Rmu_sc0004927.1_g000023

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004927.1
Physical Location & Seq
Reverse (-)
107272 .. 109358
2087 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004927.1_g000023.1.cds

Sequence Viewer

Length: 1947 bp
atgattgtcgtttctaactctgggaatatagggattatcacatgccaatactactcatcaaagcagcttcagttccttctccttctcttctttctgctaaccaattctgcaacaccattgactttcaacatctctagttttccggccacggataacaccatatctctagagggcaatgctaacatcgacggccaagccctcctgctcactgaaacagaatacagcgccggccgagccagctaccaccaatccttcctcctccgggaaaatactaccagaaagcttgccgacttcactacgagtttcacattcgttatcgacactctaggcaacaactcctactatgctgacggcctcgccttcttcctagcgccagagggatccttactcaacttcacagtaggaagcgtcattggcttccctgtggataatccgcaggagaagccgtcgtcgagtcctcagtacccttttgtggctgtggagttcgatatctttcggaattatgagacatctgtacaggacccggctggcgatcacgttgggattgatgtcaactctgtcaagtctttgataaccaagccctggaatggtagcgttgtggatgcaatgatcaataatgctagtattagctatgattctggatcgaaaaatcttagcattgccttcactagttatgtgaatggtagtaaagtgatgaggtatcttgcttacaaggtggatctggaacaatacttgccggagagagtgattgttgggttctctgcagcaacgggtctacagattgtgtcaagtgttggtggaagtctaattttaattggtgccttggctctgatttggttcctctttagaaagaagactgaaaccggagaaagtagtgatgaagatccaattgtacttgatgactctgttcataacgaattcgagaagggaacaggcccaaggaagttttcctacaatgaattggcccaagcgacgaataattttgaaaagggagagaagcttggagagggaggctttggtggtgtttatagaggcttcattaaatacttgaactcacatgttgctgtcaagaagattgccagaggctctaaacaagggctgaaggagtatgcagcagaaataaggatcatcagtcggcttagacatcgaaatctggtacaactaataggttggtgtcatgaaaagagacttctacttgtgtacgagttgatgccaaatggcagcttggattctcatttgttcaaagacgaaaacttgttaatttgggaggtaagatacaaaattgctcaaggtttagcctctggtttatattatctacacgaagaatgggaacaatgtgtgctgcatagggatatcaaatccagcaatgttatgttggactcaaatttcaacgccaaacttggagatttcgggttagctcgacttgtggaccacggaaaactgtcgcaaaccaccattgtggctggaactaggggatacatggctttggagtatgttacaacaggaaaggctagcaagcaatcagatgtctacagctttggagttgttgctctagaaatagcatgtgggagaaaacccatcgatctgaatttggaaaacagtcaagttgaaatggtggagtgggtttggggactttatggtgaagggaaaatcattgaagcagctgatccaaagctctgtggagattttgatgagaaacaaatggagtgtttgatgatggttggattgtggtgtgctcatccggattacaatatgaggccttcaatgcaacaagcaattcaagtccttagctataaagttgcatggcctgttctcccattagagatgccgatggccacttttccacaaaatactcgccaaatgttgtctactaataatactggttcggaaggaagcaaaactgagtccagctattatggtggttatagcagctattcctcacaatag

Protein Analysis

648

Amino Acids

71.93

Weight (kDa)

5.4

Isoelectric Point (pI)

28.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 818
AccB7I CCANNNNNTGG 1 cut(s) 582
AccI GTMKAC 3 cut(s) 775, 1530, 1868
AccIII TCCGGA 1 cut(s) 1741
AciI CCGC 1 cut(s) 434
AclWI GGATC 7 cut(s) 375, 388, 649, 726, 878, 1133, 1661
AcoI YGGCCR 4 cut(s) 144, 190, 229, 1833
AcsI RAATTY 3 cut(s) 917, 1384, 1588
AcuI CTGAAG 2 cut(s) 53, 1121
AfaI GTAC 5 cut(s) 464, 516, 894, 1158, 1202
AfiI CCNNNNNNNGG 4 cut(s) 262, 472, 582, 587
AflIII ACRYGT 1 cut(s) 1057
AgsI TTSAA 9 cut(s) 127, 986, 1051, 1243, 1390, 1610, 1658, 1764, 1781
AhlI ACTAGT 1 cut(s) 668
AjnI CCWGG 1 cut(s) 581
AjuI GAANNNNNNNTTGG 2 cut(s) 931, 963
AleI CACNNNNGTG 1 cut(s) 1457
Alw21I GWGCWC 1 cut(s) 1738
Alw26I GTCTC 2 cut(s) 500, 1180
AlwI GGATC 7 cut(s) 375, 388, 649, 726, 878, 1133, 1661
Aor13HI TCCGGA 1 cut(s) 1741
AoxI GGCC 9 cut(s) 144, 190, 229, 352, 934, 963, 1757, 1805, 1833
ApeKI GCWGC 7 cut(s) 64, 764, 1112, 1221, 1342, 1661, 1929
ApoI RAATTY 3 cut(s) 917, 1384, 1588
AspLEI GCGC 2 cut(s) 227, 373
AspS9I GGNCC 4 cut(s) 520, 935, 964, 1429
AsuC2I CCSGG 2 cut(s) 263, 524
AsuHPI GGTGA 1 cut(s) 1652
AsuNHI GCTAGC 1 cut(s) 1511
AvaII GGWCC 2 cut(s) 520, 1429
BalI TGGCCA 1 cut(s) 1835
BamHI GGATCC 1 cut(s) 380
BanI GGYRCC 1 cut(s) 818
BarI GAAGNNNNNNTAC 2 cut(s) 935, 967
BbsI GAAGAC 1 cut(s) 860
Bbv12I GWGCWC 1 cut(s) 1738
BbvI GCAGC 7 cut(s) 76, 776, 1124, 1233, 1329, 1673, 1941
BccI CCATC 3 cut(s) 1586, 1711, 1825
BceAI ACGGC 3 cut(s) 205, 367, 430
BciT130I CCWGG 1 cut(s) 583
BciVI GTATCC 1 cut(s) 1469
BclI TGATCA 1 cut(s) 609
BcnI CCSGG 2 cut(s) 263, 524
BcoDI GTCTC 2 cut(s) 500, 1180
BcuI ACTAGT 1 cut(s) 668
BfaI CTAG 9 cut(s) 135, 167, 326, 368, 621, 669, 1470, 1512, 1553
BfmI CTRYAG 3 cut(s) 762, 776, 1531
BfoI RGCGCY 2 cut(s) 228, 374
BfuI GTATCC 1 cut(s) 1469
BisI GCNGC 7 cut(s) 65, 765, 1113, 1222, 1343, 1662, 1930
BlsI GCNGC 7 cut(s) 66, 766, 1114, 1223, 1344, 1663, 1931
Bme1390I CCNGG 3 cut(s) 263, 524, 583
Bme18I GGWCC 2 cut(s) 520, 1429
BmgT120I GGNCC 4 cut(s) 520, 935, 964, 1429
BmiI GGNNCC 4 cut(s) 382, 522, 820, 839
BmrFI CCNGG 3 cut(s) 263, 524, 583
BmsI GCATC 3 cut(s) 592, 1200, 1815
BmtI GCTAGC 1 cut(s) 1515
BpiI GAAGAC 1 cut(s) 860
Bpu10I CCTNAGC 1 cut(s) 1787
BpuEI CTTGAG 1 cut(s) 1272
BpuMI CCSGG 2 cut(s) 263, 524
Bsa29I ATCGAT 1 cut(s) 1581
BsaBI GATNNNNATC 1 cut(s) 882
BsaJI CCNNGG 5 cut(s) 147, 581, 822, 938, 1432
BsaWI WCCGGW 2 cut(s) 863, 1741
BsaXI ACNNNNNCTCC 2 cut(s) 431, 461
Bsc4I CCNNNNNNNGG 4 cut(s) 262, 472, 582, 587
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 1 cut(s) 1885
Bse3DI GCAATG 4 cut(s) 181, 612, 657, 1372
Bse8I GATNNNNATC 1 cut(s) 882
BseAI TCCGGA 1 cut(s) 1741
BseBI CCWGG 1 cut(s) 583
BseCI ATCGAT 1 cut(s) 1581
BseDI CCNNGG 5 cut(s) 147, 581, 822, 938, 1432
BseGI GGATG 2 cut(s) 607, 1738
BseJI GATNNNNATC 1 cut(s) 882
BseLI CCNNNNNNNGG 4 cut(s) 262, 472, 582, 587
BseMI GCAATG 4 cut(s) 181, 612, 657, 1372
BseMII CTCAG 2 cut(s) 473, 1893
BseNI ACTGG 1 cut(s) 1885
BseRI GAGGAG 1 cut(s) 248
BseX3I CGGCCG 1 cut(s) 229
BseXI GCAGC 7 cut(s) 76, 776, 1124, 1233, 1329, 1673, 1941
Bsh1285I CGRYCG 1 cut(s) 232
BshFI GGCC 9 cut(s) 146, 192, 231, 354, 936, 965, 1759, 1807, 1835
BshNI GGYRCC 1 cut(s) 818
BshVI ATCGAT 1 cut(s) 1581
BsiEI CGRYCG 1 cut(s) 232
BsiHKAI GWGCWC 1 cut(s) 1738
BsiSI CCGG 7 cut(s) 143, 228, 262, 524, 737, 864, 1742
BslFI GGGAC 1 cut(s) 1644
BslI CCNNNNNNNGG 4 cut(s) 262, 472, 582, 587
BsmAI GTCTC 2 cut(s) 500, 1180
BsmFI GGGAC 1 cut(s) 1644
BsnI GGCC 9 cut(s) 146, 192, 231, 354, 936, 965, 1759, 1807, 1835
Bsp1286I GDGCHC 1 cut(s) 1738
Bsp13I TCCGGA 1 cut(s) 1741
Bsp1407I TGTACA 1 cut(s) 514
Bsp143I GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
BspACI CCGC 1 cut(s) 434
BspANI GGCC 9 cut(s) 146, 192, 231, 354, 936, 965, 1759, 1807, 1835
BspCNI CTCAG 2 cut(s) 472, 1894
BspDI ATCGAT 1 cut(s) 1581
BspEI TCCGGA 1 cut(s) 1741
BspHI TCATGA 1 cut(s) 1177
BspLI GGNNCC 4 cut(s) 382, 522, 820, 839
BspMAI CTGCAG 1 cut(s) 766
BspOI GCTAGC 1 cut(s) 1515
BspPI GGATC 7 cut(s) 375, 388, 649, 726, 878, 1133, 1661
BspT107I GGYRCC 1 cut(s) 818
BsrDI GCAATG 4 cut(s) 181, 612, 657, 1372
BsrFI RCCGGY 1 cut(s) 227
BsrGI TGTACA 1 cut(s) 514
BsrI ACTGG 1 cut(s) 1885
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 5 cut(s) 147, 581, 822, 938, 1432
BssMI GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
BssT1I CCWWGG 2 cut(s) 822, 938
Bst2UI CCWGG 1 cut(s) 583
Bst4CI ACNGT 3 cut(s) 400, 1443, 1601
Bst6I CTCTTC 1 cut(s) 92
BstAUI TGTACA 1 cut(s) 514
BstC8I GCNNGC 6 cut(s) 229, 238, 285, 529, 1513, 1517
BstDEI CTNAG 5 cut(s) 459, 653, 1139, 1787, 1902
BstDSI CCRYGG 2 cut(s) 147, 1432
BstF5I GGATG 2 cut(s) 607, 1738
BstH2I RGCGCY 2 cut(s) 228, 374
BstHHI GCGC 2 cut(s) 227, 373
BstKTI GATC 9 cut(s) 383, 535, 612, 644, 721, 886, 1128, 1585, 1669
BstMAI GTCTC 2 cut(s) 500, 1180
BstMBI GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
BstMCI CGRYCG 1 cut(s) 232
BstMWI GCNNNNNNNGC 5 cut(s) 233, 237, 414, 442, 1765
BstNI CCWGG 1 cut(s) 583
BstNSI RCATGY 3 cut(s) 45, 1061, 1566
BstSCI CCNGG 3 cut(s) 261, 522, 581
BstSFI CTRYAG 3 cut(s) 762, 776, 1531
BstV1I GCAGC 7 cut(s) 76, 776, 1124, 1233, 1329, 1673, 1941
BstV2I GAAGAC 1 cut(s) 860
BstX2I RGATCY 3 cut(s) 380, 718, 883
BstXI CCANNNNNNTGG 1 cut(s) 1459
BstYI RGATCY 3 cut(s) 380, 718, 883
BstZI CGGCCG 1 cut(s) 229
Bsu15I ATCGAT 1 cut(s) 1581
BsuI GTATCC 1 cut(s) 1469
BsuRI GGCC 9 cut(s) 146, 192, 231, 354, 936, 965, 1759, 1807, 1835
BsuTUI ATCGAT 1 cut(s) 1581
BtgI CCRYGG 2 cut(s) 147, 1432
BtsCI GGATG 2 cut(s) 607, 1738
BtsIMutI CAGTG 1 cut(s) 207
Cac8I GCNNGC 6 cut(s) 229, 238, 285, 529, 1513, 1517
CciI TCATGA 1 cut(s) 1177
CfoI GCGC 2 cut(s) 227, 373
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 4 cut(s) 520, 935, 964, 1429
ClaI ATCGAT 1 cut(s) 1581
CseI GACGC 1 cut(s) 397
Csp6I GTAC 5 cut(s) 463, 515, 893, 1157, 1201
CviAII CATG 6 cut(s) 42, 1058, 1178, 1480, 1563, 1803
CviQI GTAC 5 cut(s) 463, 515, 893, 1157, 1201
DdeI CTNAG 5 cut(s) 459, 653, 1139, 1787, 1902
DpnI GATC 9 cut(s) 382, 534, 611, 643, 720, 885, 1127, 1584, 1668
DpnII GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
EaeI YGGCCR 4 cut(s) 144, 190, 229, 1833
EagI CGGCCG 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 92
EarI CTCTTC 1 cut(s) 92
EclXI CGGCCG 1 cut(s) 229
Eco130I CCWWGG 2 cut(s) 822, 938
Eco147I AGGCCT 1 cut(s) 1759
Eco32I GATATC 2 cut(s) 490, 1354
Eco47I GGWCC 2 cut(s) 520, 1429
Eco52I CGGCCG 1 cut(s) 229
Eco57I CTGAAG 2 cut(s) 53, 1121
EcoO109I RGGNCCY 1 cut(s) 520
EcoRI GAATTC 1 cut(s) 917
EcoRII CCWGG 1 cut(s) 581
EcoRV GATATC 2 cut(s) 490, 1354
EcoT14I CCWWGG 2 cut(s) 822, 938
ErhI CCWWGG 2 cut(s) 822, 938
FaeI CATG 6 cut(s) 45, 1061, 1181, 1483, 1566, 1806
FaqI GGGAC 1 cut(s) 1644
FatI CATG 6 cut(s) 41, 1057, 1177, 1479, 1562, 1802
FbaI TGATCA 1 cut(s) 609
FblI GTMKAC 3 cut(s) 775, 1530, 1868
Fnu4HI GCNGC 7 cut(s) 65, 765, 1113, 1222, 1343, 1662, 1930
FokI GGATG 2 cut(s) 614, 1725
Fsp4HI GCNGC 7 cut(s) 65, 765, 1113, 1222, 1343, 1662, 1930
FspBI CTAG 9 cut(s) 135, 167, 326, 368, 621, 669, 1470, 1512, 1553
GlaI GCGC 2 cut(s) 226, 372
GluI GCNGC 7 cut(s) 65, 765, 1113, 1222, 1343, 1662, 1930
HaeII RGCGCY 2 cut(s) 228, 374
HaeIII GGCC 9 cut(s) 146, 192, 231, 354, 936, 965, 1759, 1807, 1835
HapII CCGG 7 cut(s) 143, 228, 262, 524, 737, 864, 1742
HgaI GACGC 1 cut(s) 397
HhaI GCGC 2 cut(s) 227, 373
Hin1II CATG 6 cut(s) 45, 1061, 1181, 1483, 1566, 1806
Hin6I GCGC 2 cut(s) 225, 371
HinP1I GCGC 2 cut(s) 225, 371
HincII GTYRAC 1 cut(s) 553
HindII GTYRAC 1 cut(s) 553
HindIII AAGCTT 2 cut(s) 281, 998
HinfI GANTC 6 cut(s) 454, 635, 902, 1229, 1379, 1904
HpaII CCGG 7 cut(s) 143, 228, 262, 524, 737, 864, 1742
HphI GGTGA 1 cut(s) 1652
Hpy166II GTNNAC 6 cut(s) 553, 776, 1201, 1429, 1531, 1869
Hpy188I TCNGA 5 cut(s) 498, 831, 1525, 1587, 1888
Hpy188III TCNNGA 8 cut(s) 167, 639, 722, 922, 1069, 1178, 1553, 1742
Hpy8I GTNNAC 6 cut(s) 553, 776, 1201, 1429, 1531, 1869
Hpy99I CGWCG 4 cut(s) 191, 451, 454, 976
HpyCH4III ACNGT 3 cut(s) 400, 1443, 1601
HpyCH4IV ACGT 1 cut(s) 537
HpyCH4V TGCA 7 cut(s) 110, 605, 764, 1112, 1345, 1768, 1802
HpyF10VI GCNNNNNNNGC 5 cut(s) 233, 237, 414, 442, 1765
HpyF3I CTNAG 5 cut(s) 459, 653, 1139, 1787, 1902
HpySE526I ACGT 1 cut(s) 537
Hsp92II CATG 6 cut(s) 45, 1061, 1181, 1483, 1566, 1806
HspAI GCGC 2 cut(s) 225, 371
Kpn2I TCCGGA 1 cut(s) 1741
KroI GCCGGC 1 cut(s) 227
KroNI GCCGGC 1 cut(s) 229
Ksp22I TGATCA 1 cut(s) 609
Kzo9I GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
Lsp1109I GCAGC 7 cut(s) 76, 776, 1124, 1233, 1329, 1673, 1941
LweI GCATC 3 cut(s) 592, 1200, 1815
MaeI CTAG 9 cut(s) 135, 167, 326, 368, 621, 669, 1470, 1512, 1553
MaeII ACGT 1 cut(s) 537
MaeIII GTNAC 1 cut(s) 1495
MalI GATC 9 cut(s) 382, 534, 611, 643, 720, 885, 1127, 1584, 1668
MboI GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
MboII GAAGA 6 cut(s) 79, 355, 865, 893, 1084, 1334
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 3 cut(s) 380, 718, 883
MhlI GDGCHC 1 cut(s) 1738
MlsI TGGCCA 1 cut(s) 1835
MluNI TGGCCA 1 cut(s) 1835
MlyI GAGTC 4 cut(s) 463, 896, 1373, 1913
MmeI TCCRAC 2 cut(s) 1356, 1702
Mox20I TGGCCA 1 cut(s) 1835
MroI TCCGGA 1 cut(s) 1741
MroNI GCCGGC 1 cut(s) 227
MscI TGGCCA 1 cut(s) 1835
MseI TTAA 3 cut(s) 812, 1041, 1259
MslI CAYNNNNRTG 1 cut(s) 1457
Msp20I TGGCCA 1 cut(s) 1835
MspA1I CMGCKG 1 cut(s) 1664
MspI CCGG 7 cut(s) 143, 228, 262, 524, 737, 864, 1742
MspR9I CCNGG 3 cut(s) 263, 524, 583
MunI CAATTG 1 cut(s) 888
MvaI CCWGG 1 cut(s) 583
MwoI GCNNNNNNNGC 5 cut(s) 233, 237, 414, 442, 1765
NaeI GCCGGC 1 cut(s) 229
NciI CCSGG 2 cut(s) 263, 524
NdeII GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
NgoMIV GCCGGC 1 cut(s) 227
NheI GCTAGC 1 cut(s) 1511
NlaIII CATG 6 cut(s) 45, 1061, 1181, 1483, 1566, 1806
NlaIV GGNNCC 4 cut(s) 382, 522, 820, 839
NmeAIII GCCGAG 1 cut(s) 257
NspI RCATGY 3 cut(s) 45, 1061, 1566
OliI CACNNNNGTG 1 cut(s) 1457
PagI TCATGA 1 cut(s) 1177
PceI AGGCCT 1 cut(s) 1759
PciI ACATGT 1 cut(s) 1057
PdiI GCCGGC 1 cut(s) 229
PfeI GAWTC 2 cut(s) 635, 1229
PflMI CCANNNNNTGG 1 cut(s) 582
PfoI TCCNGGA 1 cut(s) 261
PkrI GCNGC 7 cut(s) 66, 766, 1114, 1223, 1344, 1663, 1931
PleI GAGTC 4 cut(s) 462, 896, 1373, 1912
PpsI GAGTC 4 cut(s) 462, 896, 1373, 1912
PpuMI RGGWCCY 1 cut(s) 520
PscI ACATGT 1 cut(s) 1057
Psp5II RGGWCCY 1 cut(s) 520
Psp6I CCWGG 1 cut(s) 581
PspGI CCWGG 1 cut(s) 581
PspN4I GGNNCC 4 cut(s) 382, 522, 820, 839
PspPI GGNCC 4 cut(s) 520, 935, 964, 1429
PspPPI RGGWCCY 1 cut(s) 520
PstI CTGCAG 1 cut(s) 766
PsuI RGATCY 3 cut(s) 380, 718, 883
PvuII CAGCTG 1 cut(s) 1664
RsaI GTAC 5 cut(s) 464, 516, 894, 1158, 1202
RsaNI GTAC 5 cut(s) 463, 515, 893, 1157, 1201
RseI CAYNNNNRTG 1 cut(s) 1457
SaqAI TTAA 3 cut(s) 812, 1041, 1259
SatI GCNGC 7 cut(s) 65, 765, 1113, 1222, 1343, 1662, 1930
Sau3AI GATC 9 cut(s) 380, 532, 609, 641, 718, 883, 1125, 1582, 1666
Sau96I GGNCC 4 cut(s) 520, 935, 964, 1429
SchI GAGTC 4 cut(s) 463, 896, 1373, 1913
ScrFI CCNGG 3 cut(s) 263, 524, 583
SduI GDGCHC 1 cut(s) 1738
SfaNI GCATC 3 cut(s) 592, 1200, 1815
SfcI CTRYAG 3 cut(s) 762, 776, 1531
SinI GGWCC 2 cut(s) 520, 1429
SmiMI CAYNNNNRTG 1 cut(s) 1457
SmlI CTYRAG 1 cut(s) 1287
SmoI CTYRAG 1 cut(s) 1287
SpeI ACTAGT 1 cut(s) 668
SseBI AGGCCT 1 cut(s) 1759
SsiI CCGC 1 cut(s) 434
SspMI CTAG 9 cut(s) 135, 167, 326, 368, 621, 669, 1470, 1512, 1553
StuI AGGCCT 1 cut(s) 1759
StyD4I CCNGG 3 cut(s) 261, 522, 581
StyI CCWWGG 2 cut(s) 822, 938
TaaI ACNGT 3 cut(s) 400, 1443, 1601
TaiI ACGT 1 cut(s) 540
TaqI TCGA 9 cut(s) 186, 318, 452, 486, 644, 921, 1147, 1420, 1581
TatI WGTACW 2 cut(s) 514, 892
TfiI GAWTC 2 cut(s) 635, 1229
Tru1I TTAA 3 cut(s) 812, 1041, 1259
Tru9I TTAA 3 cut(s) 812, 1041, 1259
TscAI CASTG 1 cut(s) 214
TseI GCWGC 7 cut(s) 64, 764, 1112, 1221, 1342, 1661, 1929
TspDTI ATGAA 5 cut(s) 894, 899, 972, 1027, 1194
TspGWI ACGGA 2 cut(s) 164, 1449
TspRI CASTG 1 cut(s) 214
Van91I CCANNNNNTGG 1 cut(s) 582
VpaK11BI GGWCC 2 cut(s) 520, 1429
XapI RAATTY 3 cut(s) 917, 1384, 1588
XbaI TCTAGA 2 cut(s) 166, 1552
XceI RCATGY 3 cut(s) 45, 1061, 1566
XmiI GTMKAC 3 cut(s) 775, 1530, 1868
XspI CTAG 9 cut(s) 135, 167, 326, 368, 621, 669, 1470, 1512, 1553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.