Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0007250

Physical Location & Seq

Genomic Coordinates Reverse (-)

42828603 .. 42837821

Gene Structure 9219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG292500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGGAGATAACCTACGCAACCCCAAGCAACTCCGATTTAGCGGGCGGATCCTCCTCCATGCCGACGACGACCCGACCCGTCCGGATTATCCCCTTGCAGCACCCGGAAACGTCGTCGGTGTCGTCGTCGTCCTCCTCAAATGCGTCGCCGCTGTGGGCCGCGCTGTCGAGGTGGAAATCGAAGGTCGTCAGCATGACGTGGATTGAGTGGCTGGAGCTGTTTCTGCCTTGCTTCCGGTGGATTCGGACCTACAAATGGCGCGAGTATCTCCAGGTCGATCTCATGGCCGGAATGACCGTCGGCGTCATGCTCGTTCCTCAGGCAATGTCTTATGCAAAATTGGCTGGGCTTGAACCCATATATGGACTTTACTCTGGATTTGTACCTTTATTTGTGTATGCTATATTTGGCTCGTCTCGTCAGCTAGCTGTTGGTCCAGTAGCGTTGGTTTCACTCCTAGTCTCCAATGTTTTAAGTGGCATCGTTGATTCTTCTGATGTGTTATACACTGAGCTGGCAATATTATTGGCACTCATGGTTGGGATCATGGAATGCATTTTGGGGCTTTTAAGGCTTGGATGGATTATTCGCTTCATCAGCCACTCAGTCATTTCTGGTTTTACGACTGCTTCAGCCATTGTGATTGCTTTATCTCAAGCAAAATACTTCTTGGGATATGATGTAGAACGAAGTAGCGAGATTGTGCCACTGATTGAGAGCATTATATCTGGAGCTGATGCGTTTTCATGGCCCCCTTTCGTAATGGGATCCGTCATTCTTGCGATACTATTGACCATGAAACACTTGGGAAAGACAAAGAAACACTTGCGTTTCCTGAGAGCAGCAGGTCCCCTCACTGCAGTCCTTTTGGGCACTATTTTTGTAAAAATATTTAATCCATCTTCCATATCCTTGGTAGGAGACATACCGCAGGGCCTTCCATCATTTTCCATCCCTAAAGCTTTTGGATATGCTACATCTTTGATTCCGACTGCGCTTCTCATTACTGGTGTAGCTATTTTGGAATCTGTGGGCATTGCAAAAGCATTAGCAGCAAAGAATGGCTATGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGGGTGGCAAATATTTTTGGTTCATTTTTTTCTGCATACCCTACAACAGGTTCCTTTTCTAGGTCAGCTGTGAATAATGAAAGTGGAGCAAAAACTGGCTTATCTGGAATTGTTATGGGATTTATAATGGGGTGTGCCCTACTATTTATGACTACACTGTTTGAATCCATACCCCAGTGTGCTCTAGCTGCCATTGTCATTTCTGCTGTAATAGGCCTGGTGGATTATGAGGAGGCTATATTTTTATGGCGAGTGGATAAGAAAGATTTTCTTCTTTGGACCATCACAAGCAGTACAACTTTGTTCCTTGGCATTGAGATTGGCGTCCTTGTCGGGGTTGGTGTTTCACTTGCATTTGTTATATATGAATCAGCAAACCCCCATATTGCTGTCTTGGGGCGTCTCCCAGGTACCACTGTTTACAGAAATACACAACAATATCCAGAAGCATATACATACAATGGAATTGTGATTGTTCGGATTGATGCACCTATTTACTTTGCTAACATTAGTTACATAAAAGACAGGCTACGTGAATATGAAGTGGAGGTTGATAAATCTACTAGCCGTGGACCAGAAGTTGAAAGAATTTATTTTGTAATCATAGAGATGGCACCTGTAACATATATAGATTCAAGTGGTGTCCAAGCTTTAAGAGAGTTGCATCAGGAGTACAAGTTGCGGGACATCCAGATTGCCATTTCAAATCTCAATCGAGAAACTCTGATGACCTTATCAAGATCAGGCGTAGTAGAGCTGATTGGAAAGGAGTGGTTCTTCGTAAGAGTGCACGATGCTGTTCAAGTTTGCCTTCAGCATGTTCAGAGCTTAAAAGAGACACCTAAGATGGCCGACCCTCTGACTGAAGAGAGGCAGAGTTCCTTCCAGAGATTTCTTAGACAAAGAGCAGAGGATTCATCACTATCCGAGCTGGAGTCTGGGAACCAGACATCTTTAGTTACCAAGGAAAGCGACCCTCAGTTGGAGCCTCTATTGTCTCGAAAATCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008272 GO:0008509 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

704

Amino Acids

77.18

Weight (kDa)

6.02

Isoelectric Point (pI)

41.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfate_transp	PF00916	90 - 463	5.9e-128	Sulfate permease family
STAS	PF01740	514 - 633	3.4e-24	STAS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007250)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12520 AT3G12520 AT3G12520 AT5G13550
fragaria_vesca	FvH4_7g21210 FvH4_7g21210 FvH4_7g21210
malus_domestica	MD07G1189900.v1.1
prunus_persica	Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1 Prupe.2G227400_v2.0.a1
pyrus_communis	pycom01g14690 pycom07g17950
rosa_chinensis	RchiOBHm_Chr1g0365661
rosa_laevigata	RLG00000027419
rosa_multiflora	Rmu_sc0002093.1_g000005
rosa_roxburghii	Rroxscaffold_4G00291110
rosa_rugosa	Rorug01G0322400 Rorug01G0322400
rosa_samantha	Rh1AG331100 Rh1BG292500 Rh1CG309100 Rh1DG324100
rosa_wichuraiana	Rw1G029410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1226
Acc36I	ACCTGC	1 cut(s)	836
Acc65I	GGTACC	1 cut(s)	1511
AccB1I	GGYRCC	2 cut(s)	1511, 1714
AccII	CGCG	2 cut(s)	161, 261
AccIII	TCCGGA	1 cut(s)	81
AciI	CCGC	6 cut(s)	41, 45, 149, 159, 929, 1783
AclWI	GGATC	5 cut(s)	42, 55, 551, 762, 775
AcoI	YGGCCR	2 cut(s)	285, 1950
AcsI	RAATTY	1 cut(s)	1689
AcuI	CTGAAG	3 cut(s)	615, 1898, 1986
AcyI	GRCGYC	3 cut(s)	303, 1425, 1501
AfaI	GTAC	4 cut(s)	384, 1396, 1513, 1775
AfiI	CCNNNNNNNGG	6 cut(s)	255, 362, 1148, 1161, 1435, 2083
AgsI	TTSAA	7 cut(s)	353, 1080, 1265, 1685, 1737, 1806, 1904
AjiI	CACGTC	1 cut(s)	198
AjnI	CCWGG	3 cut(s)	270, 1317, 1507
Alw21I	GWGCWC	2 cut(s)	1285, 1893
Alw26I	GTCTC	6 cut(s)	420, 466, 915, 1508, 1931, 2103
Alw44I	GTGCAC	1 cut(s)	1889
AlwI	GGATC	5 cut(s)	42, 55, 551, 762, 775
Aor13HI	TCCGGA	1 cut(s)	81
AoxI	GGCC	6 cut(s)	156, 285, 749, 934, 1315, 1950
ApaLI	GTGCAC	1 cut(s)	1889
ApeKI	GCWGC	4 cut(s)	97, 842, 1052, 1289
ApoI	RAATTY	1 cut(s)	1689
Asp700I	GAANNNNTTC	1 cut(s)	2107
Asp718I	GGTACC	1 cut(s)	1511
AspLEI	GCGC	3 cut(s)	163, 261, 997
AspS9I	GGNCC	8 cut(s)	156, 246, 434, 750, 848, 934, 1380, 1673
AsuC2I	CCSGG	1 cut(s)	104
AsuNHI	GCTAGC	1 cut(s)	424
AvaII	GGWCC	5 cut(s)	246, 434, 848, 1380, 1673
AxyI	CCTNAGG	1 cut(s)	318
BaeGI	GKGCMC	3 cut(s)	875, 1240, 1893
BaeI	ACNNNNGTAYC	2 cut(s)	1503, 1536
BamHI	GGATCC	2 cut(s)	47, 767
BanI	GGYRCC	2 cut(s)	1511, 1714
Bbv12I	GWGCWC	2 cut(s)	1285, 1893
BbvI	GCAGC	4 cut(s)	109, 854, 1064, 1276
BccI	CCATC	7 cut(s)	573, 907, 949, 959, 1391, 1705, 1942
BceAI	ACGGC	1 cut(s)	1653
BciT130I	CCWGG	3 cut(s)	272, 1319, 1509
BcnI	CCSGG	1 cut(s)	104
BcoDI	GTCTC	6 cut(s)	420, 466, 915, 1508, 1931, 2103
BfaI	CTAG	5 cut(s)	425, 458, 1161, 1286, 1665
BfmI	CTRYAG	1 cut(s)	858
BfuAI	ACCTGC	1 cut(s)	836
BisI	GCNGC	6 cut(s)	98, 149, 159, 843, 1053, 1290
BlsI	GCNGC	6 cut(s)	99, 150, 160, 844, 1054, 1291
Bme1390I	CCNGG	4 cut(s)	104, 272, 1319, 1509
Bme18I	GGWCC	5 cut(s)	246, 434, 848, 1380, 1673
BmgBI	CACGTC	1 cut(s)	198
BmgT120I	GGNCC	8 cut(s)	156, 246, 434, 750, 848, 934, 1380, 1673
BmiI	GGNNCC	9 cut(s)	49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
BmrFI	CCNGG	4 cut(s)	104, 272, 1319, 1509
BmrI	ACTGGG	1 cut(s)	1270
BmsI	GCATC	5 cut(s)	489, 727, 1576, 1774, 1885
BmtI	GCTAGC	1 cut(s)	428
BmuI	ACTGGG	1 cut(s)	1270
BpmI	CTGGAG	4 cut(s)	233, 254, 750, 2054
BpuEI	CTTGAG	1 cut(s)	639
BpuMI	CCSGG	1 cut(s)	104
BsaAI	YACGTR	1 cut(s)	1634
BsaBI	GATNNNNATC	1 cut(s)	1080
BsaHI	GRCGYC	3 cut(s)	303, 1425, 1501
BsaJI	CCNNGG	5 cut(s)	912, 1408, 1507, 1669, 2064
BsaWI	WCCGGW	2 cut(s)	81, 234
BsaXI	ACNNNNNCTCC	2 cut(s)	1763, 1793
Bsc4I	CCNNNNNNNGG	6 cut(s)	255, 362, 1148, 1161, 1435, 2083
Bse1I	ACTGG	4 cut(s)	437, 1012, 1201, 1276
Bse21I	CCTNAGG	1 cut(s)	318
Bse3DI	GCAATG	2 cut(s)	330, 1035
Bse8I	GATNNNNATC	1 cut(s)	1080
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	3 cut(s)	272, 1319, 1509
BseDI	CCNNGG	5 cut(s)	912, 1408, 1507, 1669, 2064
BseGI	GGATG	3 cut(s)	584, 951, 1788
BseJI	GATNNNNATC	1 cut(s)	1080
BseLI	CCNNNNNNNGG	6 cut(s)	255, 362, 1148, 1161, 1435, 2083
BseMI	GCAATG	2 cut(s)	330, 1035
BseMII	CTCAG	5 cut(s)	332, 501, 618, 827, 2093
BseNI	ACTGG	4 cut(s)	437, 1012, 1201, 1276
BseRI	GAGGAG	3 cut(s)	43, 124, 1346
BseSI	GKGCMC	3 cut(s)	875, 1240, 1893
BseXI	GCAGC	4 cut(s)	109, 854, 1064, 1276
BseYI	CCCAGC	1 cut(s)	344
Bsh1236I	CGCG	2 cut(s)	161, 261
BshFI	GGCC	6 cut(s)	158, 287, 751, 936, 1317, 1952
BshNI	GGYRCC	2 cut(s)	1511, 1714
BsiHKAI	GWGCWC	2 cut(s)	1285, 1893
BsiSI	CCGG	4 cut(s)	82, 104, 235, 288
BslFI	GGGAC	2 cut(s)	834, 1799
BslI	CCNNNNNNNGG	6 cut(s)	255, 362, 1148, 1161, 1435, 2083
BsmAI	GTCTC	6 cut(s)	420, 466, 915, 1508, 1931, 2103
BsmBI	CGTCTC	2 cut(s)	420, 1508
BsmFI	GGGAC	2 cut(s)	834, 1799
BsmI	GAATGC	1 cut(s)	557
BsnI	GGCC	6 cut(s)	158, 287, 751, 936, 1317, 1952
Bsp1286I	GDGCHC	4 cut(s)	875, 1240, 1285, 1893
Bsp13I	TCCGGA	1 cut(s)	81
Bsp143I	GATC	5 cut(s)	47, 277, 543, 767, 1841
BspACI	CCGC	6 cut(s)	41, 45, 149, 159, 929, 1783
BspANI	GGCC	6 cut(s)	158, 287, 751, 936, 1317, 1952
BspCNI	CTCAG	5 cut(s)	331, 502, 617, 828, 2092
BspEI	TCCGGA	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	161, 261
BspLI	GGNNCC	9 cut(s)	49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
BspMAI	CTGCAG	1 cut(s)	862
BspMI	ACCTGC	1 cut(s)	836
BspOI	GCTAGC	1 cut(s)	428
BspPI	GGATC	5 cut(s)	42, 55, 551, 762, 775
BspT107I	GGYRCC	2 cut(s)	1511, 1714
BsrDI	GCAATG	2 cut(s)	330, 1035
BsrI	ACTGG	4 cut(s)	437, 1012, 1201, 1276
BssECI	CCNNGG	5 cut(s)	912, 1408, 1507, 1669, 2064
BssMI	GATC	5 cut(s)	47, 277, 543, 767, 1841
BssNI	GRCGYC	3 cut(s)	303, 1425, 1501
BssT1I	CCWWGG	3 cut(s)	912, 1408, 2064
Bst2UI	CCWGG	3 cut(s)	272, 1319, 1509
Bst4CI	ACNGT	3 cut(s)	298, 1260, 1519
Bst6I	CTCTTC	1 cut(s)	1962
BstACI	GRCGYC	3 cut(s)	303, 1425, 1501
BstBAI	YACGTR	1 cut(s)	1634
BstC8I	GCNNGC	3 cut(s)	43, 426, 516
BstDEI	CTNAG	7 cut(s)	318, 510, 604, 836, 1944, 1997, 2079
BstDSI	CCRYGG	1 cut(s)	1669
BstENI	CCTNNNNNAGG	2 cut(s)	1146, 1159
BstF5I	GGATG	3 cut(s)	584, 951, 1788
BstFNI	CGCG	2 cut(s)	161, 261
BstHHI	GCGC	3 cut(s)	163, 261, 997
BstKTI	GATC	5 cut(s)	50, 280, 546, 770, 1844
BstMAI	GTCTC	6 cut(s)	420, 466, 915, 1508, 1931, 2103
BstMBI	GATC	5 cut(s)	47, 277, 543, 767, 1841
BstMWI	GCNNNNNNNGC	6 cut(s)	223, 341, 571, 597, 1052, 1289
BstNI	CCWGG	3 cut(s)	272, 1319, 1509
BstNSI	RCATGY	1 cut(s)	1922
BstSCI	CCNGG	4 cut(s)	102, 270, 1317, 1507
BstSFI	CTRYAG	1 cut(s)	858
BstSLI	GKGCMC	3 cut(s)	875, 1240, 1893
BstUI	CGCG	2 cut(s)	161, 261
BstV1I	GCAGC	4 cut(s)	109, 854, 1064, 1276
BstX2I	RGATCY	2 cut(s)	47, 767
BstXI	CCANNNNNNTGG	1 cut(s)	913
BstYI	RGATCY	2 cut(s)	47, 767
Bsu36I	CCTNAGG	1 cut(s)	318
BsuRI	GGCC	6 cut(s)	158, 287, 751, 936, 1317, 1952
BtgI	CCRYGG	1 cut(s)	1669
BtrI	CACGTC	1 cut(s)	198
BtsCI	GGATG	3 cut(s)	584, 951, 1788
BtsI	GCAGTG	1 cut(s)	855
BtsIMutI	CAGTG	6 cut(s)	507, 707, 855, 1256, 1283, 1515
BveI	ACCTGC	1 cut(s)	836
Cac8I	GCNNGC	3 cut(s)	43, 426, 516
CfoI	GCGC	3 cut(s)	163, 261, 997
Cfr13I	GGNCC	8 cut(s)	156, 246, 434, 750, 848, 934, 1380, 1673
CseI	GACGC	4 cut(s)	132, 292, 1414, 1490
Csp6I	GTAC	4 cut(s)	383, 1395, 1512, 1774
CviAII	CATG	9 cut(s)	58, 193, 283, 307, 535, 547, 747, 796, 1919
CviQI	GTAC	4 cut(s)	383, 1395, 1512, 1774
DdeI	CTNAG	7 cut(s)	318, 510, 604, 836, 1944, 1997, 2079
DpnI	GATC	5 cut(s)	49, 279, 545, 769, 1843
DpnII	GATC	5 cut(s)	47, 277, 543, 767, 1841
EaeI	YGGCCR	2 cut(s)	285, 1950
Eam1104I	CTCTTC	1 cut(s)	1962
EarI	CTCTTC	1 cut(s)	1962
EciI	GGCGGA	1 cut(s)	60
Eco130I	CCWWGG	3 cut(s)	912, 1408, 2064
Eco147I	AGGCCT	1 cut(s)	1317
Eco47I	GGWCC	5 cut(s)	246, 434, 848, 1380, 1673
Eco57I	CTGAAG	3 cut(s)	615, 1898, 1986
Eco81I	CCTNAGG	1 cut(s)	318
EcoNI	CCTNNNNNAGG	2 cut(s)	1146, 1159
EcoO109I	RGGNCCY	2 cut(s)	848, 934
EcoRII	CCWGG	3 cut(s)	270, 1317, 1507
EcoT14I	CCWWGG	3 cut(s)	912, 1408, 2064
EcoT22I	ATGCAT	1 cut(s)	557
ErhI	CCWWGG	3 cut(s)	912, 1408, 2064
Esp3I	CGTCTC	2 cut(s)	420, 1508
FaeI	CATG	9 cut(s)	61, 196, 286, 310, 538, 550, 750, 799, 1922
FalI	AAGNNNNNCTT	6 cut(s)	809, 841, 1356, 1388, 1896, 1928
FaqI	GGGAC	2 cut(s)	834, 1799
FatI	CATG	9 cut(s)	57, 192, 282, 306, 534, 546, 746, 795, 1918
FauI	CCCGC	2 cut(s)	34, 1776
Fnu4HI	GCNGC	6 cut(s)	98, 149, 159, 843, 1053, 1290
FokI	GGATG	3 cut(s)	591, 938, 1775
Fsp4HI	GCNGC	6 cut(s)	98, 149, 159, 843, 1053, 1290
FspBI	CTAG	5 cut(s)	425, 458, 1161, 1286, 1665
GlaI	GCGC	3 cut(s)	162, 260, 996
GluI	GCNGC	6 cut(s)	98, 149, 159, 843, 1053, 1290
GsaI	CCCAGC	1 cut(s)	348
GsuI	CTGGAG	4 cut(s)	233, 254, 750, 2054
HaeIII	GGCC	6 cut(s)	158, 287, 751, 936, 1317, 1952
HapII	CCGG	4 cut(s)	82, 104, 235, 288
HgaI	GACGC	4 cut(s)	132, 292, 1414, 1490
HhaI	GCGC	3 cut(s)	163, 261, 997
Hin1I	GRCGYC	3 cut(s)	303, 1425, 1501
Hin1II	CATG	9 cut(s)	61, 196, 286, 310, 538, 550, 750, 799, 1922
Hin6I	GCGC	3 cut(s)	161, 259, 995
HinP1I	GCGC	3 cut(s)	161, 259, 995
HindIII	AAGCTT	2 cut(s)	960, 1749
HpaII	CCGG	4 cut(s)	82, 104, 235, 288
Hpy166II	GTNNAC	3 cut(s)	1522, 1673, 1891
Hpy188I	TCNGA	9 cut(s)	34, 246, 496, 990, 1581, 1827, 1926, 1962, 2029
Hpy8I	GTNNAC	3 cut(s)	1522, 1673, 1891
Hpy99I	CGWCG	8 cut(s)	67, 70, 115, 118, 127, 130, 148, 302
HpyAV	CCTTC	4 cut(s)	175, 947, 1922, 1993
HpyCH4III	ACNGT	3 cut(s)	298, 1260, 1519
HpyCH4IV	ACGT	3 cut(s)	110, 197, 1633
HpyF10VI	GCNNNNNNNGC	6 cut(s)	223, 341, 571, 597, 1052, 1289
HpyF3I	CTNAG	7 cut(s)	318, 510, 604, 836, 1944, 1997, 2079
HpySE526I	ACGT	3 cut(s)	110, 197, 1633
Hsp92I	GRCGYC	3 cut(s)	303, 1425, 1501
Hsp92II	CATG	9 cut(s)	61, 196, 286, 310, 538, 550, 750, 799, 1922
HspAI	GCGC	3 cut(s)	161, 259, 995
Kpn2I	TCCGGA	1 cut(s)	81
KpnI	GGTACC	1 cut(s)	1515
Kzo9I	GATC	5 cut(s)	47, 277, 543, 767, 1841
LmnI	GCTCC	4 cut(s)	214, 731, 1187, 2086
Lsp1109I	GCAGC	4 cut(s)	109, 854, 1064, 1276
LweI	GCATC	5 cut(s)	489, 727, 1576, 1774, 1885
MaeI	CTAG	5 cut(s)	425, 458, 1161, 1286, 1665
MaeII	ACGT	3 cut(s)	110, 197, 1633
MaeIII	GTNAC	3 cut(s)	1613, 1720, 2059
MalI	GATC	5 cut(s)	49, 279, 545, 769, 1843
MboI	GATC	5 cut(s)	47, 277, 543, 767, 1841
MboII	GAAGA	6 cut(s)	483, 894, 1364, 1870, 1979, 2100
MflI	RGATCY	2 cut(s)	47, 767
MhlI	GDGCHC	4 cut(s)	875, 1240, 1285, 1893
MluCI	AATT	4 cut(s)	338, 1209, 1566, 1689
MlyI	GAGTC	1 cut(s)	2045
MmeI	TCCRAC	3 cut(s)	1013, 1053, 2064
Mph1103I	ATGCAT	1 cut(s)	557
MroI	TCCGGA	1 cut(s)	81
MroXI	GAANNNNTTC	1 cut(s)	2107
MseI	TTAA	5 cut(s)	473, 569, 894, 1754, 1931
MslI	CAYNNNNRTG	1 cut(s)	1709
MspA1I	CMGCKG	2 cut(s)	151, 1169
MspI	CCGG	4 cut(s)	82, 104, 235, 288
MspR9I	CCNGG	4 cut(s)	104, 272, 1319, 1509
Mva1269I	GAATGC	1 cut(s)	557
MvaI	CCWGG	3 cut(s)	272, 1319, 1509
MvnI	CGCG	2 cut(s)	161, 261
MwoI	GCNNNNNNNGC	6 cut(s)	223, 341, 571, 597, 1052, 1289
NciI	CCSGG	1 cut(s)	104
NdeII	GATC	5 cut(s)	47, 277, 543, 767, 1841
NheI	GCTAGC	1 cut(s)	424
NlaIII	CATG	9 cut(s)	61, 196, 286, 310, 538, 550, 750, 799, 1922
NlaIV	GGNNCC	9 cut(s)	49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
NsiI	ATGCAT	1 cut(s)	557
NspI	RCATGY	1 cut(s)	1922
PceI	AGGCCT	1 cut(s)	1317
PcsI	WCGNNNNNNNCGW	2 cut(s)	119, 122
PctI	GAATGC	1 cut(s)	557
PdmI	GAANNNNTTC	1 cut(s)	2107
PfeI	GAWTC	9 cut(s)	241, 488, 985, 1025, 1076, 1265, 1469, 1733, 2015
PkrI	GCNGC	6 cut(s)	99, 150, 160, 844, 1054, 1291
PleI	GAGTC	1 cut(s)	2044
PpsI	GAGTC	1 cut(s)	2044
Ppu21I	YACGTR	1 cut(s)	1634
PpuMI	RGGWCCY	1 cut(s)	848
PsiI	TTATAA	1 cut(s)	1226
Psp5II	RGGWCCY	1 cut(s)	848
Psp6I	CCWGG	3 cut(s)	270, 1317, 1507
PspFI	CCCAGC	1 cut(s)	344
PspGI	CCWGG	3 cut(s)	270, 1317, 1507
PspN4I	GGNNCC	9 cut(s)	49, 752, 769, 850, 1153, 1513, 1716, 2045, 2088
PspPI	GGNCC	8 cut(s)	156, 246, 434, 750, 848, 934, 1380, 1673
PspPPI	RGGWCCY	1 cut(s)	848
PstI	CTGCAG	1 cut(s)	862
PsuI	RGATCY	2 cut(s)	47, 767
PvuII	CAGCTG	1 cut(s)	1169
RsaI	GTAC	4 cut(s)	384, 1396, 1513, 1775
RsaNI	GTAC	4 cut(s)	383, 1395, 1512, 1774
RseI	CAYNNNNRTG	1 cut(s)	1709
SaqAI	TTAA	5 cut(s)	473, 569, 894, 1754, 1931
SatI	GCNGC	6 cut(s)	98, 149, 159, 843, 1053, 1290
Sau3AI	GATC	5 cut(s)	47, 277, 543, 767, 1841
Sau96I	GGNCC	8 cut(s)	156, 246, 434, 750, 848, 934, 1380, 1673
SchI	GAGTC	1 cut(s)	2045
ScrFI	CCNGG	4 cut(s)	104, 272, 1319, 1509
SduI	GDGCHC	4 cut(s)	875, 1240, 1285, 1893
SfaNI	GCATC	5 cut(s)	489, 727, 1576, 1774, 1885
SfcI	CTRYAG	1 cut(s)	858
SinI	GGWCC	5 cut(s)	246, 434, 848, 1380, 1673
SmiMI	CAYNNNNRTG	1 cut(s)	1709
SmlI	CTYRAG	1 cut(s)	654
SmoI	CTYRAG	1 cut(s)	654
Sse9I	AATT	4 cut(s)	338, 1209, 1566, 1689
SseBI	AGGCCT	1 cut(s)	1317
SsiI	CCGC	6 cut(s)	41, 45, 149, 159, 929, 1783
SspI	AATATT	3 cut(s)	522, 891, 1114
SspMI	CTAG	5 cut(s)	425, 458, 1161, 1286, 1665
StuI	AGGCCT	1 cut(s)	1317
StyD4I	CCNGG	4 cut(s)	102, 270, 1317, 1507
StyI	CCWWGG	3 cut(s)	912, 1408, 2064
TaaI	ACNGT	3 cut(s)	298, 1260, 1519
TaiI	ACGT	3 cut(s)	113, 200, 1636
TaqI	TCGA	5 cut(s)	167, 179, 276, 1816, 2101
TaqII	GACCGA	1 cut(s)	1085
TasI	AATT	4 cut(s)	338, 1209, 1566, 1689
TatI	WGTACW	2 cut(s)	1394, 1773
TauI	GCSGC	2 cut(s)	151, 161
TfiI	GAWTC	9 cut(s)	241, 488, 985, 1025, 1076, 1265, 1469, 1733, 2015
Tru1I	TTAA	5 cut(s)	473, 569, 894, 1754, 1931
Tru9I	TTAA	5 cut(s)	473, 569, 894, 1754, 1931
TscAI	CASTG	6 cut(s)	514, 714, 862, 1263, 1283, 1522
TseI	GCWGC	4 cut(s)	97, 842, 1052, 1289
TspDTI	ATGAA	8 cut(s)	583, 735, 812, 1113, 1194, 1482, 1656, 2007
TspGWI	ACGGA	1 cut(s)	760
TspRI	CASTG	6 cut(s)	514, 714, 862, 1263, 1283, 1522
VneI	GTGCAC	1 cut(s)	1889
VpaK11BI	GGWCC	5 cut(s)	246, 434, 848, 1380, 1673
XagI	CCTNNNNNAGG	2 cut(s)	1146, 1159
XapI	RAATTY	1 cut(s)	1689
XceI	RCATGY	1 cut(s)	1922
XcmI	CCANNNNNNNNNTGG	1 cut(s)	802
XmnI	GAANNNNTTC	1 cut(s)	2107
XspI	CTAG	5 cut(s)	425, 458, 1161, 1286, 1665
Zsp2I	ATGCAT	1 cut(s)	557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.