Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0007250

Physical Location & Seq

Genomic Coordinates Reverse (-)

57120588 .. 57128214

Gene Structure 7627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G029410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGAGATAACCTACGCATCCCCAAGCAACTCCGATTTCGCGGGCGGATCCTCCTCCATGCCGACGACGACCCGACCCGTCCGGATTATCCCCTTGCTGCACCCGGAAACGACGTCGGTGTCGTCGTCGTCCTCCTCCTCAAATGCGTCGCCGCTGTGGGCCGCGCTGTCGAGGTGGAAATCGAAGGTCGTCAGCATGACGTGGATTGAGTGGCTGGAGCTGTTTCTGCCTTGCTTCCGGTGGATTCGGACCTACAAATGGCGCGAGTATCTCCAGGTCGATCTCATGGCCGGAATGACCGTCGGCGTCATGCTCGTTCCTCAGGCAATGTCTTATGCAAAATTGGCTGGGCTTGAACCCATATACGGACTTTACTCTGGTTTTGTACCTTTATTTGTGTATGCTATATTTGGCTCATCTCGTCAGCTAGCTGTTGGTCCAGTAGCGTTGGTTTCACTCCTAGTCTCCAATGTTTTAAGTGGCATCGTTGATTCTTCCGATGCGTTATACACTGAGCTGGCAATATTATTGGCACTCATGGTTGGGATCATGGAATGCATTTTGGGGCTTTTAAGGCTTGGATGGATTATTCGCTTCATCAGCCACTCAGTCATTTCTGGTTTTACAACTGCTTCAGCCATTGTGATTGCTTTATCTCAAGCAAAATACTTCTTGGGATATGATGTAGAACGAAGTAGCGAGATTGTGCCACTGATTAAGAGCATTATATCTGGAGTTGATGCTTTTTCATGGCCCCCTTTCGTAATGGGATCTGTCATTCTTGCGATACTATTGACCATGAAACACTTGGGAAAGACAAGGAAACACTTGCGTTTCCTGAGAGCAGCAGGTCCCCTCACTGCAGTCCTTTTGGGCACTATTTTTGTAAAAATATTTAATCCATCTTCCATATCCTTGGTAGGAGACATACCGCAGGGCCTTCCATCATTTTCCATCCCTAAAGCTTTTGGATATGCTACATCTTTGATTCCGACTGCGCTTCTCATTACCGGTGTAGCTATTTTGGAATCTGTGGGCATTGCAAAAGCATTAGCAGCAAAGAATGGCTATGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGGGTGGCAAATATTTTTGGTTCATTTTTTTCTGCATACCCTACAACAGGTTCCTTTTCTAGGTCAGCTGTGAATAATGAAAGTGGAGCAAAAACTGGCTTATCTGGAATTGTTATGGGATTTATAATGGGGTGTGCCCTCCTATTTATGACTACACTGTTTGAATCCATACCCCAGTGTGCTCTAGCTGCCATTGTCATTTCTGCTGTAATAGGCCTGGTGGATTATGAGGAGGCTATATTTTTATGGCGAGTTGATAAGAAAGATTTTCTTCTTTGGACCATCACAAGCAGTACAACTTTGTTCCTTGGCATTGAGATTGGCGTCCTTGTCGGGGTTGGTGTTTCACTTGCATTTGTTATATATGAATCAGCAAATCCCCATATTGCTGTCTTGGGGCGTCTCCCAGGTACCACTGTTTACAGAAATACACAACAATATCCAGAAGCATATACATACAATGGAATTGTGATTGTTCGGATTGATGCACCTATTTACTTTGCTAACATTAGTTACATAAAAGACAGGCTACGTGAATATGAAGTGGAGGTTGATAGATCTACTAGCCGTGGACCAGAAGTTGAAAGAATTTATTTTGTGATCATAGAGATGGCACCTGTAACATATATAGATTCAAGTGGTGTCCAAGCTTTAAGAGAGTTGCATCAGGAGTACAAGTTGCGGGACATCCAGATTGCCATTTCAAATCTCAATCGAGAAACTCTGATGACCTTATCAAGATCAGGCGTAGTAGAGCTGATTGGTAAGGAGTGGTTCTTCGTAAGAGTGCACGATGCTGTTCAAGTTTGCCTTCAGCATGTTCAGAGCTTAAAAGAGACACCTAAGATGGCCGACCCTCTGACTGAAGAGAGGCAGAGTTCCTTCCAGAGATTTCTTAGACAAAGAGCAGAGGATTCATCACTATCCGAGCTCGAGTCTGGGAACCAGACATCTTTAGTTACCAAGGAAAGCGACCCTCAGTTGGAGCCTTATTGTCTCGAAAATCTTCTTGATTTTCTTGATATGTTCATTACTTGGTATCGAATTCCGCCTACTTTTTTTCTGGGCAGGTTCGTATTTGTCATTAAATATATCCCAGTTTTTTTAGGTTCAGGGTTGATTCTTTCCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

745

Amino Acids

82.17

Weight (kDa)

6.02

Isoelectric Point (pI)

39.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfate_transp	PF00916	91 - 464	7.5e-128	Sulfate permease family
STAS	PF01740	515 - 634	3.8e-24	STAS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007250)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12520 AT3G12520 AT3G12520 AT5G13550
fragaria_vesca	FvH4_7g21210 FvH4_7g21210 FvH4_7g21210
malus_domestica	MD07G1189900.v1.1
prunus_persica	Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1
pyrus_communis	pycom01g14690 pycom07g17950
rosa_chinensis	RchiOBHm_Chr1g0365661
rosa_laevigata	RLG00000027419
rosa_multiflora	Rmu_sc0002093.1_g000005
rosa_roxburghii	Rroxscaffold_4G00291110
rosa_rugosa	Rorug01G0322400 Rorug01G0322400
rosa_samantha	Rh1AG331100 Rh1BG292500 Rh1CG309100 Rh1DG324100
rosa_wichuraiana	Rw1G029410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1229
AasI	GACNNNNNNGTC	1 cut(s)	118
AatII	GACGTC	1 cut(s)	116
Acc36I	ACCTGC	2 cut(s)	839, 2163
Acc65I	GGTACC	1 cut(s)	1514
AccB1I	GGYRCC	2 cut(s)	1514, 1717
AccII	CGCG	3 cut(s)	41, 164, 264
AccIII	TCCGGA	1 cut(s)	81
AciI	CCGC	7 cut(s)	41, 45, 152, 162, 932, 1786, 2153
AclWI	GGATC	4 cut(s)	42, 55, 554, 778
AcoI	YGGCCR	2 cut(s)	288, 1953
AcsI	RAATTY	2 cut(s)	1692, 2148
AcuI	CTGAAG	3 cut(s)	618, 1901, 1989
AcyI	GRCGYC	4 cut(s)	113, 306, 1428, 1504
AfaI	GTAC	4 cut(s)	387, 1399, 1516, 1778
AfiI	CCNNNNNNNGG	6 cut(s)	258, 365, 1151, 1164, 1438, 2086
AgeI	ACCGGT	1 cut(s)	1010
AgsI	TTSAA	7 cut(s)	356, 1083, 1268, 1688, 1740, 1809, 1907
AjiI	CACGTC	1 cut(s)	201
AjnI	CCWGG	3 cut(s)	273, 1320, 1510
Alw21I	GWGCWC	3 cut(s)	1288, 1896, 2037
Alw26I	GTCTC	5 cut(s)	469, 918, 1511, 1934, 2105
Alw44I	GTGCAC	1 cut(s)	1892
AlwI	GGATC	4 cut(s)	42, 55, 554, 778
Ama87I	CYCGRG	1 cut(s)	2036
Aor13HI	TCCGGA	1 cut(s)	81
AoxI	GGCC	6 cut(s)	159, 288, 752, 937, 1318, 1953
ApaLI	GTGCAC	1 cut(s)	1892
ApeKI	GCWGC	4 cut(s)	97, 845, 1055, 1292
ApoI	RAATTY	2 cut(s)	1692, 2148
AsiGI	ACCGGT	1 cut(s)	1010
Asp700I	GAANNNNTTC	1 cut(s)	2109
Asp718I	GGTACC	1 cut(s)	1514
AspLEI	GCGC	3 cut(s)	166, 264, 1000
AspS9I	GGNCC	8 cut(s)	159, 249, 437, 753, 851, 937, 1383, 1676
AsuC2I	CCSGG	1 cut(s)	104
AsuNHI	GCTAGC	1 cut(s)	427
AvaI	CYCGRG	1 cut(s)	2036
AvaII	GGWCC	5 cut(s)	249, 437, 851, 1383, 1676
AxyI	CCTNAGG	1 cut(s)	321
BaeGI	GKGCMC	3 cut(s)	878, 1243, 1896
BaeI	ACNNNNGTAYC	2 cut(s)	1506, 1539
BamHI	GGATCC	1 cut(s)	47
BanI	GGYRCC	2 cut(s)	1514, 1717
BanII	GRGCYC	1 cut(s)	2037
Bbv12I	GWGCWC	3 cut(s)	1288, 1896, 2037
BbvI	GCAGC	4 cut(s)	84, 857, 1067, 1279
BccI	CCATC	7 cut(s)	576, 910, 952, 962, 1394, 1708, 1945
BceAI	ACGGC	1 cut(s)	1656
BciT130I	CCWGG	3 cut(s)	275, 1322, 1512
BclI	TGATCA	1 cut(s)	1704
BcnI	CCSGG	1 cut(s)	104
BcoDI	GTCTC	5 cut(s)	469, 918, 1511, 1934, 2105
BfaI	CTAG	5 cut(s)	428, 461, 1164, 1289, 1668
BfmI	CTRYAG	1 cut(s)	861
BfuAI	ACCTGC	2 cut(s)	839, 2163
BglII	AGATCT	1 cut(s)	1661
BisI	GCNGC	6 cut(s)	98, 152, 162, 846, 1056, 1293
BlsI	GCNGC	6 cut(s)	99, 153, 163, 847, 1057, 1294
Bme1390I	CCNGG	4 cut(s)	104, 275, 1322, 1512
Bme18I	GGWCC	5 cut(s)	249, 437, 851, 1383, 1676
BmeT110I	CYCGRG	1 cut(s)	2036
BmgBI	CACGTC	1 cut(s)	201
BmgT120I	GGNCC	8 cut(s)	159, 249, 437, 753, 851, 937, 1383, 1676
BmiI	GGNNCC	8 cut(s)	49, 755, 853, 1156, 1516, 1719, 2048, 2091
BmrFI	CCNGG	4 cut(s)	104, 275, 1322, 1512
BmrI	ACTGGG	2 cut(s)	1273, 2195
BmsI	GCATC	7 cut(s)	26, 490, 492, 730, 1579, 1777, 1888
BmtI	GCTAGC	1 cut(s)	431
BmuI	ACTGGG	2 cut(s)	1273, 2195
BpmI	CTGGAG	3 cut(s)	236, 257, 753
BpuEI	CTTGAG	1 cut(s)	642
BpuMI	CCSGG	1 cut(s)	104
BsaAI	YACGTR	1 cut(s)	1637
BsaBI	GATNNNNATC	1 cut(s)	1083
BsaHI	GRCGYC	4 cut(s)	113, 306, 1428, 1504
BsaJI	CCNNGG	5 cut(s)	915, 1411, 1510, 1672, 2067
BsaWI	WCCGGW	3 cut(s)	81, 237, 1010
BsaXI	ACNNNNNCTCC	2 cut(s)	1766, 1796
Bsc4I	CCNNNNNNNGG	6 cut(s)	258, 365, 1151, 1164, 1438, 2086
Bse118I	RCCGGY	1 cut(s)	1010
Bse1I	ACTGG	4 cut(s)	440, 1204, 1279, 2201
Bse21I	CCTNAGG	1 cut(s)	321
Bse3DI	GCAATG	2 cut(s)	333, 1038
Bse8I	GATNNNNATC	1 cut(s)	1083
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	3 cut(s)	275, 1322, 1512
BseDI	CCNNGG	5 cut(s)	915, 1411, 1510, 1672, 2067
BseGI	GGATG	4 cut(s)	17, 587, 954, 1791
BseJI	GATNNNNATC	1 cut(s)	1083
BseLI	CCNNNNNNNGG	6 cut(s)	258, 365, 1151, 1164, 1438, 2086
BseMI	GCAATG	2 cut(s)	333, 1038
BseMII	CTCAG	5 cut(s)	335, 504, 621, 830, 2096
BseNI	ACTGG	4 cut(s)	440, 1204, 1279, 2201
BseRI	GAGGAG	4 cut(s)	43, 124, 127, 1349
BseSI	GKGCMC	3 cut(s)	878, 1243, 1896
BseXI	GCAGC	4 cut(s)	84, 857, 1067, 1279
BseYI	CCCAGC	1 cut(s)	347
BsgI	GTGCAG	1 cut(s)	83
Bsh1236I	CGCG	3 cut(s)	41, 164, 264
BshFI	GGCC	6 cut(s)	161, 290, 754, 939, 1320, 1955
BshNI	GGYRCC	2 cut(s)	1514, 1717
BshTI	ACCGGT	1 cut(s)	1010
BsiHKAI	GWGCWC	3 cut(s)	1288, 1896, 2037
BsiHKCI	CYCGRG	1 cut(s)	2036
BsiSI	CCGG	5 cut(s)	82, 104, 238, 291, 1011
BslFI	GGGAC	2 cut(s)	837, 1802
BslI	CCNNNNNNNGG	6 cut(s)	258, 365, 1151, 1164, 1438, 2086
BsmAI	GTCTC	5 cut(s)	469, 918, 1511, 1934, 2105
BsmBI	CGTCTC	1 cut(s)	1511
BsmFI	GGGAC	2 cut(s)	837, 1802
BsmI	GAATGC	1 cut(s)	560
BsnI	GGCC	6 cut(s)	161, 290, 754, 939, 1320, 1955
BsoBI	CYCGRG	1 cut(s)	2036
Bsp1286I	GDGCHC	5 cut(s)	878, 1243, 1288, 1896, 2037
Bsp13I	TCCGGA	1 cut(s)	81
Bsp143I	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
BspACI	CCGC	7 cut(s)	41, 45, 152, 162, 932, 1786, 2153
BspANI	GGCC	6 cut(s)	161, 290, 754, 939, 1320, 1955
BspCNI	CTCAG	5 cut(s)	334, 505, 620, 831, 2095
BspEI	TCCGGA	1 cut(s)	81
BspFNI	CGCG	3 cut(s)	41, 164, 264
BspLI	GGNNCC	8 cut(s)	49, 755, 853, 1156, 1516, 1719, 2048, 2091
BspMAI	CTGCAG	1 cut(s)	865
BspMI	ACCTGC	2 cut(s)	839, 2163
BspOI	GCTAGC	1 cut(s)	431
BspPI	GGATC	4 cut(s)	42, 55, 554, 778
BspT107I	GGYRCC	2 cut(s)	1514, 1717
BsrDI	GCAATG	2 cut(s)	333, 1038
BsrFI	RCCGGY	1 cut(s)	1010
BsrI	ACTGG	4 cut(s)	440, 1204, 1279, 2201
BssAI	RCCGGY	1 cut(s)	1010
BssECI	CCNNGG	5 cut(s)	915, 1411, 1510, 1672, 2067
BssMI	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
BssNI	GRCGYC	4 cut(s)	113, 306, 1428, 1504
BssT1I	CCWWGG	3 cut(s)	915, 1411, 2067
Bst2UI	CCWGG	3 cut(s)	275, 1322, 1512
Bst4CI	ACNGT	3 cut(s)	301, 1263, 1522
Bst6I	CTCTTC	1 cut(s)	1965
BstACI	GRCGYC	4 cut(s)	113, 306, 1428, 1504
BstBAI	YACGTR	1 cut(s)	1637
BstC8I	GCNNGC	3 cut(s)	43, 429, 519
BstDEI	CTNAG	7 cut(s)	321, 513, 607, 839, 1947, 2000, 2082
BstDSI	CCRYGG	1 cut(s)	1672
BstENI	CCTNNNNNAGG	2 cut(s)	1149, 1162
BstF5I	GGATG	4 cut(s)	17, 587, 954, 1791
BstFNI	CGCG	3 cut(s)	41, 164, 264
BstHHI	GCGC	3 cut(s)	166, 264, 1000
BstKTI	GATC	7 cut(s)	50, 283, 549, 773, 1664, 1707, 1847
BstMAI	GTCTC	5 cut(s)	469, 918, 1511, 1934, 2105
BstMBI	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
BstMWI	GCNNNNNNNGC	6 cut(s)	226, 344, 574, 600, 1055, 1292
BstNI	CCWGG	3 cut(s)	275, 1322, 1512
BstNSI	RCATGY	1 cut(s)	1925
BstSCI	CCNGG	4 cut(s)	102, 273, 1320, 1510
BstSFI	CTRYAG	1 cut(s)	861
BstSLI	GKGCMC	3 cut(s)	878, 1243, 1896
BstUI	CGCG	3 cut(s)	41, 164, 264
BstV1I	GCAGC	4 cut(s)	84, 857, 1067, 1279
BstX2I	RGATCY	3 cut(s)	47, 770, 1661
BstXI	CCANNNNNNTGG	1 cut(s)	916
BstYI	RGATCY	3 cut(s)	47, 770, 1661
Bsu36I	CCTNAGG	1 cut(s)	321
BsuRI	GGCC	6 cut(s)	161, 290, 754, 939, 1320, 1955
BtgI	CCRYGG	1 cut(s)	1672
BtrI	CACGTC	1 cut(s)	201
BtsCI	GGATG	4 cut(s)	17, 587, 954, 1791
BtsI	GCAGTG	1 cut(s)	858
BtsIMutI	CAGTG	6 cut(s)	510, 710, 858, 1259, 1286, 1518
BveI	ACCTGC	2 cut(s)	839, 2163
Cac8I	GCNNGC	3 cut(s)	43, 429, 519
CfoI	GCGC	3 cut(s)	166, 264, 1000
Cfr10I	RCCGGY	1 cut(s)	1010
Cfr13I	GGNCC	8 cut(s)	159, 249, 437, 753, 851, 937, 1383, 1676
CseI	GACGC	4 cut(s)	135, 295, 1417, 1493
Csp6I	GTAC	4 cut(s)	386, 1398, 1515, 1777
CspAI	ACCGGT	1 cut(s)	1010
CviQI	GTAC	4 cut(s)	386, 1398, 1515, 1777
DdeI	CTNAG	7 cut(s)	321, 513, 607, 839, 1947, 2000, 2082
DpnI	GATC	7 cut(s)	49, 282, 548, 772, 1663, 1706, 1846
DpnII	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
DrdI	GACNNNNNNGTC	1 cut(s)	118
DseDI	GACNNNNNNGTC	1 cut(s)	118
EaeI	YGGCCR	2 cut(s)	288, 1953
Eam1104I	CTCTTC	1 cut(s)	1965
EarI	CTCTTC	1 cut(s)	1965
EciI	GGCGGA	2 cut(s)	60, 2142
Ecl136II	GAGCTC	1 cut(s)	2035
Eco130I	CCWWGG	3 cut(s)	915, 1411, 2067
Eco147I	AGGCCT	1 cut(s)	1320
Eco24I	GRGCYC	1 cut(s)	2037
Eco47I	GGWCC	5 cut(s)	249, 437, 851, 1383, 1676
Eco53kI	GAGCTC	1 cut(s)	2035
Eco57I	CTGAAG	3 cut(s)	618, 1901, 1989
Eco81I	CCTNAGG	1 cut(s)	321
Eco88I	CYCGRG	1 cut(s)	2036
EcoICRI	GAGCTC	1 cut(s)	2035
EcoNI	CCTNNNNNAGG	2 cut(s)	1149, 1162
EcoO109I	RGGNCCY	2 cut(s)	851, 937
EcoRI	GAATTC	1 cut(s)	2148
EcoRII	CCWGG	3 cut(s)	273, 1320, 1510
EcoT14I	CCWWGG	3 cut(s)	915, 1411, 2067
EcoT22I	ATGCAT	1 cut(s)	560
EcoT38I	GRGCYC	1 cut(s)	2037
ErhI	CCWWGG	3 cut(s)	915, 1411, 2067
Esp3I	CGTCTC	1 cut(s)	1511
FalI	AAGNNNNNCTT	4 cut(s)	1359, 1391, 1899, 1931
FaqI	GGGAC	2 cut(s)	837, 1802
FauI	CCCGC	2 cut(s)	34, 1779
FbaI	TGATCA	1 cut(s)	1704
Fnu4HI	GCNGC	6 cut(s)	98, 152, 162, 846, 1056, 1293
FokI	GGATG	4 cut(s)	4, 594, 941, 1778
FriOI	GRGCYC	1 cut(s)	2037
Fsp4HI	GCNGC	6 cut(s)	98, 152, 162, 846, 1056, 1293
FspBI	CTAG	5 cut(s)	428, 461, 1164, 1289, 1668
GlaI	GCGC	3 cut(s)	165, 263, 999
GluI	GCNGC	6 cut(s)	98, 152, 162, 846, 1056, 1293
GsaI	CCCAGC	1 cut(s)	351
GsuI	CTGGAG	3 cut(s)	236, 257, 753
HaeIII	GGCC	6 cut(s)	161, 290, 754, 939, 1320, 1955
HapII	CCGG	5 cut(s)	82, 104, 238, 291, 1011
HgaI	GACGC	4 cut(s)	135, 295, 1417, 1493
HhaI	GCGC	3 cut(s)	166, 264, 1000
Hin1I	GRCGYC	4 cut(s)	113, 306, 1428, 1504
Hin6I	GCGC	3 cut(s)	164, 262, 998
HinP1I	GCGC	3 cut(s)	164, 262, 998
HindIII	AAGCTT	2 cut(s)	963, 1752
HpaII	CCGG	5 cut(s)	82, 104, 238, 291, 1011
Hpy166II	GTNNAC	3 cut(s)	1525, 1676, 1894
Hpy188I	TCNGA	9 cut(s)	34, 249, 499, 993, 1584, 1830, 1929, 1965, 2032
Hpy8I	GTNNAC	3 cut(s)	1525, 1676, 1894
Hpy99I	CGWCG	8 cut(s)	67, 70, 115, 118, 127, 130, 151, 305
HpyAV	CCTTC	4 cut(s)	178, 950, 1925, 1996
HpyCH4III	ACNGT	3 cut(s)	301, 1263, 1522
HpyCH4IV	ACGT	3 cut(s)	113, 200, 1636
HpyF10VI	GCNNNNNNNGC	6 cut(s)	226, 344, 574, 600, 1055, 1292
HpyF3I	CTNAG	7 cut(s)	321, 513, 607, 839, 1947, 2000, 2082
HpySE526I	ACGT	3 cut(s)	113, 200, 1636
Hsp92I	GRCGYC	4 cut(s)	113, 306, 1428, 1504
HspAI	GCGC	3 cut(s)	164, 262, 998
Kpn2I	TCCGGA	1 cut(s)	81
KpnI	GGTACC	1 cut(s)	1518
Ksp22I	TGATCA	1 cut(s)	1704
Kzo9I	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
LmnI	GCTCC	3 cut(s)	217, 1190, 2089
Lsp1109I	GCAGC	4 cut(s)	84, 857, 1067, 1279
LweI	GCATC	7 cut(s)	26, 490, 492, 730, 1579, 1777, 1888
MaeI	CTAG	5 cut(s)	428, 461, 1164, 1289, 1668
MaeII	ACGT	3 cut(s)	113, 200, 1636
MaeIII	GTNAC	3 cut(s)	1616, 1723, 2062
MalI	GATC	7 cut(s)	49, 282, 548, 772, 1663, 1706, 1846
MboI	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
MboII	GAAGA	6 cut(s)	486, 897, 1367, 1873, 1982, 2102
MflI	RGATCY	3 cut(s)	47, 770, 1661
MhlI	GDGCHC	5 cut(s)	878, 1243, 1288, 1896, 2037
MluCI	AATT	5 cut(s)	341, 1212, 1569, 1692, 2148
MlyI	GAGTC	1 cut(s)	2048
MmeI	TCCRAC	3 cut(s)	1016, 1056, 2067
Mph1103I	ATGCAT	1 cut(s)	560
MroI	TCCGGA	1 cut(s)	81
MroXI	GAANNNNTTC	1 cut(s)	2109
MseI	TTAA	7 cut(s)	476, 572, 717, 897, 1757, 1934, 2190
MslI	CAYNNNNRTG	1 cut(s)	1712
MspA1I	CMGCKG	2 cut(s)	154, 1172
MspI	CCGG	5 cut(s)	82, 104, 238, 291, 1011
MspR9I	CCNGG	4 cut(s)	104, 275, 1322, 1512
Mva1269I	GAATGC	1 cut(s)	560
MvaI	CCWGG	3 cut(s)	275, 1322, 1512
MvnI	CGCG	3 cut(s)	41, 164, 264
MwoI	GCNNNNNNNGC	6 cut(s)	226, 344, 574, 600, 1055, 1292
NciI	CCSGG	1 cut(s)	104
NdeII	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
NheI	GCTAGC	1 cut(s)	427
NlaIV	GGNNCC	8 cut(s)	49, 755, 853, 1156, 1516, 1719, 2048, 2091
NsiI	ATGCAT	1 cut(s)	560
NspI	RCATGY	1 cut(s)	1925
PaeR7I	CTCGAG	1 cut(s)	2036
PceI	AGGCCT	1 cut(s)	1320
PcsI	WCGNNNNNNNCGW	2 cut(s)	119, 122
PctI	GAATGC	1 cut(s)	560
PdmI	GAANNNNTTC	1 cut(s)	2109
PinAI	ACCGGT	1 cut(s)	1010
PkrI	GCNGC	6 cut(s)	99, 153, 163, 847, 1057, 1294
PleI	GAGTC	1 cut(s)	2047
PpsI	GAGTC	1 cut(s)	2047
Ppu21I	YACGTR	1 cut(s)	1637
PpuMI	RGGWCCY	1 cut(s)	851
PsiI	TTATAA	1 cut(s)	1229
Psp124BI	GAGCTC	1 cut(s)	2037
Psp5II	RGGWCCY	1 cut(s)	851
Psp6I	CCWGG	3 cut(s)	273, 1320, 1510
PspFI	CCCAGC	1 cut(s)	347
PspGI	CCWGG	3 cut(s)	273, 1320, 1510
PspN4I	GGNNCC	8 cut(s)	49, 755, 853, 1156, 1516, 1719, 2048, 2091
PspPI	GGNCC	8 cut(s)	159, 249, 437, 753, 851, 937, 1383, 1676
PspPPI	RGGWCCY	1 cut(s)	851
PspXI	VCTCGAGB	1 cut(s)	2036
PstI	CTGCAG	1 cut(s)	865
PsuI	RGATCY	3 cut(s)	47, 770, 1661
PvuII	CAGCTG	1 cut(s)	1172
RsaI	GTAC	4 cut(s)	387, 1399, 1516, 1778
RsaNI	GTAC	4 cut(s)	386, 1398, 1515, 1777
RseI	CAYNNNNRTG	1 cut(s)	1712
SacI	GAGCTC	1 cut(s)	2037
SaqAI	TTAA	7 cut(s)	476, 572, 717, 897, 1757, 1934, 2190
SatI	GCNGC	6 cut(s)	98, 152, 162, 846, 1056, 1293
Sau3AI	GATC	7 cut(s)	47, 280, 546, 770, 1661, 1704, 1844
Sau96I	GGNCC	8 cut(s)	159, 249, 437, 753, 851, 937, 1383, 1676
SchI	GAGTC	1 cut(s)	2048
ScrFI	CCNGG	4 cut(s)	104, 275, 1322, 1512
SduI	GDGCHC	5 cut(s)	878, 1243, 1288, 1896, 2037
SfaNI	GCATC	7 cut(s)	26, 490, 492, 730, 1579, 1777, 1888
SfcI	CTRYAG	1 cut(s)	861
Sfr274I	CTCGAG	1 cut(s)	2036
SinI	GGWCC	5 cut(s)	249, 437, 851, 1383, 1676
SlaI	CTCGAG	1 cut(s)	2036
SmiMI	CAYNNNNRTG	1 cut(s)	1712
SmlI	CTYRAG	2 cut(s)	657, 2036
SmoI	CTYRAG	2 cut(s)	657, 2036
Sse9I	AATT	5 cut(s)	341, 1212, 1569, 1692, 2148
SseBI	AGGCCT	1 cut(s)	1320
SsiI	CCGC	7 cut(s)	41, 45, 152, 162, 932, 1786, 2153
SspI	AATATT	3 cut(s)	525, 894, 1117
SspMI	CTAG	5 cut(s)	428, 461, 1164, 1289, 1668
SstI	GAGCTC	1 cut(s)	2037
StuI	AGGCCT	1 cut(s)	1320
StyD4I	CCNGG	4 cut(s)	102, 273, 1320, 1510
StyI	CCWWGG	3 cut(s)	915, 1411, 2067
TaaI	ACNGT	3 cut(s)	301, 1263, 1522
TaiI	ACGT	3 cut(s)	116, 203, 1639
TaqI	TCGA	7 cut(s)	170, 182, 279, 1819, 2037, 2103, 2146
TaqII	GACCGA	1 cut(s)	1088
TasI	AATT	5 cut(s)	341, 1212, 1569, 1692, 2148
TatI	WGTACW	2 cut(s)	1397, 1776
TauI	GCSGC	2 cut(s)	154, 164
Tru1I	TTAA	7 cut(s)	476, 572, 717, 897, 1757, 1934, 2190
Tru9I	TTAA	7 cut(s)	476, 572, 717, 897, 1757, 1934, 2190
TscAI	CASTG	6 cut(s)	517, 717, 865, 1266, 1286, 1525
TseI	GCWGC	4 cut(s)	97, 845, 1055, 1292
TspDTI	ATGAA	9 cut(s)	586, 738, 815, 1116, 1197, 1485, 1659, 2010, 2122
TspGWI	ACGGA	1 cut(s)	381
TspRI	CASTG	6 cut(s)	517, 717, 865, 1266, 1286, 1525
VneI	GTGCAC	1 cut(s)	1892
VpaK11BI	GGWCC	5 cut(s)	249, 437, 851, 1383, 1676
XagI	CCTNNNNNAGG	2 cut(s)	1149, 1162
XapI	RAATTY	2 cut(s)	1692, 2148
XceI	RCATGY	1 cut(s)	1925
XcmI	CCANNNNNNNNNTGG	1 cut(s)	805
XhoI	CTCGAG	1 cut(s)	2036
XmnI	GAANNNNTTC	1 cut(s)	2109
XspI	CTAG	5 cut(s)	428, 461, 1164, 1289, 1668
ZraI	GACGTC	1 cut(s)	114
Zsp2I	ATGCAT	1 cut(s)	560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.