RchiOBHm_Chr1g0365581

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
56453419 .. 56456416
2998 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59020

Sequence Viewer

Length: 1323 bp
ATGCCAGGTTTGGCTATAGAGACATCAAAAAAAAATTTTGGCCTTCGCCCAAAAAGATTGCCCACCCCATTTTGGAATCCTGGCTACGTCCCTGAAGAGGAGGACTTTGACTTGGCGATTTGTAATGGAGTAAGCAGAAGGAGCGTCAAACTTGTTGAAGTGATTGACCAACTCTACACAAGCCTTTTAGCATACCGTGCTGGACAAGGGACGTATGTGGAACCTTTGATCATGCCGAGCTCATTTCCAGACTCCGGTGCCCCTTTAGCTTTACTAGATGATTACGACACACTAATGAGTGTATCGGAAGGAGTGGTTTTCACTCTCTGGTGTTTACAATTCAACAAAATCACTACTTTTGTAGTGTCCCAATTCCAAATTGTAACAGTTGAGTTTGGTATGACTTTCTCCAACAAGGGCCGGAATCCACCAGAGCCCCACATTGGGATAGATATAAATACACTCTCATCGAATACTGGGAATCTCAGCAAGTTGTGGATAACTTGCAATGCTACTGGTGACAACGTCAGACTTGCCTTCTGGACATACGAGGAACTCCAGGTTTTTGTGGGTAAATCATCTCTTTCTTATCATATGGACTTGAAACAGGCTCTTCCCCAGCAAGTTAAAATTGGTTTTTCAGCTAGTACAGGAATGCCCCCCGAGGGACATGTTATAAATGATTGGGAACTCAATTCAACTTTGGTTTCTGATAAATGTACTAAAAATAATGAGAGACATACCATGGTTATAGCCATCTTTGCAGCTTCTTTCTCCGTTTTGATACTTGCTGTGGCCATTTGTTTGATGGTGCTAAGGAAACCAATGAACAGGACCGTTGGACATGGAAGTTACACCAGAAATGTGTCATCCATAAATACAGATCTTGAGAGACTGATCTGGCCAAGAAGATTTGCTTATGAAGAACTAGCTGCAGCCACAAATGGCTTTGCAAACGAAACAAGGCTAGGCCAAGGAGGGACGGGACAAGTTTACAAAGGAGTCATACACCATCTAGGCTGCGACGTTGCTATCAAGAGAATTTTTGCACAATTCGAACATAAGCACTATGAAAAAATCTTCATCAATGAAGTCAAAATCATTAGCCGCTTAATACATAGAAACGTGGTGCAATTCATTGGATGGTGTCACGAGCAAGACGAATGTTTACTTGTTTATGCATTCATGCCGAACAACAGTCTTGACACCCATTTATTTGGCTGTGGAGAAGCTTTGCCGTGGGATTTTAGGTACAAAATAGCTTTAGGCTTGGCCTCTGCCCTTCATTATCTACATGAAGATGCAGGACAGTGTGCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

440

Amino Acids

49.28

Weight (kDa)

6.28

Isoelectric Point (pI)

42.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 122 - 242 9.1e-17 Legume lectin domain
Pkinase PF00069 318 - 433 2.3e-17 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 320 - 433 1.6e-17 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 677
AccB1I GGYRCC 1 cut(s) 257
AciI CCGC 1 cut(s) 1108
AcoI YGGCCR 2 cut(s) 795, 902
AcsI RAATTY 2 cut(s) 34, 1041
AcuI CTGAAG 1 cut(s) 114
AfaI GTAC 3 cut(s) 649, 721, 1253
AfiI CCNNNNNNNGG 6 cut(s) 72, 97, 254, 443, 444, 665
AflIII ACRYGT 1 cut(s) 670
AgsI TTSAA 4 cut(s) 158, 343, 604, 699
AjnI CCWGG 3 cut(s) 4, 79, 558
AluBI AGCT 7 cut(s) 240, 269, 644, 767, 932, 1232, 1262
AluI AGCT 7 cut(s) 240, 269, 644, 767, 932, 1232, 1262
Alw21I GWGCWC 1 cut(s) 242
Alw26I GTCTC 3 cut(s) 14, 730, 886
Ama87I CYCGRG 1 cut(s) 662
AoxI GGCC 6 cut(s) 40, 418, 795, 902, 970, 1272
ApeKI GCWGC 4 cut(s) 764, 932, 935, 1020
ApoI RAATTY 2 cut(s) 34, 1041
AspS9I GGNCC 2 cut(s) 418, 834
AsuHPI GGTGA 1 cut(s) 530
AsuII TTCGAA 1 cut(s) 1056
AvaI CYCGRG 1 cut(s) 662
AvaII GGWCC 1 cut(s) 834
BaeGI GKGCMC 1 cut(s) 262
BalI TGGCCA 2 cut(s) 797, 904
BanI GGYRCC 1 cut(s) 257
BanII GRGCYC 2 cut(s) 242, 438
BauI CACGAG 1 cut(s) 1151
Bbv12I GWGCWC 1 cut(s) 242
BbvI GCAGC 4 cut(s) 776, 919, 947, 1007
BccI CCATC 4 cut(s) 764, 802, 1020, 1137
BceAI ACGGC 1 cut(s) 1222
BciT130I CCWGG 3 cut(s) 6, 81, 560
BclI TGATCA 1 cut(s) 228
BcoDI GTCTC 3 cut(s) 14, 730, 886
BfaI CTAG 5 cut(s) 275, 645, 929, 968, 1016
BfmI CTRYAG 2 cut(s) 15, 933
BglII AGATCT 1 cut(s) 883
BisI GCNGC 5 cut(s) 765, 933, 936, 1021, 1108
BlsI GCNGC 5 cut(s) 766, 934, 937, 1022, 1109
Bme1390I CCNGG 3 cut(s) 6, 81, 560
Bme18I GGWCC 1 cut(s) 834
BmeT110I CYCGRG 1 cut(s) 662
BmgT120I GGNCC 2 cut(s) 418, 834
BmiI GGNNCC 2 cut(s) 222, 259
BmrFI CCNGG 3 cut(s) 6, 81, 560
BmrI ACTGGG 1 cut(s) 486
BmsI GCATC 1 cut(s) 1291
BmuI ACTGGG 1 cut(s) 486
BpmI CTGGAG 1 cut(s) 542
Bpu10I CCTNAGC 1 cut(s) 815
Bpu14I TTCGAA 1 cut(s) 1056
BpuEI CTTGAG 1 cut(s) 908
BsaJI CCNNGG 4 cut(s) 663, 744, 973, 1238
BsaWI WCCGGW 1 cut(s) 254
Bsc4I CCNNNNNNNGG 6 cut(s) 72, 97, 254, 443, 444, 665
Bse1I ACTGG 2 cut(s) 481, 520
Bse3DI GCAATG 1 cut(s) 514
BseBI CCWGG 3 cut(s) 6, 81, 560
BseDI CCNNGG 4 cut(s) 663, 744, 973, 1238
BseGI GGATG 2 cut(s) 869, 1148
BseLI CCNNNNNNNGG 6 cut(s) 72, 97, 254, 443, 444, 665
BseMI GCAATG 1 cut(s) 514
BseMII CTCAG 1 cut(s) 499
BseNI ACTGG 2 cut(s) 481, 520
BseRI GAGGAG 1 cut(s) 113
BseSI GKGCMC 1 cut(s) 262
BseXI GCAGC 4 cut(s) 776, 919, 947, 1007
BseYI CCCAGC 1 cut(s) 618
BshFI GGCC 6 cut(s) 42, 420, 797, 904, 972, 1274
BshNI GGYRCC 1 cut(s) 257
BsiHKAI GWGCWC 1 cut(s) 242
BsiHKCI CYCGRG 1 cut(s) 662
BsiSI CCGG 2 cut(s) 255, 421
BslFI GGGAC 6 cut(s) 74, 223, 352, 681, 994, 999
BslI CCNNNNNNNGG 6 cut(s) 72, 97, 254, 443, 444, 665
BsmAI GTCTC 3 cut(s) 14, 730, 886
BsmFI GGGAC 6 cut(s) 74, 223, 352, 681, 994, 999
BsmI GAATGC 2 cut(s) 660, 1181
BsnI GGCC 6 cut(s) 42, 420, 797, 904, 972, 1274
BsoBI CYCGRG 1 cut(s) 662
Bsp119I TTCGAA 1 cut(s) 1056
Bsp1286I GDGCHC 3 cut(s) 242, 262, 438
Bsp143I GATC 3 cut(s) 228, 883, 897
Bsp19I CCATGG 1 cut(s) 744
BspACI CCGC 1 cut(s) 1108
BspANI GGCC 6 cut(s) 42, 420, 797, 904, 972, 1274
BspCNI CTCAG 1 cut(s) 498
BspLI GGNNCC 2 cut(s) 222, 259
BspMAI CTGCAG 1 cut(s) 937
BspQI GCTCTTC 1 cut(s) 618
BspT104I TTCGAA 1 cut(s) 1056
BspT107I GGYRCC 1 cut(s) 257
BsrDI GCAATG 1 cut(s) 514
BsrI ACTGG 2 cut(s) 481, 520
BssECI CCNNGG 4 cut(s) 663, 744, 973, 1238
BssMI GATC 3 cut(s) 228, 883, 897
BssSI CACGAG 1 cut(s) 1151
BssT1I CCWWGG 2 cut(s) 744, 973
Bst2BI CACGAG 1 cut(s) 1151
Bst2UI CCWGG 3 cut(s) 6, 81, 560
Bst4CI ACNGT 5 cut(s) 197, 388, 838, 1199, 1311
Bst6I CTCTTC 2 cut(s) 90, 618
BstAPI GCANNNNNTGC 1 cut(s) 197
BstBI TTCGAA 1 cut(s) 1056
BstDEI CTNAG 2 cut(s) 485, 815
BstDSI CCRYGG 2 cut(s) 744, 1238
BstF5I GGATG 2 cut(s) 869, 1148
BstKTI GATC 3 cut(s) 231, 886, 900
BstMAI GTCTC 3 cut(s) 14, 730, 886
BstMBI GATC 3 cut(s) 228, 883, 897
BstMWI GCNNNNNNNGC 4 cut(s) 141, 197, 266, 761
BstNI CCWGG 3 cut(s) 6, 81, 560
BstNSI RCATGY 1 cut(s) 674
BstSCI CCNGG 3 cut(s) 4, 79, 558
BstSFI CTRYAG 2 cut(s) 15, 933
BstSLI GKGCMC 1 cut(s) 262
BstV1I GCAGC 4 cut(s) 776, 919, 947, 1007
BstX2I RGATCY 1 cut(s) 883
BstXI CCANNNNNNTGG 1 cut(s) 1217
BstYI RGATCY 1 cut(s) 883
BsuRI GGCC 6 cut(s) 42, 420, 797, 904, 972, 1274
BtgI CCRYGG 2 cut(s) 744, 1238
BtsCI GGATG 2 cut(s) 869, 1148
BtsIMutI CAGTG 1 cut(s) 1316
Cfr13I GGNCC 2 cut(s) 418, 834
CseI GACGC 1 cut(s) 133
Csp6I GTAC 3 cut(s) 648, 720, 1252
CviAII CATG 6 cut(s) 232, 671, 745, 845, 1186, 1295
CviQI GTAC 3 cut(s) 648, 720, 1252
DdeI CTNAG 2 cut(s) 485, 815
DpnI GATC 3 cut(s) 230, 885, 899
DpnII GATC 3 cut(s) 228, 883, 897
EaeI YGGCCR 2 cut(s) 795, 902
Eam1104I CTCTTC 2 cut(s) 90, 618
EarI CTCTTC 2 cut(s) 90, 618
Ecl136II GAGCTC 1 cut(s) 240
Eco130I CCWWGG 2 cut(s) 744, 973
Eco24I GRGCYC 2 cut(s) 242, 438
Eco47I GGWCC 1 cut(s) 834
Eco53kI GAGCTC 1 cut(s) 240
Eco57I CTGAAG 1 cut(s) 114
Eco88I CYCGRG 1 cut(s) 662
EcoICRI GAGCTC 1 cut(s) 240
EcoRII CCWGG 3 cut(s) 4, 79, 558
EcoT14I CCWWGG 2 cut(s) 744, 973
EcoT22I ATGCAT 1 cut(s) 1183
EcoT38I GRGCYC 2 cut(s) 242, 438
ErhI CCWWGG 2 cut(s) 744, 973
FaeI CATG 6 cut(s) 235, 674, 748, 848, 1189, 1298
FalI AAGNNNNNCTT 2 cut(s) 901, 933
FaqI GGGAC 6 cut(s) 74, 223, 352, 681, 994, 999
FatI CATG 6 cut(s) 231, 670, 744, 844, 1185, 1294
FauNDI CATATG 1 cut(s) 594
FbaI TGATCA 1 cut(s) 228
Fnu4HI GCNGC 5 cut(s) 765, 933, 936, 1021, 1108
FokI GGATG 2 cut(s) 856, 1155
FriOI GRGCYC 2 cut(s) 242, 438
Fsp4HI GCNGC 5 cut(s) 765, 933, 936, 1021, 1108
FspBI CTAG 5 cut(s) 275, 645, 929, 968, 1016
GluI GCNGC 5 cut(s) 765, 933, 936, 1021, 1108
GsaI CCCAGC 1 cut(s) 622
GsuI CTGGAG 1 cut(s) 542
HaeIII GGCC 6 cut(s) 42, 420, 797, 904, 972, 1274
HapII CCGG 2 cut(s) 255, 421
HgaI GACGC 1 cut(s) 133
Hin1II CATG 6 cut(s) 235, 674, 748, 848, 1189, 1298
HindIII AAGCTT 1 cut(s) 1230
HinfI GANTC 5 cut(s) 76, 251, 424, 481, 1002
HpaII CCGG 2 cut(s) 255, 421
HphI GGTGA 1 cut(s) 530
Hpy166II GTNNAC 3 cut(s) 335, 994, 1169
Hpy188I TCNGA 3 cut(s) 307, 530, 712
Hpy188III TCNNGA 6 cut(s) 248, 541, 887, 1036, 1151, 1202
Hpy8I GTNNAC 3 cut(s) 335, 994, 1169
Hpy99I CGWCG 1 cut(s) 1028
HpyAV CCTTC 5 cut(s) 53, 132, 302, 547, 1292
HpyCH4III ACNGT 5 cut(s) 197, 388, 838, 1199, 1311
HpyCH4IV ACGT 5 cut(s) 87, 212, 525, 1026, 1125
HpyCH4V TGCA 8 cut(s) 507, 764, 935, 953, 1049, 1132, 1181, 1304
HpyF10VI GCNNNNNNNGC 4 cut(s) 141, 197, 266, 761
HpyF3I CTNAG 2 cut(s) 485, 815
HpySE526I ACGT 5 cut(s) 87, 212, 525, 1026, 1125
Hsp92II CATG 6 cut(s) 235, 674, 748, 848, 1189, 1298
Ksp22I TGATCA 1 cut(s) 228
Kzo9I GATC 3 cut(s) 228, 883, 897
LguI GCTCTTC 1 cut(s) 618
LmnI GCTCC 1 cut(s) 141
Lsp1109I GCAGC 4 cut(s) 776, 919, 947, 1007
LweI GCATC 1 cut(s) 1291
MaeI CTAG 5 cut(s) 275, 645, 929, 968, 1016
MaeII ACGT 5 cut(s) 87, 212, 525, 1026, 1125
MaeIII GTNAC 4 cut(s) 382, 518, 851, 1148
MalI GATC 3 cut(s) 230, 885, 899
MboI GATC 3 cut(s) 228, 883, 897
MboII GAAGA 6 cut(s) 107, 605, 921, 935, 1072, 1310
MflI RGATCY 1 cut(s) 883
MhlI GDGCHC 3 cut(s) 242, 262, 438
MlsI TGGCCA 2 cut(s) 797, 904
MluCI AATT 9 cut(s) 34, 338, 371, 378, 630, 694, 1041, 1052, 1133
MluNI TGGCCA 2 cut(s) 797, 904
MlyI GAGTC 2 cut(s) 245, 1011
MmeI TCCRAC 2 cut(s) 435, 820
MnlI CCTC 6 cut(s) 91, 94, 544, 658, 971, 1285
Mox20I TGGCCA 2 cut(s) 797, 904
Mph1103I ATGCAT 1 cut(s) 1183
MscI TGGCCA 2 cut(s) 797, 904
MseI TTAA 2 cut(s) 627, 1112
MslI CAYNNNNRTG 2 cut(s) 293, 1299
Msp20I TGGCCA 2 cut(s) 797, 904
MspI CCGG 2 cut(s) 255, 421
MspR9I CCNGG 3 cut(s) 6, 81, 560
Mva1269I GAATGC 2 cut(s) 660, 1181
MvaI CCWGG 3 cut(s) 6, 81, 560
MwoI GCNNNNNNNGC 4 cut(s) 141, 197, 266, 761
NcoI CCATGG 1 cut(s) 744
NdeI CATATG 1 cut(s) 594
NdeII GATC 3 cut(s) 228, 883, 897
NlaIII CATG 6 cut(s) 235, 674, 748, 848, 1189, 1298
NlaIV GGNNCC 2 cut(s) 222, 259
NmeAIII GCCGAG 1 cut(s) 261
NmuCI GTSAC 2 cut(s) 518, 1148
NsiI ATGCAT 1 cut(s) 1183
NspI RCATGY 1 cut(s) 674
NspV TTCGAA 1 cut(s) 1056
PciI ACATGT 1 cut(s) 670
PciSI GCTCTTC 1 cut(s) 618
PcsI WCGNNNNNNNCGW 1 cut(s) 1158
PctI GAATGC 2 cut(s) 660, 1181
PfeI GAWTC 3 cut(s) 76, 424, 481
PflFI GACNNNGTC 1 cut(s) 524
PkrI GCNGC 5 cut(s) 766, 934, 937, 1022, 1109
PleI GAGTC 2 cut(s) 245, 1010
PpsI GAGTC 2 cut(s) 245, 1010
PscI ACATGT 1 cut(s) 670
PsiI TTATAA 1 cut(s) 677
Psp124BI GAGCTC 1 cut(s) 242
Psp6I CCWGG 3 cut(s) 4, 79, 558
PspFI CCCAGC 1 cut(s) 618
PspGI CCWGG 3 cut(s) 4, 79, 558
PspN4I GGNNCC 2 cut(s) 222, 259
PspPI GGNCC 2 cut(s) 418, 834
PstI CTGCAG 1 cut(s) 937
PsuI RGATCY 1 cut(s) 883
PsyI GACNNNGTC 1 cut(s) 524
RsaI GTAC 3 cut(s) 649, 721, 1253
RsaNI GTAC 3 cut(s) 648, 720, 1252
RseI CAYNNNNRTG 2 cut(s) 293, 1299
SacI GAGCTC 1 cut(s) 242
SapI GCTCTTC 1 cut(s) 618
SaqAI TTAA 2 cut(s) 627, 1112
SatI GCNGC 5 cut(s) 765, 933, 936, 1021, 1108
Sau3AI GATC 3 cut(s) 228, 883, 897
Sau96I GGNCC 2 cut(s) 418, 834
SchI GAGTC 2 cut(s) 245, 1011
ScrFI CCNGG 3 cut(s) 6, 81, 560
SduI GDGCHC 3 cut(s) 242, 262, 438
SfaNI GCATC 1 cut(s) 1291
SfcI CTRYAG 2 cut(s) 15, 933
SfuI TTCGAA 1 cut(s) 1056
SinI GGWCC 1 cut(s) 834
SmiMI CAYNNNNRTG 2 cut(s) 293, 1299
SmlI CTYRAG 1 cut(s) 887
SmoI CTYRAG 1 cut(s) 887
Sse9I AATT 9 cut(s) 34, 338, 371, 378, 630, 694, 1041, 1052, 1133
SsiI CCGC 1 cut(s) 1108
SspMI CTAG 5 cut(s) 275, 645, 929, 968, 1016
SstI GAGCTC 1 cut(s) 242
StyD4I CCNGG 3 cut(s) 4, 79, 558
StyI CCWWGG 2 cut(s) 744, 973
TaaI ACNGT 5 cut(s) 197, 388, 838, 1199, 1311
TaiI ACGT 5 cut(s) 90, 215, 528, 1029, 1128
TaqI TCGA 2 cut(s) 470, 1056
TasI AATT 9 cut(s) 34, 338, 371, 378, 630, 694, 1041, 1052, 1133
TatI WGTACW 2 cut(s) 647, 719
TauI GCSGC 1 cut(s) 1110
TfiI GAWTC 3 cut(s) 76, 424, 481
Tru1I TTAA 2 cut(s) 627, 1112
Tru9I TTAA 2 cut(s) 627, 1112
TscAI CASTG 1 cut(s) 1316
TseFI GTSAC 2 cut(s) 518, 1148
TseI GCWGC 4 cut(s) 764, 932, 935, 1020
Tsp45I GTSAC 2 cut(s) 518, 1148
TspGWI ACGGA 1 cut(s) 766
TspRI CASTG 1 cut(s) 1316
Tth111I GACNNNGTC 1 cut(s) 524
VpaK11BI GGWCC 1 cut(s) 834
XapI RAATTY 2 cut(s) 34, 1041
XceI RCATGY 1 cut(s) 674
XcmI CCANNNNNNNNNTGG 1 cut(s) 805
XspI CTAG 5 cut(s) 275, 645, 929, 968, 1016
Zsp2I ATGCAT 1 cut(s) 1183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.