RchiOBHm_Chr2g0110261

Lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
21752670 .. 21755212
2543 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48396

Sequence Viewer

Length: 1668 bp
ATGTCTCTGTTTCTTGATCTTGAAACCATGGTCAAGTCTTTCAAGAGCTCAGCATCTCTACATGTCTTCTTTTCACTGCTGTTTCTTCCTTATGCTAGCTCAATCTATTTCAAACTACCCCGCTTTGAACCGAATGCAGGCAACATACTCTATCAAGGAGACGCAGCGCCTTCCATTGGAGCAATTGATCTAATTAACACTCGTGCTTTTGTATGCCGGGTTGGCTTGGCCACCTATGCTCAAAGGGTACCGCTCTGGGACACTAGTACAGGAAAGTCAATATTTCTTTTCAAATTATCCAACAGAAAGCTCACTGACTTCACAACTTACTTCTCATTCATCATTGACACAGATGGTTACCCTACTTATGGCCATGGAACTGCATTCTTTCTCGCTCCTGTTGGATTTCAACTCCCACCAAATTCAGTTGGTGGCTTTCTAGGGTTGTTCAACACAACAACCAGTGACTCCTCCGGCAACAAGATTTTTGGGGAGCGAAATTGGCTTGTTTCATGGGAGTTTAGTTCAACTTTGGATAGAAAAGAAACTACTGGAAAGAACACAAAGAAGAAAAAATTAGTAGTGGGTTTAACAGTTTCGGGTGTTCTGATAGCTGGGATATTTATAGTGTTGCTTGTGGTGTTGCGAAGGATGAAGCAAAAGAAAAGGCAAACTCCAGAGACAGAGAACTTAAACTCGATGAATGAAGACCTTGAAAGAAGAGCAGGACCGAGACGGTTTTCTTATACAGATCTTGCTACAGCTACTAACAATTTCTCTAATCAGAGGAAGTTAGGGGAAGAGGGGTTTGGTGCTGTTTACAGGGGCTACTTGGCTGATTTAGATACTGTGGAGTACAGAACTGAGGTAAAGATTATAAGCAGCTTGAGACACCGAAATCTGGTGCAACTCATAGGATGGTGCCATGATGGAGGACAATTCCTACTAGTGTACGAGTTCATGCCAAATGGTAGCCTTGATGCTCACCTATTTGGGAAGAGTAGGTCTGCTCTCTCCTGGGCCATGAGATACAAGATATCTTTAGGGTTGGGCTCTGCACTGCTTTATCTTCATGAAGAGTGGGAGCAATGTGTTGTTCACCGGGATATTAAATCAAGCAATATCATGCTAGATTCCAGCTTTAATGTCAAACTCGGTGACTTTGGGTTAGCTCGGCTAATGGACCATGAGCTAGGTCCCCAAACAACTGGAGTGGTTGGGACGCTAGGTTACATGGCTCCAGAATATTTCAAGACAGGTCGGGCTAGTAAAGAGTCGGATGTTTATAGCTGCGGGGTGGTCATCTTAGAAATCGCCACTGGTAAAAGGTCAGTGGATCGTATGGGAGAGGATTTAGAAATGGGACTGATAGAGTGGGTTTGGGACCTTTATGGGAAAGGAAATTTTCTTATGGCAATGGATGAGAAGCTGCACTTGGACTATAATGAGAAGCAAGCAGAGTGCATGATAGTTGTAGGATTGTGGTGTATTCACCCTAATAAAAGCTTAAGGCCCTCAATAAGGCAAGCAGTTCATGTTCTGAACTTTGAGGTAGCATTGCCAAATGGTCCTACAAATATGCTTGTTCCTACAAATATGCATGTTCATACACCATCAATCAGCTCTGGTAAACCGCTCATAACTACAAGTCTTGAAGAAGGTCGTTGA

Protein Analysis

555

Amino Acids

62.14

Weight (kDa)

8.52

Isoelectric Point (pI)

29.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 36 - 163 3.6e-21 Legume lectin domain
Pkinase PF00069 285 - 512 6.6e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 285 - 509 2.3e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 878
Acc65I GGTACC 1 cut(s) 247
AccB1I GGYRCC 2 cut(s) 247, 921
AccBSI CCGCTC 2 cut(s) 253, 1636
AciI CCGC 4 cut(s) 121, 251, 1293, 1634
AclWI GGATC 1 cut(s) 1344
AcoI YGGCCR 2 cut(s) 228, 370
AcsI RAATTY 2 cut(s) 421, 1402
AfaI GTAC 4 cut(s) 249, 268, 857, 953
AfiI CCNNNNNNNGG 5 cut(s) 137, 176, 368, 901, 1521
AflII CTTAAG 1 cut(s) 1507
AflIII ACRYGT 1 cut(s) 61
AhlI ACTAGT 2 cut(s) 263, 946
AjnI CCWGG 1 cut(s) 1016
AjuI GAANNNNNNNTTGG 4 cut(s) 792, 824, 1418, 1450
Alw21I GWGCWC 1 cut(s) 50
Alw26I GTCTC 5 cut(s) 9, 153, 674, 727, 883
AlwI GGATC 1 cut(s) 1344
AoxI GGCC 4 cut(s) 228, 370, 1020, 1511
ApeKI GCWGC 4 cut(s) 164, 882, 1290, 1429
ApoI RAATTY 2 cut(s) 421, 1402
Asp718I GGTACC 1 cut(s) 247
AspLEI GCGC 1 cut(s) 169
AspS9I GGNCC 7 cut(s) 728, 1020, 1183, 1196, 1384, 1512, 1568
AsuC2I CCSGG 2 cut(s) 218, 1103
AsuHPI GGTGA 4 cut(s) 977, 1091, 1169, 1484
AsuNHI GCTAGC 1 cut(s) 95
AvaII GGWCC 5 cut(s) 728, 1183, 1196, 1384, 1568
BalI TGGCCA 2 cut(s) 230, 372
BanI GGYRCC 2 cut(s) 247, 921
BanII GRGCYC 2 cut(s) 50, 1055
BauI CACGAG 1 cut(s) 201
BbsI GAAGAC 2 cut(s) 58, 714
Bbv12I GWGCWC 1 cut(s) 50
BbvI GCAGC 4 cut(s) 176, 894, 1277, 1416
BccI CCATC 4 cut(s) 347, 912, 923, 1621
BciT130I CCWGG 1 cut(s) 1018
BcnI CCSGG 2 cut(s) 218, 1103
BcoDI GTCTC 5 cut(s) 9, 153, 674, 727, 883
BcuI ACTAGT 2 cut(s) 263, 946
BfaI CTAG 8 cut(s) 96, 264, 440, 947, 1130, 1193, 1226, 1266
BfmI CTRYAG 1 cut(s) 759
BfoI RGCGCY 1 cut(s) 170
BfrI CTTAAG 1 cut(s) 1507
BglI GCCNNNNNGGC 1 cut(s) 222
BglII AGATCT 1 cut(s) 751
BisI GCNGC 4 cut(s) 165, 883, 1291, 1430
BlpI GCTNAGC 1 cut(s) 49
BlsI GCNGC 4 cut(s) 166, 884, 1292, 1431
Bme1390I CCNGG 3 cut(s) 218, 1018, 1103
Bme18I GGWCC 5 cut(s) 728, 1183, 1196, 1384, 1568
BmgT120I GGNCC 7 cut(s) 728, 1020, 1183, 1196, 1384, 1512, 1568
BmiI GGNNCC 5 cut(s) 249, 923, 1198, 1239, 1385
BmrFI CCNGG 3 cut(s) 218, 1018, 1103
BmsI GCATC 2 cut(s) 62, 970
BmtI GCTAGC 1 cut(s) 99
BpiI GAAGAC 2 cut(s) 58, 714
BpmI CTGGAG 3 cut(s) 660, 1224, 1230
Bpu1102I GCTNAGC 1 cut(s) 49
BpuEI CTTGAG 1 cut(s) 907
BpuMI CCSGG 2 cut(s) 218, 1103
BsaJI CCNNGG 3 cut(s) 27, 373, 1017
Bsc4I CCNNNNNNNGG 5 cut(s) 137, 176, 368, 901, 1521
Bse1I ACTGG 4 cut(s) 462, 556, 1213, 1324
Bse3DI GCAATG 3 cut(s) 1094, 1422, 1556
BseBI CCWGG 1 cut(s) 1018
BseDI CCNNGG 3 cut(s) 27, 373, 1017
BseGI GGATG 4 cut(s) 657, 923, 1285, 1426
BseLI CCNNNNNNNGG 5 cut(s) 137, 176, 368, 901, 1521
BseMI GCAATG 3 cut(s) 1094, 1422, 1556
BseMII CTCAG 2 cut(s) 63, 855
BseNI ACTGG 4 cut(s) 462, 556, 1213, 1324
BseRI GAGGAG 1 cut(s) 460
BseXI GCAGC 4 cut(s) 176, 894, 1277, 1416
BseYI CCCAGC 1 cut(s) 614
BsgI GTGCAG 2 cut(s) 1041, 1415
BshFI GGCC 4 cut(s) 230, 372, 1022, 1513
BshNI GGYRCC 2 cut(s) 247, 921
BsiHKAI GWGCWC 1 cut(s) 50
BsiSI CCGG 3 cut(s) 217, 474, 1102
BslFI GGGAC 5 cut(s) 272, 1182, 1234, 1377, 1397
BslI CCNNNNNNNGG 5 cut(s) 137, 176, 368, 901, 1521
BsmAI GTCTC 5 cut(s) 9, 153, 674, 727, 883
BsmBI CGTCTC 2 cut(s) 153, 727
BsmFI GGGAC 5 cut(s) 272, 1182, 1234, 1377, 1397
BsmI GAATGC 2 cut(s) 139, 383
BsnI GGCC 4 cut(s) 230, 372, 1022, 1513
Bsp1286I GDGCHC 2 cut(s) 50, 1055
Bsp143I GATC 4 cut(s) 16, 187, 751, 1336
Bsp1720I GCTNAGC 1 cut(s) 49
Bsp19I CCATGG 2 cut(s) 27, 373
BspACI CCGC 4 cut(s) 121, 251, 1293, 1634
BspANI GGCC 4 cut(s) 230, 372, 1022, 1513
BspCNI CTCAG 2 cut(s) 62, 856
BspHI TCATGA 1 cut(s) 1072
BspLI GGNNCC 5 cut(s) 249, 923, 1198, 1239, 1385
BspOI GCTAGC 1 cut(s) 99
BspPI GGATC 1 cut(s) 1344
BspQI GCTCTTC 1 cut(s) 715
BspT107I GGYRCC 2 cut(s) 247, 921
BspTI CTTAAG 1 cut(s) 1507
BsrBI CCGCTC 2 cut(s) 253, 1636
BsrDI GCAATG 3 cut(s) 1094, 1422, 1556
BsrI ACTGG 4 cut(s) 462, 556, 1213, 1324
BssECI CCNNGG 3 cut(s) 27, 373, 1017
BssMI GATC 4 cut(s) 16, 187, 751, 1336
BssSI CACGAG 1 cut(s) 201
BssT1I CCWWGG 2 cut(s) 27, 373
Bst2BI CACGAG 1 cut(s) 201
Bst2UI CCWGG 1 cut(s) 1018
Bst4CI ACNGT 3 cut(s) 595, 738, 850
Bst6I CTCTTC 4 cut(s) 715, 795, 992, 1071
BstAFI CTTAAG 1 cut(s) 1507
BstC8I GCNNGC 4 cut(s) 97, 139, 1455, 1527
BstDEI CTNAG 3 cut(s) 49, 864, 1306
BstDSI CCRYGG 2 cut(s) 27, 373
BstEII GGTNACC 1 cut(s) 356
BstENI CCTNNNNNAGG 1 cut(s) 1519
BstF5I GGATG 4 cut(s) 657, 923, 1285, 1426
BstH2I RGCGCY 1 cut(s) 170
BstHHI GCGC 1 cut(s) 169
BstKTI GATC 4 cut(s) 19, 190, 754, 1339
BstMAI GTCTC 5 cut(s) 9, 153, 674, 727, 883
BstMBI GATC 4 cut(s) 16, 187, 751, 1336
BstMWI GCNNNNNNNGC 3 cut(s) 222, 236, 502
BstNI CCWGG 1 cut(s) 1018
BstNSI RCATGY 2 cut(s) 65, 1604
BstPI GGTNACC 1 cut(s) 356
BstSCI CCNGG 3 cut(s) 216, 1016, 1101
BstSFI CTRYAG 1 cut(s) 759
BstV1I GCAGC 4 cut(s) 176, 894, 1277, 1416
BstV2I GAAGAC 2 cut(s) 58, 714
BstX2I RGATCY 1 cut(s) 751
BstXI CCANNNNNNTGG 1 cut(s) 1208
BstYI RGATCY 1 cut(s) 751
BsuRI GGCC 4 cut(s) 230, 372, 1022, 1513
BtgI CCRYGG 2 cut(s) 27, 373
BtsCI GGATG 4 cut(s) 657, 923, 1285, 1426
BtsI GCAGTG 2 cut(s) 74, 1058
BtsIMutI CAGTG 6 cut(s) 74, 312, 469, 1058, 1317, 1338
Cac8I GCNNGC 4 cut(s) 97, 139, 1455, 1527
CciI TCATGA 1 cut(s) 1072
CfoI GCGC 1 cut(s) 169
Cfr13I GGNCC 7 cut(s) 728, 1020, 1183, 1196, 1384, 1512, 1568
CseI GACGC 2 cut(s) 170, 1231
Csp6I GTAC 4 cut(s) 248, 267, 856, 952
CspCI CAANNNNNGTGG 2 cut(s) 1194, 1229
CviQI GTAC 4 cut(s) 248, 267, 856, 952
DdeI CTNAG 3 cut(s) 49, 864, 1306
DpnI GATC 4 cut(s) 18, 189, 753, 1338
DpnII GATC 4 cut(s) 16, 187, 751, 1336
EaeI YGGCCR 2 cut(s) 228, 370
Eam1104I CTCTTC 4 cut(s) 715, 795, 992, 1071
EarI CTCTTC 4 cut(s) 715, 795, 992, 1071
Ecl136II GAGCTC 1 cut(s) 48
Eco130I CCWWGG 2 cut(s) 27, 373
Eco24I GRGCYC 2 cut(s) 50, 1055
Eco32I GATATC 1 cut(s) 1038
Eco47I GGWCC 5 cut(s) 728, 1183, 1196, 1384, 1568
Eco53kI GAGCTC 1 cut(s) 48
Eco91I GGTNACC 1 cut(s) 356
EcoICRI GAGCTC 1 cut(s) 48
EcoNI CCTNNNNNAGG 1 cut(s) 1519
EcoO109I RGGNCCY 3 cut(s) 1196, 1384, 1512
EcoO65I GGTNACC 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 1016
EcoRV GATATC 1 cut(s) 1038
EcoT14I CCWWGG 2 cut(s) 27, 373
EcoT22I ATGCAT 1 cut(s) 1602
EcoT38I GRGCYC 2 cut(s) 50, 1055
ErhI CCWWGG 2 cut(s) 27, 373
Esp3I CGTCTC 2 cut(s) 153, 727
FalI AAGNNNNNCTT 2 cut(s) 1418, 1450
FaqI GGGAC 5 cut(s) 272, 1182, 1234, 1377, 1397
FauI CCCGC 2 cut(s) 128, 1286
Fnu4HI GCNGC 4 cut(s) 165, 883, 1291, 1430
FokI GGATG 4 cut(s) 664, 930, 1292, 1433
FriOI GRGCYC 2 cut(s) 50, 1055
Fsp4HI GCNGC 4 cut(s) 165, 883, 1291, 1430
FspBI CTAG 8 cut(s) 96, 264, 440, 947, 1130, 1193, 1226, 1266
GlaI GCGC 1 cut(s) 168
GluI GCNGC 4 cut(s) 165, 883, 1291, 1430
GsaI CCCAGC 1 cut(s) 618
GsuI CTGGAG 3 cut(s) 660, 1224, 1230
HaeII RGCGCY 1 cut(s) 170
HaeIII GGCC 4 cut(s) 230, 372, 1022, 1513
HapII CCGG 3 cut(s) 217, 474, 1102
HgaI GACGC 2 cut(s) 170, 1231
HhaI GCGC 1 cut(s) 169
Hin6I GCGC 1 cut(s) 167
HinP1I GCGC 1 cut(s) 167
HindIII AAGCTT 1 cut(s) 1504
HinfI GANTC 3 cut(s) 467, 1133, 1274
HpaII CCGG 3 cut(s) 217, 474, 1102
HphI GGTGA 4 cut(s) 977, 1091, 1169, 1484
Hpy166II GTNNAC 4 cut(s) 820, 952, 1099, 1631
Hpy188I TCNGA 4 cut(s) 609, 786, 1279, 1542
Hpy188III TCNNGA 8 cut(s) 14, 20, 43, 677, 1073, 1241, 1252, 1652
Hpy8I GTNNAC 4 cut(s) 820, 952, 1099, 1631
HpyAV CCTTC 3 cut(s) 180, 642, 1652
HpyCH4III ACNGT 3 cut(s) 595, 738, 850
HpyCH4V TGCA 7 cut(s) 137, 383, 907, 1058, 1432, 1464, 1600
HpyF10VI GCNNNNNNNGC 3 cut(s) 222, 236, 502
HpyF3I CTNAG 3 cut(s) 49, 864, 1306
HspAI GCGC 1 cut(s) 167
KpnI GGTACC 1 cut(s) 251
Kzo9I GATC 4 cut(s) 16, 187, 751, 1336
LguI GCTCTTC 1 cut(s) 715
LmnI GCTCC 5 cut(s) 179, 400, 493, 1084, 1243
Lsp1109I GCAGC 4 cut(s) 176, 894, 1277, 1416
LweI GCATC 2 cut(s) 62, 970
MaeI CTAG 8 cut(s) 96, 264, 440, 947, 1130, 1193, 1226, 1266
MaeIII GTNAC 4 cut(s) 356, 464, 1157, 1229
MalI GATC 4 cut(s) 18, 189, 753, 1338
MbiI CCGCTC 2 cut(s) 253, 1636
MboI GATC 4 cut(s) 16, 187, 751, 1336
MfeI CAATTG 1 cut(s) 183
MflI RGATCY 1 cut(s) 751
MhlI GDGCHC 2 cut(s) 50, 1055
MlsI TGGCCA 2 cut(s) 230, 372
MluCI AATT 9 cut(s) 183, 192, 293, 421, 499, 575, 772, 938, 1402
MluNI TGGCCA 2 cut(s) 230, 372
MlyI GAGTC 2 cut(s) 461, 1283
MmeI TCCRAC 3 cut(s) 324, 382, 1257
MnlI CCTC 8 cut(s) 481, 780, 796, 859, 926, 1342, 1525, 1543
Mox20I TGGCCA 2 cut(s) 230, 372
Mph1103I ATGCAT 1 cut(s) 1602
MscI TGGCCA 2 cut(s) 230, 372
MseI TTAA 6 cut(s) 195, 590, 692, 1110, 1143, 1508
Msp20I TGGCCA 2 cut(s) 230, 372
MspCI CTTAAG 1 cut(s) 1507
MspI CCGG 3 cut(s) 217, 474, 1102
MspR9I CCNGG 3 cut(s) 218, 1018, 1103
MunI CAATTG 1 cut(s) 183
Mva1269I GAATGC 2 cut(s) 139, 383
MvaI CCWGG 1 cut(s) 1018
MwoI GCNNNNNNNGC 3 cut(s) 222, 236, 502
NciI CCSGG 2 cut(s) 218, 1103
NcoI CCATGG 2 cut(s) 27, 373
NdeII GATC 4 cut(s) 16, 187, 751, 1336
NheI GCTAGC 1 cut(s) 95
NlaIV GGNNCC 5 cut(s) 249, 923, 1198, 1239, 1385
NmeAIII GCCGAG 1 cut(s) 1153
NmuCI GTSAC 2 cut(s) 464, 1157
NsiI ATGCAT 1 cut(s) 1602
NspI RCATGY 2 cut(s) 65, 1604
PagI TCATGA 1 cut(s) 1072
PciI ACATGT 1 cut(s) 61
PciSI GCTCTTC 1 cut(s) 715
PctI GAATGC 2 cut(s) 139, 383
PfeI GAWTC 1 cut(s) 1133
PkrI GCNGC 4 cut(s) 166, 884, 1292, 1431
PleI GAGTC 2 cut(s) 461, 1282
PpsI GAGTC 2 cut(s) 461, 1282
PpuMI RGGWCCY 2 cut(s) 1196, 1384
PscI ACATGT 1 cut(s) 61
PsiI TTATAA 1 cut(s) 878
Psp124BI GAGCTC 1 cut(s) 50
Psp5II RGGWCCY 2 cut(s) 1196, 1384
Psp6I CCWGG 1 cut(s) 1016
PspEI GGTNACC 1 cut(s) 356
PspFI CCCAGC 1 cut(s) 614
PspGI CCWGG 1 cut(s) 1016
PspN4I GGNNCC 5 cut(s) 249, 923, 1198, 1239, 1385
PspPI GGNCC 7 cut(s) 728, 1020, 1183, 1196, 1384, 1512, 1568
PspPPI RGGWCCY 2 cut(s) 1196, 1384
PsuI RGATCY 1 cut(s) 751
RsaI GTAC 4 cut(s) 249, 268, 857, 953
RsaNI GTAC 4 cut(s) 248, 267, 856, 952
SacI GAGCTC 1 cut(s) 50
SapI GCTCTTC 1 cut(s) 715
SaqAI TTAA 6 cut(s) 195, 590, 692, 1110, 1143, 1508
SatI GCNGC 4 cut(s) 165, 883, 1291, 1430
Sau3AI GATC 4 cut(s) 16, 187, 751, 1336
Sau96I GGNCC 7 cut(s) 728, 1020, 1183, 1196, 1384, 1512, 1568
SchI GAGTC 2 cut(s) 461, 1283
ScrFI CCNGG 3 cut(s) 218, 1018, 1103
SduI GDGCHC 2 cut(s) 50, 1055
SfaNI GCATC 2 cut(s) 62, 970
SfcI CTRYAG 1 cut(s) 759
SinI GGWCC 5 cut(s) 728, 1183, 1196, 1384, 1568
SmlI CTYRAG 2 cut(s) 886, 1507
SmoI CTYRAG 2 cut(s) 886, 1507
SpeI ACTAGT 2 cut(s) 263, 946
Sse9I AATT 9 cut(s) 183, 192, 293, 421, 499, 575, 772, 938, 1402
SsiI CCGC 4 cut(s) 121, 251, 1293, 1634
SspI AATATT 2 cut(s) 282, 1247
SspMI CTAG 8 cut(s) 96, 264, 440, 947, 1130, 1193, 1226, 1266
SstI GAGCTC 1 cut(s) 50
StyD4I CCNGG 3 cut(s) 216, 1016, 1101
StyI CCWWGG 2 cut(s) 27, 373
TaaI ACNGT 3 cut(s) 595, 738, 850
TaqI TCGA 1 cut(s) 698
TaqII GACCGA 1 cut(s) 745
TasI AATT 9 cut(s) 183, 192, 293, 421, 499, 575, 772, 938, 1402
TatI WGTACW 2 cut(s) 266, 855
TfiI GAWTC 1 cut(s) 1133
Tru1I TTAA 6 cut(s) 195, 590, 692, 1110, 1143, 1508
Tru9I TTAA 6 cut(s) 195, 590, 692, 1110, 1143, 1508
TscAI CASTG 6 cut(s) 81, 319, 469, 1065, 1324, 1338
TseFI GTSAC 2 cut(s) 464, 1157
TseI GCWGC 4 cut(s) 164, 882, 1290, 1429
Tsp45I GTSAC 2 cut(s) 464, 1157
TspRI CASTG 6 cut(s) 81, 319, 469, 1065, 1324, 1338
Vha464I CTTAAG 1 cut(s) 1507
VpaK11BI GGWCC 5 cut(s) 728, 1183, 1196, 1384, 1568
XagI CCTNNNNNAGG 1 cut(s) 1519
XapI RAATTY 2 cut(s) 421, 1402
XceI RCATGY 2 cut(s) 65, 1604
XspI CTAG 8 cut(s) 96, 264, 440, 947, 1130, 1193, 1226, 1266
Zsp2I ATGCAT 1 cut(s) 1602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.