Rmu_sc0005728.1_g000005

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005728.1
Physical Location & Seq
Reverse (-)
13240 .. 15333
2094 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005728.1_g000005.1.cds

Sequence Viewer

Length: 2094 bp
atggctgtccataaacaagtacaatttcttcttctcttcactctgtttacccctttcgcaacaccactaaccttcaatttctccaccttccccaatgacaccacctctttgttcatagaaggagatgcttataccgacggcaaactcctccggctcaccaaaagcgccagagaacctaaagtggctggcaacgttggtcgagccacgtacagtcaaccattcctcctgcggggggaagtctccggaaaacttaaacttgcagacttcaccacgcactttacgtttgtcattgattctcaaggcaacaaaacctatggcgatgggtttgcgttcttcctggcgccaaaaggatccttactcaacagtgcattaggaggtggcggcaagcttggcctccccgtcgcagaccttccgggagggaatgagtacccgtttgtggcagtggagtttgatatctatcagaatccactgccaagctacatcgaccctcaatacgatcacgtgggggtcgatgtcaacaatctcaggtctaatattaccatggcttggtctggagatattccgaatgcaaaaatcaacagtgcttcgattagttataactctagctcaaaaactcttagtgttgcatacaccacttttgtgaatgatacagctggtatccaaaagcaagtgatcagatatcttaattacgtggttgatctgaaacagtacttgcccgattgggtaattgttgggttctctgctgcaaccggtgataggattgctttgtccgagatcatctcatggaatttcacttcgacttctgtcgttgatgagattgttcatgcgacagacactgcaccagcaacacggaaccctgatacagttgaacaaaagtcaagaaataacaatataccacgaattgctgtggggctaggtgttggtggaagtatattggtggcggggttggctttggtttggttcatctttcggaggaagaggcaagcacttaaaaatgatgaacgttctatggtggtactcaatgacgagttcgaaaggggaacaggccccaggaagtttttgtacagcgagttggctagagccacgagtaattttgatgaaggggacaagcttggagagggaggatttggtggagtctatagaggattcataaaagacttgaacacatatgttgctgttaagagggtctccaagggatccaaacaagggctaaaggagtacgcagccgaagtcaggatcatcggtcaacttagacatcgaaaccttgtgcaactcattggttggtgtcacgaaaacggagatctcctacttgtgtatgagtttatgccccacggcagtttagattcttatttgttcaaagaagaaggcttcttgaattgggaggtaagatacaaaattgctcttggcttggccagcggtgttctttatctacacgaaggatgcgaacaatgtatactgcacagagatatcaaatcaagcaatgttatgttggatttgaatttcaacgtaaaacttggagatttcggcctagctagacttgtggagcacgaaaaaggatcgctaacaacgattgtggctggaactaggggctacatggctcttgattatgttgtcacaggcaaggctaacaaggagtcagatgtctatagcttcggagttgttgctttggaaatagcttgtgggagaagatccatggatttcgatttggaaagtaagaggatcaacttagtggagtgggtgtggcagctttatggagaagagagacttattgaagcagctgacccaaaattgtgtggagattttgatgagaaacaaatcgagtgtttgatgattgttgggctctggtgtgctcacccagactataatttcagacctccaatactacaagcgattcaagtgcttaacttcaaggaacaattgcccattctcccagcaatcatgccaatggccccttcttttgctcgtccagttcgggcattgagtgatactattagtggttctgaaataggtctttctaagtcttcaaatagtgacagcaccaattcctcaaagttggcttcatcttctgcaaattatcagtcatcacctctttga

Protein Analysis

697

Amino Acids

76.98

Weight (kDa)

6.07

Isoelectric Point (pI)

34.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AccB1I GGYRCC 1 cut(s) 340
AccB7I CCANNNNNTGG 1 cut(s) 546
AccI GTMKAC 1 cut(s) 1453
AccIII TCCGGA 1 cut(s) 242
AciI CCGC 4 cut(s) 229, 381, 941, 1416
AclI AACGTT 2 cut(s) 192, 1003
AclWI GGATC 8 cut(s) 345, 358, 1191, 1204, 1244, 1564, 1683, 1727
AcoI YGGCCR 1 cut(s) 1410
AcsI RAATTY 2 cut(s) 787, 1498
AcvI CACGTG 1 cut(s) 502
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 7 cut(s) 21, 209, 428, 710, 1017, 1064, 1220
AfiI CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 756, 1206, 1233
AgeI ACCGGT 1 cut(s) 749
AjnI CCWGG 2 cut(s) 336, 1049
AjuI GAANNNNNNNTTGG 2 cut(s) 1936, 1968
AleI CACNNNNGTG 1 cut(s) 638
Alw21I GWGCWC 2 cut(s) 1548, 1852
Alw26I GTCTC 3 cut(s) 244, 1192, 1756
AlwI GGATC 8 cut(s) 345, 358, 1191, 1204, 1244, 1564, 1683, 1727
AlwNI CAGNNNCTG 1 cut(s) 836
Aor13HI TCCGGA 1 cut(s) 242
AoxI GGCC 5 cut(s) 391, 1045, 1410, 1525, 1947
ApeKI GCWGC 4 cut(s) 743, 1223, 1744, 1775
ApoI RAATTY 2 cut(s) 787, 1498
ArsI GACNNNNNNTTYG 1 cut(s) 2063
AsiGI ACCGGT 1 cut(s) 749
AspLEI GCGC 2 cut(s) 167, 343
AspS9I GGNCC 2 cut(s) 1046, 1948
AsuC2I CCSGG 1 cut(s) 414
AsuHPI GGTGA 5 cut(s) 148, 259, 764, 1844, 2076
AsuII TTCGAA 1 cut(s) 1032
BalI TGGCCA 1 cut(s) 1412
BamHI GGATCC 2 cut(s) 350, 1196
BanI GGYRCC 1 cut(s) 340
BanII GRGCYC 1 cut(s) 1842
BarI GAAGNNNNNNTAC 4 cut(s) 12, 44, 1046, 1078
BauI CACGAG 1 cut(s) 1084
BbrPI CACGTG 1 cut(s) 502
BbsI GAAGAC 1 cut(s) 2013
Bbv12I GWGCWC 2 cut(s) 1548, 1852
BbvI GCAGC 4 cut(s) 730, 1235, 1756, 1787
BccI CCATC 1 cut(s) 314
BceAI ACGGC 2 cut(s) 154, 1348
BcgI CGANNNNNNTGC 4 cut(s) 308, 342, 1879, 1913
BciT130I CCWGG 2 cut(s) 338, 1051
BciVI GTATCC 1 cut(s) 668
BclI TGATCA 1 cut(s) 672
BcnI CCSGG 1 cut(s) 414
BcoDI GTCTC 3 cut(s) 244, 1192, 1756
BfaI CTAG 6 cut(s) 603, 914, 1077, 1529, 1533, 1584
BfmI CTRYAG 2 cut(s) 1138, 1645
BfoI RGCGCY 2 cut(s) 168, 344
BfuI GTATCC 1 cut(s) 668
BglII AGATCT 1 cut(s) 1300
BisI GCNGC 5 cut(s) 382, 744, 1224, 1745, 1776
BlsI GCNGC 5 cut(s) 383, 745, 1225, 1746, 1777
BmcAI AGTACT 1 cut(s) 710
Bme1390I CCNGG 3 cut(s) 338, 414, 1051
BmgT120I GGNCC 2 cut(s) 1046, 1948
BmiI GGNNCC 6 cut(s) 342, 352, 854, 1048, 1198, 1950
BmrFI CCNGG 3 cut(s) 338, 414, 1051
BmsI GCATC 2 cut(s) 115, 1430
BoxI GACNNNNGTC 1 cut(s) 803
BpiI GAAGAC 1 cut(s) 2013
BplI GAGNNNNNCTC 2 cut(s) 764, 796
BpmI CTGGAG 1 cut(s) 573
Bpu14I TTCGAA 1 cut(s) 1032
BpuEI CTTGAG 1 cut(s) 282
BpuMI CCSGG 1 cut(s) 414
BsaAI YACGTR 3 cut(s) 207, 502, 691
BsaBI GATNNNNATC 1 cut(s) 456
BsaHI GRCGYC 1 cut(s) 341
BsaI GGTCTC 1 cut(s) 1192
BsaJI CCNNGG 5 cut(s) 540, 1049, 1191, 1330, 1692
BsaWI WCCGGW 2 cut(s) 242, 749
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 1724, 1754
Bsc4I CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 756, 1206, 1233
Bse118I RCCGGY 1 cut(s) 749
Bse1I ACTGG 1 cut(s) 1967
Bse3DI GCAATG 1 cut(s) 1486
Bse8I GATNNNNATC 1 cut(s) 456
BseAI TCCGGA 1 cut(s) 242
BseBI CCWGG 2 cut(s) 338, 1051
BseDI CCNNGG 5 cut(s) 540, 1049, 1191, 1330, 1692
BseGI GGATG 1 cut(s) 1445
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 756, 1206, 1233
BseMI GCAATG 1 cut(s) 1486
BseMII CTCAG 1 cut(s) 538
BseNI ACTGG 1 cut(s) 1967
BseRI GAGGAG 1 cut(s) 137
BseXI GCAGC 4 cut(s) 730, 1235, 1756, 1787
BseYI CCCAGC 1 cut(s) 1930
BsgI GTGCAG 2 cut(s) 822, 1442
BshFI GGCC 5 cut(s) 393, 1047, 1412, 1527, 1949
BshNI GGYRCC 1 cut(s) 340
BshTI ACCGGT 1 cut(s) 749
BsiHKAI GWGCWC 2 cut(s) 1548, 1852
BsiSI CCGG 4 cut(s) 151, 243, 413, 750
BslFI GGGAC 1 cut(s) 1118
BslI CCNNNNNNNGG 7 cut(s) 229, 232, 436, 546, 756, 1206, 1233
BsmAI GTCTC 3 cut(s) 244, 1192, 1756
BsmFI GGGAC 1 cut(s) 1118
BsmI GAATGC 1 cut(s) 571
BsnI GGCC 5 cut(s) 393, 1047, 1412, 1527, 1949
Bso31I GGTCTC 1 cut(s) 1192
Bsp119I TTCGAA 1 cut(s) 1032
Bsp1286I GDGCHC 3 cut(s) 1548, 1842, 1852
Bsp13I TCCGGA 1 cut(s) 242
Bsp1407I TGTACA 1 cut(s) 1062
Bsp19I CCATGG 2 cut(s) 540, 1692
BspACI CCGC 4 cut(s) 229, 381, 941, 1416
BspANI GGCC 5 cut(s) 393, 1047, 1412, 1527, 1949
BspCNI CTCAG 1 cut(s) 537
BspEI TCCGGA 1 cut(s) 242
BspLI GGNNCC 6 cut(s) 342, 352, 854, 1048, 1198, 1950
BspPI GGATC 8 cut(s) 345, 358, 1191, 1204, 1244, 1564, 1683, 1727
BspT104I TTCGAA 1 cut(s) 1032
BspT107I GGYRCC 1 cut(s) 340
BspTNI GGTCTC 1 cut(s) 1192
BsrDI GCAATG 1 cut(s) 1486
BsrFI RCCGGY 1 cut(s) 749
BsrGI TGTACA 1 cut(s) 1062
BsrI ACTGG 1 cut(s) 1967
BssAI RCCGGY 1 cut(s) 749
BssECI CCNNGG 5 cut(s) 540, 1049, 1191, 1330, 1692
BssNAI GTATAC 1 cut(s) 1454
BssNI GRCGYC 1 cut(s) 341
BssSI CACGAG 1 cut(s) 1084
BssT1I CCWWGG 3 cut(s) 540, 1191, 1692
Bst1107I GTATAC 1 cut(s) 1454
Bst2BI CACGAG 1 cut(s) 1084
Bst2UI CCWGG 2 cut(s) 338, 1051
Bst4CI ACNGT 5 cut(s) 212, 365, 581, 708, 865
Bst6I CTCTTC 3 cut(s) 41, 971, 1752
BstACI GRCGYC 1 cut(s) 341
BstAUI TGTACA 1 cut(s) 1062
BstBAI YACGTR 3 cut(s) 207, 502, 691
BstBI TTCGAA 1 cut(s) 1032
BstC8I GCNNGC 4 cut(s) 187, 386, 984, 1414
BstDEI CTNAG 5 cut(s) 524, 617, 1250, 1726, 2016
BstDSI CCRYGG 3 cut(s) 540, 1330, 1692
BstF5I GGATG 1 cut(s) 1445
BstH2I RGCGCY 2 cut(s) 168, 344
BstHHI GCGC 2 cut(s) 167, 343
BstMAI GTCTC 3 cut(s) 244, 1192, 1756
BstMWI GCNNNNNNNGC 3 cut(s) 390, 947, 1413
BstNI CCWGG 2 cut(s) 338, 1051
BstPAI GACNNNNGTC 1 cut(s) 803
BstSCI CCNGG 3 cut(s) 336, 412, 1049
BstSFI CTRYAG 2 cut(s) 1138, 1645
BstV1I GCAGC 4 cut(s) 730, 1235, 1756, 1787
BstV2I GAAGAC 1 cut(s) 2013
BstX2I RGATCY 4 cut(s) 350, 1196, 1300, 1688
BstYI RGATCY 4 cut(s) 350, 1196, 1300, 1688
BstZ17I GTATAC 1 cut(s) 1454
BsuI GTATCC 1 cut(s) 668
BsuRI GGCC 5 cut(s) 393, 1047, 1412, 1527, 1949
BtgI CCRYGG 3 cut(s) 540, 1330, 1692
BtgZI GCGATG 1 cut(s) 333
BtsCI GGATG 1 cut(s) 1445
BtsI GCAGTG 3 cut(s) 447, 467, 834
BtsIMutI CAGTG 5 cut(s) 370, 447, 467, 586, 834
Cac8I GCNNGC 4 cut(s) 187, 386, 984, 1414
CaiI CAGNNNCTG 1 cut(s) 836
CfoI GCGC 2 cut(s) 167, 343
Cfr10I RCCGGY 1 cut(s) 749
Cfr13I GGNCC 2 cut(s) 1046, 1948
Csp6I GTAC 7 cut(s) 20, 208, 427, 709, 1016, 1063, 1219
CspAI ACCGGT 1 cut(s) 749
CspCI CAANNNNNGTGG 2 cut(s) 1554, 1589
CviAII CATG 6 cut(s) 541, 783, 824, 1594, 1693, 1939
CviQI GTAC 7 cut(s) 20, 208, 427, 709, 1016, 1063, 1219
DdeI CTNAG 5 cut(s) 524, 617, 1250, 1726, 2016
DinI GGCGCC 1 cut(s) 342
EaeI YGGCCR 1 cut(s) 1410
Eam1104I CTCTTC 3 cut(s) 41, 971, 1752
EarI CTCTTC 3 cut(s) 41, 971, 1752
Eco130I CCWWGG 3 cut(s) 540, 1191, 1692
Eco24I GRGCYC 1 cut(s) 1842
Eco31I GGTCTC 1 cut(s) 1192
Eco32I GATATC 3 cut(s) 454, 680, 1468
Eco72I CACGTG 1 cut(s) 502
EcoO109I RGGNCCY 1 cut(s) 1046
EcoRII CCWGG 2 cut(s) 336, 1049
EcoRV GATATC 3 cut(s) 454, 680, 1468
EcoT14I CCWWGG 3 cut(s) 540, 1191, 1692
EcoT38I GRGCYC 1 cut(s) 1842
EgeI GGCGCC 1 cut(s) 342
EheI GGCGCC 1 cut(s) 342
ErhI CCWWGG 3 cut(s) 540, 1191, 1692
FaeI CATG 6 cut(s) 544, 786, 827, 1597, 1696, 1942
FalI AAGNNNNNCTT 2 cut(s) 1749, 1781
FaqI GGGAC 1 cut(s) 1118
FatI CATG 6 cut(s) 540, 782, 823, 1593, 1692, 1938
FauI CCCGC 2 cut(s) 222, 934
FauNDI CATATG 1 cut(s) 1168
FbaI TGATCA 1 cut(s) 672
FblI GTMKAC 1 cut(s) 1453
Fnu4HI GCNGC 5 cut(s) 382, 744, 1224, 1745, 1776
FokI GGATG 1 cut(s) 1452
FriOI GRGCYC 1 cut(s) 1842
Fsp4HI GCNGC 5 cut(s) 382, 744, 1224, 1745, 1776
FspBI CTAG 6 cut(s) 603, 914, 1077, 1529, 1533, 1584
GlaI GCGC 2 cut(s) 166, 342
GluI GCNGC 5 cut(s) 382, 744, 1224, 1745, 1776
GsaI CCCAGC 1 cut(s) 1934
GsuI CTGGAG 1 cut(s) 573
HaeII RGCGCY 2 cut(s) 168, 344
HaeIII GGCC 5 cut(s) 393, 1047, 1412, 1527, 1949
HapII CCGG 4 cut(s) 151, 243, 413, 750
HhaI GCGC 2 cut(s) 167, 343
Hin1I GRCGYC 1 cut(s) 341
Hin1II CATG 6 cut(s) 544, 786, 827, 1597, 1696, 1942
Hin6I GCGC 2 cut(s) 165, 341
HinP1I GCGC 2 cut(s) 165, 341
HincII GTYRAC 3 cut(s) 215, 517, 1247
HindII GTYRAC 3 cut(s) 215, 517, 1247
HindIII AAGCTT 2 cut(s) 386, 1109
HinfI GANTC 7 cut(s) 293, 463, 1134, 1146, 1343, 1634, 1891
HpaII CCGG 4 cut(s) 151, 243, 413, 750
HphI GGTGA 5 cut(s) 148, 259, 764, 1844, 2076
Hpy166II GTNNAC 5 cut(s) 48, 215, 517, 1247, 1454
Hpy188III TCNNGA 7 cut(s) 243, 552, 879, 1234, 1289, 1372, 1601
Hpy8I GTNNAC 5 cut(s) 48, 215, 517, 1247, 1454
Hpy99I CGWCG 2 cut(s) 140, 404
HpyAV CCTTC 8 cut(s) 82, 97, 113, 419, 1094, 1358, 1430, 1962
HpyCH4III ACNGT 5 cut(s) 212, 365, 581, 708, 865
HpyCH4IV ACGT 7 cut(s) 192, 206, 281, 501, 690, 1003, 1506
HpyCH4V TGCA 9 cut(s) 260, 368, 569, 626, 746, 839, 1270, 1459, 2069
HpyF10VI GCNNNNNNNGC 3 cut(s) 390, 947, 1413
HpyF3I CTNAG 5 cut(s) 524, 617, 1250, 1726, 2016
HpySE526I ACGT 7 cut(s) 192, 206, 281, 501, 690, 1003, 1506
Hsp92I GRCGYC 1 cut(s) 341
Hsp92II CATG 6 cut(s) 544, 786, 827, 1597, 1696, 1942
HspAI GCGC 2 cut(s) 165, 341
KasI GGCGCC 1 cut(s) 340
Kpn2I TCCGGA 1 cut(s) 242
Ksp22I TGATCA 1 cut(s) 672
LmnI GCTCC 1 cut(s) 1543
Lsp1109I GCAGC 4 cut(s) 730, 1235, 1756, 1787
LweI GCATC 2 cut(s) 115, 1430
MaeI CTAG 6 cut(s) 603, 914, 1077, 1529, 1533, 1584
MaeII ACGT 7 cut(s) 192, 206, 281, 501, 690, 1003, 1506
MaeIII GTNAC 3 cut(s) 1286, 1612, 2030
MfeI CAATTG 1 cut(s) 1916
MflI RGATCY 4 cut(s) 350, 1196, 1300, 1688
MhlI GDGCHC 3 cut(s) 1548, 1842, 1852
MlsI TGGCCA 1 cut(s) 1412
MluNI TGGCCA 1 cut(s) 1412
Mly113I GGCGCC 1 cut(s) 341
MlyI GAGTC 2 cut(s) 1143, 1643
MmeI TCCRAC 1 cut(s) 1470
Mox20I TGGCCA 1 cut(s) 1412
MroI TCCGGA 1 cut(s) 242
MscI TGGCCA 1 cut(s) 1412
MseI TTAA 5 cut(s) 252, 684, 990, 1179, 1902
MslI CAYNNNNRTG 2 cut(s) 638, 1943
Msp20I TGGCCA 1 cut(s) 1412
MspA1I CMGCKG 3 cut(s) 653, 1416, 1778
MspI CCGG 4 cut(s) 151, 243, 413, 750
MspR9I CCNGG 3 cut(s) 338, 414, 1051
MunI CAATTG 1 cut(s) 1916
Mva1269I GAATGC 1 cut(s) 571
MvaI CCWGG 2 cut(s) 338, 1051
MwoI GCNNNNNNNGC 3 cut(s) 390, 947, 1413
NarI GGCGCC 1 cut(s) 341
NciI CCSGG 1 cut(s) 414
NcoI CCATGG 2 cut(s) 540, 1692
NdeI CATATG 1 cut(s) 1168
NlaIII CATG 6 cut(s) 544, 786, 827, 1597, 1696, 1942
NlaIV GGNNCC 6 cut(s) 342, 352, 854, 1048, 1198, 1950
NmuCI GTSAC 3 cut(s) 1286, 1612, 2030
NspV TTCGAA 1 cut(s) 1032
OliI CACNNNNGTG 1 cut(s) 638
PcsI WCGNNNNNNNCGW 4 cut(s) 278, 507, 1440, 1565
PctI GAATGC 1 cut(s) 571
PfeI GAWTC 5 cut(s) 293, 463, 1146, 1343, 1891
PflMI CCANNNNNTGG 1 cut(s) 546
PfoI TCCNGGA 1 cut(s) 412
PinAI ACCGGT 1 cut(s) 749
PkrI GCNGC 5 cut(s) 383, 745, 1225, 1746, 1777
PleI GAGTC 2 cut(s) 1142, 1642
PluTI GGCGCC 1 cut(s) 344
PmaCI CACGTG 1 cut(s) 502
PmlI CACGTG 1 cut(s) 502
PpsI GAGTC 2 cut(s) 1142, 1642
Ppu21I YACGTR 3 cut(s) 207, 502, 691
PshAI GACNNNNGTC 1 cut(s) 803
PsiI TTATAA 1 cut(s) 597
Psp1406I AACGTT 2 cut(s) 192, 1003
Psp6I CCWGG 2 cut(s) 336, 1049
PspCI CACGTG 1 cut(s) 502
PspFI CCCAGC 1 cut(s) 1930
PspGI CCWGG 2 cut(s) 336, 1049
PspN4I GGNNCC 6 cut(s) 342, 352, 854, 1048, 1198, 1950
PspPI GGNCC 2 cut(s) 1046, 1948
PsrI GAACNNNNNNTAC 2 cut(s) 1437, 1469
PstNI CAGNNNCTG 1 cut(s) 836
PsuI RGATCY 4 cut(s) 350, 1196, 1300, 1688
PvuII CAGCTG 2 cut(s) 653, 1778
RsaI GTAC 7 cut(s) 21, 209, 428, 710, 1017, 1064, 1220
RsaNI GTAC 7 cut(s) 20, 208, 427, 709, 1016, 1063, 1219
RseI CAYNNNNRTG 2 cut(s) 638, 1943
SaqAI TTAA 5 cut(s) 252, 684, 990, 1179, 1902
SatI GCNGC 5 cut(s) 382, 744, 1224, 1745, 1776
Sau96I GGNCC 2 cut(s) 1046, 1948
ScaI AGTACT 1 cut(s) 710
SchI GAGTC 2 cut(s) 1143, 1643
ScrFI CCNGG 3 cut(s) 338, 414, 1051
SduI GDGCHC 3 cut(s) 1548, 1842, 1852
SfaNI GCATC 2 cut(s) 115, 1430
SfcI CTRYAG 2 cut(s) 1138, 1645
SfoI GGCGCC 1 cut(s) 342
SfuI TTCGAA 1 cut(s) 1032
SmiMI CAYNNNNRTG 2 cut(s) 638, 1943
SmlI CTYRAG 1 cut(s) 297
SmoI CTYRAG 1 cut(s) 297
SsiI CCGC 4 cut(s) 229, 381, 941, 1416
SspDI GGCGCC 1 cut(s) 340
SspI AATATT 1 cut(s) 535
SspMI CTAG 6 cut(s) 603, 914, 1077, 1529, 1533, 1584
StyD4I CCNGG 3 cut(s) 336, 412, 1049
StyI CCWWGG 3 cut(s) 540, 1191, 1692
TaaI ACNGT 5 cut(s) 212, 365, 581, 708, 865
TaiI ACGT 7 cut(s) 195, 209, 284, 504, 693, 1006, 1509
TaqI TCGA 9 cut(s) 199, 483, 510, 587, 797, 1032, 1258, 1701, 1818
TaqII GACCGA 1 cut(s) 1232
TatI WGTACW 3 cut(s) 19, 708, 1062
TauI GCSGC 1 cut(s) 384
TfiI GAWTC 5 cut(s) 293, 463, 1146, 1343, 1891
Tru1I TTAA 5 cut(s) 252, 684, 990, 1179, 1902
Tru9I TTAA 5 cut(s) 252, 684, 990, 1179, 1902
TscAI CASTG 5 cut(s) 370, 447, 474, 586, 841
TseFI GTSAC 3 cut(s) 1286, 1612, 2030
TseI GCWGC 4 cut(s) 743, 1223, 1744, 1775
Tsp45I GTSAC 3 cut(s) 1286, 1612, 2030
TspDTI ATGAA 7 cut(s) 103, 812, 952, 1014, 1113, 1138, 2049
TspGWI ACGGA 2 cut(s) 865, 1311
TspRI CASTG 5 cut(s) 370, 447, 474, 586, 841
Van91I CCANNNNNTGG 1 cut(s) 546
XapI RAATTY 2 cut(s) 787, 1498
XmiI GTMKAC 1 cut(s) 1453
XspI CTAG 6 cut(s) 603, 914, 1077, 1529, 1533, 1584
ZrmI AGTACT 1 cut(s) 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.