1124, 1233, 1272, 1305
SatI	GCNGC	5 cut(s)	6, 78, 278, 414, 1471
Sau3AI	GATC	6 cut(s)	181, 364, 369, 844, 1079, 1219
Sau96I	GGNCC	4 cut(s)	82, 602, 956, 968
SchI	GAGTC	3 cut(s)	58, 678, 745
ScrFI	CCNGG	5 cut(s)	177, 669, 989, 1022, 1600
SduI	GDGCHC	2 cut(s)	696, 1063
SfaNI	GCATC	7 cut(s)	264, 541, 561, 970, 982, 1188, 1447
SfcI	CTRYAG	1 cut(s)	1612
SinI	GGWCC	3 cut(s)	82, 956, 968
SmiMI	CAYNNNNRTG	2 cut(s)	1358, 1377
SpeI	ACTAGT	2 cut(s)	625, 713
SsiI	CCGC	9 cut(s)	6, 77, 80, 123, 131, 277, 280, 966, 1050
SspMI	CTAG	3 cut(s)	626, 714, 752
SstI	GAGCTC	1 cut(s)	1063
StyD4I	CCNGG	5 cut(s)	175, 667, 987, 1020, 1598
StyI	CCWWGG	2 cut(s)	565, 840
TaaI	ACNGT	5 cut(s)	1033, 1046, 1360, 1426, 1584
TaiI	ACGT	1 cut(s)	1122
TaqI	TCGA	4 cut(s)	62, 99, 682, 1013
TauI	GCSGC	3 cut(s)	8, 80, 280
TfiI	GAWTC	3 cut(s)	267, 640, 899
Tru1I	TTAA	7 cut(s)	162, 219, 1101, 1124, 1233, 1272, 1305
Tru9I	TTAA	7 cut(s)	162, 219, 1101, 1124, 1233, 1272, 1305
TscAI	CASTG	3 cut(s)	1114, 1363, 1621
TseFI	GTSAC	3 cut(s)	506, 737, 1266
TseI	GCWGC	2 cut(s)	413, 1470
Tsp45I	GTSAC	3 cut(s)	506, 737, 1266
TspDTI	ATGAA	8 cut(s)	255, 276, 425, 663, 797, 912, 1031, 1361
TspGWI	ACGGA	1 cut(s)	677
TspRI	CASTG	3 cut(s)	1114, 1363, 1621
Tth111I	GACNNNGTC	1 cut(s)	259
VneI	GTGCAC	1 cut(s)	692
VpaK11BI	GGWCC	3 cut(s)	82, 956, 968
VspI	ATTAAT	1 cut(s)	1305
XapI	RAATTY	4 cut(s)	283, 400, 462, 729
XceI	RCATGY	2 cut(s)	1267, 1297
XmiI	GTMKAC	3 cut(s)	515, 1428, 1594
XspI	CTAG	3 cut(s)	626, 714, 752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.