Rorug01G0322400

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
44172890 .. 44177429
4540 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0322400.1

Sequence Viewer

Length: 1926 bp
ATGGTGGGTGAAATGGAGGCGGTAAAAATTGAGAGGAAGGAGGAGGAAGAAGAGGGTGGTGGTAGCTCTACAGAGGTGGTGACGTGGGGGAACTATCTTCCCACCACTGTGCTTAGGGTTCTATTGGTTGAAGCTGATGACTCTACTCGTCAGATTATCACTGCTCTTCTTCGGAAATGCAATTACAGAGTTGTTTCGGTTTCTGATGGATTGAGGGCGTGGGAGACGATAAAGGTGAAGCATAATAAGATAGACCTTATTCTGACTGAGGCAGAGTTGCCATCGATATCTGGATTTGCGCTTCTTACTTTGGTGATGGAGCATGATATTTGCAAGCACATACCTGTTATAATGATGTCGTCTCAAGACTCTGTGAATATGGTTTTGAAGTGCATGCAAAAAGGGGCCGCCGACTATCTGATTAAGCCGGTCAGGAGGAATGAGCTGAGGAACCTTTGGCAACATGTGTGGAGAAGGCACACTCTTGCTAGTGGACAAGCTCCTCAGAACTTAACAGTTTCACAACAAAAAGTTGAAGCCACTTCGGAAAATAATGCAGCAAGTAATCATTCAAATGACTATGCAGCTTGTACGCACAAAACTAAGGGATTCAGTCAGAAAGCAAGTGATGCCCAAGATATATCGCAGCTAAAGTATGGCAGTGCTTCTAATTTGAGCAATACAGATATTGAAATGCTTGAAGATTGTGATAGATTGGACAATGAATCTGTTGTGCATGAGAGTGAAACTAAAGGTACATTTGGGTCAGATATTGTACCTTTGGATGAAGCACTTAACTCAGTTGCCTCAAGACTCAGAGAGGAAAATGTTTCTGCTAAAACAATGGTTCAAGATGAAGGTATCCAAGCAGAAATTTGTGAAGAAAAAGCTAAAACTGCTAGTGGAACTCGCAGCTTCCAATATGAGGTTGAACCCTCAGTTGGGGTCAGGGACTTGCTTTGCACCTTTGACAATTGGCCCAACTGCAACGTTGGAAGTTCTAACAGAAAAGATGATGGTATGAAGCACTTTGGATTGGAACTGTCTTTAAGAAGTTCGGATGGTTCACACAAGGAATTGACTGAGGAGAGGCCTGCACTGAAACATTCTGATGCCTCTGCCTTTTCACGGTATAATAATAGCAAGGGACTGCAACCCCTTTTCCCGACATTTCCCAGTACAAAATCGGAGGATGCAAGCAATTCACATGATAGACAGGACAATATGGTAAACTTTGTTGATGGTCAAACTGAGCAAGCTGATTCATCCATCCAAGGCCCTCAACTTGGGGTGTTTCCTGTCACTAGTGTAAGGTCTGATAATATGTGTGCTGGATACAGTCATTATTTCCCATCCTTGTTTCTTGGACAATCCGATTTGACCCCTGTGTTCAGTATCAAATCAGTTGGCCAGAGCACACAATCCACCTTTCACTCAGAACAAGGTTATGACGAGTCTGATAAAACTACTGGTAAATCTATTGACCAAACCCTGCATGAGCAGAACAAACTGGAGAATGTGGAGCATTTGAAACCTGGTTCTCCTGCGGCTTCTCAGAGTGGTTGTAGTAGTTTGGGCAATTGTACTGTTGATAATCATATTAGTGGCAGCGCATATGGAAGCATTTGCAGTGGCAATGATGGAAAGGCCAGTTTGGCTGTAGCAGGTGAGATGGCCACAGCTTCTGAGAGTTTGAATGACAGTGGTCGCTATGTTCGTGAGGGATCTGGAGTGGATTCTCTTCGTTCCAGCCAAAGGGAAGCAGCTCTGACCAAGTTCCGACTGAAGCGGAAAGATAGATGCTTTGAGAAGAAGGTTAGATACCAAAGCCGGAAAATACTGGCAGAGAAGCGGCCAAGAGTGAAAGGTCAATTTGTGCATAGAGCTCATACTGATCCTCCAACTGCCAATGCTGTTGGTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

641

Amino Acids

70.48

Weight (kDa)

5.81

Isoelectric Point (pI)

49.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Response_reg PF00072 40 - 151 9.9e-22 Response regulator receiver domain
CCT PF06203 586 - 627 7.6e-17 CCT motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 350
AarI CACCTGC 1 cut(s) 1655
Acc36I ACCTGC 1 cut(s) 1655
AciI CCGC 5 cut(s) 20, 408, 1547, 1789, 1852
AclI AACGTT 1 cut(s) 990
AclWI GGATC 2 cut(s) 1732, 1889
AcoI YGGCCR 3 cut(s) 1408, 1674, 1853
AcsI RAATTY 1 cut(s) 873
AcuI CTGAAG 1 cut(s) 1805
AfaI GTAC 5 cut(s) 592, 757, 777, 1180, 1585
AfiI CCNNNNNNNGG 6 cut(s) 925, 941, 942, 1128, 1286, 1755
AflIII ACRYGT 1 cut(s) 463
AhlI ACTAGT 1 cut(s) 1304
AjiI CACGTC 1 cut(s) 84
AjnI CCWGG 1 cut(s) 1534
AjuI GAANNNNNNNTTGG 2 cut(s) 924, 956
AleI CACNNNNGTG 1 cut(s) 107
Alw21I GWGCWC 2 cut(s) 1418, 1888
Alw26I GTCTC 2 cut(s) 218, 366
AlwI GGATC 2 cut(s) 1732, 1889
AlwNI CAGNNNCTG 1 cut(s) 1685
AoxI GGCC 8 cut(s) 405, 977, 1091, 1276, 1408, 1647, 1674, 1853
ApeKI GCWGC 6 cut(s) 557, 584, 646, 912, 1608, 1763
ApoI RAATTY 1 cut(s) 873
AspLEI GCGC 2 cut(s) 301, 1613
AspS9I GGNCC 3 cut(s) 405, 978, 1277
AsuHPI GGTGA 5 cut(s) 20, 91, 247, 325, 1679
BalI TGGCCA 2 cut(s) 1410, 1676
BanII GRGCYC 1 cut(s) 1888
BarI GAAGNNNNNNTAC 2 cut(s) 1805, 1837
Bbv12I GWGCWC 2 cut(s) 1418, 1888
BbvCI CCTCAGC 1 cut(s) 446
BbvI GCAGC 6 cut(s) 569, 596, 658, 924, 1620, 1775
BciT130I CCWGG 1 cut(s) 1536
BciVI GTATCC 2 cut(s) 872, 1328
BcoDI GTCTC 2 cut(s) 218, 366
BcuI ACTAGT 1 cut(s) 1304
BfaI CTAG 3 cut(s) 489, 900, 1305
BfmI CTRYAG 2 cut(s) 69, 1659
BfuAI ACCTGC 1 cut(s) 1655
BfuI GTATCC 2 cut(s) 872, 1328
BglI GCCNNNNNGGC 1 cut(s) 1655
BisI GCNGC 9 cut(s) 408, 558, 585, 647, 913, 1548, 1609, 1764, 1853
BlsI GCNGC 9 cut(s) 409, 559, 586, 648, 914, 1549, 1610, 1765, 1854
Bme1390I CCNGG 1 cut(s) 1536
BmgBI CACGTC 1 cut(s) 84
BmgT120I GGNCC 3 cut(s) 405, 978, 1277
BmiI GGNNCC 2 cut(s) 406, 452
BmrFI CCNGG 1 cut(s) 1536
BmrI ACTGGG 1 cut(s) 1170
BmsI GCATC 4 cut(s) 619, 1102, 1183, 1790
BmuI ACTGGG 1 cut(s) 1170
BoxI GACNNNNGTC 1 cut(s) 1704
BpmI CTGGAG 2 cut(s) 1532, 1749
Bpu10I CCTNAGC 2 cut(s) 113, 446
BpuEI CTTGAG 2 cut(s) 348, 793
Bsa29I ATCGAT 1 cut(s) 284
BsaJI CCNNGG 1 cut(s) 1273
BsaXI ACNNNNNCTCC 2 cut(s) 1882, 1912
Bsc4I CCNNNNNNNGG 6 cut(s) 925, 941, 942, 1128, 1286, 1755
Bse118I RCCGGY 1 cut(s) 427
Bse1I ACTGG 5 cut(s) 1176, 1474, 1515, 1650, 1845
Bse3DI GCAATG 1 cut(s) 1642
BseBI CCWGG 1 cut(s) 1536
BseCI ATCGAT 1 cut(s) 284
BseDI CCNNGG 1 cut(s) 1273
BseGI GGATG 6 cut(s) 790, 1066, 1198, 1265, 1269, 1352
BseLI CCNNNNNNNGG 6 cut(s) 925, 941, 942, 1128, 1286, 1755
BseMI GCAATG 1 cut(s) 1642
BseNI ACTGG 5 cut(s) 1176, 1474, 1515, 1650, 1845
BseRI GAGGAG 3 cut(s) 56, 492, 1100
BseXI GCAGC 6 cut(s) 569, 596, 658, 924, 1620, 1775
BsgI GTGCAG 1 cut(s) 1080
BshFI GGCC 8 cut(s) 407, 979, 1093, 1278, 1410, 1649, 1676, 1855
BshVI ATCGAT 1 cut(s) 284
BsiHKAI GWGCWC 2 cut(s) 1418, 1888
BsiSI CCGG 2 cut(s) 428, 1831
BslFI GGGAC 2 cut(s) 965, 1161
BslI CCNNNNNNNGG 6 cut(s) 925, 941, 942, 1128, 1286, 1755
BsmAI GTCTC 2 cut(s) 218, 366
BsmBI CGTCTC 2 cut(s) 218, 366
BsmFI GGGAC 2 cut(s) 965, 1161
BsnI GGCC 8 cut(s) 407, 979, 1093, 1278, 1410, 1649, 1676, 1855
Bsp1286I GDGCHC 2 cut(s) 1418, 1888
Bsp143I GATC 2 cut(s) 1724, 1894
BspACI CCGC 5 cut(s) 20, 408, 1547, 1789, 1852
BspANI GGCC 8 cut(s) 407, 979, 1093, 1278, 1410, 1649, 1676, 1855
BspDI ATCGAT 1 cut(s) 284
BspHI TCATGA 1 cut(s) 1922
BspLI GGNNCC 2 cut(s) 406, 452
BspMI ACCTGC 1 cut(s) 1655
BspPI GGATC 2 cut(s) 1732, 1889
BspQI GCTCTTC 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 1642
BsrFI RCCGGY 1 cut(s) 427
BsrI ACTGG 5 cut(s) 1176, 1474, 1515, 1650, 1845
BssAI RCCGGY 1 cut(s) 427
BssECI CCNNGG 1 cut(s) 1273
BssMI GATC 2 cut(s) 1724, 1894
BssT1I CCWWGG 1 cut(s) 1273
Bst2UI CCWGG 1 cut(s) 1536
Bst4CI ACNGT 7 cut(s) 109, 517, 1044, 1131, 1340, 1588, 1703
Bst6I CTCTTC 3 cut(s) 45, 171, 1746
BstAPI GCANNNNNTGC 1 cut(s) 629
BstC8I GCNNGC 5 cut(s) 335, 395, 1095, 1198, 1257
BstF5I GGATG 6 cut(s) 790, 1066, 1198, 1265, 1269, 1352
BstHHI GCGC 2 cut(s) 301, 1613
BstKTI GATC 2 cut(s) 1727, 1897
BstMAI GTCTC 2 cut(s) 218, 366
BstMBI GATC 2 cut(s) 1724, 1894
BstMWI GCNNNNNNNGC 3 cut(s) 629, 896, 1655
BstNI CCWGG 1 cut(s) 1536
BstNSI RCATGY 2 cut(s) 397, 467
BstPAI GACNNNNGTC 1 cut(s) 1704
BstSCI CCNGG 1 cut(s) 1534
BstSFI CTRYAG 2 cut(s) 69, 1659
BstV1I GCAGC 6 cut(s) 569, 596, 658, 924, 1620, 1775
BstX2I RGATCY 1 cut(s) 1724
BstYI RGATCY 1 cut(s) 1724
Bsu15I ATCGAT 1 cut(s) 284
BsuI GTATCC 2 cut(s) 872, 1328
BsuRI GGCC 8 cut(s) 407, 979, 1093, 1278, 1410, 1649, 1676, 1855
BsuTUI ATCGAT 1 cut(s) 284
BtrI CACGTC 1 cut(s) 84
BtsCI GGATG 6 cut(s) 790, 1066, 1198, 1265, 1269, 1352
BtsI GCAGTG 3 cut(s) 159, 667, 1636
BtsIMutI CAGTG 6 cut(s) 105, 159, 667, 1097, 1636, 1708
BveI ACCTGC 1 cut(s) 1655
Cac8I GCNNGC 5 cut(s) 335, 395, 1095, 1198, 1257
CaiI CAGNNNCTG 1 cut(s) 1685
CciI TCATGA 1 cut(s) 1922
CfoI GCGC 2 cut(s) 301, 1613
Cfr10I RCCGGY 1 cut(s) 427
Cfr13I GGNCC 3 cut(s) 405, 978, 1277
ClaI ATCGAT 1 cut(s) 284
CsiI ACCWGGT 1 cut(s) 1534
Csp6I GTAC 5 cut(s) 591, 756, 776, 1179, 1584
CspCI CAANNNNNGTGG 2 cut(s) 449, 484
CviAII CATG 7 cut(s) 323, 394, 464, 737, 1208, 1496, 1923
CviQI GTAC 5 cut(s) 591, 756, 776, 1179, 1584
DpnI GATC 2 cut(s) 1726, 1896
DpnII GATC 2 cut(s) 1724, 1894
EaeI YGGCCR 3 cut(s) 1408, 1674, 1853
Eam1104I CTCTTC 3 cut(s) 45, 171, 1746
EarI CTCTTC 3 cut(s) 45, 171, 1746
Ecl136II GAGCTC 1 cut(s) 1886
Eco130I CCWWGG 1 cut(s) 1273
Eco147I AGGCCT 1 cut(s) 1093
Eco24I GRGCYC 1 cut(s) 1888
Eco32I GATATC 1 cut(s) 288
Eco53kI GAGCTC 1 cut(s) 1886
Eco57I CTGAAG 1 cut(s) 1805
EcoICRI GAGCTC 1 cut(s) 1886
EcoO109I RGGNCCY 1 cut(s) 1277
EcoRII CCWGG 1 cut(s) 1534
EcoRV GATATC 1 cut(s) 288
EcoT14I CCWWGG 1 cut(s) 1273
EcoT38I GRGCYC 1 cut(s) 1888
ErhI CCWWGG 1 cut(s) 1273
Esp3I CGTCTC 2 cut(s) 218, 366
FaeI CATG 7 cut(s) 326, 397, 467, 740, 1211, 1499, 1926
FaqI GGGAC 2 cut(s) 965, 1161
FatI CATG 7 cut(s) 322, 393, 463, 736, 1207, 1495, 1922
FauNDI CATATG 1 cut(s) 1615
Fnu4HI GCNGC 9 cut(s) 408, 558, 585, 647, 913, 1548, 1609, 1764, 1853
FokI GGATG 6 cut(s) 797, 1073, 1205, 1252, 1256, 1339
FriOI GRGCYC 1 cut(s) 1888
Fsp4HI GCNGC 9 cut(s) 408, 558, 585, 647, 913, 1548, 1609, 1764, 1853
FspBI CTAG 3 cut(s) 489, 900, 1305
GlaI GCGC 2 cut(s) 300, 1612
GluI GCNGC 9 cut(s) 408, 558, 585, 647, 913, 1548, 1609, 1764, 1853
GsuI CTGGAG 2 cut(s) 1532, 1749
HaeIII GGCC 8 cut(s) 407, 979, 1093, 1278, 1410, 1649, 1676, 1855
HapII CCGG 2 cut(s) 428, 1831
HhaI GCGC 2 cut(s) 301, 1613
Hin1II CATG 7 cut(s) 326, 397, 467, 740, 1211, 1499, 1926
Hin6I GCGC 2 cut(s) 299, 1611
HinP1I GCGC 2 cut(s) 299, 1611
HinfI GANTC 8 cut(s) 140, 368, 609, 725, 813, 1262, 1454, 1736
HpaII CCGG 2 cut(s) 428, 1831
HphI GGTGA 5 cut(s) 20, 91, 247, 325, 1679
Hpy166II GTNNAC 3 cut(s) 494, 1067, 1231
Hpy188III TCNNGA 9 cut(s) 291, 365, 433, 810, 851, 1165, 1718, 1728, 1923
Hpy8I GTNNAC 3 cut(s) 494, 1067, 1231
HpyAV CCTTC 4 cut(s) 31, 468, 851, 1807
HpyCH4III ACNGT 7 cut(s) 109, 517, 1044, 1131, 1340, 1588, 1703
HpyCH4IV ACGT 2 cut(s) 83, 990
HpyF10VI GCNNNNNNNGC 3 cut(s) 629, 896, 1655
HpySE526I ACGT 2 cut(s) 83, 990
Hsp92II CATG 7 cut(s) 326, 397, 467, 740, 1211, 1499, 1926
HspAI GCGC 2 cut(s) 299, 1611
Kzo9I GATC 2 cut(s) 1724, 1894
LguI GCTCTTC 1 cut(s) 171
LmnI GCTCC 3 cut(s) 319, 505, 1522
Lsp1109I GCAGC 6 cut(s) 569, 596, 658, 924, 1620, 1775
LweI GCATC 4 cut(s) 619, 1102, 1183, 1790
MabI ACCWGGT 1 cut(s) 1534
MaeI CTAG 3 cut(s) 489, 900, 1305
MaeII ACGT 2 cut(s) 83, 990
MaeIII GTNAC 2 cut(s) 79, 1300
MalI GATC 2 cut(s) 1726, 1896
MboI GATC 2 cut(s) 1724, 1894
MboII GAAGA 9 cut(s) 59, 62, 89, 158, 161, 713, 893, 1733, 1822
MfeI CAATTG 2 cut(s) 973, 1579
MflI RGATCY 1 cut(s) 1724
MhlI GDGCHC 2 cut(s) 1418, 1888
MlsI TGGCCA 2 cut(s) 1410, 1676
MluCI AATT 9 cut(s) 27, 181, 670, 873, 973, 1076, 1201, 1579, 1871
MluNI TGGCCA 2 cut(s) 1410, 1676
MlyI GAGTC 4 cut(s) 134, 362, 807, 1463
MmeI TCCRAC 3 cut(s) 973, 1804, 1925
Mox20I TGGCCA 2 cut(s) 1410, 1676
MscI TGGCCA 2 cut(s) 1410, 1676
MseI TTAA 4 cut(s) 423, 512, 795, 1049
MslI CAYNNNNRTG 5 cut(s) 107, 573, 741, 1110, 1602
Msp20I TGGCCA 2 cut(s) 1410, 1676
MspI CCGG 2 cut(s) 428, 1831
MspR9I CCNGG 1 cut(s) 1536
MunI CAATTG 2 cut(s) 973, 1579
MvaI CCWGG 1 cut(s) 1536
MwoI GCNNNNNNNGC 3 cut(s) 629, 896, 1655
NdeI CATATG 1 cut(s) 1615
NdeII GATC 2 cut(s) 1724, 1894
NlaIII CATG 7 cut(s) 326, 397, 467, 740, 1211, 1499, 1926
NlaIV GGNNCC 2 cut(s) 406, 452
NmuCI GTSAC 2 cut(s) 79, 1300
NspI RCATGY 2 cut(s) 397, 467
OliI CACNNNNGTG 1 cut(s) 107
PaeI GCATGC 1 cut(s) 397
PagI TCATGA 1 cut(s) 1922
PaqCI CACCTGC 1 cut(s) 1655
PceI AGGCCT 1 cut(s) 1093
PciI ACATGT 1 cut(s) 463
PciSI GCTCTTC 1 cut(s) 171
PcsI WCGNNNNNNNCGW 1 cut(s) 1714
PfeI GAWTC 4 cut(s) 609, 725, 1262, 1736
PkrI GCNGC 9 cut(s) 409, 559, 586, 648, 914, 1549, 1610, 1765, 1854
PleI GAGTC 4 cut(s) 134, 362, 807, 1462
PpsI GAGTC 4 cut(s) 134, 362, 807, 1462
PscI ACATGT 1 cut(s) 463
PshAI GACNNNNGTC 1 cut(s) 1704
PsiI TTATAA 1 cut(s) 350
Psp124BI GAGCTC 1 cut(s) 1888
Psp1406I AACGTT 1 cut(s) 990
Psp6I CCWGG 1 cut(s) 1534
PspGI CCWGG 1 cut(s) 1534
PspN4I GGNNCC 2 cut(s) 406, 452
PspPI GGNCC 3 cut(s) 405, 978, 1277
PstNI CAGNNNCTG 1 cut(s) 1685
PsuI RGATCY 1 cut(s) 1724
RsaI GTAC 5 cut(s) 592, 757, 777, 1180, 1585
RsaNI GTAC 5 cut(s) 591, 756, 776, 1179, 1584
RseI CAYNNNNRTG 5 cut(s) 107, 573, 741, 1110, 1602
SacI GAGCTC 1 cut(s) 1888
SapI GCTCTTC 1 cut(s) 171
SaqAI TTAA 4 cut(s) 423, 512, 795, 1049
SatI GCNGC 9 cut(s) 408, 558, 585, 647, 913, 1548, 1609, 1764, 1853
Sau3AI GATC 2 cut(s) 1724, 1894
Sau96I GGNCC 3 cut(s) 405, 978, 1277
SchI GAGTC 4 cut(s) 134, 362, 807, 1463
ScrFI CCNGG 1 cut(s) 1536
SduI GDGCHC 2 cut(s) 1418, 1888
SexAI ACCWGGT 1 cut(s) 1534
SfaNI GCATC 4 cut(s) 619, 1102, 1183, 1790
SfcI CTRYAG 2 cut(s) 69, 1659
SmiMI CAYNNNNRTG 5 cut(s) 107, 573, 741, 1110, 1602
SmlI CTYRAG 2 cut(s) 363, 808
SmoI CTYRAG 2 cut(s) 363, 808
SpeI ACTAGT 1 cut(s) 1304
SphI GCATGC 1 cut(s) 397
Sse9I AATT 9 cut(s) 27, 181, 670, 873, 973, 1076, 1201, 1579, 1871
SseBI AGGCCT 1 cut(s) 1093
SsiI CCGC 5 cut(s) 20, 408, 1547, 1789, 1852
SspMI CTAG 3 cut(s) 489, 900, 1305
SstI GAGCTC 1 cut(s) 1888
StuI AGGCCT 1 cut(s) 1093
StyD4I CCNGG 1 cut(s) 1534
StyI CCWWGG 1 cut(s) 1273
TaaI ACNGT 7 cut(s) 109, 517, 1044, 1131, 1340, 1588, 1703
TaiI ACGT 2 cut(s) 86, 993
TaqI TCGA 1 cut(s) 284
TasI AATT 9 cut(s) 27, 181, 670, 873, 973, 1076, 1201, 1579, 1871
TatI WGTACW 2 cut(s) 1178, 1583
TauI GCSGC 3 cut(s) 410, 1550, 1855
TfiI GAWTC 4 cut(s) 609, 725, 1262, 1736
Tru1I TTAA 4 cut(s) 423, 512, 795, 1049
Tru9I TTAA 4 cut(s) 423, 512, 795, 1049
TscAI CASTG 6 cut(s) 112, 166, 667, 1104, 1636, 1708
TseFI GTSAC 2 cut(s) 79, 1300
TseI GCWGC 6 cut(s) 557, 584, 646, 912, 1608, 1763
Tsp45I GTSAC 2 cut(s) 79, 1300
TspDTI ATGAA 6 cut(s) 738, 801, 870, 1037, 1254, 1911
TspRI CASTG 6 cut(s) 112, 166, 667, 1104, 1636, 1708
XapI RAATTY 1 cut(s) 873
XceI RCATGY 2 cut(s) 397, 467
XspI CTAG 3 cut(s) 489, 900, 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.