Rh5CG252200

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
26576070 .. 26578641
2572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG252200.1

Sequence Viewer

Length: 1203 bp
ATGACACTAGAGTTCTCCCACAAGCAGCTTCAATGCTTCGTTTTTCTTCTCTTGATCTCCTCTGCAACTTCATTGACCTTTGATTTCCCTAGTTTCAGTAGCAATGATACCAACACAGTATTTCTAGAGGGAGACGCTTATATCCGCAACCAATCCATCAACCTCTGCATCATAAACACAACCGGTAGCAGCATTGGTCGAGCCAGTTACAGTGAACCCTTCCTCCTCCGAGAAAACAGCACCGGAAAACTGGCCGACTTCACCACAAACTTCACATTCAACATCGAACTGCCAAACAAAACAAGATATGCAGATGGGATGGTTTTCTTCCTCGCACCGAACGGATCCAAGCTCAACCGCAAACAAGGAGGTGGAGGCAGTCTCGGCCTCCCCTTCGACGACCCCATCACAGCAGCCTCAAAGAATGCGTTCGCCTTTGTCGCCGTGGAGTTCGATATCTATTACAATCCTGAGTATTCCATAGAGGATCCAGCCTACCCTCATCTGGGTATCGACGTCAATACTCTCAAGTCAAACGTGACAGCACCTTGGAATGGAAGTCTTCCGGATGGAAGAAACAATAGTGCTTGGATCAGTTATAGTTCTGGCACCAAAAATCTTAGTGTTGCCTTCACTAATTATGTGAATGGTACCCAAGAGATTAATTACCTCAGTTACACCGTTGATCTCAATCAATACTTGCCTGATTCAGTCATTGTTGGGTTCTCCGCTGCCACTGGTGTTCGTATTGCTCTACCCAAGATACATTCATGGAGTTTTAGTTCTTCATTAGTCCTCCCACCGCCAAGAGTCAGTACTAATCCCAAGTCAGGAAAGAACAAAATAGGACTAACGGTGGGGTTGAGTGTTGGTGGAGGTGCTATCTTGGTAAGCGGGTTAGGGTTGATTTGGTTGTTCATGGGCAAGAAGAGGGGAGGAGGAGAAGGAAGTGATGAGGATCTCGTACTTCGCCACTTCATTGATGAGGAGTTTGAAAGAGGAACAGGTCCACGGAAGTTTTCCTACAATGAGTTGGCCCAAGCGACAAATAATTTTGAGGAGGGAGGGAAGCTTGCAGAGGGAGGGTTTGGTGGTGTATACAGAGGCTTCATAAAAGACTTGAATTCCTATGTTGCTGTCAAGAAGATATCAAGTGGGTCTAAACAAGGACTGAAGGATGGGACTCGGGAGCATGCAAATTGA

Protein Analysis

400

Amino Acids

43.38

Weight (kDa)

6.25

Isoelectric Point (pI)

28.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 25 - 264 1.8e-59 Legume lectin domain
Lectin_L-type_dom PF18483 42 - 252 2.7e-12 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 519
Acc65I GGTACC 1 cut(s) 650
AccB1I GGYRCC 2 cut(s) 608, 650
AccI GTMKAC 1 cut(s) 1098
AccIII TCCGGA 1 cut(s) 565
AciI CCGC 5 cut(s) 145, 358, 729, 803, 894
AclWI GGATC 6 cut(s) 339, 352, 482, 495, 599, 966
AcoI YGGCCR 1 cut(s) 252
AcsI RAATTY 1 cut(s) 1123
AcuI CTGAAG 1 cut(s) 1193
AcyI GRCGYC 1 cut(s) 516
AfaI GTAC 3 cut(s) 652, 817, 966
AfiI CCNNNNNNNGG 4 cut(s) 505, 506, 554, 830
AgeI ACCGGT 1 cut(s) 182
AgsI TTSAA 4 cut(s) 32, 280, 995, 1123
AloI GAACNNNNNNTCC 4 cut(s) 207, 239, 766, 798
AluBI AGCT 3 cut(s) 28, 352, 1072
AluI AGCT 3 cut(s) 28, 352, 1072
Alw26I GTCTC 2 cut(s) 126, 386
AlwI GGATC 6 cut(s) 339, 352, 482, 495, 599, 966
Ama87I CYCGRG 1 cut(s) 1185
Aor13HI TCCGGA 1 cut(s) 565
AoxI GGCC 3 cut(s) 252, 385, 1035
ApeKI GCWGC 4 cut(s) 25, 189, 413, 731
ApoI RAATTY 1 cut(s) 1123
AseI ATTAAT 1 cut(s) 663
AsiGI ACCGGT 1 cut(s) 182
Asp700I GAANNNNTTC 1 cut(s) 428
Asp718I GGTACC 1 cut(s) 650
AspS9I GGNCC 2 cut(s) 1007, 1036
AsuHPI GGTGA 1 cut(s) 253
AvaI CYCGRG 1 cut(s) 1185
AvaII GGWCC 1 cut(s) 1007
BamHI GGATCC 2 cut(s) 344, 487
BanI GGYRCC 2 cut(s) 608, 650
BarI GAAGNNNNNNTAC 2 cut(s) 1007, 1039
BbsI GAAGAC 1 cut(s) 554
BbvI GCAGC 4 cut(s) 37, 201, 425, 718
BccI CCATC 6 cut(s) 164, 308, 313, 413, 563, 1172
BceAI ACGGC 1 cut(s) 428
BcoDI GTCTC 2 cut(s) 126, 386
BfaI CTAG 3 cut(s) 8, 90, 125
BisI GCNGC 4 cut(s) 26, 190, 414, 732
BlsI GCNGC 4 cut(s) 27, 191, 415, 733
BmcAI AGTACT 1 cut(s) 817
Bme18I GGWCC 1 cut(s) 1007
BmeT110I CYCGRG 1 cut(s) 1185
BmgT120I GGNCC 2 cut(s) 1007, 1036
BmiI GGNNCC 4 cut(s) 346, 489, 610, 652
BmsI GCATC 1 cut(s) 177
BpiI GAAGAC 1 cut(s) 554
BplI GAGNNNNNCTC 2 cut(s) 366, 398
BpuEI CTTGAG 1 cut(s) 512
BsaBI GATNNNNATC 2 cut(s) 690, 957
BsaHI GRCGYC 1 cut(s) 516
BsaJI CCNNGG 3 cut(s) 444, 548, 1010
BsaWI WCCGGW 3 cut(s) 182, 242, 565
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 766, 796
Bsc4I CCNNNNNNNGG 4 cut(s) 505, 506, 554, 830
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 3 cut(s) 204, 255, 742
Bse3DI GCAATG 1 cut(s) 109
Bse8I GATNNNNATC 2 cut(s) 690, 957
BseAI TCCGGA 1 cut(s) 565
BseDI CCNNGG 3 cut(s) 444, 548, 1010
BseGI GGATG 3 cut(s) 324, 574, 1183
BseJI GATNNNNATC 2 cut(s) 690, 957
BseLI CCNNNNNNNGG 4 cut(s) 505, 506, 554, 830
BseMI GCAATG 1 cut(s) 109
BseMII CTCAG 2 cut(s) 462, 685
BseNI ACTGG 3 cut(s) 204, 255, 742
BseRI GAGGAG 6 cut(s) 49, 215, 951, 954, 1001, 1073
BseXI GCAGC 4 cut(s) 37, 201, 425, 718
BshFI GGCC 3 cut(s) 254, 387, 1037
BshNI GGYRCC 2 cut(s) 608, 650
BshTI ACCGGT 1 cut(s) 182
BsiHKCI CYCGRG 1 cut(s) 1185
BsiSI CCGG 3 cut(s) 183, 243, 566
BslFI GGGAC 1 cut(s) 1195
BslI CCNNNNNNNGG 4 cut(s) 505, 506, 554, 830
BsmAI GTCTC 2 cut(s) 126, 386
BsmBI CGTCTC 1 cut(s) 126
BsmFI GGGAC 1 cut(s) 1195
BsmI GAATGC 1 cut(s) 430
BsnI GGCC 3 cut(s) 254, 387, 1037
BsoBI CYCGRG 1 cut(s) 1185
Bsp13I TCCGGA 1 cut(s) 565
Bsp143I GATC 6 cut(s) 54, 344, 487, 591, 685, 958
BspACI CCGC 5 cut(s) 145, 358, 729, 803, 894
BspANI GGCC 3 cut(s) 254, 387, 1037
BspCNI CTCAG 2 cut(s) 463, 684
BspEI TCCGGA 1 cut(s) 565
BspLI GGNNCC 4 cut(s) 346, 489, 610, 652
BspPI GGATC 6 cut(s) 339, 352, 482, 495, 599, 966
BspT107I GGYRCC 2 cut(s) 608, 650
BsrDI GCAATG 1 cut(s) 109
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 3 cut(s) 204, 255, 742
BssAI RCCGGY 1 cut(s) 182
BssECI CCNNGG 3 cut(s) 444, 548, 1010
BssMI GATC 6 cut(s) 54, 344, 487, 591, 685, 958
BssNAI GTATAC 1 cut(s) 1099
BssNI GRCGYC 1 cut(s) 516
BssT1I CCWWGG 1 cut(s) 548
Bst1107I GTATAC 1 cut(s) 1099
Bst4CI ACNGT 4 cut(s) 118, 212, 682, 856
Bst6I CTCTTC 1 cut(s) 923
BstACI GRCGYC 1 cut(s) 516
BstC8I GCNNGC 2 cut(s) 1074, 1194
BstDEI CTNAG 3 cut(s) 471, 620, 671
BstDSI CCRYGG 2 cut(s) 444, 1010
BstF5I GGATG 3 cut(s) 324, 574, 1183
BstKTI GATC 6 cut(s) 57, 347, 490, 594, 688, 961
BstMAI GTCTC 2 cut(s) 126, 386
BstMBI GATC 6 cut(s) 54, 344, 487, 591, 685, 958
BstMWI GCNNNNNNNGC 2 cut(s) 384, 440
BstNSI RCATGY 1 cut(s) 1196
BstV1I GCAGC 4 cut(s) 37, 201, 425, 718
BstV2I GAAGAC 1 cut(s) 554
BstX2I RGATCY 3 cut(s) 344, 487, 958
BstYI RGATCY 3 cut(s) 344, 487, 958
BstZ17I GTATAC 1 cut(s) 1099
BsuRI GGCC 3 cut(s) 254, 387, 1037
BtgI CCRYGG 2 cut(s) 444, 1010
BtsCI GGATG 3 cut(s) 324, 574, 1183
BtsIMutI CAGTG 2 cut(s) 217, 735
Cac8I GCNNGC 2 cut(s) 1074, 1194
Cfr10I RCCGGY 1 cut(s) 182
Cfr13I GGNCC 2 cut(s) 1007, 1036
CseI GACGC 1 cut(s) 143
Csp6I GTAC 3 cut(s) 651, 816, 965
CspAI ACCGGT 1 cut(s) 182
CviAII CATG 3 cut(s) 771, 919, 1193
CviQI GTAC 3 cut(s) 651, 816, 965
DdeI CTNAG 3 cut(s) 471, 620, 671
DpnI GATC 6 cut(s) 56, 346, 489, 593, 687, 960
DpnII GATC 6 cut(s) 54, 344, 487, 591, 685, 958
EaeI YGGCCR 1 cut(s) 252
Eam1104I CTCTTC 1 cut(s) 923
EarI CTCTTC 1 cut(s) 923
Eco130I CCWWGG 1 cut(s) 548
Eco32I GATATC 2 cut(s) 457, 1149
Eco47I GGWCC 1 cut(s) 1007
Eco57I CTGAAG 1 cut(s) 1193
Eco88I CYCGRG 1 cut(s) 1185
EcoRI GAATTC 1 cut(s) 1123
EcoRV GATATC 2 cut(s) 457, 1149
EcoT14I CCWWGG 1 cut(s) 548
ErhI CCWWGG 1 cut(s) 548
Esp3I CGTCTC 1 cut(s) 126
FaeI CATG 3 cut(s) 774, 922, 1196
FaqI GGGAC 1 cut(s) 1195
FatI CATG 3 cut(s) 770, 918, 1192
FauI CCCGC 1 cut(s) 887
FblI GTMKAC 1 cut(s) 1098
Fnu4HI GCNGC 4 cut(s) 26, 190, 414, 732
FokI GGATG 3 cut(s) 331, 581, 1190
Fsp4HI GCNGC 4 cut(s) 26, 190, 414, 732
FspBI CTAG 3 cut(s) 8, 90, 125
GluI GCNGC 4 cut(s) 26, 190, 414, 732
HaeIII GGCC 3 cut(s) 254, 387, 1037
HapII CCGG 3 cut(s) 183, 243, 566
HgaI GACGC 1 cut(s) 143
Hin1I GRCGYC 1 cut(s) 516
Hin1II CATG 3 cut(s) 774, 922, 1196
HindIII AAGCTT 1 cut(s) 1070
HinfI GANTC 3 cut(s) 707, 810, 1183
HpaII CCGG 3 cut(s) 183, 243, 566
HphI GGTGA 1 cut(s) 253
Hpy166II GTNNAC 3 cut(s) 215, 1010, 1099
Hpy188I TCNGA 1 cut(s) 230
Hpy188III TCNNGA 7 cut(s) 52, 125, 470, 566, 831, 1141, 1187
Hpy8I GTNNAC 3 cut(s) 215, 1010, 1099
Hpy99I CGWCG 2 cut(s) 401, 518
HpyAV CCTTC 5 cut(s) 229, 403, 640, 938, 1168
HpyCH4III ACNGT 4 cut(s) 118, 212, 682, 856
HpyCH4IV ACGT 2 cut(s) 516, 537
HpyCH4V TGCA 5 cut(s) 65, 168, 311, 1076, 1196
HpyF10VI GCNNNNNNNGC 2 cut(s) 384, 440
HpyF3I CTNAG 3 cut(s) 471, 620, 671
HpySE526I ACGT 2 cut(s) 516, 537
Hsp92I GRCGYC 1 cut(s) 516
Hsp92II CATG 3 cut(s) 774, 922, 1196
Kpn2I TCCGGA 1 cut(s) 565
KpnI GGTACC 1 cut(s) 654
Kzo9I GATC 6 cut(s) 54, 344, 487, 591, 685, 958
LmnI GCTCC 1 cut(s) 1189
Lsp1109I GCAGC 4 cut(s) 37, 201, 425, 718
LweI GCATC 1 cut(s) 177
MaeI CTAG 3 cut(s) 8, 90, 125
MaeII ACGT 2 cut(s) 516, 537
MaeIII GTNAC 3 cut(s) 206, 538, 674
MalI GATC 6 cut(s) 56, 346, 489, 593, 687, 960
MboI GATC 6 cut(s) 54, 344, 487, 591, 685, 958
MboII GAAGA 7 cut(s) 38, 319, 554, 585, 777, 940, 1156
MflI RGATCY 3 cut(s) 344, 487, 958
MluCI AATT 5 cut(s) 637, 664, 1051, 1123, 1198
MlyI GAGTC 2 cut(s) 819, 1177
MroI TCCGGA 1 cut(s) 565
MroXI GAANNNNTTC 1 cut(s) 428
MseI TTAA 1 cut(s) 663
MspA1I CMGCKG 1 cut(s) 731
MspI CCGG 3 cut(s) 183, 243, 566
Mva1269I GAATGC 1 cut(s) 430
MwoI GCNNNNNNNGC 2 cut(s) 384, 440
NdeII GATC 6 cut(s) 54, 344, 487, 591, 685, 958
NlaIII CATG 3 cut(s) 774, 922, 1196
NlaIV GGNNCC 4 cut(s) 346, 489, 610, 652
NmeAIII GCCGAG 1 cut(s) 363
NmuCI GTSAC 1 cut(s) 538
NspI RCATGY 1 cut(s) 1196
PaeI GCATGC 1 cut(s) 1196
PctI GAATGC 1 cut(s) 430
PdmI GAANNNNTTC 1 cut(s) 428
PfeI GAWTC 1 cut(s) 707
PinAI ACCGGT 1 cut(s) 182
PkrI GCNGC 4 cut(s) 27, 191, 415, 733
PleI GAGTC 2 cut(s) 818, 1177
PpsI GAGTC 2 cut(s) 818, 1177
PshBI ATTAAT 1 cut(s) 663
PspN4I GGNNCC 4 cut(s) 346, 489, 610, 652
PspPI GGNCC 2 cut(s) 1007, 1036
PsuI RGATCY 3 cut(s) 344, 487, 958
RsaI GTAC 3 cut(s) 652, 817, 966
RsaNI GTAC 3 cut(s) 651, 816, 965
SaqAI TTAA 1 cut(s) 663
SatI GCNGC 4 cut(s) 26, 190, 414, 732
Sau3AI GATC 6 cut(s) 54, 344, 487, 591, 685, 958
Sau96I GGNCC 2 cut(s) 1007, 1036
ScaI AGTACT 1 cut(s) 817
SchI GAGTC 2 cut(s) 819, 1177
SfaNI GCATC 1 cut(s) 177
SinI GGWCC 1 cut(s) 1007
SmlI CTYRAG 1 cut(s) 527
SmoI CTYRAG 1 cut(s) 527
SphI GCATGC 1 cut(s) 1196
Sse9I AATT 5 cut(s) 637, 664, 1051, 1123, 1198
SsiI CCGC 5 cut(s) 145, 358, 729, 803, 894
SspMI CTAG 3 cut(s) 8, 90, 125
StyI CCWWGG 1 cut(s) 548
TaaI ACNGT 4 cut(s) 118, 212, 682, 856
TaiI ACGT 2 cut(s) 519, 540
TaqI TCGA 5 cut(s) 199, 285, 396, 453, 513
TasI AATT 5 cut(s) 637, 664, 1051, 1123, 1198
TatI WGTACW 1 cut(s) 815
TfiI GAWTC 1 cut(s) 707
Tru1I TTAA 1 cut(s) 663
Tru9I TTAA 1 cut(s) 663
TscAI CASTG 2 cut(s) 217, 742
TseFI GTSAC 1 cut(s) 538
TseI GCWGC 4 cut(s) 25, 189, 413, 731
Tsp45I GTSAC 1 cut(s) 538
TspDTI ATGAA 6 cut(s) 60, 759, 777, 907, 967, 1099
TspGWI ACGGA 2 cut(s) 357, 1027
TspRI CASTG 2 cut(s) 217, 742
VpaK11BI GGWCC 1 cut(s) 1007
VspI ATTAAT 1 cut(s) 663
XapI RAATTY 1 cut(s) 1123
XbaI TCTAGA 1 cut(s) 124
XceI RCATGY 1 cut(s) 1196
XmiI GTMKAC 1 cut(s) 1098
XmnI GAANNNNTTC 1 cut(s) 428
XspI CTAG 3 cut(s) 8, 90, 125
ZraI GACGTC 1 cut(s) 517
ZrmI AGTACT 1 cut(s) 817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.