Rmu_sc0039890.1_g000002

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0039890.1
Physical Location & Seq
Reverse (-)
1304 .. 1948
645 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0039890.1_g000002.1.cds

Sequence Viewer

Length: 645 bp
atgccgaatagcagccttgatgctcatctctttggcagtagagcaaccttgcaatgggatttccggtacaagatagccttaggcttagcttcggcccttcattatctacatgaagatgcagagcaatgtgtccttcacagggatattaaatcagctaacatattgttagacgacgattttacaactaagcttggagattttgggattgctaagcttgtagatgcgcggttgaggactagggcaacaggggtggcagggactttcggctacatggccccggaatatgcttttcaagggagggccagcaaagagtcggacatgtttagttttggagttgtagccttggagattgcttgtggaaggcagacttattacgatggagaatatcacatgccacttttcgagtgggtttggcagttttaccttgcaggaaatgttctcaaggcagctgacgagagattggatatgaaatatgatccaagtgaaatggaatgcttgttaatcgtgggattatggtgcactcacctcaattgtaaggagagaccaaaagcaggacaagtgatgaaggttctgttgcttgaagcgccattgccacaacttccacgtgataggcatacgcatcatcacggtctatatgaacaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

214

Amino Acids

24.37

Weight (kDa)

5.91

Isoelectric Point (pI)

41.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 226
AciI CCGC 1 cut(s) 226
AclWI GGATC 1 cut(s) 470
AcvI CACGTG 1 cut(s) 605
AfaI GTAC 1 cut(s) 68
AfiI CCNNNNNNNGG 3 cut(s) 54, 139, 551
AflIII ACRYGT 1 cut(s) 318
AgsI TTSAA 2 cut(s) 293, 581
AluBI AGCT 5 cut(s) 89, 155, 190, 214, 449
AluI AGCT 5 cut(s) 89, 155, 190, 214, 449
Alw21I GWGCWC 1 cut(s) 521
Alw26I GTCTC 1 cut(s) 535
Alw44I GTGCAC 1 cut(s) 517
AlwI GGATC 1 cut(s) 470
AoxI GGCC 3 cut(s) 93, 273, 300
ApaLI GTGCAC 1 cut(s) 517
ApeKI GCWGC 2 cut(s) 12, 446
AspLEI GCGC 2 cut(s) 226, 586
AspS9I GGNCC 3 cut(s) 94, 274, 300
AsuC2I CCSGG 1 cut(s) 278
AsuHPI GGTGA 1 cut(s) 515
AxyI CCTNAGG 1 cut(s) 79
BaeGI GKGCMC 1 cut(s) 521
BbrPI CACGTG 1 cut(s) 605
Bbv12I GWGCWC 1 cut(s) 521
BbvI GCAGC 2 cut(s) 24, 458
BccI CCATC 1 cut(s) 371
BcnI CCSGG 1 cut(s) 278
BcoDI GTCTC 1 cut(s) 535
BfaI CTAG 1 cut(s) 237
BfoI RGCGCY 1 cut(s) 587
BisI GCNGC 2 cut(s) 13, 447
BlpI GCTNAGC 2 cut(s) 85, 210
BlsI GCNGC 2 cut(s) 14, 448
Bme1390I CCNGG 1 cut(s) 278
BmgT120I GGNCC 3 cut(s) 94, 274, 300
BmiI GGNNCC 1 cut(s) 276
BmrFI CCNGG 1 cut(s) 278
BmsI GCATC 4 cut(s) 10, 106, 211, 628
Bpu1102I GCTNAGC 2 cut(s) 85, 210
BpuEI CTTGAG 1 cut(s) 425
BpuMI CCSGG 1 cut(s) 278
BsaAI YACGTR 1 cut(s) 605
BsaBI GATNNNNATC 1 cut(s) 24
BsaI GGTCTC 1 cut(s) 535
BsaJI CCNNGG 2 cut(s) 276, 342
BsaWI WCCGGW 1 cut(s) 63
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 139, 551
Bse21I CCTNAGG 1 cut(s) 79
Bse3DI GCAATG 3 cut(s) 59, 131, 587
Bse8I GATNNNNATC 1 cut(s) 24
BseDI CCNNGG 2 cut(s) 276, 342
BseJI GATNNNNATC 1 cut(s) 24
BseLI CCNNNNNNNGG 3 cut(s) 54, 139, 551
BseMI GCAATG 3 cut(s) 59, 131, 587
BseSI GKGCMC 1 cut(s) 521
BseXI GCAGC 2 cut(s) 24, 458
Bsh1236I CGCG 1 cut(s) 226
BshFI GGCC 3 cut(s) 95, 275, 302
BsiHKAI GWGCWC 1 cut(s) 521
BsiSI CCGG 2 cut(s) 64, 278
BslFI GGGAC 1 cut(s) 271
BslI CCNNNNNNNGG 3 cut(s) 54, 139, 551
BsmAI GTCTC 1 cut(s) 535
BsmFI GGGAC 1 cut(s) 271
BsmI GAATGC 1 cut(s) 497
BsnI GGCC 3 cut(s) 95, 275, 302
Bso31I GGTCTC 1 cut(s) 535
Bsp1286I GDGCHC 1 cut(s) 521
Bsp143I GATC 1 cut(s) 475
Bsp1720I GCTNAGC 2 cut(s) 85, 210
BspACI CCGC 1 cut(s) 226
BspANI GGCC 3 cut(s) 95, 275, 302
BspFNI CGCG 1 cut(s) 226
BspLI GGNNCC 1 cut(s) 276
BspPI GGATC 1 cut(s) 470
BspTNI GGTCTC 1 cut(s) 535
BsrDI GCAATG 3 cut(s) 59, 131, 587
BssECI CCNNGG 2 cut(s) 276, 342
BssMI GATC 1 cut(s) 475
BssT1I CCWWGG 1 cut(s) 342
Bst4CI ACNGT 1 cut(s) 629
BstBAI YACGTR 1 cut(s) 605
BstC8I GCNNGC 1 cut(s) 304
BstDEI CTNAG 4 cut(s) 79, 85, 186, 210
BstFNI CGCG 1 cut(s) 226
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 2 cut(s) 226, 586
BstKTI GATC 1 cut(s) 478
BstMAI GTCTC 1 cut(s) 535
BstMBI GATC 1 cut(s) 475
BstMWI GCNNNNNNNGC 1 cut(s) 583
BstNSI RCATGY 2 cut(s) 322, 394
BstSCI CCNGG 1 cut(s) 276
BstSLI GKGCMC 1 cut(s) 521
BstUI CGCG 1 cut(s) 226
BstV1I GCAGC 2 cut(s) 24, 458
Bsu36I CCTNAGG 1 cut(s) 79
BsuRI GGCC 3 cut(s) 95, 275, 302
Cac8I GCNNGC 1 cut(s) 304
CfoI GCGC 2 cut(s) 226, 586
Cfr13I GGNCC 3 cut(s) 94, 274, 300
Csp6I GTAC 1 cut(s) 67
CspCI CAANNNNNGTGG 2 cut(s) 231, 266
CviAII CATG 4 cut(s) 110, 271, 319, 391
CviQI GTAC 1 cut(s) 67
DdeI CTNAG 4 cut(s) 79, 85, 186, 210
DpnI GATC 1 cut(s) 477
DpnII GATC 1 cut(s) 475
Eco130I CCWWGG 1 cut(s) 342
Eco31I GGTCTC 1 cut(s) 535
Eco72I CACGTG 1 cut(s) 605
Eco81I CCTNAGG 1 cut(s) 79
EcoT14I CCWWGG 1 cut(s) 342
ErhI CCWWGG 1 cut(s) 342
FaeI CATG 4 cut(s) 113, 274, 322, 394
FalI AAGNNNNNCTT 4 cut(s) 62, 94, 352, 384
FaqI GGGAC 1 cut(s) 271
FatI CATG 4 cut(s) 109, 270, 318, 390
Fnu4HI GCNGC 2 cut(s) 13, 447
Fsp4HI GCNGC 2 cut(s) 13, 447
FspBI CTAG 1 cut(s) 237
GlaI GCGC 2 cut(s) 225, 585
GluI GCNGC 2 cut(s) 13, 447
HaeII RGCGCY 1 cut(s) 587
HaeIII GGCC 3 cut(s) 95, 275, 302
HapII CCGG 2 cut(s) 64, 278
HhaI GCGC 2 cut(s) 226, 586
Hin1II CATG 4 cut(s) 113, 274, 322, 394
Hin6I GCGC 2 cut(s) 224, 584
HinP1I GCGC 2 cut(s) 224, 584
HindIII AAGCTT 2 cut(s) 188, 212
HinfI GANTC 1 cut(s) 311
HpaII CCGG 2 cut(s) 64, 278
HphI GGTGA 1 cut(s) 515
Hpy166II GTNNAC 1 cut(s) 519
Hpy188I TCNGA 1 cut(s) 316
Hpy8I GTNNAC 1 cut(s) 519
Hpy99I CGWCG 1 cut(s) 176
HpyAV CCTTC 4 cut(s) 107, 143, 354, 559
HpyCH4III ACNGT 1 cut(s) 629
HpyCH4IV ACGT 1 cut(s) 604
HpyCH4V TGCA 4 cut(s) 52, 119, 428, 519
HpyF10VI GCNNNNNNNGC 1 cut(s) 583
HpyF3I CTNAG 4 cut(s) 79, 85, 186, 210
HpySE526I ACGT 1 cut(s) 604
Hsp92II CATG 4 cut(s) 113, 274, 322, 394
HspAI GCGC 2 cut(s) 224, 584
Kzo9I GATC 1 cut(s) 475
LpnPI CCDG 8 cut(s) 77, 124, 231, 240, 291, 316, 414, 537
Lsp1109I GCAGC 2 cut(s) 24, 458
LweI GCATC 4 cut(s) 10, 106, 211, 628
MaeI CTAG 1 cut(s) 237
MaeII ACGT 1 cut(s) 604
MalI GATC 1 cut(s) 477
MboI GATC 1 cut(s) 475
MboII GAAGA 1 cut(s) 125
MfeI CAATTG 1 cut(s) 529
MhlI GDGCHC 1 cut(s) 521
MluCI AATT 1 cut(s) 529
MlyI GAGTC 1 cut(s) 320
MmeI TCCRAC 1 cut(s) 294
MnlI CCTC 3 cut(s) 225, 291, 536
MseI TTAA 2 cut(s) 147, 500
MslI CAYNNNNRTG 1 cut(s) 114
MspA1I CMGCKG 1 cut(s) 449
MspI CCGG 2 cut(s) 64, 278
MspR9I CCNGG 1 cut(s) 278
MunI CAATTG 1 cut(s) 529
Mva1269I GAATGC 1 cut(s) 497
MvnI CGCG 1 cut(s) 226
MwoI GCNNNNNNNGC 1 cut(s) 583
NciI CCSGG 1 cut(s) 278
NdeII GATC 1 cut(s) 475
NlaIII CATG 4 cut(s) 113, 274, 322, 394
NlaIV GGNNCC 1 cut(s) 276
NspI RCATGY 2 cut(s) 322, 394
PciI ACATGT 1 cut(s) 318
PctI GAATGC 1 cut(s) 497
PkrI GCNGC 2 cut(s) 14, 448
PleI GAGTC 1 cut(s) 319
PmaCI CACGTG 1 cut(s) 605
PmlI CACGTG 1 cut(s) 605
PpsI GAGTC 1 cut(s) 319
Ppu21I YACGTR 1 cut(s) 605
PscI ACATGT 1 cut(s) 318
PspCI CACGTG 1 cut(s) 605
PspN4I GGNNCC 1 cut(s) 276
PspPI GGNCC 3 cut(s) 94, 274, 300
PvuII CAGCTG 1 cut(s) 449
RsaI GTAC 1 cut(s) 68
RsaNI GTAC 1 cut(s) 67
RseI CAYNNNNRTG 1 cut(s) 114
SaqAI TTAA 2 cut(s) 147, 500
SatI GCNGC 2 cut(s) 13, 447
Sau3AI GATC 1 cut(s) 475
Sau96I GGNCC 3 cut(s) 94, 274, 300
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 1 cut(s) 278
SduI GDGCHC 1 cut(s) 521
SfaNI GCATC 4 cut(s) 10, 106, 211, 628
SmiMI CAYNNNNRTG 1 cut(s) 114
SmlI CTYRAG 1 cut(s) 440
SmoI CTYRAG 1 cut(s) 440
Sse9I AATT 1 cut(s) 529
SsiI CCGC 1 cut(s) 226
SspMI CTAG 1 cut(s) 237
StyD4I CCNGG 1 cut(s) 276
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 1 cut(s) 629
TaiI ACGT 1 cut(s) 607
TaqI TCGA 1 cut(s) 402
TasI AATT 1 cut(s) 529
Tru1I TTAA 2 cut(s) 147, 500
Tru9I TTAA 2 cut(s) 147, 500
TseI GCWGC 2 cut(s) 12, 446
TspDTI ATGAA 4 cut(s) 89, 126, 482, 578
VneI GTGCAC 1 cut(s) 517
XceI RCATGY 2 cut(s) 322, 394
XcmI CCANNNNNNNNNTGG 1 cut(s) 402
XspI CTAG 1 cut(s) 237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.