Rroxscaffold_7G00209000

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
59235935 .. 59237886
1952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00209000.1

Sequence Viewer

Length: 1929 bp
ATGGCTGTGAGCAGGCTTATTGCATCCTGTAGCCTCTTCATGTTCATCAATTTTTCTCTTTCCTTTGCGCAACCACTTTCCTTCAGTTTCAATCCATCCAACCACCTTAGTACAAACAACATACTCTACGAAGGTGCTGCCAAGCCTTCGAGAGTCATTGAACTCAATGCATATAGCAAGGATCATTTCAGCGTTGGCCGGGCCACATATGCTGAGCCTTTGCACTTATGGGACTCCAGGTCGCAGGCAGACTTCACTACTAATTTCTCATTTGTTGTCGACACTCTTAACGATTCCCGCTCTGGTGATGGATTTGCCTTTTTTCTTGCACCTGTTCACTTTCCCATTCCACCTAATTCAGCTGGTGCTCATCTAGGAATGTTCAACACCTCCACACGTTTTGAACCGTCAATGAATCAAATTGTAATGGTTGAGTTCGACACCAGGTCCGATAAATGGGTTGATCCACAAGGACAACACGTTGGGATCGATGTCAACACCCTCCGCTCGGTCGTTAATGCCAGTTGGAATGCAAGCAGCAACAGTGGGAAGGAGGGTTATGTACGGACAAGTTACAATTCTACTACCCAAAACTTCAGTGTGTATTGGACATATAATGAAAGTCAAAATAACCCTGTTTTTGCGTGGAACTCTTCTCTTTCTTATCCTATTGACCTTAGAAAGGTGCTTCCTGAGTGGGTCACAATTGGTTTTTCAGCTTCTACAGGATTCGGCCTTGAGCGCCACGCTATAAAATCATGGGAATTCAGTTCAAATTTGGATTCTGATGAAAGGATTGTTAAATGGAAGAAGACAACCTTGATTGTGGTTGTTGTAGTTTCCTTCTCCGTTCTAATGATTTTTGTGACCGTGTGCTGGTTTCTAGTAAGGAGGAGAATGAAAAGGATTCGTGGAAATAATTACTTCAATGATGAGCAAAAATCTATGAATACAGATCTTGAGAGACTAGCCTTGCCAAGACGATTTACTTACCAAGAATTATTTGCGGCCACTAATGGCCATGGAGGATCTGGACAAGTTTATAAAGGATTCGTACAAGATGTAGGCGGTGCAGTTGCTGTCAAGAGAATATTTGCACAATCTGAGCAGTATGAGAAAATCTTTACAAATGAAGTCAAGATAATAAGCCGCATAATACATCGACATCTGGTACAGTTCATTGGATGGTGTCATGAGCAAGGTGAATGCTTACTTGTTTATGCATACATGCCAAATAGCAGCCTTGATGAGCATCTATTTGGTTGTAGAACAAGCCTGTTATGGGATTTTAGGTACAAGATAGCCTTGGGCTTGGCCTCGGCCATTTATTATCTACATGAAGATGCAGAGCAGTGTGTGCTTCACAGGGATATTAAATCAGCTAACGTGCTATTGGACAACGATTTCAATACTAAGCTTGGCGATTTTGGCATTGCTAAGCTTGTGGATACTCGGTTTAGGACTCAAACAACAGGGGTGGTAGGGACTTTTGGATACATGGCACCAGAATATGCAAATGGAGGAAGGGCTAGTAAAGAATCAGACATCTTTAGTTTTGGAGTTGTAGCCTTGGAACTGGTATGTGGAAGGCGAACTTACGAGGATGGAGAGTATCATTTGCCACTTTATTGGTGGGTTTGGCAGCTGTACCTTGCTGGAAATCTTCTTAAAGCAGTCGACGAGAGATTAGAAATGATATTTGATCGAAATGAAATGGAATGCTTGTTAATGGTTGGGCTATGGTGCACTCACCCAAAAAGCAAGGAGAGACCAAAAGCAGGACAAGTAATGAAGGTTCTTCGGCTTGAAGCACCACTACCGGAACTCCCAGCAGACATGTATGATCATCATCTACTGCCTCAACTTCAACAACATGCTGGTTCCTCTCAGGTATCCATGACTTCTAGCTTCGATACAGTAGGTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

642

Amino Acids

72.96

Weight (kDa)

6.56

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 27 - 264 1e-62 Legume lectin domain
Pkinase PF00069 340 - 537 4.9e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 340 - 597 1.2e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1044
Acc16I TGCGCA 1 cut(s) 69
AccB1I GGYRCC 1 cut(s) 1501
AccBSI CCGCTC 2 cut(s) 300, 507
AccI GTMKAC 2 cut(s) 279, 1677
AciI CCGC 5 cut(s) 298, 505, 1007, 1068, 1150
AclWI GGATC 4 cut(s) 189, 458, 494, 1036
AcoI YGGCCR 4 cut(s) 196, 1008, 1018, 1320
AcsI RAATTY 2 cut(s) 764, 775
AcuI CTGAAG 2 cut(s) 67, 580
AfaI GTAC 6 cut(s) 112, 564, 1056, 1173, 1295, 1649
AfiI CCNNNNNNNGG 6 cut(s) 456, 508, 682, 876, 1282, 1778
AflIII ACRYGT 3 cut(s) 395, 478, 1836
AgsI TTSAA 9 cut(s) 91, 161, 385, 404, 774, 928, 1408, 1808, 1868
AhdI GACNNNNNGTC 2 cut(s) 238, 445
AjnI CCWGG 2 cut(s) 236, 443
AluBI AGCT 7 cut(s) 362, 719, 1382, 1417, 1441, 1645, 1908
AluI AGCT 7 cut(s) 362, 719, 1382, 1417, 1441, 1645, 1908
Alw21I GWGCWC 2 cut(s) 370, 1748
Alw26I GTCTC 2 cut(s) 958, 1762
Alw44I GTGCAC 1 cut(s) 1744
AlwI GGATC 4 cut(s) 189, 458, 494, 1036
AlwNI CAGNNNCTG 1 cut(s) 1079
AoxI GGCC 7 cut(s) 196, 201, 733, 1008, 1018, 1314, 1320
ApaLI GTGCAC 1 cut(s) 1744
ApeKI GCWGC 4 cut(s) 137, 537, 1239, 1642
ApoI RAATTY 2 cut(s) 764, 775
AspLEI GCGC 2 cut(s) 70, 744
AspS9I GGNCC 2 cut(s) 201, 447
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 3 cut(s) 317, 1214, 1742
AvaII GGWCC 1 cut(s) 447
BaeGI GKGCMC 1 cut(s) 1748
BalI TGGCCA 1 cut(s) 1020
BanI GGYRCC 1 cut(s) 1501
BarI GAAGNNNNNNTAC 2 cut(s) 1800, 1832
BbsI GAAGAC 1 cut(s) 818
Bbv12I GWGCWC 2 cut(s) 370, 1748
BbvI GCAGC 4 cut(s) 124, 549, 1251, 1654
BccI CCATC 4 cut(s) 103, 302, 1179, 1598
BcgI CGANNNNNNTGC 2 cut(s) 119, 153
BciT130I CCWGG 2 cut(s) 238, 445
BciVI GTATCC 3 cut(s) 1441, 1487, 1903
BclI TGATCA 1 cut(s) 1843
BcnI CCSGG 1 cut(s) 200
BcoDI GTCTC 2 cut(s) 958, 1762
BfaI CTAG 5 cut(s) 374, 884, 968, 1530, 1905
BfmI CTRYAG 2 cut(s) 28, 723
BfoI RGCGCY 1 cut(s) 745
BfuI GTATCC 3 cut(s) 1441, 1487, 1903
BglII AGATCT 1 cut(s) 955
BisI GCNGC 6 cut(s) 138, 538, 1008, 1150, 1240, 1643
BlpI GCTNAGC 2 cut(s) 213, 1437
BlsI GCNGC 6 cut(s) 139, 539, 1009, 1151, 1241, 1644
Bme1390I CCNGG 3 cut(s) 200, 238, 445
Bme18I GGWCC 1 cut(s) 447
BmeRI GACNNNNNGTC 2 cut(s) 238, 445
BmgT120I GGNCC 2 cut(s) 201, 447
BmiI GGNNCC 2 cut(s) 1503, 1882
BmrFI CCNGG 3 cut(s) 200, 238, 445
BmsI GCATC 3 cut(s) 32, 1261, 1333
BpiI GAAGAC 1 cut(s) 818
BpmI CTGGAG 1 cut(s) 220
Bpu1102I GCTNAGC 2 cut(s) 213, 1437
BpuEI CTTGAG 2 cut(s) 758, 980
BpuMI CCSGG 1 cut(s) 200
Bsa29I ATCGAT 1 cut(s) 489
BsaBI GATNNNNATC 2 cut(s) 1251, 1848
BsaI GGTCTC 1 cut(s) 1762
BsaJI CCNNGG 4 cut(s) 1021, 1305, 1317, 1569
BsaWI WCCGGW 1 cut(s) 1819
BsaXI ACNNNNNCTCC 2 cut(s) 1809, 1839
Bsc4I CCNNNNNNNGG 6 cut(s) 456, 508, 682, 876, 1282, 1778
Bse1I ACTGG 2 cut(s) 522, 1581
Bse3DI GCAATG 1 cut(s) 1431
Bse8I GATNNNNATC 2 cut(s) 1251, 1848
BseBI CCWGG 2 cut(s) 238, 445
BseCI ATCGAT 1 cut(s) 489
BseDI CCNNGG 4 cut(s) 1021, 1305, 1317, 1569
BseGI GGATG 4 cut(s) 23, 95, 1190, 1609
BseJI GATNNNNATC 2 cut(s) 1251, 1848
BseLI CCNNNNNNNGG 6 cut(s) 456, 508, 682, 876, 1282, 1778
BseMI GCAATG 1 cut(s) 1431
BseMII CTCAG 4 cut(s) 204, 684, 1095, 1901
BseNI ACTGG 2 cut(s) 522, 1581
BseRI GAGGAG 1 cut(s) 907
BseSI GKGCMC 1 cut(s) 1748
BseXI GCAGC 4 cut(s) 124, 549, 1251, 1654
BseYI CCCAGC 1 cut(s) 1828
BsgI GTGCAG 1 cut(s) 1092
Bsh1285I CGRYCG 1 cut(s) 513
BshFI GGCC 7 cut(s) 198, 203, 735, 1010, 1020, 1316, 1322
BshNI GGYRCC 1 cut(s) 1501
BshVI ATCGAT 1 cut(s) 489
BsiEI CGRYCG 1 cut(s) 513
BsiHKAI GWGCWC 2 cut(s) 370, 1748
BsiSI CCGG 2 cut(s) 199, 1820
BslFI GGGAC 2 cut(s) 245, 1498
BslI CCNNNNNNNGG 6 cut(s) 456, 508, 682, 876, 1282, 1778
BsmAI GTCTC 2 cut(s) 958, 1762
BsmFI GGGAC 2 cut(s) 245, 1498
BsmI GAATGC 3 cut(s) 535, 1211, 1724
BsnI GGCC 7 cut(s) 198, 203, 735, 1010, 1020, 1316, 1322
Bso31I GGTCTC 1 cut(s) 1762
Bsp1286I GDGCHC 2 cut(s) 370, 1748
Bsp143I GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
Bsp1720I GCTNAGC 2 cut(s) 213, 1437
Bsp19I CCATGG 1 cut(s) 1021
BspACI CCGC 5 cut(s) 298, 505, 1007, 1068, 1150
BspANI GGCC 7 cut(s) 198, 203, 735, 1010, 1020, 1316, 1322
BspCNI CTCAG 4 cut(s) 205, 685, 1096, 1900
BspDI ATCGAT 1 cut(s) 489
BspHI TCATGA 1 cut(s) 1192
BspLI GGNNCC 2 cut(s) 1503, 1882
BspPI GGATC 4 cut(s) 189, 458, 494, 1036
BspT107I GGYRCC 1 cut(s) 1501
BspTNI GGTCTC 1 cut(s) 1762
BsrBI CCGCTC 2 cut(s) 300, 507
BsrDI GCAATG 1 cut(s) 1431
BsrI ACTGG 2 cut(s) 522, 1581
BssECI CCNNGG 4 cut(s) 1021, 1305, 1317, 1569
BssMI GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
BssT1I CCWWGG 3 cut(s) 1021, 1305, 1569
Bst2UI CCWGG 2 cut(s) 238, 445
Bst4CI ACNGT 5 cut(s) 408, 545, 871, 1176, 1918
Bst6I CTCTTC 2 cut(s) 41, 658
BstAPI GCANNNNNTGC 1 cut(s) 1357
BstC8I GCNNGC 3 cut(s) 14, 246, 535
BstDEI CTNAG 8 cut(s) 107, 213, 677, 693, 1104, 1413, 1437, 1887
BstDSI CCRYGG 1 cut(s) 1021
BstENI CCTNNNNNAGG 1 cut(s) 680
BstF5I GGATG 4 cut(s) 23, 95, 1190, 1609
BstH2I RGCGCY 1 cut(s) 745
BstHHI GCGC 2 cut(s) 70, 744
BstKTI GATC 7 cut(s) 184, 466, 489, 958, 1031, 1705, 1846
BstMAI GTCTC 2 cut(s) 958, 1762
BstMBI GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
BstMCI CGRYCG 1 cut(s) 513
BstMWI GCNNNNNNNGC 4 cut(s) 209, 741, 1357, 1428
BstNI CCWGG 2 cut(s) 238, 445
BstNSI RCATGY 3 cut(s) 1231, 1840, 1877
BstSCI CCNGG 3 cut(s) 198, 236, 443
BstSFI CTRYAG 2 cut(s) 28, 723
BstSLI GKGCMC 1 cut(s) 1748
BstV1I GCAGC 4 cut(s) 124, 549, 1251, 1654
BstV2I GAAGAC 1 cut(s) 818
BstX2I RGATCY 2 cut(s) 955, 1028
BstXI CCANNNNNNTGG 1 cut(s) 1629
BstYI RGATCY 2 cut(s) 955, 1028
Bsu15I ATCGAT 1 cut(s) 489
BsuI GTATCC 3 cut(s) 1441, 1487, 1903
BsuRI GGCC 7 cut(s) 198, 203, 735, 1010, 1020, 1316, 1322
BsuTUI ATCGAT 1 cut(s) 489
BtgI CCRYGG 1 cut(s) 1021
BtsCI GGATG 4 cut(s) 23, 95, 1190, 1609
BtsI GCAGTG 1 cut(s) 1358
BtsIMutI CAGTG 3 cut(s) 550, 604, 1358
Cac8I GCNNGC 3 cut(s) 14, 246, 535
CaiI CAGNNNCTG 1 cut(s) 1079
CciI TCATGA 1 cut(s) 1192
CfoI GCGC 2 cut(s) 70, 744
Cfr13I GGNCC 2 cut(s) 201, 447
ClaI ATCGAT 1 cut(s) 489
CsiI ACCWGGT 1 cut(s) 443
Csp6I GTAC 6 cut(s) 111, 563, 1055, 1172, 1294, 1648
CspCI CAANNNNNGTGG 4 cut(s) 382, 417, 1458, 1493
CviQI GTAC 6 cut(s) 111, 563, 1055, 1172, 1294, 1648
DdeI CTNAG 8 cut(s) 107, 213, 677, 693, 1104, 1413, 1437, 1887
DpnI GATC 7 cut(s) 183, 465, 488, 957, 1030, 1704, 1845
DpnII GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
DriI GACNNNNNGTC 2 cut(s) 238, 445
EaeI YGGCCR 4 cut(s) 196, 1008, 1018, 1320
Eam1104I CTCTTC 2 cut(s) 41, 658
Eam1105I GACNNNNNGTC 2 cut(s) 238, 445
EarI CTCTTC 2 cut(s) 41, 658
Eco130I CCWWGG 3 cut(s) 1021, 1305, 1569
Eco31I GGTCTC 1 cut(s) 1762
Eco47I GGWCC 1 cut(s) 447
Eco57I CTGAAG 2 cut(s) 67, 580
EcoNI CCTNNNNNAGG 1 cut(s) 680
EcoRI GAATTC 1 cut(s) 764
EcoRII CCWGG 2 cut(s) 236, 443
EcoT14I CCWWGG 3 cut(s) 1021, 1305, 1569
EcoT22I ATGCAT 2 cut(s) 172, 1225
ErhI CCWWGG 3 cut(s) 1021, 1305, 1569
FalI AAGNNNNNCTT 6 cut(s) 803, 835, 1289, 1321, 1579, 1611
FaqI GGGAC 2 cut(s) 245, 1498
FauI CCCGC 1 cut(s) 305
FauNDI CATATG 1 cut(s) 208
FbaI TGATCA 1 cut(s) 1843
FblI GTMKAC 2 cut(s) 279, 1677
Fnu4HI GCNGC 6 cut(s) 138, 538, 1008, 1150, 1240, 1643
FokI GGATG 4 cut(s) 10, 82, 1197, 1616
Fsp4HI GCNGC 6 cut(s) 138, 538, 1008, 1150, 1240, 1643
FspBI CTAG 5 cut(s) 374, 884, 968, 1530, 1905
FspI TGCGCA 1 cut(s) 69
GlaI GCGC 2 cut(s) 69, 743
GluI GCNGC 6 cut(s) 138, 538, 1008, 1150, 1240, 1643
GsaI CCCAGC 1 cut(s) 1832
GsuI CTGGAG 1 cut(s) 220
HaeII RGCGCY 1 cut(s) 745
HaeIII GGCC 7 cut(s) 198, 203, 735, 1010, 1020, 1316, 1322
HapII CCGG 2 cut(s) 199, 1820
HhaI GCGC 2 cut(s) 70, 744
Hin6I GCGC 2 cut(s) 68, 742
HinP1I GCGC 2 cut(s) 68, 742
HincII GTYRAC 3 cut(s) 280, 496, 1678
HindII GTYRAC 3 cut(s) 280, 496, 1678
HindIII AAGCTT 2 cut(s) 1415, 1439
HpaII CCGG 2 cut(s) 199, 1820
HphI GGTGA 3 cut(s) 317, 1214, 1742
Hpy166II GTNNAC 5 cut(s) 280, 337, 496, 1678, 1746
Hpy188I TCNGA 4 cut(s) 451, 787, 1105, 1543
Hpy188III TCNNGA 7 cut(s) 150, 692, 959, 1032, 1084, 1138, 1193
Hpy8I GTNNAC 5 cut(s) 280, 337, 496, 1678, 1746
Hpy99I CGWCG 1 cut(s) 1682
HpyAV CCTTC 8 cut(s) 91, 125, 156, 544, 853, 1518, 1581, 1786
HpyCH4III ACNGT 5 cut(s) 408, 545, 871, 1176, 1918
HpyCH4IV ACGT 3 cut(s) 397, 480, 1386
HpyF10VI GCNNNNNNNGC 4 cut(s) 209, 741, 1357, 1428
HpyF3I CTNAG 8 cut(s) 107, 213, 677, 693, 1104, 1413, 1437, 1887
HpySE526I ACGT 3 cut(s) 397, 480, 1386
HspAI GCGC 2 cut(s) 68, 742
Ksp22I TGATCA 1 cut(s) 1843
Kzo9I GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
Lsp1109I GCAGC 4 cut(s) 124, 549, 1251, 1654
LweI GCATC 3 cut(s) 32, 1261, 1333
MabI ACCWGGT 1 cut(s) 443
MaeI CTAG 5 cut(s) 374, 884, 968, 1530, 1905
MaeII ACGT 3 cut(s) 397, 480, 1386
MaeIII GTNAC 3 cut(s) 572, 700, 865
MalI GATC 7 cut(s) 183, 465, 488, 957, 1030, 1704, 1845
MbiI CCGCTC 2 cut(s) 300, 507
MboI GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
MboII GAAGA 7 cut(s) 28, 645, 820, 823, 1352, 1655, 1790
MfeI CAATTG 1 cut(s) 705
MflI RGATCY 2 cut(s) 955, 1028
MhlI GDGCHC 2 cut(s) 370, 1748
MlsI TGGCCA 1 cut(s) 1020
MluNI TGGCCA 1 cut(s) 1020
MlyI GAGTC 3 cut(s) 162, 227, 1456
MmeI TCCRAC 2 cut(s) 123, 506
Mox20I TGGCCA 1 cut(s) 1020
Mph1103I ATGCAT 2 cut(s) 172, 1225
MscI TGGCCA 1 cut(s) 1020
MseI TTAA 6 cut(s) 288, 516, 801, 1374, 1668, 1727
MslI CAYNNNNRTG 1 cut(s) 1341
Msp20I TGGCCA 1 cut(s) 1020
MspA1I CMGCKG 2 cut(s) 362, 1645
MspI CCGG 2 cut(s) 199, 1820
MspR9I CCNGG 3 cut(s) 200, 238, 445
MunI CAATTG 1 cut(s) 705
Mva1269I GAATGC 3 cut(s) 535, 1211, 1724
MvaI CCWGG 2 cut(s) 238, 445
MwoI GCNNNNNNNGC 4 cut(s) 209, 741, 1357, 1428
NciI CCSGG 1 cut(s) 200
NcoI CCATGG 1 cut(s) 1021
NdeI CATATG 1 cut(s) 208
NdeII GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
NlaIV GGNNCC 2 cut(s) 1503, 1882
NmeAIII GCCGAG 1 cut(s) 1298
NmuCI GTSAC 2 cut(s) 700, 865
NsbI TGCGCA 1 cut(s) 69
NsiI ATGCAT 2 cut(s) 172, 1225
NspI RCATGY 3 cut(s) 1231, 1840, 1877
PagI TCATGA 1 cut(s) 1192
PciI ACATGT 1 cut(s) 1836
PcsI WCGNNNNNNNCGW 1 cut(s) 486
PctI GAATGC 3 cut(s) 535, 1211, 1724
PfeI GAWTC 7 cut(s) 293, 415, 729, 782, 907, 1050, 1538
PkrI GCNGC 6 cut(s) 139, 539, 1009, 1151, 1241, 1644
PleI GAGTC 3 cut(s) 161, 227, 1456
PpsI GAGTC 3 cut(s) 161, 227, 1456
PscI ACATGT 1 cut(s) 1836
PsiI TTATAA 1 cut(s) 1044
Psp6I CCWGG 2 cut(s) 236, 443
PspFI CCCAGC 1 cut(s) 1828
PspGI CCWGG 2 cut(s) 236, 443
PspN4I GGNNCC 2 cut(s) 1503, 1882
PspPI GGNCC 2 cut(s) 201, 447
PsrI GAACNNNNNNTAC 2 cut(s) 1779, 1811
PstNI CAGNNNCTG 1 cut(s) 1079
PsuI RGATCY 2 cut(s) 955, 1028
PvuII CAGCTG 2 cut(s) 362, 1645
RsaI GTAC 6 cut(s) 112, 564, 1056, 1173, 1295, 1649
RsaNI GTAC 6 cut(s) 111, 563, 1055, 1172, 1294, 1648
RseI CAYNNNNRTG 1 cut(s) 1341
SalI GTCGAC 2 cut(s) 278, 1676
SaqAI TTAA 6 cut(s) 288, 516, 801, 1374, 1668, 1727
SatI GCNGC 6 cut(s) 138, 538, 1008, 1150, 1240, 1643
Sau3AI GATC 7 cut(s) 181, 463, 486, 955, 1028, 1702, 1843
Sau96I GGNCC 2 cut(s) 201, 447
SchI GAGTC 3 cut(s) 162, 227, 1456
ScrFI CCNGG 3 cut(s) 200, 238, 445
SduI GDGCHC 2 cut(s) 370, 1748
SexAI ACCWGGT 1 cut(s) 443
SfaNI GCATC 3 cut(s) 32, 1261, 1333
SfcI CTRYAG 2 cut(s) 28, 723
SinI GGWCC 1 cut(s) 447
SmiMI CAYNNNNRTG 1 cut(s) 1341
SmlI CTYRAG 2 cut(s) 737, 959
SmoI CTYRAG 2 cut(s) 737, 959
SsiI CCGC 5 cut(s) 298, 505, 1007, 1068, 1150
SspI AATATT 1 cut(s) 1092
SspMI CTAG 5 cut(s) 374, 884, 968, 1530, 1905
StyD4I CCNGG 3 cut(s) 198, 236, 443
StyI CCWWGG 3 cut(s) 1021, 1305, 1569
TaaI ACNGT 5 cut(s) 408, 545, 871, 1176, 1918
TaiI ACGT 3 cut(s) 400, 483, 1389
TaqI TCGA 8 cut(s) 149, 279, 438, 489, 1162, 1677, 1705, 1911
TaqII GACCGA 1 cut(s) 499
TatI WGTACW 1 cut(s) 110
TauI GCSGC 2 cut(s) 1010, 1152
TfiI GAWTC 7 cut(s) 293, 415, 729, 782, 907, 1050, 1538
Tru1I TTAA 6 cut(s) 288, 516, 801, 1374, 1668, 1727
Tru9I TTAA 6 cut(s) 288, 516, 801, 1374, 1668, 1727
TscAI CASTG 3 cut(s) 550, 604, 1358
TseFI GTSAC 2 cut(s) 700, 865
TseI GCWGC 4 cut(s) 137, 537, 1239, 1642
Tsp45I GTSAC 2 cut(s) 700, 865
TspGWI ACGGA 2 cut(s) 580, 838
TspRI CASTG 3 cut(s) 550, 604, 1358
VneI GTGCAC 1 cut(s) 1744
VpaK11BI GGWCC 1 cut(s) 447
XagI CCTNNNNNAGG 1 cut(s) 680
XapI RAATTY 2 cut(s) 764, 775
XceI RCATGY 3 cut(s) 1231, 1840, 1877
XcmI CCANNNNNNNNNTGG 2 cut(s) 1028, 1629
XmiI GTMKAC 2 cut(s) 279, 1677
XspI CTAG 5 cut(s) 374, 884, 968, 1530, 1905
Zsp2I ATGCAT 2 cut(s) 172, 1225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.