FvH4_1g19180

Belongs to the leguminous lectin family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
11384736 .. 11387083
2348 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g19180.t1

Sequence Viewer

Length: 2067 bp
ATGGCTCTCTTCAACTCAGCTTCACACTTCCAAACGCAAACGTTCCCTTCTCTTCTCATTAACATCTTTCTTTTCCTATACCTCCTGCAAAATGTTGTGTCAGTTTCCTTCAACTTTAGCAATTTTACTCCAAATATGAATGAATTAAATTTCGAAGGTGATGCGTTTCCATCATCAGGAGTTATCCAACTCACGAAGAATCAAGTTGATGGTCCACTCACTAGTAGCACCGGTCGAGCCTCCTACGCCTTACCGGTGCGCCTTTGGGATGCCAGCACGGGGAGGCTCACTGACTTCACCACACATTTTTCTTTTGTCATGAAAGCCTTAAATGAAACATACTACTATGGTGATGGCATATCTTTCTTCATTGCACCATTTGATTCACAAATCCCCTCCAATTCTAGCGGTGGGTTTCTTGCACTAGTTAGCTATGATACTGCTTTTGATGCTTCCAAAAATAAGTTTGTTGCTGTTGAGTTCGACAGCAATAACAATACTTGGGATCCAAGTGGTGATCATGTAGGAATTGATGTCAACTCAATTGTCTCGGCGGCTAATGTTACATGGAAAACCACCATAAAAAATGGATCAGTAGCAAATGCATGGGTAAGTTATAACTCAACCACCCATAATTTGACTGTTTTTTTAACTTACGCCAAAAATCCTACATTCACCGGTAGAGAATGTAGCCTTTCATACATAGTTGATTTGAGGAATGAGTTGCCTGAGAAAGTGAGAGTTGGTTTCTCTGCCGCCACGGGTTATTGGGTCGAAATACACAACATTCTGTCCTGGTCATTCAGCTCAAGCTTGCTGGAGCATAATAATGGGGCAAGCAAAGTGAGGTTGGCAGCTGGTCTAGGCACCGGTTTTGGTCTCTTGACTTGTGGACTAGGTCTGTTCTGGTTCATTACATGGAGAAAGAAGGCTGCCCAGAGAGATGACGATTATGACATGTCTATGGATGATGAATTTGACAAAGGAACGGGGCCAAGGAGGTTCACCTACCGTGAAATAAGCCGTGCGACAAACAACTTTGCCGAAGGAGGAAAGCTTGGAGAGGGAGGCTTTGGGGGTGTCTACAAGGGTTTGTTAAATGAATCCAACACAGAAGTTGCTGTCAAGAGGGTGTCTAGAACATCAAAGCAAGGGAAAAAGGAGTACGTAGCGGAAGTGAGGATCATCAGTCGATTAAGGCACAGAAACTTGGTTCAACTAATTGGTTGGTGTCATGAACAAGGTGAGTTTCTTCTTGTGTATGAGATCATGCCAAATGGGAGTCTTGATTCCTATCTGTTTGGAAAGAGCTACAGTCTAAGTTGGCCAGTGAGGTACAAAATAGCACTTGGCTTGGCCTCAGCTGTTTTGTACCTTCATGAGGAATGGGAACAATGTGTGGTGCATAGAGATATCAAGTCAAGCAATGTGATGTTGGATTCAAATTTCAATGCTAAGCTTGGAGATTTTGGGCTTGCAAGGCTTGTAGACCATGAGTTGGGTTCACAAACAACTGTTTTGGCAGGCACAATGGGATATCTAGCCCCAGAGTGTGTCACTACTGGTAAGGCTAGTAAAGAATCTGATGTTTATAGTTTTGGGGTAGTTGCCCTTGAAATCAGTTGTGGAAGAAAACCAGTTGAAGCCAAAGCAGAAGCAAGCAAAGTGAGGCTTGTGGAGTGGGTTTGGGATCTCTATGGGAAAGGCCAAATACTTCAAGCTGTTGATGAGAGGTTGAAAATGAAATATGATGAGAAGGAAATCGAGTGCTTGATGGCGGTAGGATTATGGTGTTGCCATCCTGATCCCACCGTTCGGCCGTCGATTAGGCAAGTGATCAATGTTCTCAGCTTTGAAGCTCCAATGCCAAGCCTCCCATCAAAGTTGCCGGTGCCAATGTACTTTGCTCCTTTGGATATGTGCAAGTTTGCCTATACATCATCTAACTTGACAGGGACATCGGTTAAAGATCGAACTCAATGTTCTTGTACTACCTGCACTACATTCAATTCATCATCAGCAGGATCTTCAAAAGCTCTGTTAAAGTGGAACAAATCTGTTGTGTAG

Protein Analysis

689

Amino Acids

76.25

Weight (kDa)

6.65

Isoelectric Point (pI)

33.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 34 - 275 7.5e-69 Legume lectin domain
Pkinase PF00069 348 - 614 1e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 351 - 615 1.4e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
Acc36I ACCTGC 1 cut(s) 2003
AccB1I GGYRCC 2 cut(s) 866, 1891
AccB7I CCANNNNNTGG 1 cut(s) 1498
AccI GTMKAC 2 cut(s) 1083, 1488
AciI CCGC 5 cut(s) 408, 554, 756, 1172, 1778
AclI AACGTT 1 cut(s) 41
AclWI GGATC 7 cut(s) 500, 513, 598, 1190, 1698, 1799, 2032
AcoI YGGCCR 2 cut(s) 1325, 1817
AcsI RAATTY 3 cut(s) 148, 974, 1444
AfaI GTAC 5 cut(s) 1166, 1337, 1373, 1901, 1990
AfiI CCNNNNNNNGG 5 cut(s) 176, 279, 1381, 1498, 1815
AflIII ACRYGT 1 cut(s) 957
AgeI ACCGGT 4 cut(s) 230, 253, 677, 869
AhlI ACTAGT 2 cut(s) 221, 424
AjnI CCWGG 1 cut(s) 794
Alw26I GTCTC 2 cut(s) 553, 884
AlwI GGATC 7 cut(s) 500, 513, 598, 1190, 1698, 1799, 2032
AoxI GGCC 5 cut(s) 992, 1325, 1356, 1705, 1817
ApeKI GCWGC 2 cut(s) 854, 932
ApoI RAATTY 3 cut(s) 148, 974, 1444
AsiGI ACCGGT 4 cut(s) 230, 253, 677, 869
AspLEI GCGC 1 cut(s) 261
AspS9I GGNCC 2 cut(s) 212, 992
AsuHPI GGTGA 7 cut(s) 170, 289, 362, 527, 667, 997, 1256
AsuII TTCGAA 1 cut(s) 153
AvaII GGWCC 1 cut(s) 212
BalI TGGCCA 1 cut(s) 1327
BamHI GGATCC 1 cut(s) 505
BanI GGYRCC 2 cut(s) 866, 1891
BbvCI CCTCAGC 1 cut(s) 1360
BbvI GCAGC 2 cut(s) 866, 919
BccI CCATC 6 cut(s) 178, 203, 347, 1768, 1806, 1885
BceAI ACGGC 2 cut(s) 1008, 1804
BcgI CGANNNNNNTGC 2 cut(s) 143, 177
BciT130I CCWGG 1 cut(s) 796
BclI TGATCA 2 cut(s) 517, 1836
BcoDI GTCTC 2 cut(s) 553, 884
BcuI ACTAGT 2 cut(s) 221, 424
BfaI CTAG 8 cut(s) 222, 405, 425, 863, 896, 1137, 1541, 1572
BfmI CTRYAG 1 cut(s) 1312
BfuAI ACCTGC 1 cut(s) 2003
BisI GCNGC 4 cut(s) 555, 756, 855, 933
BlpI GCTNAGC 1 cut(s) 1455
BlsI GCNGC 4 cut(s) 556, 757, 856, 934
Bme1390I CCNGG 1 cut(s) 796
Bme18I GGWCC 1 cut(s) 212
BmgT120I GGNCC 2 cut(s) 212, 992
BmiI GGNNCC 4 cut(s) 507, 868, 993, 1893
BmrFI CCNGG 1 cut(s) 796
BmsI GCATC 3 cut(s) 151, 259, 439
BpmI CTGGAG 1 cut(s) 839
Bpu10I CCTNAGC 1 cut(s) 1360
Bpu1102I GCTNAGC 1 cut(s) 1455
Bpu14I TTCGAA 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 793
BsaAI YACGTR 1 cut(s) 1168
BsaBI GATNNNNATC 1 cut(s) 1293
BsaI GGTCTC 1 cut(s) 884
BsaJI CCNNGG 2 cut(s) 759, 995
BsaWI WCCGGW 4 cut(s) 230, 253, 677, 869
Bsc4I CCNNNNNNNGG 5 cut(s) 176, 279, 1381, 1498, 1815
Bse118I RCCGGY 5 cut(s) 230, 253, 677, 869, 1888
Bse1I ACTGG 3 cut(s) 1328, 1567, 1637
Bse3DI GCAATG 2 cut(s) 369, 1432
Bse8I GATNNNNATC 1 cut(s) 1293
BseBI CCWGG 1 cut(s) 796
BseDI CCNNGG 2 cut(s) 759, 995
BseGI GGATG 3 cut(s) 274, 973, 1798
BseJI GATNNNNATC 1 cut(s) 1293
BseLI CCNNNNNNNGG 5 cut(s) 176, 279, 1381, 1498, 1815
BseMI GCAATG 2 cut(s) 369, 1432
BseMII CTCAG 4 cut(s) 30, 720, 1374, 1861
BseNI ACTGG 3 cut(s) 1328, 1567, 1637
BseX3I CGGCCG 1 cut(s) 1817
BseXI GCAGC 2 cut(s) 866, 919
BsgI GTGCAG 1 cut(s) 1981
Bsh1285I CGRYCG 2 cut(s) 235, 1820
BshFI GGCC 5 cut(s) 994, 1327, 1358, 1707, 1819
BshNI GGYRCC 2 cut(s) 866, 1891
BshTI ACCGGT 4 cut(s) 230, 253, 677, 869
BsiEI CGRYCG 2 cut(s) 235, 1820
BsiSI CCGG 5 cut(s) 231, 254, 678, 870, 1889
BslFI GGGAC 1 cut(s) 1969
BslI CCNNNNNNNGG 5 cut(s) 176, 279, 1381, 1498, 1815
BsmAI GTCTC 2 cut(s) 553, 884
BsmFI GGGAC 1 cut(s) 1969
BsnI GGCC 5 cut(s) 994, 1327, 1358, 1707, 1819
Bso31I GGTCTC 1 cut(s) 884
Bsp119I TTCGAA 1 cut(s) 153
Bsp1720I GCTNAGC 1 cut(s) 1455
BspACI CCGC 5 cut(s) 408, 554, 756, 1172, 1778
BspANI GGCC 5 cut(s) 994, 1327, 1358, 1707, 1819
BspCNI CTCAG 4 cut(s) 29, 721, 1373, 1860
BspHI TCATGA 3 cut(s) 318, 1234, 1378
BspLI GGNNCC 4 cut(s) 507, 868, 993, 1893
BspMI ACCTGC 1 cut(s) 2003
BspPI GGATC 7 cut(s) 500, 513, 598, 1190, 1698, 1799, 2032
BspT104I TTCGAA 1 cut(s) 153
BspT107I GGYRCC 2 cut(s) 866, 1891
BspTNI GGTCTC 1 cut(s) 884
BsrDI GCAATG 2 cut(s) 369, 1432
BsrFI RCCGGY 5 cut(s) 230, 253, 677, 869, 1888
BsrI ACTGG 3 cut(s) 1328, 1567, 1637
BssAI RCCGGY 5 cut(s) 230, 253, 677, 869, 1888
BssECI CCNNGG 2 cut(s) 759, 995
BssT1I CCWWGG 1 cut(s) 995
Bst2UI CCWGG 1 cut(s) 796
Bst4CI ACNGT 5 cut(s) 643, 1013, 1316, 1516, 1813
Bst6I CTCTTC 2 cut(s) 14, 57
BstBAI YACGTR 1 cut(s) 1168
BstBI TTCGAA 1 cut(s) 153
BstC8I GCNNGC 6 cut(s) 274, 815, 838, 1476, 1525, 1660
BstDEI CTNAG 6 cut(s) 16, 729, 1319, 1360, 1455, 1847
BstDSI CCRYGG 1 cut(s) 759
BstENI CCTNNNNNAGG 1 cut(s) 1379
BstF5I GGATG 3 cut(s) 274, 973, 1798
BstHHI GCGC 1 cut(s) 261
BstMAI GTCTC 2 cut(s) 553, 884
BstMCI CGRYCG 2 cut(s) 235, 1820
BstMWI GCNNNNNNNGC 3 cut(s) 245, 449, 1480
BstNI CCWGG 1 cut(s) 796
BstNSI RCATGY 1 cut(s) 961
BstSCI CCNGG 1 cut(s) 794
BstSFI CTRYAG 1 cut(s) 1312
BstSNI TACGTA 1 cut(s) 1168
BstV1I GCAGC 2 cut(s) 866, 919
BstX2I RGATCY 3 cut(s) 505, 1690, 2024
BstYI RGATCY 3 cut(s) 505, 1690, 2024
BstZI CGGCCG 1 cut(s) 1817
BsuRI GGCC 5 cut(s) 994, 1327, 1358, 1707, 1819
BtgI CCRYGG 1 cut(s) 759
BtsCI GGATG 3 cut(s) 274, 973, 1798
BtsIMutI CAGTG 2 cut(s) 288, 1335
BveI ACCTGC 1 cut(s) 2003
Cac8I GCNNGC 6 cut(s) 274, 815, 838, 1476, 1525, 1660
CciI TCATGA 3 cut(s) 318, 1234, 1378
CfoI GCGC 1 cut(s) 261
Cfr10I RCCGGY 5 cut(s) 230, 253, 677, 869, 1888
Cfr13I GGNCC 2 cut(s) 212, 992
Csp6I GTAC 5 cut(s) 1165, 1336, 1372, 1900, 1989
CspAI ACCGGT 4 cut(s) 230, 253, 677, 869
CviQI GTAC 5 cut(s) 1165, 1336, 1372, 1900, 1989
DdeI CTNAG 6 cut(s) 16, 729, 1319, 1360, 1455, 1847
EaeI YGGCCR 2 cut(s) 1325, 1817
EagI CGGCCG 1 cut(s) 1817
Eam1104I CTCTTC 2 cut(s) 14, 57
EarI CTCTTC 2 cut(s) 14, 57
EclXI CGGCCG 1 cut(s) 1817
Eco105I TACGTA 1 cut(s) 1168
Eco130I CCWWGG 1 cut(s) 995
Eco31I GGTCTC 1 cut(s) 884
Eco32I GATATC 2 cut(s) 1414, 1538
Eco47I GGWCC 1 cut(s) 212
Eco52I CGGCCG 1 cut(s) 1817
EcoNI CCTNNNNNAGG 1 cut(s) 1379
EcoRII CCWGG 1 cut(s) 794
EcoRV GATATC 2 cut(s) 1414, 1538
EcoT14I CCWWGG 1 cut(s) 995
EcoT22I ATGCAT 1 cut(s) 607
ErhI CCWWGG 1 cut(s) 995
FalI AAGNNNNNCTT 2 cut(s) 1656, 1688
FaqI GGGAC 1 cut(s) 1969
FbaI TGATCA 2 cut(s) 517, 1836
FblI GTMKAC 2 cut(s) 1083, 1488
Fnu4HI GCNGC 4 cut(s) 555, 756, 855, 933
FokI GGATG 3 cut(s) 281, 980, 1785
Fsp4HI GCNGC 4 cut(s) 555, 756, 855, 933
FspBI CTAG 8 cut(s) 222, 405, 425, 863, 896, 1137, 1541, 1572
GlaI GCGC 1 cut(s) 260
GluI GCNGC 4 cut(s) 555, 756, 855, 933
GsuI CTGGAG 1 cut(s) 839
HaeIII GGCC 5 cut(s) 994, 1327, 1358, 1707, 1819
HapII CCGG 5 cut(s) 231, 254, 678, 870, 1889
HhaI GCGC 1 cut(s) 261
Hin6I GCGC 1 cut(s) 259
HinP1I GCGC 1 cut(s) 259
HincII GTYRAC 1 cut(s) 538
HindII GTYRAC 1 cut(s) 538
HindIII AAGCTT 3 cut(s) 811, 1055, 1457
HinfI GANTC 7 cut(s) 199, 383, 1103, 1282, 1289, 1439, 1580
HpaII CCGG 5 cut(s) 231, 254, 678, 870, 1889
HphI GGTGA 7 cut(s) 170, 289, 362, 527, 667, 997, 1256
Hpy166II GTNNAC 7 cut(s) 215, 538, 893, 1005, 1084, 1489, 1505
Hpy188I TCNGA 1 cut(s) 1585
Hpy8I GTNNAC 7 cut(s) 215, 538, 893, 1005, 1084, 1489, 1505
Hpy99I CGWCG 1 cut(s) 1825
HpyAV CCTTC 7 cut(s) 57, 118, 149, 922, 1040, 1385, 1750
HpyCH4III ACNGT 5 cut(s) 643, 1013, 1316, 1516, 1813
HpyCH4IV ACGT 2 cut(s) 41, 1167
HpyCH4V TGCA 8 cut(s) 88, 374, 422, 605, 1405, 1478, 1923, 1998
HpyF10VI GCNNNNNNNGC 3 cut(s) 245, 449, 1480
HpyF3I CTNAG 6 cut(s) 16, 729, 1319, 1360, 1455, 1847
HpySE526I ACGT 2 cut(s) 41, 1167
HspAI GCGC 1 cut(s) 259
Ksp22I TGATCA 2 cut(s) 517, 1836
LmnI GCTCC 3 cut(s) 820, 1864, 1912
Lsp1109I GCAGC 2 cut(s) 866, 919
LweI GCATC 3 cut(s) 151, 259, 439
MaeI CTAG 8 cut(s) 222, 405, 425, 863, 896, 1137, 1541, 1572
MaeII ACGT 2 cut(s) 41, 1167
MaeIII GTNAC 2 cut(s) 562, 1555
MboII GAAGA 6 cut(s) 44, 208, 358, 1244, 1641, 2019
MfeI CAATTG 1 cut(s) 543
MflI RGATCY 3 cut(s) 505, 1690, 2024
MlsI TGGCCA 1 cut(s) 1327
MluNI TGGCCA 1 cut(s) 1327
MlyI GAGTC 1 cut(s) 1291
MmeI TCCRAC 3 cut(s) 211, 1131, 1416
Mox20I TGGCCA 1 cut(s) 1327
Mph1103I ATGCAT 1 cut(s) 607
MscI TGGCCA 1 cut(s) 1327
MseI TTAA 8 cut(s) 60, 146, 329, 650, 1097, 1196, 1965, 2042
MslI CAYNNNNRTG 2 cut(s) 828, 962
Msp20I TGGCCA 1 cut(s) 1327
MspA1I CMGCKG 2 cut(s) 857, 1364
MspI CCGG 5 cut(s) 231, 254, 678, 870, 1889
MspR9I CCNGG 1 cut(s) 796
MunI CAATTG 1 cut(s) 543
MvaI CCWGG 1 cut(s) 796
MwoI GCNNNNNNNGC 3 cut(s) 245, 449, 1480
NlaIV GGNNCC 4 cut(s) 507, 868, 993, 1893
NmeAIII GCCGAG 1 cut(s) 530
NmuCI GTSAC 1 cut(s) 1555
NsiI ATGCAT 1 cut(s) 607
NspI RCATGY 1 cut(s) 961
NspV TTCGAA 1 cut(s) 153
PagI TCATGA 3 cut(s) 318, 1234, 1378
PciI ACATGT 1 cut(s) 957
PfeI GAWTC 6 cut(s) 199, 383, 1103, 1289, 1439, 1580
PflFI GACNNNGTC 1 cut(s) 897
PflMI CCANNNNNTGG 1 cut(s) 1498
PinAI ACCGGT 4 cut(s) 230, 253, 677, 869
PkrI GCNGC 4 cut(s) 556, 757, 856, 934
PleI GAGTC 1 cut(s) 1290
PpsI GAGTC 1 cut(s) 1290
Ppu21I YACGTR 1 cut(s) 1168
PscI ACATGT 1 cut(s) 957
PsiI TTATAA 1 cut(s) 618
Psp1406I AACGTT 1 cut(s) 41
Psp6I CCWGG 1 cut(s) 794
PspGI CCWGG 1 cut(s) 794
PspN4I GGNNCC 4 cut(s) 507, 868, 993, 1893
PspPI GGNCC 2 cut(s) 212, 992
PsuI RGATCY 3 cut(s) 505, 1690, 2024
PsyI GACNNNGTC 1 cut(s) 897
PvuII CAGCTG 2 cut(s) 857, 1364
RsaI GTAC 5 cut(s) 1166, 1337, 1373, 1901, 1990
RsaNI GTAC 5 cut(s) 1165, 1336, 1372, 1900, 1989
RseI CAYNNNNRTG 2 cut(s) 828, 962
SaqAI TTAA 8 cut(s) 60, 146, 329, 650, 1097, 1196, 1965, 2042
SatI GCNGC 4 cut(s) 555, 756, 855, 933
Sau96I GGNCC 2 cut(s) 212, 992
SchI GAGTC 1 cut(s) 1291
ScrFI CCNGG 1 cut(s) 796
SfaNI GCATC 3 cut(s) 151, 259, 439
SfcI CTRYAG 1 cut(s) 1312
SfuI TTCGAA 1 cut(s) 153
SinI GGWCC 1 cut(s) 212
SmiMI CAYNNNNRTG 2 cut(s) 828, 962
SmlI CTYRAG 1 cut(s) 808
SmoI CTYRAG 1 cut(s) 808
SnaBI TACGTA 1 cut(s) 1168
SpeI ACTAGT 2 cut(s) 221, 424
SsiI CCGC 5 cut(s) 408, 554, 756, 1172, 1778
SspMI CTAG 8 cut(s) 222, 405, 425, 863, 896, 1137, 1541, 1572
StyD4I CCNGG 1 cut(s) 794
StyI CCWWGG 1 cut(s) 995
TaaI ACNGT 5 cut(s) 643, 1013, 1316, 1516, 1813
TaiI ACGT 2 cut(s) 44, 1170
TaqI TCGA 8 cut(s) 153, 235, 483, 774, 1192, 1764, 1823, 1972
TatI WGTACW 2 cut(s) 1899, 1988
TauI GCSGC 2 cut(s) 557, 758
TfiI GAWTC 6 cut(s) 199, 383, 1103, 1289, 1439, 1580
Tru1I TTAA 8 cut(s) 60, 146, 329, 650, 1097, 1196, 1965, 2042
Tru9I TTAA 8 cut(s) 60, 146, 329, 650, 1097, 1196, 1965, 2042
TscAI CASTG 2 cut(s) 295, 1335
TseFI GTSAC 1 cut(s) 1555
TseI GCWGC 2 cut(s) 854, 932
Tsp45I GTSAC 1 cut(s) 1555
TspRI CASTG 2 cut(s) 295, 1335
Tth111I GACNNNGTC 1 cut(s) 897
Van91I CCANNNNNTGG 1 cut(s) 1498
VpaK11BI GGWCC 1 cut(s) 212
XagI CCTNNNNNAGG 1 cut(s) 1379
XapI RAATTY 3 cut(s) 148, 974, 1444
XbaI TCTAGA 1 cut(s) 1136
XceI RCATGY 1 cut(s) 961
XmiI GTMKAC 2 cut(s) 1083, 1488
XspI CTAG 8 cut(s) 222, 405, 425, 863, 896, 1137, 1541, 1572
Zsp2I ATGCAT 1 cut(s) 607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.