MD08G1054600.v1.1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
4276922 .. 4278888
1967 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1054600.v1.1.491

Sequence Viewer

Length: 1779 bp
ATGTCTCTTATAAGTTGCAGGCAGGTAACATTGTGTAATAATTTCTATATCTGTCTCTTCATTTTTATCAATTTTCTGCCTGTTATCTGTGCCCGTCGAGCTAATTCCAAATCTTCACTTTCGTTCGCTATACCTCAGTTCAACCTTGACACAAACATACTCTATGAAGGTGATGCCAGACCTTCATTAGGTTTAGGAATGGTAGAACTCAATACAGTCTCTCAATTGTTCCGAGTGGGACGGTTTACTTATTCACAACCTTTGCACTTATGGGAGTCTGCTAGCGGGTCGCTAACAGACTTCACCACTCATTTCACTTTCATGATTGACACTCTAAATAATAGCAGATGGAGTGATGGATTTGCCTTTTTTCTTGCTCCAGTTGGCTTTCCTATTCCACCTAATTCTGCTGGTGGTAATCTAGGATTGTTCAACAGCAGCACAAATTTTGTGCCATCGAAAAACCAAATTGTAATGGTTGAGTTTGATTCCTTCTCGAATGAGTGGGATCCAACCGTGCCTCATGTTGGGATCAATGTGAATAAGATCTTTTCAATTGTTAGCACCAGTTGGGATTTCAGCAGCAACAAATGGAAGGTGGCTAATGCATGGATAACTTACAATGCTACCACAAAGTACCTCAGTGTTACTTTTTCTCTTTCGCACCGTATTGACTTACGAGAGGTTCTCCCCGAACAGGTTACAATTGGTTTTTCAGGTGCCACAGGAGTTTGCCCCGAGCGACATGTTATAAGTTCATGGGAATTCAATTCGCATTTGGATTCCAATGAGATCAGTAAGAAAACCAAGGATACGGAAAGGAAGAAGAAATTGTTTATAGCAGCAACTGCTGGTATTACTTTGTTAGTTTTGATGCTTGGTGTGGCCGCAAATGGCTTTGCCAGCAATGGAAGGCTAGGCCAAGGAGGATCAGGACATGTTTACAAAGGAATGTTACAAGAACTAGGCTGCACTATTGCTGTCAAGAGAATCTTTGCAAAATCCGATTACTATGAGAAGATTTTCATCAACGAAGTCAAGATTATAAGCCGGTTAATACACAGGAACCTGGTGCAGTTCATTGGATGGTGTCACGAAGAAGGCGAATGCTTACTTGTTTATGCATACATGCCTAACAGCAGCCTCGACACACATCTGTTTGGGTCTAAAACAACCCTGCGTTGGGATTTCCGGTATAAGATAGCCTTAGGCTTGGCCTCAGCGCTTCATTATCTACATGAAGATGCAGAGCAATGCGTTCTTCATAGGGATATCAAATCAGCTAATGTATTGTTGGACAAAGACTTCGGTACTAAGCTCGGGGATTTTGGGATTGCTAAGCTCCTCGATCCATGTTCCTGGACTCAGACAAGAGGAGCCGTAGGGACTTTTGGCTACATTGCTCCAGAATATGCAAGTGGAGGGCAGGCCAGTAGAGAATGTGACATATTTAGTTTCGGAGTTGTGGCATTGGAAATCGCTTGTGGACGGAGGACTTACCAGGACGGGGAACTTCATGGGCCACTTGTCAGTTGGGCTTGGCAACTCTACCTTGCAAGAAATATTCTATTTGCAGCTGATGAGAGATTGGAAAGAAAGTTCGATCAAATTGAAATGGAATGCTTGTTGATTATCGGATTATGGTGCACTCATCCCAACAGCAAGGGAAGGCTAAAAGCCGGACAAGTGATGAAGGTTCTTCAGCTCGAAGCACCACTTCCGGAACTTCCACATGACATGCACGAATCTGATCATCACCTTCCTCATCATCATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

593

Amino Acids

66.38

Weight (kDa)

6.74

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 39 - 269 3.5e-61 Legume lectin domain
Pkinase PF00069 302 - 565 2.7e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 304 - 502 5.5e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 11, 752, 1046
Acc36I ACCTGC 1 cut(s) 13
AccB1I GGYRCC 1 cut(s) 719
AccIII TCCGGA 1 cut(s) 1720
AciI CCGC 2 cut(s) 285, 888
AclWI GGATC 5 cut(s) 503, 516, 539, 937, 1343
AcoI YGGCCR 1 cut(s) 885
AcsI RAATTY 2 cut(s) 445, 764
AcuI CTGAAG 1 cut(s) 1685
AfaI GTAC 2 cut(s) 638, 1312
AfeI AGCGCT 1 cut(s) 1224
AfiI CCNNNNNNNGG 6 cut(s) 188, 527, 697, 1182, 1183, 1507
AflIII ACRYGT 2 cut(s) 745, 937
AgsI TTSAA 5 cut(s) 142, 433, 555, 769, 1613
AjnI CCWGG 3 cut(s) 1068, 1358, 1500
AloI GAACNNNNNNTCC 2 cut(s) 1583, 1615
AluBI AGCT 6 cut(s) 101, 1283, 1318, 1342, 1577, 1705
AluI AGCT 6 cut(s) 101, 1283, 1318, 1342, 1577, 1705
Alw21I GWGCWC 1 cut(s) 1649
Alw26I GTCTC 3 cut(s) 9, 59, 223
Alw44I GTGCAC 1 cut(s) 1645
AlwI GGATC 5 cut(s) 503, 516, 539, 937, 1343
AlwNI CAGNNNCTG 1 cut(s) 848
Ama87I CYCGRG 2 cut(s) 737, 1319
Aor13HI TCCGGA 1 cut(s) 1720
Aor51HI AGCGCT 1 cut(s) 1224
AoxI GGCC 5 cut(s) 885, 919, 1215, 1428, 1520
ApaLI GTGCAC 1 cut(s) 1645
ApeKI GCWGC 6 cut(s) 438, 582, 842, 969, 1140, 1574
ApoI RAATTY 2 cut(s) 445, 764
ArsI GACNNNNNNTTYG 2 cut(s) 1289, 1321
Asp700I GAANNNNTTC 1 cut(s) 1022
AspLEI GCGC 1 cut(s) 1225
AspS9I GGNCC 1 cut(s) 1520
AsuHPI GGTGA 3 cut(s) 182, 295, 1748
AsuNHI GCTAGC 1 cut(s) 281
AvaI CYCGRG 2 cut(s) 737, 1319
AxyI CCTNAGG 1 cut(s) 1207
BaeGI GKGCMC 2 cut(s) 94, 1649
BamHI GGATCC 1 cut(s) 508
BanI GGYRCC 1 cut(s) 719
Bbv12I GWGCWC 1 cut(s) 1649
BbvCI CCTCAGC 1 cut(s) 1219
BbvI GCAGC 6 cut(s) 450, 594, 854, 956, 1152, 1586
BccI CCATC 4 cut(s) 342, 350, 463, 1080
BceAI ACGGC 1 cut(s) 1364
BciT130I CCWGG 3 cut(s) 1070, 1360, 1502
BciVI GTATCC 1 cut(s) 805
BclI TGATCA 1 cut(s) 1750
BcoDI GTCTC 3 cut(s) 9, 59, 223
BfaI CTAG 4 cut(s) 282, 422, 917, 965
BfoI RGCGCY 1 cut(s) 1226
BfuAI ACCTGC 1 cut(s) 13
BfuI GTATCC 1 cut(s) 805
BglII AGATCT 1 cut(s) 546
BisI GCNGC 7 cut(s) 439, 583, 843, 888, 970, 1141, 1575
BlpI GCTNAGC 1 cut(s) 1338
BlsI GCNGC 7 cut(s) 440, 584, 844, 889, 971, 1142, 1576
Bme1390I CCNGG 3 cut(s) 1070, 1360, 1502
BmeT110I CYCGRG 2 cut(s) 737, 1319
BmgT120I GGNCC 1 cut(s) 1520
BmiI GGNNCC 4 cut(s) 510, 721, 1067, 1378
BmrFI CCNGG 3 cut(s) 1070, 1360, 1502
BmsI GCATC 3 cut(s) 163, 864, 1234
BmtI GCTAGC 1 cut(s) 285
BplI GAGNNNNNCTC 2 cut(s) 672, 704
BpmI CTGGAG 2 cut(s) 363, 1389
Bpu10I CCTNAGC 1 cut(s) 1219
Bpu1102I GCTNAGC 1 cut(s) 1338
BsaBI GATNNNNATC 1 cut(s) 1025
BsaJI CCNNGG 2 cut(s) 807, 922
BsaWI WCCGGW 2 cut(s) 1191, 1720
Bsc4I CCNNNNNNNGG 6 cut(s) 188, 527, 697, 1182, 1183, 1507
Bse118I RCCGGY 1 cut(s) 1050
Bse1I ACTGG 3 cut(s) 380, 567, 1431
Bse21I CCTNAGG 1 cut(s) 1207
Bse3DI GCAATG 3 cut(s) 913, 1259, 1398
Bse8I GATNNNNATC 1 cut(s) 1025
BseAI TCCGGA 1 cut(s) 1720
BseBI CCWGG 3 cut(s) 1070, 1360, 1502
BseDI CCNNGG 2 cut(s) 807, 922
BseGI GGATG 2 cut(s) 1091, 1651
BseJI GATNNNNATC 1 cut(s) 1025
BseLI CCNNNNNNNGG 6 cut(s) 188, 527, 697, 1182, 1183, 1507
BseMI GCAATG 3 cut(s) 913, 1259, 1398
BseMII CTCAG 4 cut(s) 149, 655, 1233, 1379
BseNI ACTGG 3 cut(s) 380, 567, 1431
BseRI GAGGAG 2 cut(s) 1334, 1389
BseSI GKGCMC 2 cut(s) 94, 1649
BseXI GCAGC 6 cut(s) 450, 594, 854, 956, 1152, 1586
BsgI GTGCAG 2 cut(s) 955, 1094
BshFI GGCC 5 cut(s) 887, 921, 1217, 1430, 1522
BshNI GGYRCC 1 cut(s) 719
BsiHKAI GWGCWC 1 cut(s) 1649
BsiHKCI CYCGRG 2 cut(s) 737, 1319
BsiSI CCGG 4 cut(s) 1051, 1192, 1680, 1721
BslFI GGGAC 2 cut(s) 252, 1399
BslI CCNNNNNNNGG 6 cut(s) 188, 527, 697, 1182, 1183, 1507
BsmAI GTCTC 3 cut(s) 9, 59, 223
BsmFI GGGAC 2 cut(s) 252, 1399
BsmI GAATGC 2 cut(s) 1112, 1625
BsnI GGCC 5 cut(s) 887, 921, 1217, 1430, 1522
BsoBI CYCGRG 2 cut(s) 737, 1319
Bsp1286I GDGCHC 2 cut(s) 94, 1649
Bsp13I TCCGGA 1 cut(s) 1720
Bsp143I GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
Bsp1720I GCTNAGC 1 cut(s) 1338
BspACI CCGC 2 cut(s) 285, 888
BspANI GGCC 5 cut(s) 887, 921, 1217, 1430, 1522
BspCNI CTCAG 4 cut(s) 148, 654, 1232, 1378
BspEI TCCGGA 1 cut(s) 1720
BspHI TCATGA 1 cut(s) 321
BspLI GGNNCC 4 cut(s) 510, 721, 1067, 1378
BspMI ACCTGC 1 cut(s) 13
BspOI GCTAGC 1 cut(s) 285
BspPI GGATC 5 cut(s) 503, 516, 539, 937, 1343
BspT107I GGYRCC 1 cut(s) 719
BsrDI GCAATG 3 cut(s) 913, 1259, 1398
BsrFI RCCGGY 1 cut(s) 1050
BsrI ACTGG 3 cut(s) 380, 567, 1431
BssAI RCCGGY 1 cut(s) 1050
BssECI CCNNGG 2 cut(s) 807, 922
BssMI GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
BssT1I CCWWGG 2 cut(s) 807, 922
Bst2UI CCWGG 3 cut(s) 1070, 1360, 1502
Bst4CI ACNGT 4 cut(s) 217, 243, 517, 668
Bst6I CTCTTC 1 cut(s) 62
BstAPI GCANNNNNTGC 1 cut(s) 848
BstC8I GCNNGC 4 cut(s) 20, 283, 904, 1428
BstDEI CTNAG 7 cut(s) 135, 641, 1207, 1219, 1314, 1338, 1365
BstENI CCTNNNNNAGG 1 cut(s) 186
BstF5I GGATG 2 cut(s) 1091, 1651
BstH2I RGCGCY 1 cut(s) 1226
BstHHI GCGC 1 cut(s) 1225
BstKTI GATC 8 cut(s) 511, 534, 549, 795, 932, 1351, 1606, 1753
BstMAI GTCTC 3 cut(s) 9, 59, 223
BstMBI GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
BstMWI GCNNNNNNNGC 3 cut(s) 98, 848, 903
BstNI CCWGG 3 cut(s) 1070, 1360, 1502
BstNSI RCATGY 4 cut(s) 749, 941, 1132, 1741
BstSCI CCNGG 3 cut(s) 1068, 1358, 1500
BstSLI GKGCMC 2 cut(s) 94, 1649
BstV1I GCAGC 6 cut(s) 450, 594, 854, 956, 1152, 1586
BstX2I RGATCY 2 cut(s) 508, 546
BstXI CCANNNNNNTGG 1 cut(s) 1359
BstYI RGATCY 2 cut(s) 508, 546
Bsu36I CCTNAGG 1 cut(s) 1207
BsuI GTATCC 1 cut(s) 805
BsuRI GGCC 5 cut(s) 887, 921, 1217, 1430, 1522
BtsCI GGATG 2 cut(s) 1091, 1651
BtsIMutI CAGTG 1 cut(s) 649
BveI ACCTGC 1 cut(s) 13
Cac8I GCNNGC 4 cut(s) 20, 283, 904, 1428
CaiI CAGNNNCTG 1 cut(s) 848
CciI TCATGA 1 cut(s) 321
CfoI GCGC 1 cut(s) 1225
Cfr10I RCCGGY 1 cut(s) 1050
Cfr13I GGNCC 1 cut(s) 1520
CsiI ACCWGGT 1 cut(s) 1068
Csp6I GTAC 2 cut(s) 637, 1311
CviQI GTAC 2 cut(s) 637, 1311
DdeI CTNAG 7 cut(s) 135, 641, 1207, 1219, 1314, 1338, 1365
DpnI GATC 8 cut(s) 510, 533, 548, 794, 931, 1350, 1605, 1752
DpnII GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
EaeI YGGCCR 1 cut(s) 885
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
Eco130I CCWWGG 2 cut(s) 807, 922
Eco32I GATATC 1 cut(s) 1273
Eco47III AGCGCT 1 cut(s) 1224
Eco57I CTGAAG 1 cut(s) 1685
Eco81I CCTNAGG 1 cut(s) 1207
Eco88I CYCGRG 2 cut(s) 737, 1319
EcoNI CCTNNNNNAGG 1 cut(s) 186
EcoRI GAATTC 1 cut(s) 764
EcoRII CCWGG 3 cut(s) 1068, 1358, 1500
EcoRV GATATC 1 cut(s) 1273
EcoT14I CCWWGG 2 cut(s) 807, 922
EcoT22I ATGCAT 2 cut(s) 610, 1126
ErhI CCWWGG 2 cut(s) 807, 922
FalI AAGNNNNNCTT 6 cut(s) 977, 1009, 1190, 1222, 1701, 1733
FaqI GGGAC 2 cut(s) 252, 1399
FauI CCCGC 1 cut(s) 278
FbaI TGATCA 1 cut(s) 1750
Fnu4HI GCNGC 7 cut(s) 439, 583, 843, 888, 970, 1141, 1575
FokI GGATG 2 cut(s) 1098, 1638
Fsp4HI GCNGC 7 cut(s) 439, 583, 843, 888, 970, 1141, 1575
FspBI CTAG 4 cut(s) 282, 422, 917, 965
GlaI GCGC 1 cut(s) 1224
GluI GCNGC 7 cut(s) 439, 583, 843, 888, 970, 1141, 1575
GsuI CTGGAG 2 cut(s) 363, 1389
HaeII RGCGCY 1 cut(s) 1226
HaeIII GGCC 5 cut(s) 887, 921, 1217, 1430, 1522
HapII CCGG 4 cut(s) 1051, 1192, 1680, 1721
HhaI GCGC 1 cut(s) 1225
Hin6I GCGC 1 cut(s) 1223
HinP1I GCGC 1 cut(s) 1223
HinfI GANTC 6 cut(s) 275, 488, 782, 990, 1363, 1745
HpaII CCGG 4 cut(s) 1051, 1192, 1680, 1721
HphI GGTGA 3 cut(s) 182, 295, 1748
Hpy166II GTNNAC 4 cut(s) 246, 943, 1487, 1647
Hpy188I TCNGA 6 cut(s) 233, 1006, 1368, 1460, 1637, 1750
Hpy188III TCNNGA 8 cut(s) 322, 496, 933, 985, 1039, 1094, 1406, 1721
Hpy8I GTNNAC 4 cut(s) 246, 943, 1487, 1647
Hpy99I CGWCG 1 cut(s) 99
HpyAV CCTTC 9 cut(s) 161, 192, 502, 589, 906, 1094, 1662, 1687, 1769
HpyCH4III ACNGT 4 cut(s) 217, 243, 517, 668
HpyF10VI GCNNNNNNNGC 3 cut(s) 98, 848, 903
HpyF3I CTNAG 7 cut(s) 135, 641, 1207, 1219, 1314, 1338, 1365
HspAI GCGC 1 cut(s) 1223
Kpn2I TCCGGA 1 cut(s) 1720
Ksp22I TGATCA 1 cut(s) 1750
Kzo9I GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
LmnI GCTCC 4 cut(s) 382, 1347, 1376, 1408
Lsp1109I GCAGC 6 cut(s) 450, 594, 854, 956, 1152, 1586
LweI GCATC 3 cut(s) 163, 864, 1234
MabI ACCWGGT 1 cut(s) 1068
MaeI CTAG 4 cut(s) 282, 422, 917, 965
MaeIII GTNAC 6 cut(s) 25, 646, 700, 954, 1091, 1442
MalI GATC 8 cut(s) 510, 533, 548, 794, 931, 1350, 1605, 1752
MboI GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
MboII GAAGA 9 cut(s) 49, 105, 835, 838, 1030, 1109, 1253, 1253, 1691
MfeI CAATTG 3 cut(s) 224, 555, 705
MflI RGATCY 2 cut(s) 508, 546
MhlI GDGCHC 2 cut(s) 94, 1649
MlyI GAGTC 2 cut(s) 284, 1357
MmeI TCCRAC 2 cut(s) 536, 1275
Mph1103I ATGCAT 2 cut(s) 610, 1126
MroI TCCGGA 1 cut(s) 1720
MroXI GAANNNNTTC 1 cut(s) 1022
MseI TTAA 1 cut(s) 1055
MslI CAYNNNNRTG 2 cut(s) 320, 1242
MspA1I CMGCKG 1 cut(s) 1577
MspI CCGG 4 cut(s) 1051, 1192, 1680, 1721
MspR9I CCNGG 3 cut(s) 1070, 1360, 1502
MunI CAATTG 3 cut(s) 224, 555, 705
Mva1269I GAATGC 2 cut(s) 1112, 1625
MvaI CCWGG 3 cut(s) 1070, 1360, 1502
MwoI GCNNNNNNNGC 3 cut(s) 98, 848, 903
NdeII GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
NheI GCTAGC 1 cut(s) 281
NlaIV GGNNCC 4 cut(s) 510, 721, 1067, 1378
NmuCI GTSAC 2 cut(s) 1091, 1442
NsiI ATGCAT 2 cut(s) 610, 1126
NspI RCATGY 4 cut(s) 749, 941, 1132, 1741
PagI TCATGA 1 cut(s) 321
PciI ACATGT 2 cut(s) 745, 937
PcsI WCGNNNNNNNCGW 1 cut(s) 1101
PctI GAATGC 2 cut(s) 1112, 1625
PdmI GAANNNNTTC 1 cut(s) 1022
PfeI GAWTC 4 cut(s) 488, 782, 990, 1745
PfoI TCCNGGA 1 cut(s) 1358
PkrI GCNGC 7 cut(s) 440, 584, 844, 889, 971, 1142, 1576
PleI GAGTC 2 cut(s) 283, 1357
PpsI GAGTC 2 cut(s) 283, 1357
PscI ACATGT 2 cut(s) 745, 937
PsiI TTATAA 3 cut(s) 11, 752, 1046
Psp6I CCWGG 3 cut(s) 1068, 1358, 1500
PspGI CCWGG 3 cut(s) 1068, 1358, 1500
PspN4I GGNNCC 4 cut(s) 510, 721, 1067, 1378
PspPI GGNCC 1 cut(s) 1520
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 2 cut(s) 508, 546
PvuII CAGCTG 1 cut(s) 1577
RsaI GTAC 2 cut(s) 638, 1312
RsaNI GTAC 2 cut(s) 637, 1311
RseI CAYNNNNRTG 2 cut(s) 320, 1242
SaqAI TTAA 1 cut(s) 1055
SatI GCNGC 7 cut(s) 439, 583, 843, 888, 970, 1141, 1575
Sau3AI GATC 8 cut(s) 508, 531, 546, 792, 929, 1348, 1603, 1750
Sau96I GGNCC 1 cut(s) 1520
SchI GAGTC 2 cut(s) 284, 1357
ScrFI CCNGG 3 cut(s) 1070, 1360, 1502
SduI GDGCHC 2 cut(s) 94, 1649
SexAI ACCWGGT 1 cut(s) 1068
SfaNI GCATC 3 cut(s) 163, 864, 1234
SmiMI CAYNNNNRTG 2 cut(s) 320, 1242
SsiI CCGC 2 cut(s) 285, 888
SspI AATATT 1 cut(s) 1564
SspMI CTAG 4 cut(s) 282, 422, 917, 965
StyD4I CCNGG 3 cut(s) 1068, 1358, 1500
StyI CCWWGG 2 cut(s) 807, 922
TaaI ACNGT 4 cut(s) 217, 243, 517, 668
TaqI TCGA 7 cut(s) 97, 458, 497, 1146, 1347, 1602, 1707
TauI GCSGC 1 cut(s) 890
TfiI GAWTC 4 cut(s) 488, 782, 990, 1745
Tru1I TTAA 1 cut(s) 1055
Tru9I TTAA 1 cut(s) 1055
TscAI CASTG 1 cut(s) 649
TseFI GTSAC 2 cut(s) 1091, 1442
TseI GCWGC 6 cut(s) 438, 582, 842, 969, 1140, 1574
Tsp45I GTSAC 2 cut(s) 1091, 1442
TspGWI ACGGA 2 cut(s) 830, 1504
TspRI CASTG 1 cut(s) 649
VneI GTGCAC 1 cut(s) 1645
XagI CCTNNNNNAGG 1 cut(s) 186
XapI RAATTY 2 cut(s) 445, 764
XceI RCATGY 4 cut(s) 749, 941, 1132, 1741
XcmI CCANNNNNNNNNTGG 1 cut(s) 1530
XmnI GAANNNNTTC 1 cut(s) 1022
XspI CTAG 4 cut(s) 282, 422, 917, 965
Zsp2I ATGCAT 2 cut(s) 610, 1126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.