Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0007250

Physical Location & Seq

Genomic Coordinates Forward (+)

11576361 .. 11584634

Gene Structure 8274 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00291110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGAGATAACCTACGCATCCCCAAGCAACTCCGATTTCGCGGGCGGATCCTCCTCCATGCCGACGACGACCCGACCCGTCCGGATTATCCCCTTGCAGCACCCGGAAACGACGTCGGTGTCATCGTCGTCCTCCTCAAATGCGTCGCCGCTGTGGGCCGCGCTGTCGAGGTGGAAATCGAAGGTCGTCAGCATGACGTGGATTGAGTGGCTGGAGCTGTTCCTGCCTTGCTTCCGGTGGATTCGGACCTACAAATGGCGCGAGTATCTCCAGGTCGATCTCATGGCCGGAATGACCGTCGGCGTCATGCTCGTTCCTCAGGCAATGTCTTATGCAAAATTGGCTGGGCTTGAACCCATATACGGACTTTACTCTGGTTTTGTACCTTTATTTGTGTATGCTATATTTGGCTCATCTCGTCAGCTAGCTGTTGGTCCAGTAGCATTGGTTTCACTCCTAGTCTCCAATGTTTTAAGTGGCATCGTTGATTCTTCCGATGCGTTATACACTGAGCTGGCAATATTATTGGCACTCATGGTTGGGATCATGGAATGCATTTTGGGGCTTTTAAGGCTTGGATGGATTATTCGCTTCATCAGCCACTCAGTCATTTCTGGTTTTACAACTGCTTCAGCCATTGTGATTGCTTTATCTCAAGCAAAATACTTCTTGGGATATGATGTAGAACGAAGTAGCGAGATTGTGCCACTGATTAAGAGCATTATATCTGGAGTTGATGCGCTATTTGGTAACTTGGCTGTTTTACAACTTAGGTTCAATGTGTTGGCTTGTGTTATACTTGGAAAGACAAGGAAACACTTGCGTTTCCTGAGAGCAGCAGGTCCCCTCACTGCAGTCCTTTTGGGCACTATTTTTGTAAAAATATTTAATCCATCTTCCATATCCTTGGTAGGAGACATACCACAGGGCCTTCCATCATTTTCCATCCCTAAAGCTTTTGGATATGCTACATCTTTGATTCCGACTGCGCTTCTCATTACTGGTGTAGCTATTTTGGAATCTGTGGGCATTGCAAAAGCATTAGCAGCAAAGAATGGCTATGAGTTGGATTCAAATCAAGAGTTGTTTGGTCTTGGGGTGGCAAATATTTTTGGTTCATTTTTTTCTGCATACCCTACAACAGGTTCCTTTTCTAGGTCAGCTGTGAATAATGAAAGTGGAGCAAAAACTGGCTTATCTGGAATTGTTATGGGATTTATAATGGGGTGTGCCCTCCTATTTATGACTACACTGTTTGAATCCATACCCCAGTGTGCTCTAGCTGCCATTGTCATTTCTGCTGTAATAGGCCTGGTGGATTATGAGGAGGCTATATTTTTATGGCGAGTTGATAAGAAAGATTTTCTTCTTTGGACCATCACAAGCAGTACAACTTTGTTCCTTGGCATTGAGATTGGCGTCCTTGTCGGGGTTGGTGTTTCACTTGCATTTGTTATATATGAATCAGCAAATCCCCATATTGCTGTCTTGGGGCGTCTCCCAGGTACCACTGTTTATAGAAATACACAACAATATCCAGAAGCATATACATACAATGGAATTGTGATTGTTCGGATTGATGCACCTATTTACTTTGCTAACATTAGTTACATAAAAGACAGGCTACGTGAATATGAAGTGGAAGTTGATAGATCTACTAGCCGTGGACCAGAAGTTGAAAGAATTTATTTTGTGATCATAGAGATGGCACCTGTAACATATATAGATTCAAGTGGTGTCCAAGCTTTAAGAGAGTTGCATCAGGAGTACAAGTTGCGGGATATCCAGATTGCCATTTCAAATCTCAATCGAGAAACTCTGATGACCTTATCAAGATCAGGCGTAGTAGAGCTGATTGGTAAGGAGTGGTTCTTCGTAAGAGTGCACGATGCTGTTCAAGTTTGCCTTCAGCATGTTCAGAGCTTAAAAGAGACACCTAAGATGGCCGACCCTCTGACTGAAGAGAGGCAGAGTTCCTTCCAGAGATTTCTTAGACAAAGAGCAGAGGATTCATCACTATCCGAGCTGGAGTCTGGGAACCAGACATCTTTAGTTACCAAGGAAAGCGACCCTCAGTTGGAGCCTCTATTGTCTCGAAAATCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

702

Amino Acids

76.99

Weight (kDa)

6.25

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfate_transp	PF00916	90 - 461	5.7e-119	Sulfate permease family
STAS	PF01740	512 - 631	3.5e-24	STAS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007250)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12520 AT3G12520 AT3G12520 AT5G13550
fragaria_vesca	FvH4_7g21210 FvH4_7g21210 FvH4_7g21210
malus_domestica	MD07G1189900.v1.1
prunus_persica	Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1
pyrus_communis	pycom01g14690 pycom07g17950
rosa_chinensis	RchiOBHm_Chr1g0365661
rosa_laevigata	RLG00000027419
rosa_multiflora	Rmu_sc0002093.1_g000005
rosa_roxburghii	Rroxscaffold_4G00291110
rosa_rugosa	Rorug01G0322400 Rorug01G0322400
rosa_samantha	Rh1AG331100 Rh1BG292500 Rh1CG309100 Rh1DG324100
rosa_wichuraiana	Rw1G029410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1220
AasI	GACNNNNNNGTC	1 cut(s)	118
AatII	GACGTC	1 cut(s)	116
Acc36I	ACCTGC	1 cut(s)	830
Acc65I	GGTACC	1 cut(s)	1505
AccB1I	GGYRCC	2 cut(s)	1505, 1708
AccII	CGCG	3 cut(s)	41, 161, 261
AccIII	TCCGGA	1 cut(s)	81
AciI	CCGC	5 cut(s)	41, 45, 149, 159, 1777
AclWI	GGATC	3 cut(s)	42, 55, 551
AcoI	YGGCCR	2 cut(s)	285, 1944
AcsI	RAATTY	1 cut(s)	1683
AcuI	CTGAAG	3 cut(s)	615, 1892, 1980
AcyI	GRCGYC	4 cut(s)	113, 303, 1419, 1495
AfaI	GTAC	4 cut(s)	384, 1390, 1507, 1769
AfiI	CCNNNNNNNGG	6 cut(s)	255, 362, 1142, 1155, 1429, 2077
AgsI	TTSAA	8 cut(s)	353, 778, 1074, 1259, 1679, 1731, 1800, 1898
AjiI	CACGTC	1 cut(s)	198
AjnI	CCWGG	3 cut(s)	270, 1311, 1501
Alw21I	GWGCWC	2 cut(s)	1279, 1887
Alw26I	GTCTC	5 cut(s)	466, 909, 1502, 1925, 2097
Alw44I	GTGCAC	1 cut(s)	1883
AlwI	GGATC	3 cut(s)	42, 55, 551
Aor13HI	TCCGGA	1 cut(s)	81
AoxI	GGCC	5 cut(s)	156, 285, 928, 1309, 1944
ApaLI	GTGCAC	1 cut(s)	1883
ApeKI	GCWGC	4 cut(s)	97, 836, 1046, 1283
ApoI	RAATTY	1 cut(s)	1683
Asp700I	GAANNNNTTC	1 cut(s)	2101
Asp718I	GGTACC	1 cut(s)	1505
AspLEI	GCGC	4 cut(s)	163, 261, 742, 991
AspS9I	GGNCC	7 cut(s)	156, 246, 434, 842, 928, 1374, 1667
AsuC2I	CCSGG	1 cut(s)	104
AsuNHI	GCTAGC	1 cut(s)	424
AvaII	GGWCC	5 cut(s)	246, 434, 842, 1374, 1667
AxyI	CCTNAGG	1 cut(s)	318
BaeGI	GKGCMC	3 cut(s)	869, 1234, 1887
BaeI	ACNNNNGTAYC	2 cut(s)	1497, 1530
BamHI	GGATCC	1 cut(s)	47
BanI	GGYRCC	2 cut(s)	1505, 1708
Bbv12I	GWGCWC	2 cut(s)	1279, 1887
BbvI	GCAGC	4 cut(s)	109, 848, 1058, 1270
BccI	CCATC	7 cut(s)	573, 901, 943, 953, 1385, 1699, 1936
BceAI	ACGGC	1 cut(s)	1647
BciT130I	CCWGG	3 cut(s)	272, 1313, 1503
BclI	TGATCA	1 cut(s)	1695
BcnI	CCSGG	1 cut(s)	104
BcoDI	GTCTC	5 cut(s)	466, 909, 1502, 1925, 2097
BfaI	CTAG	5 cut(s)	425, 458, 1155, 1280, 1659
BfmI	CTRYAG	1 cut(s)	852
BfuAI	ACCTGC	1 cut(s)	830
BglII	AGATCT	1 cut(s)	1652
BisI	GCNGC	6 cut(s)	98, 149, 159, 837, 1047, 1284
BlsI	GCNGC	6 cut(s)	99, 150, 160, 838, 1048, 1285
Bme1390I	CCNGG	4 cut(s)	104, 272, 1313, 1503
Bme18I	GGWCC	5 cut(s)	246, 434, 842, 1374, 1667
BmgBI	CACGTC	1 cut(s)	198
BmgT120I	GGNCC	7 cut(s)	156, 246, 434, 842, 928, 1374, 1667
BmiI	GGNNCC	7 cut(s)	49, 844, 1147, 1507, 1710, 2039, 2082
BmrFI	CCNGG	4 cut(s)	104, 272, 1313, 1503
BmrI	ACTGGG	1 cut(s)	1264
BmsI	GCATC	7 cut(s)	26, 487, 489, 727, 1570, 1768, 1879
BmtI	GCTAGC	1 cut(s)	428
BmuI	ACTGGG	1 cut(s)	1264
BpmI	CTGGAG	4 cut(s)	233, 254, 750, 2048
BpuEI	CTTGAG	1 cut(s)	639
BpuMI	CCSGG	1 cut(s)	104
BsaAI	YACGTR	1 cut(s)	1628
BsaBI	GATNNNNATC	1 cut(s)	1074
BsaHI	GRCGYC	4 cut(s)	113, 303, 1419, 1495
BsaJI	CCNNGG	5 cut(s)	906, 1402, 1501, 1663, 2058
BsaWI	WCCGGW	2 cut(s)	81, 234
BsaXI	ACNNNNNCTCC	2 cut(s)	1757, 1787
Bsc4I	CCNNNNNNNGG	6 cut(s)	255, 362, 1142, 1155, 1429, 2077
Bse1I	ACTGG	4 cut(s)	437, 1006, 1195, 1270
Bse21I	CCTNAGG	1 cut(s)	318
Bse3DI	GCAATG	2 cut(s)	330, 1029
Bse8I	GATNNNNATC	1 cut(s)	1074
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	3 cut(s)	272, 1313, 1503
BseDI	CCNNGG	5 cut(s)	906, 1402, 1501, 1663, 2058
BseGI	GGATG	3 cut(s)	17, 584, 945
BseJI	GATNNNNATC	1 cut(s)	1074
BseLI	CCNNNNNNNGG	6 cut(s)	255, 362, 1142, 1155, 1429, 2077
BseMI	GCAATG	2 cut(s)	330, 1029
BseMII	CTCAG	5 cut(s)	332, 501, 618, 821, 2087
BseNI	ACTGG	4 cut(s)	437, 1006, 1195, 1270
BseRI	GAGGAG	3 cut(s)	43, 124, 1340
BseSI	GKGCMC	3 cut(s)	869, 1234, 1887
BseXI	GCAGC	4 cut(s)	109, 848, 1058, 1270
BseYI	CCCAGC	1 cut(s)	344
Bsh1236I	CGCG	3 cut(s)	41, 161, 261
BshFI	GGCC	5 cut(s)	158, 287, 930, 1311, 1946
BshNI	GGYRCC	2 cut(s)	1505, 1708
BsiHKAI	GWGCWC	2 cut(s)	1279, 1887
BsiSI	CCGG	4 cut(s)	82, 104, 235, 288
BslFI	GGGAC	1 cut(s)	828
BslI	CCNNNNNNNGG	6 cut(s)	255, 362, 1142, 1155, 1429, 2077
BsmAI	GTCTC	5 cut(s)	466, 909, 1502, 1925, 2097
BsmBI	CGTCTC	1 cut(s)	1502
BsmFI	GGGAC	1 cut(s)	828
BsmI	GAATGC	1 cut(s)	557
BsnI	GGCC	5 cut(s)	158, 287, 930, 1311, 1946
Bsp1286I	GDGCHC	4 cut(s)	869, 1234, 1279, 1887
Bsp13I	TCCGGA	1 cut(s)	81
Bsp143I	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
BspACI	CCGC	5 cut(s)	41, 45, 149, 159, 1777
BspANI	GGCC	5 cut(s)	158, 287, 930, 1311, 1946
BspCNI	CTCAG	5 cut(s)	331, 502, 617, 822, 2086
BspEI	TCCGGA	1 cut(s)	81
BspFNI	CGCG	3 cut(s)	41, 161, 261
BspLI	GGNNCC	7 cut(s)	49, 844, 1147, 1507, 1710, 2039, 2082
BspMAI	CTGCAG	1 cut(s)	856
BspMI	ACCTGC	1 cut(s)	830
BspOI	GCTAGC	1 cut(s)	428
BspPI	GGATC	3 cut(s)	42, 55, 551
BspT107I	GGYRCC	2 cut(s)	1505, 1708
BsrDI	GCAATG	2 cut(s)	330, 1029
BsrI	ACTGG	4 cut(s)	437, 1006, 1195, 1270
BssECI	CCNNGG	5 cut(s)	906, 1402, 1501, 1663, 2058
BssMI	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
BssNI	GRCGYC	4 cut(s)	113, 303, 1419, 1495
BssT1I	CCWWGG	3 cut(s)	906, 1402, 2058
Bst2UI	CCWGG	3 cut(s)	272, 1313, 1503
Bst4CI	ACNGT	3 cut(s)	298, 1254, 1513
Bst6I	CTCTTC	1 cut(s)	1956
BstACI	GRCGYC	4 cut(s)	113, 303, 1419, 1495
BstBAI	YACGTR	1 cut(s)	1628
BstC8I	GCNNGC	3 cut(s)	43, 426, 516
BstDEI	CTNAG	8 cut(s)	318, 510, 604, 770, 830, 1938, 1991, 2073
BstDSI	CCRYGG	1 cut(s)	1663
BstENI	CCTNNNNNAGG	2 cut(s)	1140, 1153
BstF5I	GGATG	3 cut(s)	17, 584, 945
BstFNI	CGCG	3 cut(s)	41, 161, 261
BstHHI	GCGC	4 cut(s)	163, 261, 742, 991
BstKTI	GATC	6 cut(s)	50, 280, 546, 1655, 1698, 1838
BstMAI	GTCTC	5 cut(s)	466, 909, 1502, 1925, 2097
BstMBI	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
BstMWI	GCNNNNNNNGC	6 cut(s)	223, 341, 571, 597, 1046, 1283
BstNI	CCWGG	3 cut(s)	272, 1313, 1503
BstNSI	RCATGY	1 cut(s)	1916
BstSCI	CCNGG	4 cut(s)	102, 270, 1311, 1501
BstSFI	CTRYAG	1 cut(s)	852
BstSLI	GKGCMC	3 cut(s)	869, 1234, 1887
BstUI	CGCG	3 cut(s)	41, 161, 261
BstV1I	GCAGC	4 cut(s)	109, 848, 1058, 1270
BstX2I	RGATCY	2 cut(s)	47, 1652
BstXI	CCANNNNNNTGG	1 cut(s)	907
BstYI	RGATCY	2 cut(s)	47, 1652
Bsu36I	CCTNAGG	1 cut(s)	318
BsuRI	GGCC	5 cut(s)	158, 287, 930, 1311, 1946
BtgI	CCRYGG	1 cut(s)	1663
BtrI	CACGTC	1 cut(s)	198
BtsCI	GGATG	3 cut(s)	17, 584, 945
BtsI	GCAGTG	1 cut(s)	849
BtsIMutI	CAGTG	6 cut(s)	507, 707, 849, 1250, 1277, 1509
BveI	ACCTGC	1 cut(s)	830
Cac8I	GCNNGC	3 cut(s)	43, 426, 516
CfoI	GCGC	4 cut(s)	163, 261, 742, 991
Cfr13I	GGNCC	7 cut(s)	156, 246, 434, 842, 928, 1374, 1667
CseI	GACGC	4 cut(s)	132, 292, 1408, 1484
Csp6I	GTAC	4 cut(s)	383, 1389, 1506, 1768
CviAII	CATG	7 cut(s)	58, 193, 283, 307, 535, 547, 1913
CviQI	GTAC	4 cut(s)	383, 1389, 1506, 1768
DdeI	CTNAG	8 cut(s)	318, 510, 604, 770, 830, 1938, 1991, 2073
DpnI	GATC	6 cut(s)	49, 279, 545, 1654, 1697, 1837
DpnII	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
DrdI	GACNNNNNNGTC	1 cut(s)	118
DseDI	GACNNNNNNGTC	1 cut(s)	118
EaeI	YGGCCR	2 cut(s)	285, 1944
Eam1104I	CTCTTC	1 cut(s)	1956
EarI	CTCTTC	1 cut(s)	1956
EciI	GGCGGA	1 cut(s)	60
Eco130I	CCWWGG	3 cut(s)	906, 1402, 2058
Eco147I	AGGCCT	1 cut(s)	1311
Eco32I	GATATC	1 cut(s)	1783
Eco47I	GGWCC	5 cut(s)	246, 434, 842, 1374, 1667
Eco57I	CTGAAG	3 cut(s)	615, 1892, 1980
Eco81I	CCTNAGG	1 cut(s)	318
EcoNI	CCTNNNNNAGG	2 cut(s)	1140, 1153
EcoO109I	RGGNCCY	2 cut(s)	842, 928
EcoRII	CCWGG	3 cut(s)	270, 1311, 1501
EcoRV	GATATC	1 cut(s)	1783
EcoT14I	CCWWGG	3 cut(s)	906, 1402, 2058
EcoT22I	ATGCAT	1 cut(s)	557
ErhI	CCWWGG	3 cut(s)	906, 1402, 2058
Esp3I	CGTCTC	1 cut(s)	1502
FaeI	CATG	7 cut(s)	61, 196, 286, 310, 538, 550, 1916
FalI	AAGNNNNNCTT	4 cut(s)	1350, 1382, 1890, 1922
FaqI	GGGAC	1 cut(s)	828
FatI	CATG	7 cut(s)	57, 192, 282, 306, 534, 546, 1912
FauI	CCCGC	2 cut(s)	34, 1770
FbaI	TGATCA	1 cut(s)	1695
Fnu4HI	GCNGC	6 cut(s)	98, 149, 159, 837, 1047, 1284
FokI	GGATG	3 cut(s)	4, 591, 932
Fsp4HI	GCNGC	6 cut(s)	98, 149, 159, 837, 1047, 1284
FspBI	CTAG	5 cut(s)	425, 458, 1155, 1280, 1659
GlaI	GCGC	4 cut(s)	162, 260, 741, 990
GluI	GCNGC	6 cut(s)	98, 149, 159, 837, 1047, 1284
GsaI	CCCAGC	1 cut(s)	348
GsuI	CTGGAG	4 cut(s)	233, 254, 750, 2048
HaeIII	GGCC	5 cut(s)	158, 287, 930, 1311, 1946
HapII	CCGG	4 cut(s)	82, 104, 235, 288
HgaI	GACGC	4 cut(s)	132, 292, 1408, 1484
HhaI	GCGC	4 cut(s)	163, 261, 742, 991
Hin1I	GRCGYC	4 cut(s)	113, 303, 1419, 1495
Hin1II	CATG	7 cut(s)	61, 196, 286, 310, 538, 550, 1916
Hin6I	GCGC	4 cut(s)	161, 259, 740, 989
HinP1I	GCGC	4 cut(s)	161, 259, 740, 989
HindIII	AAGCTT	2 cut(s)	954, 1743
HpaII	CCGG	4 cut(s)	82, 104, 235, 288
Hpy166II	GTNNAC	2 cut(s)	1667, 1885
Hpy188I	TCNGA	9 cut(s)	34, 246, 496, 984, 1575, 1821, 1920, 1956, 2023
Hpy8I	GTNNAC	2 cut(s)	1667, 1885
Hpy99I	CGWCG	7 cut(s)	67, 70, 115, 118, 130, 148, 302
HpyAV	CCTTC	4 cut(s)	175, 941, 1916, 1987
HpyCH4III	ACNGT	3 cut(s)	298, 1254, 1513
HpyCH4IV	ACGT	3 cut(s)	113, 197, 1627
HpyF10VI	GCNNNNNNNGC	6 cut(s)	223, 341, 571, 597, 1046, 1283
HpyF3I	CTNAG	8 cut(s)	318, 510, 604, 770, 830, 1938, 1991, 2073
HpySE526I	ACGT	3 cut(s)	113, 197, 1627
Hsp92I	GRCGYC	4 cut(s)	113, 303, 1419, 1495
Hsp92II	CATG	7 cut(s)	61, 196, 286, 310, 538, 550, 1916
HspAI	GCGC	4 cut(s)	161, 259, 740, 989
Kpn2I	TCCGGA	1 cut(s)	81
KpnI	GGTACC	1 cut(s)	1509
Ksp22I	TGATCA	1 cut(s)	1695
Kzo9I	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
LmnI	GCTCC	3 cut(s)	214, 1181, 2080
Lsp1109I	GCAGC	4 cut(s)	109, 848, 1058, 1270
LweI	GCATC	7 cut(s)	26, 487, 489, 727, 1570, 1768, 1879
MaeI	CTAG	5 cut(s)	425, 458, 1155, 1280, 1659
MaeII	ACGT	3 cut(s)	113, 197, 1627
MaeIII	GTNAC	4 cut(s)	749, 1607, 1714, 2053
MalI	GATC	6 cut(s)	49, 279, 545, 1654, 1697, 1837
MboI	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
MboII	GAAGA	6 cut(s)	483, 888, 1358, 1864, 1973, 2094
MflI	RGATCY	2 cut(s)	47, 1652
MhlI	GDGCHC	4 cut(s)	869, 1234, 1279, 1887
MluCI	AATT	4 cut(s)	338, 1203, 1560, 1683
MlyI	GAGTC	1 cut(s)	2039
MmeI	TCCRAC	3 cut(s)	1007, 1047, 2058
Mph1103I	ATGCAT	1 cut(s)	557
MroI	TCCGGA	1 cut(s)	81
MroXI	GAANNNNTTC	1 cut(s)	2101
MseI	TTAA	6 cut(s)	473, 569, 714, 888, 1748, 1925
MslI	CAYNNNNRTG	1 cut(s)	1703
MspA1I	CMGCKG	2 cut(s)	151, 1163
MspI	CCGG	4 cut(s)	82, 104, 235, 288
MspR9I	CCNGG	4 cut(s)	104, 272, 1313, 1503
Mva1269I	GAATGC	1 cut(s)	557
MvaI	CCWGG	3 cut(s)	272, 1313, 1503
MvnI	CGCG	3 cut(s)	41, 161, 261
MwoI	GCNNNNNNNGC	6 cut(s)	223, 341, 571, 597, 1046, 1283
NciI	CCSGG	1 cut(s)	104
NdeII	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
NheI	GCTAGC	1 cut(s)	424
NlaIII	CATG	7 cut(s)	61, 196, 286, 310, 538, 550, 1916
NlaIV	GGNNCC	7 cut(s)	49, 844, 1147, 1507, 1710, 2039, 2082
NsiI	ATGCAT	1 cut(s)	557
NspI	RCATGY	1 cut(s)	1916
PceI	AGGCCT	1 cut(s)	1311
PcsI	WCGNNNNNNNCGW	1 cut(s)	122
PctI	GAATGC	1 cut(s)	557
PdmI	GAANNNNTTC	1 cut(s)	2101
PfeI	GAWTC	9 cut(s)	241, 488, 979, 1019, 1070, 1259, 1463, 1727, 2009
PkrI	GCNGC	6 cut(s)	99, 150, 160, 838, 1048, 1285
PleI	GAGTC	1 cut(s)	2038
PpsI	GAGTC	1 cut(s)	2038
Ppu21I	YACGTR	1 cut(s)	1628
PpuMI	RGGWCCY	1 cut(s)	842
PsiI	TTATAA	1 cut(s)	1220
Psp5II	RGGWCCY	1 cut(s)	842
Psp6I	CCWGG	3 cut(s)	270, 1311, 1501
PspFI	CCCAGC	1 cut(s)	344
PspGI	CCWGG	3 cut(s)	270, 1311, 1501
PspN4I	GGNNCC	7 cut(s)	49, 844, 1147, 1507, 1710, 2039, 2082
PspPI	GGNCC	7 cut(s)	156, 246, 434, 842, 928, 1374, 1667
PspPPI	RGGWCCY	1 cut(s)	842
PstI	CTGCAG	1 cut(s)	856
PsuI	RGATCY	2 cut(s)	47, 1652
PvuII	CAGCTG	1 cut(s)	1163
RsaI	GTAC	4 cut(s)	384, 1390, 1507, 1769
RsaNI	GTAC	4 cut(s)	383, 1389, 1506, 1768
RseI	CAYNNNNRTG	1 cut(s)	1703
SaqAI	TTAA	6 cut(s)	473, 569, 714, 888, 1748, 1925
SatI	GCNGC	6 cut(s)	98, 149, 159, 837, 1047, 1284
Sau3AI	GATC	6 cut(s)	47, 277, 543, 1652, 1695, 1835
Sau96I	GGNCC	7 cut(s)	156, 246, 434, 842, 928, 1374, 1667
SchI	GAGTC	1 cut(s)	2039
ScrFI	CCNGG	4 cut(s)	104, 272, 1313, 1503
SduI	GDGCHC	4 cut(s)	869, 1234, 1279, 1887
SfaNI	GCATC	7 cut(s)	26, 487, 489, 727, 1570, 1768, 1879
SfcI	CTRYAG	1 cut(s)	852
SinI	GGWCC	5 cut(s)	246, 434, 842, 1374, 1667
SmiMI	CAYNNNNRTG	1 cut(s)	1703
SmlI	CTYRAG	1 cut(s)	654
SmoI	CTYRAG	1 cut(s)	654
Sse9I	AATT	4 cut(s)	338, 1203, 1560, 1683
SseBI	AGGCCT	1 cut(s)	1311
SsiI	CCGC	5 cut(s)	41, 45, 149, 159, 1777
SspI	AATATT	3 cut(s)	522, 885, 1108
SspMI	CTAG	5 cut(s)	425, 458, 1155, 1280, 1659
StuI	AGGCCT	1 cut(s)	1311
StyD4I	CCNGG	4 cut(s)	102, 270, 1311, 1501
StyI	CCWWGG	3 cut(s)	906, 1402, 2058
TaaI	ACNGT	3 cut(s)	298, 1254, 1513
TaiI	ACGT	3 cut(s)	116, 200, 1630
TaqI	TCGA	5 cut(s)	167, 179, 276, 1810, 2095
TasI	AATT	4 cut(s)	338, 1203, 1560, 1683
TatI	WGTACW	2 cut(s)	1388, 1767
TauI	GCSGC	2 cut(s)	151, 161
TfiI	GAWTC	9 cut(s)	241, 488, 979, 1019, 1070, 1259, 1463, 1727, 2009
Tru1I	TTAA	6 cut(s)	473, 569, 714, 888, 1748, 1925
Tru9I	TTAA	6 cut(s)	473, 569, 714, 888, 1748, 1925
TscAI	CASTG	6 cut(s)	514, 714, 856, 1257, 1277, 1516
TseI	GCWGC	4 cut(s)	97, 836, 1046, 1283
TspDTI	ATGAA	6 cut(s)	583, 1107, 1188, 1476, 1650, 2001
TspGWI	ACGGA	1 cut(s)	378
TspRI	CASTG	6 cut(s)	514, 714, 856, 1257, 1277, 1516
VneI	GTGCAC	1 cut(s)	1883
VpaK11BI	GGWCC	5 cut(s)	246, 434, 842, 1374, 1667
XagI	CCTNNNNNAGG	2 cut(s)	1140, 1153
XapI	RAATTY	1 cut(s)	1683
XceI	RCATGY	1 cut(s)	1916
XmnI	GAANNNNTTC	1 cut(s)	2101
XspI	CTAG	5 cut(s)	425, 458, 1155, 1280, 1659
ZraI	GACGTC	1 cut(s)	114
Zsp2I	ATGCAT	1 cut(s)	557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.