Rroxscaffold_1G00047910

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
67853310 .. 67854734
1425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00047910.1

Sequence Viewer

Length: 957 bp
ATGCCCAATGGTAGCTTGGATACTCATTTGTTCAATGAAAGAAGCTTGTTAACTTGGGATGTAAGATACAAAATTGCACATGGATTGGCCTTGGGATTGCTTTATCTACACCAAGGATGGGAACAATGTGTGCTGCACAGGGATATCAAATCCAGCAATGTTATGTTGGATTCCAATTTTAACGCGAAACTTGGAGATTTTGGGTTAGCCAAACTTGTAGACCATGGAAAACTATCGAAAACAACAATTGTGGCCGGAACCATGGGCTACATGGCTACGGAATATGTTACAACGGGAAAGGCTAGCAAGGAAACAGATGTCTATAGTTTTGGAGTTGTTGCTTTAGAAATAGCTTGTGGGAGAAAACCAATTGATCACAGCTATGAAGAAAAGCAAAGCAATATGGTCGAGTGGGTTTGGGAGCTCTATGGAAAGGGGAAAATCATTGAAGCAGCCGACCCAAGATTGTGCGGGGAATTTGATGGGAAGCAAATGGAGTGCTTAATGATGGTTGGGTTATGGTGTGCTCATCCGGATTTCAACTGTAGGCCTTTGATACAACAAGCAATCCAAGTGCTTAACTTCGAAATTCCATTGCCCAATCTCCCATTGACAATGCCGGTGGCCTTCGCTCTTCCATCATCACGGTCGATGCCGTATAGTGGTGACACTATTGAGGTCAAATCCACAGCCCAAATGAGATCATCATCCCAGCTAGACCTAACAAAGCTGAACCAGCCCAAAACCACCCCACCAATAGCACAACGCCTACCATGGGCATTTCGGTGCCGCCAACAACATCCATCCACTCCGCTTCCAAATTACTCGACTCGAGGAACCAAGTATCCCCACCACGGACCAAATGGAACCACCGCTACCACTAGAACAAAGTCGCAACCTACTTTGACCTCCAACGGGATTGAACGGGTGACCAAACCTTGCGAGTCTCCCGCCTAG

Protein Analysis

318

Amino Acids

35.41

Weight (kDa)

8.54

Isoelectric Point (pI)

33.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 1 - 135 3.5e-27 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1 - 136 3.3e-24 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 786
AccI GTMKAC 1 cut(s) 219
AccII CGCG 1 cut(s) 185
AccIII TCCGGA 1 cut(s) 532
AciI CCGC 5 cut(s) 471, 790, 812, 873, 951
AcoI YGGCCR 1 cut(s) 252
AcsI RAATTY 2 cut(s) 476, 588
AfiI CCNNNNNNNGG 5 cut(s) 118, 662, 775, 854, 915
AgsI TTSAA 4 cut(s) 34, 449, 541, 923
AloI GAACNNNNNNTCC 2 cut(s) 829, 861
AluBI AGCT 7 cut(s) 15, 45, 353, 381, 424, 715, 730
AluI AGCT 7 cut(s) 15, 45, 353, 381, 424, 715, 730
Alw21I GWGCWC 2 cut(s) 426, 529
Alw26I GTCTC 1 cut(s) 951
Ama87I CYCGRG 1 cut(s) 831
Aor13HI TCCGGA 1 cut(s) 532
AoxI GGCC 4 cut(s) 87, 252, 548, 624
ApeKI GCWGC 2 cut(s) 133, 452
ApoI RAATTY 2 cut(s) 476, 588
AspS9I GGNCC 1 cut(s) 857
AsuHPI GGTGA 2 cut(s) 677, 940
AsuII TTCGAA 1 cut(s) 585
AsuNHI GCTAGC 1 cut(s) 302
AvaI CYCGRG 1 cut(s) 831
AvaII GGWCC 1 cut(s) 857
BanI GGYRCC 1 cut(s) 786
BanII GRGCYC 1 cut(s) 426
Bbv12I GWGCWC 2 cut(s) 426, 529
BbvI GCAGC 2 cut(s) 120, 464
BccI CCATC 5 cut(s) 111, 476, 502, 646, 811
BceAI ACGGC 1 cut(s) 640
BcgI CGANNNNNNTGC 2 cut(s) 388, 422
BciVI GTATCC 2 cut(s) 13, 855
BclI TGATCA 1 cut(s) 373
BcoDI GTCTC 1 cut(s) 951
BfaI CTAG 4 cut(s) 303, 716, 882, 955
BfmI CTRYAG 2 cut(s) 322, 544
BfuI GTATCC 2 cut(s) 13, 855
BisI GCNGC 3 cut(s) 134, 453, 790
BlsI GCNGC 3 cut(s) 135, 454, 791
Bme18I GGWCC 1 cut(s) 857
BmeT110I CYCGRG 1 cut(s) 831
BmgT120I GGNCC 1 cut(s) 857
BmiI GGNNCC 4 cut(s) 259, 788, 838, 868
BmsI GCATC 1 cut(s) 642
BmtI GCTAGC 1 cut(s) 306
Bpu14I TTCGAA 1 cut(s) 585
BsaBI GATNNNNATC 1 cut(s) 706
BsaJI CCNNGG 6 cut(s) 90, 112, 223, 261, 773, 853
BsaWI WCCGGW 1 cut(s) 532
Bsc4I CCNNNNNNNGG 5 cut(s) 118, 662, 775, 854, 915
Bse118I RCCGGY 1 cut(s) 619
Bse3DI GCAATG 2 cut(s) 163, 593
Bse8I GATNNNNATC 1 cut(s) 706
BseAI TCCGGA 1 cut(s) 532
BseDI CCNNGG 6 cut(s) 90, 112, 223, 261, 773, 853
BseGI GGATG 6 cut(s) 64, 122, 529, 707, 799, 803
BseJI GATNNNNATC 1 cut(s) 706
BseLI CCNNNNNNNGG 5 cut(s) 118, 662, 775, 854, 915
BseMI GCAATG 2 cut(s) 163, 593
BseXI GCAGC 2 cut(s) 120, 464
BseYI CCCAGC 1 cut(s) 711
BsgI GTGCAG 1 cut(s) 119
Bsh1236I CGCG 1 cut(s) 185
Bsh1285I CGRYCG 1 cut(s) 650
BshFI GGCC 4 cut(s) 89, 254, 550, 626
BshNI GGYRCC 1 cut(s) 786
BsiEI CGRYCG 1 cut(s) 650
BsiHKAI GWGCWC 2 cut(s) 426, 529
BsiHKCI CYCGRG 1 cut(s) 831
BsiSI CCGG 3 cut(s) 255, 533, 620
BslI CCNNNNNNNGG 5 cut(s) 118, 662, 775, 854, 915
BsmAI GTCTC 1 cut(s) 951
BsnI GGCC 4 cut(s) 89, 254, 550, 626
BsoBI CYCGRG 1 cut(s) 831
Bsp119I TTCGAA 1 cut(s) 585
Bsp1286I GDGCHC 2 cut(s) 426, 529
Bsp13I TCCGGA 1 cut(s) 532
Bsp143I GATC 2 cut(s) 373, 701
Bsp19I CCATGG 3 cut(s) 223, 261, 773
BspACI CCGC 5 cut(s) 471, 790, 812, 873, 951
BspANI GGCC 4 cut(s) 89, 254, 550, 626
BspEI TCCGGA 1 cut(s) 532
BspFNI CGCG 1 cut(s) 185
BspLI GGNNCC 4 cut(s) 259, 788, 838, 868
BspOI GCTAGC 1 cut(s) 306
BspQI GCTCTTC 1 cut(s) 639
BspT104I TTCGAA 1 cut(s) 585
BspT107I GGYRCC 1 cut(s) 786
BsrDI GCAATG 2 cut(s) 163, 593
BsrFI RCCGGY 1 cut(s) 619
BssAI RCCGGY 1 cut(s) 619
BssECI CCNNGG 6 cut(s) 90, 112, 223, 261, 773, 853
BssMI GATC 2 cut(s) 373, 701
BssT1I CCWWGG 5 cut(s) 90, 112, 223, 261, 773
Bst4CI ACNGT 2 cut(s) 545, 648
Bst6I CTCTTC 1 cut(s) 639
BstBI TTCGAA 1 cut(s) 585
BstC8I GCNNGC 1 cut(s) 304
BstDSI CCRYGG 4 cut(s) 223, 261, 773, 853
BstEII GGTNACC 1 cut(s) 928
BstF5I GGATG 6 cut(s) 64, 122, 529, 707, 799, 803
BstFNI CGCG 1 cut(s) 185
BstKTI GATC 2 cut(s) 376, 704
BstMAI GTCTC 1 cut(s) 951
BstMBI GATC 2 cut(s) 373, 701
BstMCI CGRYCG 1 cut(s) 650
BstMWI GCNNNNNNNGC 1 cut(s) 736
BstPI GGTNACC 1 cut(s) 928
BstSFI CTRYAG 2 cut(s) 322, 544
BstUI CGCG 1 cut(s) 185
BstV1I GCAGC 2 cut(s) 120, 464
BsuI GTATCC 2 cut(s) 13, 855
BsuRI GGCC 4 cut(s) 89, 254, 550, 626
BtgI CCRYGG 4 cut(s) 223, 261, 773, 853
BtsCI GGATG 6 cut(s) 64, 122, 529, 707, 799, 803
Cac8I GCNNGC 1 cut(s) 304
Cfr10I RCCGGY 1 cut(s) 619
Cfr13I GGNCC 1 cut(s) 857
CspCI CAANNNNNGTGG 4 cut(s) 231, 266, 603, 638
CviAII CATG 5 cut(s) 80, 224, 262, 271, 774
DpnI GATC 2 cut(s) 375, 703
DpnII GATC 2 cut(s) 373, 701
EaeI YGGCCR 1 cut(s) 252
Eam1104I CTCTTC 1 cut(s) 639
EarI CTCTTC 1 cut(s) 639
Ecl136II GAGCTC 1 cut(s) 424
Eco130I CCWWGG 5 cut(s) 90, 112, 223, 261, 773
Eco147I AGGCCT 1 cut(s) 550
Eco24I GRGCYC 1 cut(s) 426
Eco32I GATATC 1 cut(s) 145
Eco47I GGWCC 1 cut(s) 857
Eco53kI GAGCTC 1 cut(s) 424
Eco88I CYCGRG 1 cut(s) 831
Eco91I GGTNACC 1 cut(s) 928
EcoICRI GAGCTC 1 cut(s) 424
EcoO65I GGTNACC 1 cut(s) 928
EcoRV GATATC 1 cut(s) 145
EcoT14I CCWWGG 5 cut(s) 90, 112, 223, 261, 773
EcoT38I GRGCYC 1 cut(s) 426
ErhI CCWWGG 5 cut(s) 90, 112, 223, 261, 773
FaeI CATG 5 cut(s) 83, 227, 265, 274, 777
FatI CATG 5 cut(s) 79, 223, 261, 270, 773
FauI CCCGC 1 cut(s) 464
FbaI TGATCA 1 cut(s) 373
FblI GTMKAC 1 cut(s) 219
Fnu4HI GCNGC 3 cut(s) 134, 453, 790
FokI GGATG 6 cut(s) 71, 129, 516, 694, 786, 790
FriOI GRGCYC 1 cut(s) 426
Fsp4HI GCNGC 3 cut(s) 134, 453, 790
FspBI CTAG 4 cut(s) 303, 716, 882, 955
GluI GCNGC 3 cut(s) 134, 453, 790
GsaI CCCAGC 1 cut(s) 715
HaeIII GGCC 4 cut(s) 89, 254, 550, 626
HapII CCGG 3 cut(s) 255, 533, 620
Hin1II CATG 5 cut(s) 83, 227, 265, 274, 777
HincII GTYRAC 1 cut(s) 51
HindII GTYRAC 1 cut(s) 51
HindIII AAGCTT 1 cut(s) 43
HinfI GANTC 3 cut(s) 170, 829, 944
HpaI GTTAAC 1 cut(s) 51
HpaII CCGG 3 cut(s) 255, 533, 620
HphI GGTGA 2 cut(s) 677, 940
Hpy166II GTNNAC 2 cut(s) 51, 220
Hpy188III TCNNGA 1 cut(s) 533
Hpy8I GTNNAC 2 cut(s) 51, 220
HpyAV CCTTC 1 cut(s) 637
HpyCH4III ACNGT 2 cut(s) 545, 648
HpyCH4V TGCA 2 cut(s) 77, 136
HpyF10VI GCNNNNNNNGC 1 cut(s) 736
Hsp92II CATG 5 cut(s) 83, 227, 265, 274, 777
Kpn2I TCCGGA 1 cut(s) 532
Ksp22I TGATCA 1 cut(s) 373
KspAI GTTAAC 1 cut(s) 51
Kzo9I GATC 2 cut(s) 373, 701
LguI GCTCTTC 1 cut(s) 639
LmnI GCTCC 1 cut(s) 421
LpnPI CCDG 7 cut(s) 124, 166, 268, 546, 633, 725, 749
Lsp1109I GCAGC 2 cut(s) 120, 464
LweI GCATC 1 cut(s) 642
MaeI CTAG 4 cut(s) 303, 716, 882, 955
MaeIII GTNAC 3 cut(s) 286, 665, 928
MalI GATC 2 cut(s) 375, 703
MboI GATC 2 cut(s) 373, 701
MboII GAAGA 2 cut(s) 398, 626
MfeI CAATTG 2 cut(s) 246, 369
MhlI GDGCHC 2 cut(s) 426, 529
MluCI AATT 7 cut(s) 72, 175, 246, 369, 476, 588, 820
MlyI GAGTC 2 cut(s) 823, 953
MmeI TCCRAC 2 cut(s) 147, 936
MnlI CCTC 3 cut(s) 670, 827, 919
MroI TCCGGA 1 cut(s) 532
MseI TTAA 4 cut(s) 50, 180, 503, 579
MslI CAYNNNNRTG 2 cut(s) 381, 784
MspI CCGG 3 cut(s) 255, 533, 620
MunI CAATTG 2 cut(s) 246, 369
MvnI CGCG 1 cut(s) 185
MwoI GCNNNNNNNGC 1 cut(s) 736
NcoI CCATGG 3 cut(s) 223, 261, 773
NdeII GATC 2 cut(s) 373, 701
NheI GCTAGC 1 cut(s) 302
NlaIII CATG 5 cut(s) 83, 227, 265, 274, 777
NlaIV GGNNCC 4 cut(s) 259, 788, 838, 868
NmuCI GTSAC 2 cut(s) 665, 928
NspV TTCGAA 1 cut(s) 585
PaeR7I CTCGAG 1 cut(s) 831
PceI AGGCCT 1 cut(s) 550
PciSI GCTCTTC 1 cut(s) 639
PfeI GAWTC 1 cut(s) 170
PkrI GCNGC 3 cut(s) 135, 454, 791
PleI GAGTC 2 cut(s) 823, 952
PpsI GAGTC 2 cut(s) 823, 952
Psp124BI GAGCTC 1 cut(s) 426
PspEI GGTNACC 1 cut(s) 928
PspFI CCCAGC 1 cut(s) 711
PspN4I GGNNCC 4 cut(s) 259, 788, 838, 868
PspPI GGNCC 1 cut(s) 857
PspXI VCTCGAGB 1 cut(s) 831
PsrI GAACNNNNNNTAC 2 cut(s) 859, 891
RseI CAYNNNNRTG 2 cut(s) 381, 784
SacI GAGCTC 1 cut(s) 426
SapI GCTCTTC 1 cut(s) 639
SaqAI TTAA 4 cut(s) 50, 180, 503, 579
SatI GCNGC 3 cut(s) 134, 453, 790
Sau3AI GATC 2 cut(s) 373, 701
Sau96I GGNCC 1 cut(s) 857
SchI GAGTC 2 cut(s) 823, 953
SduI GDGCHC 2 cut(s) 426, 529
SfaNI GCATC 1 cut(s) 642
SfcI CTRYAG 2 cut(s) 322, 544
Sfr274I CTCGAG 1 cut(s) 831
SfuI TTCGAA 1 cut(s) 585
SinI GGWCC 1 cut(s) 857
SlaI CTCGAG 1 cut(s) 831
SmiMI CAYNNNNRTG 2 cut(s) 381, 784
SmlI CTYRAG 1 cut(s) 831
SmoI CTYRAG 1 cut(s) 831
Sse9I AATT 7 cut(s) 72, 175, 246, 369, 476, 588, 820
SseBI AGGCCT 1 cut(s) 550
SsiI CCGC 5 cut(s) 471, 790, 812, 873, 951
SspMI CTAG 4 cut(s) 303, 716, 882, 955
SstI GAGCTC 1 cut(s) 426
StuI AGGCCT 1 cut(s) 550
StyI CCWWGG 5 cut(s) 90, 112, 223, 261, 773
TaaI ACNGT 2 cut(s) 545, 648
TaqI TCGA 6 cut(s) 236, 408, 585, 650, 827, 832
TasI AATT 7 cut(s) 72, 175, 246, 369, 476, 588, 820
TauI GCSGC 1 cut(s) 792
TfiI GAWTC 1 cut(s) 170
Tru1I TTAA 4 cut(s) 50, 180, 503, 579
Tru9I TTAA 4 cut(s) 50, 180, 503, 579
TseFI GTSAC 2 cut(s) 665, 928
TseI GCWGC 2 cut(s) 133, 452
Tsp45I GTSAC 2 cut(s) 665, 928
TspDTI ATGAA 2 cut(s) 51, 399
TspGWI ACGGA 2 cut(s) 293, 870
VpaK11BI GGWCC 1 cut(s) 857
XapI RAATTY 2 cut(s) 476, 588
XcmI CCANNNNNNNNNTGG 3 cut(s) 13, 268, 860
XhoI CTCGAG 1 cut(s) 831
XmiI GTMKAC 1 cut(s) 219
XspI CTAG 4 cut(s) 303, 716, 882, 955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.