MD08G1053200.v1.1

L-type lectin-domain containing receptor kinase IX.1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
4147597 .. 4149565
1969 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1053200.v1.1.491

Sequence Viewer

Length: 1908 bp
ATGTCGCTAAACAACACAAGCAGCAGAGAGCCACTTTCCTTCAATATTACACAATTTTATCATGGTACAACGAACATTGTCTACGAAGGTGACGCAGCGCCTGTACTAGGAGGGATTGAACTCAACGCAGAGTCTACATGGACGTGGACCGTTGGGCGGGCTACATATGCAGACCCTTTGCACTTATGGGACTCCAACTCCGGGTCACTTGCAGACTTCGTTACTCATTTCACTTTCAATATCAACGCTGCTGGCCAAAACCATAGTGACGGGTTTGCGTTTTTCCTTGCTCCTGTTGGTGTCCCAATTCCGCTTAACTCGGGTGGGGGTTTTCTCGGATTATTCAACAGCACCACCATGTCAGACAACAAAATTGCTTCCGTCGAGTTCGATACCTACTCAAACAGTTACTGGGATCCAGCCGGACCGCATGTTGGGATCAATATCGATAAAATCGCTTCTGCTGTTCAGCCTAGTTGGAACTTTAGCAGCGATTATAATAAGAAGAATGTGAATGTGTGGATAACTTACAATGCTACCACTAAAAACCTCAGTGTGTTCTGGACAAACAAGGAAAACCCTGTTTTCGTAGGCAATTCTTCTCTTTCTTACGTTGTTGACTTACGCAAGTGCCTTCCCGATTTGGTTACAATTGGTTTTTCAGCTGCTACAGGACAATACCCCGAGCGGCACACGATATACTCATGGGATTTCAATTCAAGTTTGGATCCTACGCATGAGAAAAACAGGAAACACAAGTGGAAAGGAAACGAGAAATGGTTGATAGCGGTCTTTGCGGCTTCCTTCTTGATTGTGGCGATTGGCGTGGCGGCCTTATGTTGTTTGGTTAAAAGGATTGGATCGTTTGCGAACAGAAATCACAGCTCCAATGGATTGCACTCTATAAGTGCGAAGCTTGAGAGACTAGCTGTCCCAAAAAGGTTTTCTTACCAAGAATTAGTCGTGGCCACTAATGACTTCGCGAAAGAAAGAAGGCTAGGCCAGGGAGGGTCAGGACAAGTTTATAAAGGGATCTTACAAGATCTTGGCTGCCTAGTTGCTGTTAAGAGAATCTTGACAGAATCCGAGCGCTATGAGAAAATCTTCATCAATGAAGTGAAGATAATAAGCCACTTATTTCATCGAAATCTGGTCCAGTTCATTGGATGGTGTCACAAGAATGGAGAATGCTTGCTTGTTTATGCATACATGTCCAACGGCAGCCTTGACACGCACCTGTTTGGTTCTCGAGTAACTCTGCAATGGGAATCCCGGTACAAGATAGCTTTAGGGTTGGCCTCGGCACTTCATTACCTACACGAAGAAGCAGAGCAATGTGTCCTTCACAGGGATATCAAATCAGCTAACGTACTGTTGGACAATAATTTCAGCACTAAGCTTGGTGATTTTGGTATTGCGAAGCTCGTGGATCCGCGATTCAGGAGTCAGACAACAGGGGTAGTAGGGACTTTCGGATACATGGCCCCAGAATATGCAAGTGGAGGGAGGGCCAGCAAAGAATCAGACATTTACAGTTTGGGAGTTGTAGCCTTGGAAATTGCATGTGGAAGGAGGACTTACCAAGATGGAGAGTATCATGTGCCACTTTTCCGGTGGGTTTGGCAGCTCTACCTTGCCGGAAATCTTCTCCACGTAGCCGATGAGAGATTAAATTTGAACTTTGATAGAAATGAAATGGAATGTTTGCTATTTGTGGGGTTATGGTGCACCCACCCCAGGAAAACGGAAAGACCAAAAGCAGGGCAGGTGATAAAGGTTCTTCAGCTCGAAGCGCCGCTGCCAGAACTTCCACCAGACATGCATGACCATTATCCACTGCCTCAACCTCAACAAGAAGCTGATTCAGCCTCTCACATATCTTTAACTTCTAGCTTGGATGGTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

636

Amino Acids

70.89

Weight (kDa)

6.64

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 12 - 253 1.3e-67 Legume lectin domain
Lectin_L-type_dom PF18483 71 - 233 2.9e-08 Legume lectin beta-barrel domain
Pkinase PF00069 328 - 531 4.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 329 - 529 1.4e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 498, 1026
AarI CACCTGC 1 cut(s) 1756
Acc36I ACCTGC 1 cut(s) 1756
AccBSI CCGCTC 1 cut(s) 688
AccI GTMKAC 2 cut(s) 81, 134
AccII CGCG 2 cut(s) 983, 1435
AciI CCGC 9 cut(s) 157, 311, 428, 688, 788, 797, 830, 1433, 1796
AclWI GGATC 9 cut(s) 410, 423, 446, 722, 735, 868, 1040, 1424, 1437
AcoI YGGCCR 2 cut(s) 253, 966
AcsI RAATTY 1 cut(s) 1672
AcuI CTGAAG 1 cut(s) 1766
AfaI GTAC 4 cut(s) 67, 105, 1277, 1371
AfeI AGCGCT 1 cut(s) 1091
AfiI CCNNNNNNNGG 7 cut(s) 107, 156, 201, 434, 1348, 1737, 1760
AflIII ACRYGT 1 cut(s) 1209
AgsI TTSAA 7 cut(s) 43, 119, 238, 346, 715, 720, 1678
AhdI GACNNNNNGTC 1 cut(s) 929
AjiI CACGTC 1 cut(s) 144
AjnI CCWGG 2 cut(s) 1002, 1736
AjuI GAANNNNNNNTTGG 2 cut(s) 928, 960
Alw21I GWGCWC 1 cut(s) 1730
Alw26I GTCTC 1 cut(s) 916
Alw44I GTGCAC 1 cut(s) 1726
AlwI GGATC 9 cut(s) 410, 423, 446, 722, 735, 868, 1040, 1424, 1437
AlwNI CAGNNNCTG 2 cut(s) 101, 411
Ama87I CYCGRG 3 cut(s) 319, 683, 1248
Aor51HI AGCGCT 1 cut(s) 1091
AoxI GGCC 7 cut(s) 253, 831, 966, 1000, 1296, 1482, 1509
ApaLI GTGCAC 1 cut(s) 1726
ApeKI GCWGC 9 cut(s) 21, 95, 248, 489, 665, 1050, 1221, 1624, 1798
ApoI RAATTY 1 cut(s) 1672
Asp700I GAANNNNTTC 1 cut(s) 1103
AspLEI GCGC 3 cut(s) 100, 1092, 1795
AspS9I GGNCC 5 cut(s) 147, 425, 1153, 1483, 1509
AsuC2I CCSGG 2 cut(s) 202, 1273
AsuHPI GGTGA 3 cut(s) 101, 1415, 1780
AvaI CYCGRG 3 cut(s) 319, 683, 1248
AvaII GGWCC 3 cut(s) 147, 425, 1153
BaeGI GKGCMC 1 cut(s) 1730
BalI TGGCCA 2 cut(s) 255, 968
BamHI GGATCC 3 cut(s) 415, 727, 1429
BauI CACGAG 1 cut(s) 1424
Bbv12I GWGCWC 1 cut(s) 1730
BbvI GCAGC 9 cut(s) 33, 107, 235, 501, 652, 1037, 1233, 1636, 1785
BccI CCATC 3 cut(s) 1161, 1580, 1892
BceAI ACGGC 1 cut(s) 1234
BciT130I CCWGG 2 cut(s) 1004, 1738
BciVI GTATCC 1 cut(s) 1469
BcnI CCSGG 2 cut(s) 202, 1273
BcoDI GTCTC 1 cut(s) 916
BfaI CTAG 6 cut(s) 107, 474, 926, 998, 1055, 1890
BfmI CTRYAG 1 cut(s) 669
BfoI RGCGCY 3 cut(s) 101, 1093, 1796
BfuAI ACCTGC 1 cut(s) 1756
BfuI GTATCC 1 cut(s) 1469
BglII AGATCT 1 cut(s) 1042
Bme1390I CCNGG 4 cut(s) 202, 1004, 1273, 1738
Bme18I GGWCC 3 cut(s) 147, 425, 1153
BmeRI GACNNNNNGTC 1 cut(s) 929
BmeT110I CYCGRG 3 cut(s) 319, 683, 1248
BmgBI CACGTC 1 cut(s) 144
BmgT120I GGNCC 5 cut(s) 147, 425, 1153, 1483, 1509
BmiI GGNNCC 4 cut(s) 417, 729, 1431, 1485
BmrFI CCNGG 4 cut(s) 202, 1004, 1273, 1738
BmrI ACTGGG 1 cut(s) 421
BmuI ACTGGG 1 cut(s) 421
BpuEI CTTGAG 1 cut(s) 938
BpuMI CCSGG 2 cut(s) 202, 1273
Bsa29I ATCGAT 1 cut(s) 447
BsaAI YACGTR 1 cut(s) 1654
BsaBI GATNNNNATC 1 cut(s) 443
BsaJI CCNNGG 4 cut(s) 1003, 1299, 1551, 1736
BsaWI WCCGGW 1 cut(s) 1611
BsaXI ACNNNNNCTCC 2 cut(s) 182, 212
Bsc4I CCNNNNNNNGG 7 cut(s) 107, 156, 201, 434, 1348, 1737, 1760
Bse1I ACTGG 2 cut(s) 416, 1156
Bse3DI GCAATG 2 cut(s) 1268, 1340
Bse8I GATNNNNATC 1 cut(s) 443
BseBI CCWGG 2 cut(s) 1004, 1738
BseCI ATCGAT 1 cut(s) 447
BseDI CCNNGG 4 cut(s) 1003, 1299, 1551, 1736
BseGI GGATG 2 cut(s) 1172, 1903
BseJI GATNNNNATC 1 cut(s) 443
BseLI CCNNNNNNNGG 7 cut(s) 107, 156, 201, 434, 1348, 1737, 1760
BseMI GCAATG 2 cut(s) 1268, 1340
BseMII CTCAG 1 cut(s) 565
BseNI ACTGG 2 cut(s) 416, 1156
BseSI GKGCMC 1 cut(s) 1730
BseXI GCAGC 9 cut(s) 33, 107, 235, 501, 652, 1037, 1233, 1636, 1785
Bsh1236I CGCG 2 cut(s) 983, 1435
BshFI GGCC 7 cut(s) 255, 833, 968, 1002, 1298, 1484, 1511
BshVI ATCGAT 1 cut(s) 447
BsiHKAI GWGCWC 1 cut(s) 1730
BsiHKCI CYCGRG 3 cut(s) 319, 683, 1248
BsiSI CCGG 5 cut(s) 201, 423, 1273, 1612, 1638
BslFI GGGAC 4 cut(s) 203, 287, 917, 1480
BslI CCNNNNNNNGG 7 cut(s) 107, 156, 201, 434, 1348, 1737, 1760
BsmAI GTCTC 1 cut(s) 916
BsmFI GGGAC 4 cut(s) 203, 287, 917, 1480
BsmI GAATGC 1 cut(s) 1193
BsnI GGCC 7 cut(s) 255, 833, 968, 1002, 1298, 1484, 1511
BsoBI CYCGRG 3 cut(s) 319, 683, 1248
Bsp1286I GDGCHC 1 cut(s) 1730
Bsp143I GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
Bsp68I TCGCGA 1 cut(s) 983
BspACI CCGC 9 cut(s) 157, 311, 428, 688, 788, 797, 830, 1433, 1796
BspANI GGCC 7 cut(s) 255, 833, 968, 1002, 1298, 1484, 1511
BspCNI CTCAG 1 cut(s) 564
BspDI ATCGAT 1 cut(s) 447
BspFNI CGCG 2 cut(s) 983, 1435
BspLI GGNNCC 4 cut(s) 417, 729, 1431, 1485
BspMI ACCTGC 1 cut(s) 1756
BspPI GGATC 9 cut(s) 410, 423, 446, 722, 735, 868, 1040, 1424, 1437
BsrBI CCGCTC 1 cut(s) 688
BsrDI GCAATG 2 cut(s) 1268, 1340
BsrI ACTGG 2 cut(s) 416, 1156
BssECI CCNNGG 4 cut(s) 1003, 1299, 1551, 1736
BssMI GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
BssSI CACGAG 1 cut(s) 1424
BssT1I CCWWGG 1 cut(s) 1551
Bst2BI CACGAG 1 cut(s) 1424
Bst2UI CCWGG 2 cut(s) 1004, 1738
Bst4CI ACNGT 4 cut(s) 151, 407, 1374, 1535
BstBAI YACGTR 1 cut(s) 1654
BstC8I GCNNGC 4 cut(s) 159, 253, 1193, 1513
BstDEI CTNAG 2 cut(s) 551, 1395
BstENI CCTNNNNNAGG 1 cut(s) 105
BstF5I GGATG 2 cut(s) 1172, 1903
BstFNI CGCG 2 cut(s) 983, 1435
BstH2I RGCGCY 3 cut(s) 101, 1093, 1796
BstHHI GCGC 3 cut(s) 100, 1092, 1795
BstKTI GATC 7 cut(s) 418, 441, 730, 863, 1035, 1045, 1432
BstMAI GTCTC 1 cut(s) 916
BstMBI GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
BstMWI GCNNNNNNNGC 4 cut(s) 167, 794, 1792, 1865
BstNI CCWGG 2 cut(s) 1004, 1738
BstNSI RCATGY 4 cut(s) 434, 1213, 1566, 1822
BstSCI CCNGG 4 cut(s) 200, 1002, 1271, 1736
BstSFI CTRYAG 1 cut(s) 669
BstSLI GKGCMC 1 cut(s) 1730
BstUI CGCG 2 cut(s) 983, 1435
BstV1I GCAGC 9 cut(s) 33, 107, 235, 501, 652, 1037, 1233, 1636, 1785
BstX2I RGATCY 5 cut(s) 415, 727, 1032, 1042, 1429
BstXI CCANNNNNNTGG 1 cut(s) 1163
BstYI RGATCY 5 cut(s) 415, 727, 1032, 1042, 1429
Bsu15I ATCGAT 1 cut(s) 447
BsuI GTATCC 1 cut(s) 1469
BsuRI GGCC 7 cut(s) 255, 833, 968, 1002, 1298, 1484, 1511
BsuTUI ATCGAT 1 cut(s) 447
BtrI CACGTC 1 cut(s) 144
BtsCI GGATG 2 cut(s) 1172, 1903
BtsI GCAGTG 1 cut(s) 1835
BtsIMutI CAGTG 2 cut(s) 559, 1835
BtuMI TCGCGA 1 cut(s) 983
BveI ACCTGC 1 cut(s) 1756
Cac8I GCNNGC 4 cut(s) 159, 253, 1193, 1513
CaiI CAGNNNCTG 2 cut(s) 101, 411
CfoI GCGC 3 cut(s) 100, 1092, 1795
Cfr13I GGNCC 5 cut(s) 147, 425, 1153, 1483, 1509
ClaI ATCGAT 1 cut(s) 447
CpoI CGGWCCG 1 cut(s) 425
CseI GACGC 1 cut(s) 101
Csp6I GTAC 4 cut(s) 66, 104, 1276, 1370
CspI CGGWCCG 1 cut(s) 425
CviQI GTAC 4 cut(s) 66, 104, 1276, 1370
DdeI CTNAG 2 cut(s) 551, 1395
DpnI GATC 7 cut(s) 417, 440, 729, 862, 1034, 1044, 1431
DpnII GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
DriI GACNNNNNGTC 1 cut(s) 929
EaeI YGGCCR 2 cut(s) 253, 966
Eam1105I GACNNNNNGTC 1 cut(s) 929
Eco130I CCWWGG 1 cut(s) 1551
Eco32I GATATC 1 cut(s) 1354
Eco47I GGWCC 3 cut(s) 147, 425, 1153
Eco47III AGCGCT 1 cut(s) 1091
Eco57I CTGAAG 1 cut(s) 1766
Eco88I CYCGRG 3 cut(s) 319, 683, 1248
EcoNI CCTNNNNNAGG 1 cut(s) 105
EcoRII CCWGG 2 cut(s) 1002, 1736
EcoRV GATATC 1 cut(s) 1354
EcoT14I CCWWGG 1 cut(s) 1551
EcoT22I ATGCAT 2 cut(s) 1207, 1824
ErhI CCWWGG 1 cut(s) 1551
FalI AAGNNNNNCTT 6 cut(s) 931, 963, 1058, 1090, 1561, 1593
FaqI GGGAC 4 cut(s) 203, 287, 917, 1480
FauI CCCGC 1 cut(s) 150
FauNDI CATATG 1 cut(s) 166
FblI GTMKAC 2 cut(s) 81, 134
FokI GGATG 1 cut(s) 1179
FspBI CTAG 6 cut(s) 107, 474, 926, 998, 1055, 1890
GlaI GCGC 3 cut(s) 99, 1091, 1794
HaeII RGCGCY 3 cut(s) 101, 1093, 1796
HaeIII GGCC 7 cut(s) 255, 833, 968, 1002, 1298, 1484, 1511
HapII CCGG 5 cut(s) 201, 423, 1273, 1612, 1638
HgaI GACGC 1 cut(s) 101
HhaI GCGC 3 cut(s) 100, 1092, 1795
Hin6I GCGC 3 cut(s) 98, 1090, 1793
HinP1I GCGC 3 cut(s) 98, 1090, 1793
HincII GTYRAC 1 cut(s) 619
HindII GTYRAC 1 cut(s) 619
HindIII AAGCTT 2 cut(s) 914, 1397
HinfI GANTC 9 cut(s) 131, 191, 1071, 1082, 1268, 1437, 1444, 1520, 1862
HpaII CCGG 5 cut(s) 201, 423, 1273, 1612, 1638
HphI GGTGA 3 cut(s) 101, 1415, 1780
Hpy166II GTNNAC 5 cut(s) 82, 135, 147, 619, 1728
Hpy188I TCNGA 6 cut(s) 338, 364, 1087, 1449, 1475, 1525
Hpy188III TCNNGA 8 cut(s) 562, 638, 808, 982, 1014, 1075, 1248, 1441
Hpy8I GTNNAC 5 cut(s) 82, 135, 147, 619, 1728
Hpy99I CGWCG 1 cut(s) 386
HpyAV CCTTC 7 cut(s) 49, 80, 644, 814, 987, 1352, 1563
HpyCH4III ACNGT 4 cut(s) 151, 407, 1374, 1535
HpyCH4IV ACGT 4 cut(s) 143, 612, 1368, 1653
HpyF10VI GCNNNNNNNGC 4 cut(s) 167, 794, 1792, 1865
HpyF3I CTNAG 2 cut(s) 551, 1395
HpySE526I ACGT 4 cut(s) 143, 612, 1368, 1653
HspAI GCGC 3 cut(s) 98, 1090, 1793
Kzo9I GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
LmnI GCTCC 2 cut(s) 295, 890
Lsp1109I GCAGC 9 cut(s) 33, 107, 235, 501, 652, 1037, 1233, 1636, 1785
MaeI CTAG 6 cut(s) 107, 474, 926, 998, 1055, 1890
MaeII ACGT 4 cut(s) 143, 612, 1368, 1653
MaeIII GTNAC 8 cut(s) 89, 204, 220, 266, 407, 646, 1172, 1252
MalI GATC 7 cut(s) 417, 440, 729, 862, 1034, 1044, 1431
MbiI CCGCTC 1 cut(s) 688
MboI GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
MboII GAAGA 7 cut(s) 517, 591, 1096, 1132, 1334, 1637, 1772
MfeI CAATTG 1 cut(s) 651
MflI RGATCY 5 cut(s) 415, 727, 1032, 1042, 1429
MhlI GDGCHC 1 cut(s) 1730
MlsI TGGCCA 2 cut(s) 255, 968
MluNI TGGCCA 2 cut(s) 255, 968
MlyI GAGTC 3 cut(s) 140, 185, 1453
MmeI TCCRAC 4 cut(s) 219, 458, 1239, 1356
Mox20I TGGCCA 2 cut(s) 255, 968
Mph1103I ATGCAT 2 cut(s) 1207, 1824
MroXI GAANNNNTTC 1 cut(s) 1103
MscI TGGCCA 2 cut(s) 255, 968
MseI TTAA 5 cut(s) 315, 849, 1065, 1670, 1883
MslI CAYNNNNRTG 3 cut(s) 142, 356, 1179
Msp20I TGGCCA 2 cut(s) 255, 968
MspA1I CMGCKG 2 cut(s) 665, 1798
MspI CCGG 5 cut(s) 201, 423, 1273, 1612, 1638
MspR9I CCNGG 4 cut(s) 202, 1004, 1273, 1738
MunI CAATTG 1 cut(s) 651
Mva1269I GAATGC 1 cut(s) 1193
MvaI CCWGG 2 cut(s) 1004, 1738
MvnI CGCG 2 cut(s) 983, 1435
MwoI GCNNNNNNNGC 4 cut(s) 167, 794, 1792, 1865
NciI CCSGG 2 cut(s) 202, 1273
NdeI CATATG 1 cut(s) 166
NdeII GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
NlaIV GGNNCC 4 cut(s) 417, 729, 1431, 1485
NmeAIII GCCGAG 1 cut(s) 1280
NmuCI GTSAC 4 cut(s) 89, 204, 266, 1172
NruI TCGCGA 1 cut(s) 983
NsiI ATGCAT 2 cut(s) 1207, 1824
NspI RCATGY 4 cut(s) 434, 1213, 1566, 1822
PaeR7I CTCGAG 1 cut(s) 1248
PaqCI CACCTGC 1 cut(s) 1756
PciI ACATGT 1 cut(s) 1209
PctI GAATGC 1 cut(s) 1193
PdmI GAANNNNTTC 1 cut(s) 1103
PfeI GAWTC 6 cut(s) 1071, 1082, 1268, 1437, 1520, 1862
PleI GAGTC 3 cut(s) 139, 185, 1452
PpsI GAGTC 3 cut(s) 139, 185, 1452
Ppu21I YACGTR 1 cut(s) 1654
PscI ACATGT 1 cut(s) 1209
PsiI TTATAA 2 cut(s) 498, 1026
Psp6I CCWGG 2 cut(s) 1002, 1736
PspGI CCWGG 2 cut(s) 1002, 1736
PspN4I GGNNCC 4 cut(s) 417, 729, 1431, 1485
PspPI GGNCC 5 cut(s) 147, 425, 1153, 1483, 1509
PsrI GAACNNNNNNTAC 2 cut(s) 65, 97
PstNI CAGNNNCTG 2 cut(s) 101, 411
PsuI RGATCY 5 cut(s) 415, 727, 1032, 1042, 1429
PvuII CAGCTG 1 cut(s) 665
RruI TCGCGA 1 cut(s) 983
RsaI GTAC 4 cut(s) 67, 105, 1277, 1371
RsaNI GTAC 4 cut(s) 66, 104, 1276, 1370
RseI CAYNNNNRTG 3 cut(s) 142, 356, 1179
Rsr2I CGGWCCG 1 cut(s) 425
RsrII CGGWCCG 1 cut(s) 425
SaqAI TTAA 5 cut(s) 315, 849, 1065, 1670, 1883
Sau3AI GATC 7 cut(s) 415, 438, 727, 860, 1032, 1042, 1429
Sau96I GGNCC 5 cut(s) 147, 425, 1153, 1483, 1509
SchI GAGTC 3 cut(s) 140, 185, 1453
ScrFI CCNGG 4 cut(s) 202, 1004, 1273, 1738
SduI GDGCHC 1 cut(s) 1730
SfcI CTRYAG 1 cut(s) 669
Sfr274I CTCGAG 1 cut(s) 1248
SinI GGWCC 3 cut(s) 147, 425, 1153
SlaI CTCGAG 1 cut(s) 1248
SmiMI CAYNNNNRTG 3 cut(s) 142, 356, 1179
SmlI CTYRAG 2 cut(s) 917, 1248
SmoI CTYRAG 2 cut(s) 917, 1248
SsiI CCGC 9 cut(s) 157, 311, 428, 688, 788, 797, 830, 1433, 1796
SspI AATATT 1 cut(s) 46
SspMI CTAG 6 cut(s) 107, 474, 926, 998, 1055, 1890
StyD4I CCNGG 4 cut(s) 200, 1002, 1271, 1736
StyI CCWWGG 1 cut(s) 1551
TaaI ACNGT 4 cut(s) 151, 407, 1374, 1535
TaiI ACGT 4 cut(s) 146, 615, 1371, 1656
TaqI TCGA 6 cut(s) 384, 390, 447, 1144, 1249, 1788
TatI WGTACW 1 cut(s) 103
TauI GCSGC 4 cut(s) 691, 800, 833, 1798
TfiI GAWTC 6 cut(s) 1071, 1082, 1268, 1437, 1520, 1862
Tru1I TTAA 5 cut(s) 315, 849, 1065, 1670, 1883
Tru9I TTAA 5 cut(s) 315, 849, 1065, 1670, 1883
TscAI CASTG 2 cut(s) 559, 1842
TseFI GTSAC 4 cut(s) 89, 204, 266, 1172
TseI GCWGC 9 cut(s) 21, 95, 248, 489, 665, 1050, 1221, 1624, 1798
Tsp45I GTSAC 4 cut(s) 89, 204, 266, 1172
TspDTI ATGAA 6 cut(s) 1096, 1128, 1130, 1150, 1298, 1707
TspGWI ACGGA 2 cut(s) 370, 1760
TspRI CASTG 2 cut(s) 559, 1842
VneI GTGCAC 1 cut(s) 1726
VpaK11BI GGWCC 3 cut(s) 147, 425, 1153
XagI CCTNNNNNAGG 1 cut(s) 105
XapI RAATTY 1 cut(s) 1672
XceI RCATGY 4 cut(s) 434, 1213, 1566, 1822
XcmI CCANNNNNNNNNTGG 1 cut(s) 1611
XhoI CTCGAG 1 cut(s) 1248
XmiI GTMKAC 2 cut(s) 81, 134
XmnI GAANNNNTTC 1 cut(s) 1103
XspI CTAG 6 cut(s) 107, 474, 926, 998, 1055, 1890
Zsp2I ATGCAT 2 cut(s) 1207, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.