Rh5CG254100

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
26911562 .. 26913655
2094 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG254100.1

Sequence Viewer

Length: 1212 bp
ATGGCTGTCCATAAACAAGTACAATTTCTTCTTCTCTTCACTCTGTTTACCCCTTTCGCAACACCACTAACCTTCAATTTCTCCACCTTCCCCAATGACACCACCTCTTTGTTCATAGAAGGAGATGCTTATACCGACGGCAAACTCCTCCGGCTCACCAAAAGCGCCAGAGAACCGAAAGTGGCTGGCAACGTTGGTCGAGCCACGTACAGCCAACCATTCCTCCTGCGGGGGGAAGTCTCCGGAAAACTTAAACTTGCAGACTTCACCACGCACTTTACGTTTGTCATTGATTCACAAGGCAACAAAACCTATGGCGATGGGTTGGCGTTCTTCCTGGCGCCAAAAGGATCCTTACTCAACAGTGCATTAGGAGGTGGCGGTAAGCTTGGCCTCCCCGTCGCAGACCTTCCGGGAGGGAATGAGTACCCGTTTGTGGCAGTGGAGTTTGATATCTATCAGAATCCACTGCCAAGCTACATCGACCCTCAATACGATCACGTGGGGGTCGATGTCAACAATCTCAGGTCTAATATTACCATGGCTTGGTCTGGAGATATTCCGAATGCAAAAATCAACAGTGCTTCGATTAGTTATAACTCTAGCTCAAAAAATCTTAGTGTTGCATACACCACTTTTGTGAATGATACAGCTGGTATCCAAAAGCAAGTGATCAGATATCTTAATTACGTGGTTGATCTGAAACAGTACTTGCCCGATTGGGTAATTGTTGGGTTCTCTGCTGCAACCGGTGATAGGATTGCTTTGGCCGAGATCATCTCATGGAATTTCACTTCGACTTCTATCGTTGATGAGATTGTTCATGCGACAGACACTGCACCAGCAACCCGGAACCCTGATACAGTTGAACCAAAGTCAAGAAATAACAATATACCACGAATTGCTGTGGGGCTAGGTGTTGGTGGAAGTATCTTGGTGGCGGGTTTGGCTTTAGTTTGGTTCATCTTTCGGAGGAAGAGGCAAGCACTTAAAAATGATGAACGTTCTATGGTGATACTCAATGACGAGTTCGAAAGGGGAACAGGCCCCAGGAAGTTTTTGTACAGCGAGTTGGCTAGAGCCACGATTCGGGCATTGAGTGATACTATTAGTGGTTCTGAAATAGGTCTTACTAAGTCTTCAAATAGTGACAGCACCAATTCCTCAAAGTTGGCTTCATCTTCTGCAAATTATCAGTCATCGCCTCTTTGA

Protein Analysis

403

Amino Acids

43.81

Weight (kDa)

7.8

Isoelectric Point (pI)

32.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 272 1.5e-58 Legume lectin domain
Lectin_L-type_dom PF18483 87 - 258 6.5e-08 Legume lectin beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AccB1I GGYRCC 1 cut(s) 340
AccB7I CCANNNNNTGG 1 cut(s) 546
AccIII TCCGGA 1 cut(s) 242
AciI CCGC 3 cut(s) 229, 381, 941
AclI AACGTT 2 cut(s) 192, 1003
AclWI GGATC 2 cut(s) 345, 358
AcoI YGGCCR 1 cut(s) 768
AcsI RAATTY 1 cut(s) 787
AcvI CACGTG 1 cut(s) 502
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 5 cut(s) 21, 209, 428, 710, 1064
AfiI CCNNNNNNNGG 6 cut(s) 229, 232, 436, 546, 756, 1089
AgeI ACCGGT 1 cut(s) 749
AgsI TTSAA 3 cut(s) 76, 869, 1143
AjnI CCWGG 2 cut(s) 336, 1049
AleI CACNNNNGTG 1 cut(s) 638
AluBI AGCT 4 cut(s) 388, 477, 606, 653
AluI AGCT 4 cut(s) 388, 477, 606, 653
Alw26I GTCTC 1 cut(s) 244
AlwI GGATC 2 cut(s) 345, 358
AlwNI CAGNNNCTG 1 cut(s) 836
Aor13HI TCCGGA 1 cut(s) 242
AoxI GGCC 3 cut(s) 391, 768, 1045
ApeKI GCWGC 1 cut(s) 743
ApoI RAATTY 1 cut(s) 787
ArsI GACNNNNNNTTYG 1 cut(s) 1181
AsiGI ACCGGT 1 cut(s) 749
AspLEI GCGC 2 cut(s) 167, 343
AspS9I GGNCC 1 cut(s) 1046
AsuC2I CCSGG 2 cut(s) 414, 850
AsuHPI GGTGA 4 cut(s) 148, 259, 764, 1024
AsuII TTCGAA 1 cut(s) 1032
BamHI GGATCC 1 cut(s) 350
BanI GGYRCC 1 cut(s) 340
BarI GAAGNNNNNNTAC 4 cut(s) 12, 44, 1046, 1078
BbrPI CACGTG 1 cut(s) 502
BbsI GAAGAC 1 cut(s) 1131
BbvI GCAGC 1 cut(s) 730
BccI CCATC 1 cut(s) 314
BceAI ACGGC 1 cut(s) 154
BciT130I CCWGG 2 cut(s) 338, 1051
BciVI GTATCC 1 cut(s) 668
BclI TGATCA 1 cut(s) 672
BcnI CCSGG 2 cut(s) 414, 850
BcoDI GTCTC 1 cut(s) 244
BfaI CTAG 3 cut(s) 603, 914, 1077
BfoI RGCGCY 2 cut(s) 168, 344
BfuI GTATCC 1 cut(s) 668
BisI GCNGC 1 cut(s) 744
BlsI GCNGC 1 cut(s) 745
BmcAI AGTACT 1 cut(s) 710
Bme1390I CCNGG 4 cut(s) 338, 414, 850, 1051
BmgT120I GGNCC 1 cut(s) 1046
BmiI GGNNCC 4 cut(s) 342, 352, 854, 1048
BmrFI CCNGG 4 cut(s) 338, 414, 850, 1051
BmsI GCATC 1 cut(s) 115
BpiI GAAGAC 1 cut(s) 1131
BplI GAGNNNNNCTC 2 cut(s) 764, 796
BpmI CTGGAG 1 cut(s) 573
Bpu14I TTCGAA 1 cut(s) 1032
BpuMI CCSGG 2 cut(s) 414, 850
BsaAI YACGTR 3 cut(s) 207, 502, 691
BsaBI GATNNNNATC 1 cut(s) 456
BsaHI GRCGYC 1 cut(s) 341
BsaJI CCNNGG 2 cut(s) 540, 1049
BsaWI WCCGGW 2 cut(s) 242, 749
BsaXI ACNNNNNCTCC 2 cut(s) 207, 237
Bsc4I CCNNNNNNNGG 6 cut(s) 229, 232, 436, 546, 756, 1089
Bse118I RCCGGY 1 cut(s) 749
Bse8I GATNNNNATC 1 cut(s) 456
BseAI TCCGGA 1 cut(s) 242
BseBI CCWGG 2 cut(s) 338, 1051
BseDI CCNNGG 2 cut(s) 540, 1049
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 6 cut(s) 229, 232, 436, 546, 756, 1089
BseMII CTCAG 1 cut(s) 538
BseRI GAGGAG 1 cut(s) 137
BseXI GCAGC 1 cut(s) 730
BsgI GTGCAG 1 cut(s) 822
BshFI GGCC 3 cut(s) 393, 770, 1047
BshNI GGYRCC 1 cut(s) 340
BshTI ACCGGT 1 cut(s) 749
BsiSI CCGG 5 cut(s) 151, 243, 413, 750, 850
BslI CCNNNNNNNGG 6 cut(s) 229, 232, 436, 546, 756, 1089
BsmAI GTCTC 1 cut(s) 244
BsmI GAATGC 1 cut(s) 571
BsnI GGCC 3 cut(s) 393, 770, 1047
Bsp119I TTCGAA 1 cut(s) 1032
Bsp13I TCCGGA 1 cut(s) 242
Bsp1407I TGTACA 1 cut(s) 1062
Bsp143I GATC 5 cut(s) 350, 496, 672, 697, 774
Bsp19I CCATGG 1 cut(s) 540
BspACI CCGC 3 cut(s) 229, 381, 941
BspANI GGCC 3 cut(s) 393, 770, 1047
BspCNI CTCAG 1 cut(s) 537
BspEI TCCGGA 1 cut(s) 242
BspLI GGNNCC 4 cut(s) 342, 352, 854, 1048
BspPI GGATC 2 cut(s) 345, 358
BspT104I TTCGAA 1 cut(s) 1032
BspT107I GGYRCC 1 cut(s) 340
BsrFI RCCGGY 1 cut(s) 749
BsrGI TGTACA 1 cut(s) 1062
BssAI RCCGGY 1 cut(s) 749
BssECI CCNNGG 2 cut(s) 540, 1049
BssMI GATC 5 cut(s) 350, 496, 672, 697, 774
BssNI GRCGYC 1 cut(s) 341
BssT1I CCWWGG 1 cut(s) 540
Bst2UI CCWGG 2 cut(s) 338, 1051
Bst4CI ACNGT 4 cut(s) 365, 581, 708, 865
Bst6I CTCTTC 2 cut(s) 41, 971
BstACI GRCGYC 1 cut(s) 341
BstAUI TGTACA 1 cut(s) 1062
BstBAI YACGTR 3 cut(s) 207, 502, 691
BstBI TTCGAA 1 cut(s) 1032
BstC8I GCNNGC 2 cut(s) 187, 984
BstDEI CTNAG 3 cut(s) 524, 617, 1134
BstDSI CCRYGG 1 cut(s) 540
BstH2I RGCGCY 2 cut(s) 168, 344
BstHHI GCGC 2 cut(s) 167, 343
BstKTI GATC 5 cut(s) 353, 499, 675, 700, 777
BstMAI GTCTC 1 cut(s) 244
BstMBI GATC 5 cut(s) 350, 496, 672, 697, 774
BstMWI GCNNNNNNNGC 1 cut(s) 947
BstNI CCWGG 2 cut(s) 338, 1051
BstSCI CCNGG 4 cut(s) 336, 412, 848, 1049
BstV1I GCAGC 1 cut(s) 730
BstV2I GAAGAC 1 cut(s) 1131
BstX2I RGATCY 1 cut(s) 350
BstYI RGATCY 1 cut(s) 350
BsuI GTATCC 1 cut(s) 668
BsuRI GGCC 3 cut(s) 393, 770, 1047
BtgI CCRYGG 1 cut(s) 540
BtgZI GCGATG 2 cut(s) 333, 1185
BtsI GCAGTG 3 cut(s) 447, 467, 834
BtsIMutI CAGTG 5 cut(s) 370, 447, 467, 586, 834
Cac8I GCNNGC 2 cut(s) 187, 984
CaiI CAGNNNCTG 1 cut(s) 836
CfoI GCGC 2 cut(s) 167, 343
Cfr10I RCCGGY 1 cut(s) 749
Cfr13I GGNCC 1 cut(s) 1046
Csp6I GTAC 5 cut(s) 20, 208, 427, 709, 1063
CspAI ACCGGT 1 cut(s) 749
CviAII CATG 3 cut(s) 541, 783, 824
CviQI GTAC 5 cut(s) 20, 208, 427, 709, 1063
DdeI CTNAG 3 cut(s) 524, 617, 1134
DinI GGCGCC 1 cut(s) 342
DpnI GATC 5 cut(s) 352, 498, 674, 699, 776
DpnII GATC 5 cut(s) 350, 496, 672, 697, 774
EaeI YGGCCR 1 cut(s) 768
Eam1104I CTCTTC 2 cut(s) 41, 971
EarI CTCTTC 2 cut(s) 41, 971
Eco130I CCWWGG 1 cut(s) 540
Eco32I GATATC 2 cut(s) 454, 680
Eco72I CACGTG 1 cut(s) 502
EcoO109I RGGNCCY 1 cut(s) 1046
EcoRII CCWGG 2 cut(s) 336, 1049
EcoRV GATATC 2 cut(s) 454, 680
EcoT14I CCWWGG 1 cut(s) 540
EgeI GGCGCC 1 cut(s) 342
EheI GGCGCC 1 cut(s) 342
ErhI CCWWGG 1 cut(s) 540
FaeI CATG 3 cut(s) 544, 786, 827
FatI CATG 3 cut(s) 540, 782, 823
FauI CCCGC 2 cut(s) 222, 934
FbaI TGATCA 1 cut(s) 672
Fnu4HI GCNGC 1 cut(s) 744
Fsp4HI GCNGC 1 cut(s) 744
FspBI CTAG 3 cut(s) 603, 914, 1077
GlaI GCGC 2 cut(s) 166, 342
GluI GCNGC 1 cut(s) 744
GsuI CTGGAG 1 cut(s) 573
HaeII RGCGCY 2 cut(s) 168, 344
HaeIII GGCC 3 cut(s) 393, 770, 1047
HapII CCGG 5 cut(s) 151, 243, 413, 750, 850
HhaI GCGC 2 cut(s) 167, 343
Hin1I GRCGYC 1 cut(s) 341
Hin1II CATG 3 cut(s) 544, 786, 827
Hin6I GCGC 2 cut(s) 165, 341
HinP1I GCGC 2 cut(s) 165, 341
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HindIII AAGCTT 1 cut(s) 386
HinfI GANTC 3 cut(s) 293, 463, 1087
HpaII CCGG 5 cut(s) 151, 243, 413, 750, 850
HphI GGTGA 4 cut(s) 148, 259, 764, 1024
Hpy166II GTNNAC 2 cut(s) 48, 517
Hpy188I TCNGA 6 cut(s) 462, 564, 677, 702, 972, 1120
Hpy188III TCNNGA 3 cut(s) 243, 552, 879
Hpy8I GTNNAC 2 cut(s) 48, 517
Hpy99I CGWCG 2 cut(s) 140, 404
HpyAV CCTTC 4 cut(s) 82, 97, 113, 419
HpyCH4III ACNGT 4 cut(s) 365, 581, 708, 865
HpyCH4IV ACGT 6 cut(s) 192, 206, 281, 501, 690, 1003
HpyCH4V TGCA 7 cut(s) 260, 368, 569, 626, 746, 839, 1187
HpyF10VI GCNNNNNNNGC 1 cut(s) 947
HpyF3I CTNAG 3 cut(s) 524, 617, 1134
HpySE526I ACGT 6 cut(s) 192, 206, 281, 501, 690, 1003
Hsp92I GRCGYC 1 cut(s) 341
Hsp92II CATG 3 cut(s) 544, 786, 827
HspAI GCGC 2 cut(s) 165, 341
KasI GGCGCC 1 cut(s) 340
Kpn2I TCCGGA 1 cut(s) 242
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 5 cut(s) 350, 496, 672, 697, 774
Lsp1109I GCAGC 1 cut(s) 730
LweI GCATC 1 cut(s) 115
MaeI CTAG 3 cut(s) 603, 914, 1077
MaeII ACGT 6 cut(s) 192, 206, 281, 501, 690, 1003
MaeIII GTNAC 1 cut(s) 1148
MalI GATC 5 cut(s) 352, 498, 674, 699, 776
MboI GATC 5 cut(s) 350, 496, 672, 697, 774
MboII GAAGA 7 cut(s) 20, 23, 28, 325, 988, 1131, 1173
MflI RGATCY 1 cut(s) 350
MluCI AATT 8 cut(s) 23, 76, 685, 726, 787, 900, 1159, 1189
Mly113I GGCGCC 1 cut(s) 341
MroI TCCGGA 1 cut(s) 242
MseI TTAA 3 cut(s) 252, 684, 990
MslI CAYNNNNRTG 1 cut(s) 638
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 5 cut(s) 151, 243, 413, 750, 850
MspR9I CCNGG 4 cut(s) 338, 414, 850, 1051
Mva1269I GAATGC 1 cut(s) 571
MvaI CCWGG 2 cut(s) 338, 1051
MwoI GCNNNNNNNGC 1 cut(s) 947
NarI GGCGCC 1 cut(s) 341
NciI CCSGG 2 cut(s) 414, 850
NcoI CCATGG 1 cut(s) 540
NdeII GATC 5 cut(s) 350, 496, 672, 697, 774
NlaIII CATG 3 cut(s) 544, 786, 827
NlaIV GGNNCC 4 cut(s) 342, 352, 854, 1048
NmeAIII GCCGAG 1 cut(s) 796
NmuCI GTSAC 1 cut(s) 1148
NspV TTCGAA 1 cut(s) 1032
OliI CACNNNNGTG 1 cut(s) 638
PcsI WCGNNNNNNNCGW 2 cut(s) 278, 507
PctI GAATGC 1 cut(s) 571
PfeI GAWTC 3 cut(s) 293, 463, 1087
PflMI CCANNNNNTGG 1 cut(s) 546
PfoI TCCNGGA 1 cut(s) 412
PinAI ACCGGT 1 cut(s) 749
PkrI GCNGC 1 cut(s) 745
PluTI GGCGCC 1 cut(s) 344
PmaCI CACGTG 1 cut(s) 502
PmlI CACGTG 1 cut(s) 502
Ppu21I YACGTR 3 cut(s) 207, 502, 691
PsiI TTATAA 1 cut(s) 597
Psp1406I AACGTT 2 cut(s) 192, 1003
Psp6I CCWGG 2 cut(s) 336, 1049
PspCI CACGTG 1 cut(s) 502
PspGI CCWGG 2 cut(s) 336, 1049
PspN4I GGNNCC 4 cut(s) 342, 352, 854, 1048
PspPI GGNCC 1 cut(s) 1046
PstNI CAGNNNCTG 1 cut(s) 836
PsuI RGATCY 1 cut(s) 350
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 5 cut(s) 21, 209, 428, 710, 1064
RsaNI GTAC 5 cut(s) 20, 208, 427, 709, 1063
RseI CAYNNNNRTG 1 cut(s) 638
SaqAI TTAA 3 cut(s) 252, 684, 990
SatI GCNGC 1 cut(s) 744
Sau3AI GATC 5 cut(s) 350, 496, 672, 697, 774
Sau96I GGNCC 1 cut(s) 1046
ScaI AGTACT 1 cut(s) 710
ScrFI CCNGG 4 cut(s) 338, 414, 850, 1051
SfaNI GCATC 1 cut(s) 115
SfoI GGCGCC 1 cut(s) 342
SfuI TTCGAA 1 cut(s) 1032
SmiMI CAYNNNNRTG 1 cut(s) 638
Sse9I AATT 8 cut(s) 23, 76, 685, 726, 787, 900, 1159, 1189
SsiI CCGC 3 cut(s) 229, 381, 941
SspDI GGCGCC 1 cut(s) 340
SspI AATATT 1 cut(s) 535
SspMI CTAG 3 cut(s) 603, 914, 1077
StyD4I CCNGG 4 cut(s) 336, 412, 848, 1049
StyI CCWWGG 1 cut(s) 540
TaaI ACNGT 4 cut(s) 365, 581, 708, 865
TaiI ACGT 6 cut(s) 195, 209, 284, 504, 693, 1006
TaqI TCGA 6 cut(s) 199, 483, 510, 587, 797, 1032
TasI AATT 8 cut(s) 23, 76, 685, 726, 787, 900, 1159, 1189
TatI WGTACW 3 cut(s) 19, 708, 1062
TfiI GAWTC 3 cut(s) 293, 463, 1087
Tru1I TTAA 3 cut(s) 252, 684, 990
Tru9I TTAA 3 cut(s) 252, 684, 990
TscAI CASTG 5 cut(s) 370, 447, 474, 586, 841
TseFI GTSAC 1 cut(s) 1148
TseI GCWGC 1 cut(s) 743
Tsp45I GTSAC 1 cut(s) 1148
TspDTI ATGAA 5 cut(s) 103, 812, 952, 1014, 1167
TspRI CASTG 5 cut(s) 370, 447, 474, 586, 841
Van91I CCANNNNNTGG 1 cut(s) 546
XapI RAATTY 1 cut(s) 787
XspI CTAG 3 cut(s) 603, 914, 1077
ZrmI AGTACT 1 cut(s) 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.