Rroxscaffold_4G00291090

Beta-hexosaminidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0013206
Physical Location & Seq
Reverse (-)
11548482 .. 11554111
5630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00291090.1

Sequence Viewer

Length: 1437 bp
ATGCATTTTAATTACCAACCGAAACAACCGCACTCTAAAACATGCGATCAGCATCAGAGACCACACCACTGTGTTTGTCTCTACTTATCATCATCTTCCAAATGTTCCACCTACTATAAGAGCTCTCTTATTAATCAAACATTCAAACCCAACAATCCCATCTGCCCCAGACCATCCATGGCGACTTCCTTTGTCTTGTTCCTATTCGTTTTCTCAACCGCGCTCTCTTTTTCTCAGGCCAAAGTCAAAGGTCCCATCACGTATTTATGGCCATTGCCGGCGGAGTTTACTTCCGGCAACCAGACGCTCACCGTCGACCCGGCGCTGTCGCTCGTCGTCGGCGGGAACGGGGGCAAGTCCGTCATCTTGAAGGAGGGGTTTGATCGGTACAAGGCGATTATATTCAAGAACAGTAATGGGGTTACTGGGATTGATAGAATGAAGGCCAAGGGAGAGAGCTATGATATTAGTAAAGTCAGGGTTGTGGTGCAGTCGGCGAGCGAAGATCTTAATCTTGGTGTGGATGAGAGCTATACTCTGTTTGTGTTGAAGAAAGATGGGAAAGCTATTGTTGGGGAGGCCACTATTGAGGCAAACACAGTGTATGGCATCAATGTTATGGCAGAAGTAGATGTCCCTGGTCATGCACAATCATGGGGCACTGGATATCCTGATCTCTGGCCTTCCTCTTCCTGCACGGAGCCTCTTGATGTTTCAAAGAATTTTACTTTCGACGTGCTTTCTGGCATTCTGACAGATTTGAGAAAGATTTTCCCCTTCGAGCTCTTCCACTTGGGTGGTGATGAAGTTAATACAACTTGCTGGGAAGTTACTCCACATGTAAAGAAATGGCTTAAGCAACAGGACATGACTGCCAAAGACGCCTACCAATATTTTGTTCTCAAAGCACAAGAAATAGCAATTTCCAAAAATTGGACCCCGGTCAACTGGGAAGAAACCTTCAACACCTTCCCAACGAAGCTCAATCCAAAGACTGTAGTGCATAACTGGTTGGGCGGAGGGGTTTGTCCAAAGGCTGTTGATCAAGGTTTCAGATGTATTTTCAGCAATCAAGGTGTTTGGTATCTTGACCATCTAGATGTCCCTTGGGATGCTACATATAATGCTGACCCACTTGAAGGAATAGATGATTCTTCCAAGCAAGAGCTTGTCCTTGGAGGAGAAGTATGCATGTGGGCTGAGACTGCTGATCCATCAAATGTTCAGCAAACAATATGGCCTCGAGCTGCAGCAGCTGCAGAGCGCCTGTGGAGCAGAAAGGAGTCAACTTCTGGAAAAAGTAGTAATGAAACTGCGCTACCTCGGCTACACTACTTCAGATGCCTCTTGAATAGGCGTGGAGTTCAAGCTGCTCCAGTTGAAAACTTCTACGCTCGCAGTGCTCCAACTGGTGCTGGCTCCTGTTATGTTCAATAA

Protein Analysis

478

Amino Acids

53.18

Weight (kDa)

6.83

Isoelectric Point (pI)

36.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycohydro_20b2 PF14845 89 - 204 1.1e-15 beta-acetyl hexosaminidase like
Glyco_hydro_20 PF00728 202 - 426 4e-48 Glycosyl hydrolase family 20, catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013206)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65590 AT3G55260
fragaria_vesca FvH4_7g21240
malus_domestica MD01G1120700.v1.1 MD07G1190100.v1.1
prunus_persica Prupe.2G227600_v2.0.a1 Prupe.2G227600_v2.0.a1 Prupe.2G228000_v2.0.a1
pyrus_communis pycom01g14730 pycom07g17970
rosa_chinensis RchiOBHm_Chr1g0365681
rosa_laevigata RLG00000027418
rosa_roxburghii Rroxscaffold_4G00291090
rosa_samantha Rh1AG331300 Rh1BG292800 Rh1CG309300 Rh1DG324300
rosa_wichuraiana Rw1G029430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 933
AccI GTMKAC 1 cut(s) 315
AccII CGCG 1 cut(s) 221
AciI CCGC 5 cut(s) 29, 219, 281, 342, 1017
AclWI GGATC 1 cut(s) 1205
AcoI YGGCCR 1 cut(s) 269
AcsI RAATTY 1 cut(s) 721
AcuI CTGAAG 1 cut(s) 1321
AcyI GRCGYC 1 cut(s) 882
AfaI GTAC 1 cut(s) 389
AfiI CCNNNNNNNGG 2 cut(s) 933, 1139
AflII CTTAAG 1 cut(s) 854
AflIII ACRYGT 1 cut(s) 838
AjiI CACGTC 1 cut(s) 736
AjnI CCWGG 1 cut(s) 637
AjuI GAANNNNNNNTTGG 2 cut(s) 882, 914
AleI CACNNNNGTG 2 cut(s) 69, 795
Alw21I GWGCWC 3 cut(s) 125, 786, 1405
Alw26I GTCTC 3 cut(s) 52, 83, 1196
AlwI GGATC 1 cut(s) 1205
AlwNI CAGNNNCTG 1 cut(s) 1256
Ama87I CYCGRG 1 cut(s) 1242
AoxI GGCC 6 cut(s) 237, 269, 444, 579, 680, 1238
ApeKI GCWGC 5 cut(s) 1247, 1250, 1253, 1256, 1370
ApoI RAATTY 1 cut(s) 721
AseI ATTAAT 1 cut(s) 132
AspLEI GCGC 4 cut(s) 223, 325, 1266, 1318
AspS9I GGNCC 2 cut(s) 251, 936
AsuC2I CCSGG 2 cut(s) 320, 941
AsuHPI GGTGA 2 cut(s) 301, 812
AvaI CYCGRG 1 cut(s) 1242
AvaII GGWCC 2 cut(s) 251, 936
BaeGI GKGCMC 1 cut(s) 662
BalI TGGCCA 1 cut(s) 271
BanII GRGCYC 2 cut(s) 125, 786
Bbv12I GWGCWC 3 cut(s) 125, 786, 1405
BbvI GCAGC 5 cut(s) 1234, 1243, 1262, 1265, 1357
BccI CCATC 6 cut(s) 167, 181, 263, 551, 1101, 1222
BciT130I CCWGG 1 cut(s) 639
BclI TGATCA 1 cut(s) 1042
BcnI CCSGG 2 cut(s) 320, 941
BcoDI GTCTC 3 cut(s) 52, 83, 1196
BfaI CTAG 1 cut(s) 1097
BfmI CTRYAG 3 cut(s) 996, 1248, 1257
BfoI RGCGCY 2 cut(s) 326, 1267
BfrI CTTAAG 1 cut(s) 854
BglII AGATCT 1 cut(s) 505
BisI GCNGC 5 cut(s) 1248, 1251, 1254, 1257, 1371
BlsI GCNGC 5 cut(s) 1249, 1252, 1255, 1258, 1372
Bme1390I CCNGG 3 cut(s) 320, 639, 941
Bme18I GGWCC 2 cut(s) 251, 936
BmeT110I CYCGRG 1 cut(s) 1242
BmgBI CACGTC 1 cut(s) 736
BmgT120I GGNCC 2 cut(s) 251, 936
BmiI GGNNCC 4 cut(s) 253, 702, 938, 1420
BmrFI CCNGG 3 cut(s) 320, 639, 941
BmrI ACTGGG 2 cut(s) 435, 958
BmsI GCATC 4 cut(s) 61, 618, 1102, 1331
BmuI ACTGGG 2 cut(s) 435, 958
BoxI GACNNNNGTC 1 cut(s) 941
BplI GAGNNNNNCTC 2 cut(s) 520, 552
BpmI CTGGAG 1 cut(s) 1359
BpuMI CCSGG 2 cut(s) 320, 941
BsaAI YACGTR 1 cut(s) 261
BsaBI GATNNNNATC 2 cut(s) 51, 510
BsaHI GRCGYC 1 cut(s) 882
BsaI GGTCTC 1 cut(s) 52
BsaJI CCNNGG 7 cut(s) 177, 447, 637, 939, 1106, 1174, 1322
BsaXI ACNNNNNCTCC 2 cut(s) 1170, 1200
Bsc4I CCNNNNNNNGG 2 cut(s) 933, 1139
Bse118I RCCGGY 1 cut(s) 277
Bse1I ACTGG 6 cut(s) 430, 667, 953, 1013, 1376, 1414
Bse3DI GCAATG 1 cut(s) 272
Bse8I GATNNNNATC 2 cut(s) 51, 510
BseBI CCWGG 1 cut(s) 639
BseDI CCNNGG 7 cut(s) 177, 447, 637, 939, 1106, 1174, 1322
BseGI GGATG 3 cut(s) 173, 529, 1117
BseJI GATNNNNATC 2 cut(s) 51, 510
BseLI CCNNNNNNNGG 2 cut(s) 933, 1139
BseMI GCAATG 1 cut(s) 272
BseMII CTCAG 2 cut(s) 248, 1191
BseNI ACTGG 6 cut(s) 430, 667, 953, 1013, 1376, 1414
BseRI GAGGAG 1 cut(s) 1194
BseSI GKGCMC 1 cut(s) 662
BseXI GCAGC 5 cut(s) 1234, 1243, 1262, 1265, 1357
BseYI CCCAGC 1 cut(s) 822
BsgI GTGCAG 2 cut(s) 509, 679
Bsh1236I CGCG 1 cut(s) 221
BshFI GGCC 6 cut(s) 239, 271, 446, 581, 682, 1240
BsiHKAI GWGCWC 3 cut(s) 125, 786, 1405
BsiHKCI CYCGRG 1 cut(s) 1242
BsiSI CCGG 4 cut(s) 278, 294, 320, 941
BslFI GGGAC 3 cut(s) 237, 620, 1088
BslI CCNNNNNNNGG 2 cut(s) 933, 1139
BsmAI GTCTC 3 cut(s) 52, 83, 1196
BsmFI GGGAC 3 cut(s) 237, 620, 1088
BsmI GAATGC 1 cut(s) 747
BsnI GGCC 6 cut(s) 239, 271, 446, 581, 682, 1240
Bso31I GGTCTC 1 cut(s) 52
BsoBI CYCGRG 1 cut(s) 1242
Bsp1286I GDGCHC 4 cut(s) 125, 662, 786, 1405
Bsp143I GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
Bsp19I CCATGG 1 cut(s) 177
BspACI CCGC 5 cut(s) 29, 219, 281, 342, 1017
BspANI GGCC 6 cut(s) 239, 271, 446, 581, 682, 1240
BspCNI CTCAG 2 cut(s) 247, 1192
BspFNI CGCG 1 cut(s) 221
BspLI GGNNCC 4 cut(s) 253, 702, 938, 1420
BspMAI CTGCAG 2 cut(s) 1252, 1261
BspPI GGATC 1 cut(s) 1205
BspQI GCTCTTC 1 cut(s) 791
BspTI CTTAAG 1 cut(s) 854
BspTNI GGTCTC 1 cut(s) 52
BsrDI GCAATG 1 cut(s) 272
BsrFI RCCGGY 1 cut(s) 277
BsrI ACTGG 6 cut(s) 430, 667, 953, 1013, 1376, 1414
BssAI RCCGGY 1 cut(s) 277
BssECI CCNNGG 7 cut(s) 177, 447, 637, 939, 1106, 1174, 1322
BssMI GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
BssNI GRCGYC 1 cut(s) 882
BssT1I CCWWGG 4 cut(s) 177, 447, 1106, 1174
Bst2UI CCWGG 1 cut(s) 639
Bst4CI ACNGT 5 cut(s) 71, 313, 413, 601, 997
Bst6I CTCTTC 2 cut(s) 694, 791
BstACI GRCGYC 1 cut(s) 882
BstAFI CTTAAG 1 cut(s) 854
BstAPI GCANNNNNTGC 1 cut(s) 1256
BstBAI YACGTR 1 cut(s) 261
BstC8I GCNNGC 4 cut(s) 279, 499, 1396, 1417
BstDEI CTNAG 2 cut(s) 234, 1200
BstDSI CCRYGG 1 cut(s) 177
BstF5I GGATG 3 cut(s) 173, 529, 1117
BstFNI CGCG 1 cut(s) 221
BstH2I RGCGCY 2 cut(s) 326, 1267
BstHHI GCGC 4 cut(s) 223, 325, 1266, 1318
BstKTI GATC 6 cut(s) 49, 385, 508, 676, 1045, 1213
BstMAI GTCTC 3 cut(s) 52, 83, 1196
BstMBI GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
BstMWI GCNNNNNNNGC 7 cut(s) 881, 1205, 1253, 1256, 1272, 1324, 1400
BstNI CCWGG 1 cut(s) 639
BstNSI RCATGY 3 cut(s) 45, 842, 1195
BstPAI GACNNNNGTC 1 cut(s) 941
BstSCI CCNGG 3 cut(s) 318, 637, 939
BstSFI CTRYAG 3 cut(s) 996, 1248, 1257
BstSLI GKGCMC 1 cut(s) 662
BstUI CGCG 1 cut(s) 221
BstV1I GCAGC 5 cut(s) 1234, 1243, 1262, 1265, 1357
BstX2I RGATCY 1 cut(s) 505
BstXI CCANNNNNNTGG 1 cut(s) 797
BstYI RGATCY 1 cut(s) 505
BsuRI GGCC 6 cut(s) 239, 271, 446, 581, 682, 1240
BtgI CCRYGG 1 cut(s) 177
BtrI CACGTC 1 cut(s) 736
BtsCI GGATG 3 cut(s) 173, 529, 1117
BtsI GCAGTG 1 cut(s) 1405
BtsIMutI CAGTG 4 cut(s) 67, 606, 660, 1405
Cac8I GCNNGC 4 cut(s) 279, 499, 1396, 1417
CaiI CAGNNNCTG 1 cut(s) 1256
CfoI GCGC 4 cut(s) 223, 325, 1266, 1318
Cfr10I RCCGGY 1 cut(s) 277
Cfr13I GGNCC 2 cut(s) 251, 936
CseI GACGC 2 cut(s) 313, 890
Csp6I GTAC 1 cut(s) 388
CspCI CAANNNNNGTGG 2 cut(s) 56, 91
CviAII CATG 7 cut(s) 42, 178, 644, 654, 839, 868, 1192
CviQI GTAC 1 cut(s) 388
DdeI CTNAG 2 cut(s) 234, 1200
DpnI GATC 6 cut(s) 48, 384, 507, 675, 1044, 1212
DpnII GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
EaeI YGGCCR 1 cut(s) 269
Eam1104I CTCTTC 2 cut(s) 694, 791
EarI CTCTTC 2 cut(s) 694, 791
EciI GGCGGA 2 cut(s) 296, 1032
Ecl136II GAGCTC 2 cut(s) 123, 784
Eco130I CCWWGG 4 cut(s) 177, 447, 1106, 1174
Eco24I GRGCYC 2 cut(s) 125, 786
Eco31I GGTCTC 1 cut(s) 52
Eco32I GATATC 1 cut(s) 668
Eco47I GGWCC 2 cut(s) 251, 936
Eco53kI GAGCTC 2 cut(s) 123, 784
Eco57I CTGAAG 1 cut(s) 1321
Eco88I CYCGRG 1 cut(s) 1242
EcoICRI GAGCTC 2 cut(s) 123, 784
EcoO109I RGGNCCY 1 cut(s) 251
EcoRII CCWGG 1 cut(s) 637
EcoRV GATATC 1 cut(s) 668
EcoT14I CCWWGG 4 cut(s) 177, 447, 1106, 1174
EcoT22I ATGCAT 2 cut(s) 6, 1193
EcoT38I GRGCYC 2 cut(s) 125, 786
ErhI CCWWGG 4 cut(s) 177, 447, 1106, 1174
FaeI CATG 7 cut(s) 45, 181, 647, 657, 842, 871, 1195
FaqI GGGAC 3 cut(s) 237, 620, 1088
FatI CATG 7 cut(s) 41, 177, 643, 653, 838, 867, 1191
FauI CCCGC 1 cut(s) 335
FbaI TGATCA 1 cut(s) 1042
FblI GTMKAC 1 cut(s) 315
Fnu4HI GCNGC 5 cut(s) 1248, 1251, 1254, 1257, 1371
FokI GGATG 3 cut(s) 160, 536, 1124
FriOI GRGCYC 2 cut(s) 125, 786
Fsp4HI GCNGC 5 cut(s) 1248, 1251, 1254, 1257, 1371
FspBI CTAG 1 cut(s) 1097
GlaI GCGC 4 cut(s) 222, 324, 1265, 1317
GluI GCNGC 5 cut(s) 1248, 1251, 1254, 1257, 1371
GsaI CCCAGC 1 cut(s) 826
GsuI CTGGAG 1 cut(s) 1359
HaeII RGCGCY 2 cut(s) 326, 1267
HaeIII GGCC 6 cut(s) 239, 271, 446, 581, 682, 1240
HapII CCGG 4 cut(s) 278, 294, 320, 941
HgaI GACGC 2 cut(s) 313, 890
HhaI GCGC 4 cut(s) 223, 325, 1266, 1318
Hin1I GRCGYC 1 cut(s) 882
Hin1II CATG 7 cut(s) 45, 181, 647, 657, 842, 871, 1195
Hin6I GCGC 4 cut(s) 221, 323, 1264, 1316
HinP1I GCGC 4 cut(s) 221, 323, 1264, 1316
HincII GTYRAC 3 cut(s) 316, 946, 1287
HindII GTYRAC 3 cut(s) 316, 946, 1287
HinfI GANTC 2 cut(s) 1151, 1283
HpaII CCGG 4 cut(s) 278, 294, 320, 941
HphI GGTGA 2 cut(s) 301, 812
Hpy166II GTNNAC 4 cut(s) 288, 316, 946, 1287
Hpy188I TCNGA 4 cut(s) 57, 753, 1055, 1340
Hpy188III TCNNGA 8 cut(s) 367, 406, 671, 707, 1088, 1097, 1293, 1348
Hpy8I GTNNAC 4 cut(s) 288, 316, 946, 1287
Hpy99I CGWCG 4 cut(s) 317, 338, 341, 737
HpyAV CCTTC 7 cut(s) 364, 436, 693, 787, 970, 979, 1133
HpyCH4III ACNGT 5 cut(s) 71, 313, 413, 601, 997
HpyCH4IV ACGT 2 cut(s) 260, 735
HpyCH4V TGCA 8 cut(s) 4, 490, 647, 696, 1003, 1191, 1250, 1259
HpyF10VI GCNNNNNNNGC 7 cut(s) 881, 1205, 1253, 1256, 1272, 1324, 1400
HpyF3I CTNAG 2 cut(s) 234, 1200
HpySE526I ACGT 2 cut(s) 260, 735
Hsp92I GRCGYC 1 cut(s) 882
Hsp92II CATG 7 cut(s) 45, 181, 647, 657, 842, 871, 1195
HspAI GCGC 4 cut(s) 221, 323, 1264, 1316
KroI GCCGGC 1 cut(s) 277
KroNI GCCGGC 1 cut(s) 279
Ksp22I TGATCA 1 cut(s) 1042
Kzo9I GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
LguI GCTCTTC 1 cut(s) 791
LmnI GCTCC 5 cut(s) 700, 1272, 1378, 1408, 1424
Lsp1109I GCAGC 5 cut(s) 1234, 1243, 1262, 1265, 1357
LweI GCATC 4 cut(s) 61, 618, 1102, 1331
MaeI CTAG 1 cut(s) 1097
MaeII ACGT 2 cut(s) 260, 735
MaeIII GTNAC 2 cut(s) 421, 829
MalI GATC 6 cut(s) 48, 384, 507, 675, 1044, 1212
MboI GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
MboII GAAGA 7 cut(s) 87, 515, 562, 681, 778, 965, 1146
MflI RGATCY 1 cut(s) 505
MhlI GDGCHC 4 cut(s) 125, 662, 786, 1405
MlsI TGGCCA 1 cut(s) 271
MluCI AATT 4 cut(s) 10, 721, 921, 931
MluNI TGGCCA 1 cut(s) 271
MlyI GAGTC 1 cut(s) 1292
MmeI TCCRAC 1 cut(s) 1430
Mox20I TGGCCA 1 cut(s) 271
Mph1103I ATGCAT 2 cut(s) 6, 1193
MroNI GCCGGC 1 cut(s) 277
MscI TGGCCA 1 cut(s) 271
MseI TTAA 5 cut(s) 9, 132, 510, 810, 855
MslI CAYNNNNRTG 4 cut(s) 69, 652, 795, 1098
Msp20I TGGCCA 1 cut(s) 271
MspA1I CMGCKG 1 cut(s) 1256
MspCI CTTAAG 1 cut(s) 854
MspI CCGG 4 cut(s) 278, 294, 320, 941
MspR9I CCNGG 3 cut(s) 320, 639, 941
Mva1269I GAATGC 1 cut(s) 747
MvaI CCWGG 1 cut(s) 639
MvnI CGCG 1 cut(s) 221
MwoI GCNNNNNNNGC 7 cut(s) 881, 1205, 1253, 1256, 1272, 1324, 1400
NaeI GCCGGC 1 cut(s) 279
NciI CCSGG 2 cut(s) 320, 941
NcoI CCATGG 1 cut(s) 177
NdeII GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
NgoMIV GCCGGC 1 cut(s) 277
NlaIII CATG 7 cut(s) 45, 181, 647, 657, 842, 871, 1195
NlaIV GGNNCC 4 cut(s) 253, 702, 938, 1420
NmeAIII GCCGAG 1 cut(s) 1303
NsiI ATGCAT 2 cut(s) 6, 1193
NspI RCATGY 3 cut(s) 45, 842, 1195
OliI CACNNNNGTG 2 cut(s) 69, 795
PaeR7I CTCGAG 1 cut(s) 1242
PciI ACATGT 1 cut(s) 838
PciSI GCTCTTC 1 cut(s) 791
PctI GAATGC 1 cut(s) 747
PdiI GCCGGC 1 cut(s) 279
PfeI GAWTC 1 cut(s) 1151
PflMI CCANNNNNTGG 1 cut(s) 933
PkrI GCNGC 5 cut(s) 1249, 1252, 1255, 1258, 1372
PleI GAGTC 1 cut(s) 1291
PpsI GAGTC 1 cut(s) 1291
Ppu21I YACGTR 1 cut(s) 261
PpuMI RGGWCCY 1 cut(s) 251
PscI ACATGT 1 cut(s) 838
PshAI GACNNNNGTC 1 cut(s) 941
PshBI ATTAAT 1 cut(s) 132
Psp124BI GAGCTC 2 cut(s) 125, 786
Psp5II RGGWCCY 1 cut(s) 251
Psp6I CCWGG 1 cut(s) 637
PspFI CCCAGC 1 cut(s) 822
PspGI CCWGG 1 cut(s) 637
PspN4I GGNNCC 4 cut(s) 253, 702, 938, 1420
PspPI GGNCC 2 cut(s) 251, 936
PspPPI RGGWCCY 1 cut(s) 251
PspXI VCTCGAGB 1 cut(s) 1242
PstI CTGCAG 2 cut(s) 1252, 1261
PstNI CAGNNNCTG 1 cut(s) 1256
PsuI RGATCY 1 cut(s) 505
PvuII CAGCTG 1 cut(s) 1256
RsaI GTAC 1 cut(s) 389
RsaNI GTAC 1 cut(s) 388
RseI CAYNNNNRTG 4 cut(s) 69, 652, 795, 1098
SacI GAGCTC 2 cut(s) 125, 786
SalI GTCGAC 1 cut(s) 314
SapI GCTCTTC 1 cut(s) 791
SaqAI TTAA 5 cut(s) 9, 132, 510, 810, 855
SatI GCNGC 5 cut(s) 1248, 1251, 1254, 1257, 1371
Sau3AI GATC 6 cut(s) 46, 382, 505, 673, 1042, 1210
Sau96I GGNCC 2 cut(s) 251, 936
SchI GAGTC 1 cut(s) 1292
ScrFI CCNGG 3 cut(s) 320, 639, 941
SduI GDGCHC 4 cut(s) 125, 662, 786, 1405
SfaNI GCATC 4 cut(s) 61, 618, 1102, 1331
SfcI CTRYAG 3 cut(s) 996, 1248, 1257
Sfr274I CTCGAG 1 cut(s) 1242
SinI GGWCC 2 cut(s) 251, 936
SlaI CTCGAG 1 cut(s) 1242
SmiMI CAYNNNNRTG 4 cut(s) 69, 652, 795, 1098
SmlI CTYRAG 2 cut(s) 854, 1242
SmoI CTYRAG 2 cut(s) 854, 1242
Sse9I AATT 4 cut(s) 10, 721, 921, 931
SsiI CCGC 5 cut(s) 29, 219, 281, 342, 1017
SspI AATATT 1 cut(s) 893
SspMI CTAG 1 cut(s) 1097
SstI GAGCTC 2 cut(s) 125, 786
StyD4I CCNGG 3 cut(s) 318, 637, 939
StyI CCWWGG 4 cut(s) 177, 447, 1106, 1174
TaaI ACNGT 5 cut(s) 71, 313, 413, 601, 997
TaiI ACGT 2 cut(s) 263, 738
TaqI TCGA 4 cut(s) 315, 732, 780, 1243
TasI AATT 4 cut(s) 10, 721, 921, 931
TfiI GAWTC 1 cut(s) 1151
Tru1I TTAA 5 cut(s) 9, 132, 510, 810, 855
Tru9I TTAA 5 cut(s) 9, 132, 510, 810, 855
TscAI CASTG 4 cut(s) 74, 606, 667, 1405
TseI GCWGC 5 cut(s) 1247, 1250, 1253, 1256, 1370
TspDTI ATGAA 3 cut(s) 455, 819, 1323
TspGWI ACGGA 2 cut(s) 349, 713
TspRI CASTG 4 cut(s) 74, 606, 667, 1405
Van91I CCANNNNNTGG 1 cut(s) 933
Vha464I CTTAAG 1 cut(s) 854
VpaK11BI GGWCC 2 cut(s) 251, 936
VspI ATTAAT 1 cut(s) 132
XapI RAATTY 1 cut(s) 721
XbaI TCTAGA 1 cut(s) 1096
XceI RCATGY 3 cut(s) 45, 842, 1195
XcmI CCANNNNNNNNNTGG 1 cut(s) 175
XhoI CTCGAG 1 cut(s) 1242
XmiI GTMKAC 1 cut(s) 315
XspI CTAG 1 cut(s) 1097
Zsp2I ATGCAT 2 cut(s) 6, 1193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.