Rw2G015870

L-type lectin-domain containing receptor kinase IX.1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000038
Physical Location & Seq
Reverse (-)
18514575 .. 18516593
2019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G015870.1

Sequence Viewer

Length: 2019 bp
ATGAGCATGCATGCGATGATGTCTCTAATAAGGGTGGCAACTTTTTGTCTTCACTACTTCTTGAATAATTGCAGTATTATGCACTTGATCATCTCCATCAATTTCCTCCTTATTCCCCTTTGCCATACACTTTCCTTCAATATCAGTCACTTCGATAATTCTGCAAGTAAGATACTCTACGACGGTGATGCAGCGCCTTCTTCCGACGGTTCGGGATTCATTGAACTCAATAGAGATGAAGCTTGTCTTGTTGGCTGGGCGAGATATGCAGAGCCGTTGCACTTGTGGGAGGGGTCGTCACTTGCTGCAGACTTCACCACTGACTTCTCCTTCATTGTGCACTTTCTTAACAGCAGCGAAATTGGTGATGGGCTTTCCTTCTTCCTCGCTCCGGTCCACTATACAATTCCACCCAACTCCCGCGGTCCTTTGATGGGTTTGTTCAACGCAACCACTCAGTTGGCAGTCTCCCAAAACCAGCTTGTGACGGTTGAGTTCGACACTACATCCAATCCCGTCTGGGATCCACCGGTGACGCACATCGGGATCAACGACAGGAGCGTCAGGTCAGTTGTTAATGCCAGCTGGGATCCTCTCAGTGGGAAACCGTGTCATGCACGGATAACGTACAATGCTACCACCAACAACCTCACTGTGTTTTGGACATACGAAGAAAATTTCGAGGCAAATTCTTCCCTTTCCTATTCTATTGACCTGAAAATGTCTCTCCCGGAGTGGGTTAGAATTGGATTTGCATCTTCTACAGGCCTTTTCCATGAGAGGCATGTTATAAGATCATGGGAATTCAGTAGTTCAGAAATAAAGTCCGATGCGAGCCGAAGGAGGATAGTCTTGAGGATTGGGGTCGCTGTAGCAGCAGTAGTTCTTTTCTTGATTTTAGTGCTTTATGTATCCTACCGGTGGGTCGTAGGGAAGCGGATAAAGAGGACCCGTGGAGAAGTAATTGAGTCGAATGACTCCTCCAGGTTTGCATTGTCTCCCATAAATTCAGATCTTCAGATACTAGCCTTGCCAAGACAATTTACTTATCAAGAACTAGTTGCAGCCACCAATGGCTTCGCAAACGACAGAAGGCTAGGCCAAGGAGGATCCGGACAAGTTTATAAAGGGATCATACAAGATCTAGGCTGTGCAGTTGCTGTGAAGAGAATCTTTGCACAATCCGACAAGTATGAGAAAATCTTCATCAACGAAGTCAAGATCATAAGCCGAATAATACATAAAAACTTGGTGCAGTTTATTGGATGGTGCCATGAGCAAGGCGAATGCTTACTTGTATATGCATACATGTCTAACAGTAGCCTTGACACGCATCTATTTGGCTCCAGGGCAACCTTGAAGTGGGGCTTTCGGTATAAGATAGCTTTAGGCTTGGCCTCGGCGCTTCATTATCTACACGAGGAAGCAGAGCAGTGTGTCCTTCATAGGGATATCAAATCAGCTAACGTTCTGTTGGACAACGATTTTAGCACTAAACTTGGTGATTTTGGGATTGCTAAGCTTGTGGATTCGCGGTTAAGGTCTCAGACTACAGGGGTAGTCGGGACTTTTGGGTACATAGCTCCAGAATACGCTAGTGAAGGGAGGGCAAGCAAAGAATCAGATATTTTTAGCTTCGGAGTTGTGGCCTTGGAAATTGCTTGTGGAAGGACGACTTACCACGACGGAGAATTCCACTTGTCGCTTTATAGGTGGGTTTGGCATTTGTACCTTGCAGGAAACTTACTAGATGCAGCTGATCAGAGATTGGGTGTAGATTTTGATCAAAATGAAATGGAGTGCTTGTTAATTGTTGGATTATGGTGCACTCATCCCAACTGCAAAGAAAGGCCAAAAGCAGGACAAGTGATTAAGGTTCTCCAGCTTGAAGCACCATTGCCAAATCTTCCACATAGCATGCCTGATTACCCAATGCCTCAACCTCAGCAACAAGATCAATCCGGTTCCTCTCAGCCACAGTCGTCACTAACTTCTAGCTTCAACACTGTAGGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lectin_legB Pkinase

Protein Analysis

672

Amino Acids

75.13

Weight (kDa)

6.22

Isoelectric Point (pI)

51.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 44 - 280 1.1e-60 Legume lectin domain
Pkinase PF00069 361 - 563 2.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 363 - 562 3.4e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10530 AT5G65600
fragaria_vesca FvH4_1g17770 FvH4_1g19171 FvH4_1g19180 FvH4_1g19922 FvH4_1g19923 FvH4_1g19940 FvH4_1g19950 FvH4_3g19030 FvH4_3g19040 FvH4_3g19350 FvH4_3g19361 FvH4_3g19370 FvH4_3g19372 FvH4_3g19390 FvH4_3g19390 FvH4_3g19400 FvH4_3g19400 FvH4_3g23100 FvH4_3g32500 FvH4_3g39140 FvH4_4g12891 FvH4_4g12900 FvH4_5g13890 FvH4_6g23490 FvH4_7g14930 FvH4_7g14950 FvH4_7g15082 FvH4_7g16980
malus_domestica MD01G1043400.v1.1 MD01G1043500.v1.1 MD03G1232800.v1.1 MD03G1232900.v1.1 MD03G1233000.v1.1 MD03G1233100.v1.1 MD03G1233200.v1.1 MD03G1233300.v1.1 MD03G1233600.v1.1 MD03G1233700.v1.1 MD03G1233900.v1.1 MD03G1234100.v1.1 MD03G1234300.v1.1 MD03G1234400.v1.1 MD03G1234500.v1.1 MD03G1234600.v1.1 MD08G1053200.v1.1 MD08G1053400.v1.1 MD08G1053500.v1.1 MD08G1053600.v1.1 MD08G1053800.v1.1 MD08G1053900.v1.1 MD08G1054000.v1.1 MD08G1054100.v1.1 MD08G1054200.v1.1 MD08G1054400.v1.1 MD08G1054600.v1.1 MD09G1175200.v1.1 MD09G1289800.v1.1 MD09G1289900.v1.1 MD11G1253600.v1.1 MD11G1254300.v1.1 MD11G1254500.v1.1 MD11G1254900.v1.1 MD11G1255100.v1.1 MD15G1042500.v1.1 MD15G1053100.v1.1 MD15G1053200.v1.1 MD15G1307500.v1.1
prunus_persica Prupe.1G157800_v2.0.a1 Prupe.1G395700_v2.0.a1 Prupe.4G174600_v2.0.a1 Prupe.4G174800_v2.0.a1 Prupe.4G174900_v2.0.a1 Prupe.4G175000_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175100_v2.0.a1 Prupe.4G175300_v2.0.a1 Prupe.4G175400_v2.0.a1 Prupe.4G175500_v2.0.a1 Prupe.4G175600_v2.0.a1 Prupe.4G175700_v2.0.a1 Prupe.4G241200_v2.0.a1 Prupe.6G208500_v2.0.a1 Prupe.6G208700_v2.0.a1 Prupe.6G208800_v2.0.a1 Prupe.8G117500_v2.0.a1 Prupe.I004200_v2.0.a1 Prupe.I004300_v2.0.a1
pyrus_communis pycom03g18010 pycom03g18050 pycom03g18070 pycom03g18100 pycom08g04440 pycom09g19760 pycom11g22500 pycom11g22510 pycom11g22520
rosa_chinensis RchiOBHm_Chr1g0318811 RchiOBHm_Chr1g0329471 RchiOBHm_Chr1g0340841 RchiOBHm_Chr1g0340931 RchiOBHm_Chr1g0356861 RchiOBHm_Chr1g0357251 RchiOBHm_Chr1g0357261 RchiOBHm_Chr1g0357321 RchiOBHm_Chr1g0360231 RchiOBHm_Chr1g0365521 RchiOBHm_Chr1g0365571 RchiOBHm_Chr1g0365581 RchiOBHm_Chr2g0108101 RchiOBHm_Chr2g0108131 RchiOBHm_Chr2g0108161 RchiOBHm_Chr2g0108191 RchiOBHm_Chr2g0108201 RchiOBHm_Chr2g0110211 RchiOBHm_Chr2g0110221 RchiOBHm_Chr2g0110261 RchiOBHm_Chr2g0110301 RchiOBHm_Chr2g0111801 RchiOBHm_Chr2g0111821 RchiOBHm_Chr2g0128081 RchiOBHm_Chr2g0151141 RchiOBHm_Chr3g0469441 RchiOBHm_Chr3g0481491 RchiOBHm_Chr4g0399611 RchiOBHm_Chr4g0414891 RchiOBHm_Chr5g0031941 RchiOBHm_Chr5g0032011 RchiOBHm_Chr5g0032051 RchiOBHm_Chr5g0032101 RchiOBHm_Chr5g0032421 RchiOBHm_Chr5g0032461 RchiOBHm_Chr5g0032481 RchiOBHm_Chr5g0032541 RchiOBHm_Chr5g0032571 RchiOBHm_Chr5g0032591 RchiOBHm_Chr5g0032631 RchiOBHm_Chr5g0037251 RchiOBHm_Chr5g0037271 RchiOBHm_Chr5g0037281 RchiOBHm_Chr5g0037291 RchiOBHm_Chr5g0040701 RchiOBHm_Chr5g0040731 RchiOBHm_Chr5g0059491 RchiOBHm_Chr6g0257841 RchiOBHm_Chr6g0274701 RchiOBHm_Chr7g0212711
rosa_laevigata RLG00000002585 RLG00000002586 RLG00000008111 RLG00000009258 RLG00000012123 RLG00000014148 RLG00000014734 RLG00000017640 RLG00000017642 RLG00000017645 RLG00000017646 RLG00000017795 RLG00000017796 RLG00000017925 RLG00000017926 RLG00000020068 RLG00000023393 RLG00000024495 RLG00000028027 RLG00000028033 RLG00000028034 RLG00000028035 RLG00000028037 RLG00000028040 RLG00000028041 RLG00000028072 RLG00000028159 RLG00000028160 RLG00000033360 RLG00000033399 RLG00000033401 RLG00000033402 RLG00000033403 RLG00000033404 RLG00000033405 RLG00000033407 RLG00000033408 RLG00000033411 RLG00000033414 RLG00000033470 RLG00000033769 RLG00000033772 RLG00000033997
rosa_multiflora Rmu_co8044118.1_g000001 Rmu_co8077552.1_g000001 Rmu_co8082100.1_g000001 Rmu_co8171646.1_g000001 Rmu_co8225604.1_g000001 Rmu_co8285705.1_g000001 Rmu_co8296369.1_g000001 Rmu_co8319685.1_g000001 Rmu_co8326977.1_g000001 Rmu_co8421957.1_g000001 Rmu_co8457997.1_g000001 Rmu_co8464379.1_g000001 Rmu_co8466539.1_g000001 Rmu_sc0000055.1_g000016 Rmu_sc0000064.1_g000032 Rmu_sc0000316.1_g000004 Rmu_sc0000316.1_g000010 Rmu_sc0000316.1_g000011 Rmu_sc0000394.1_g000016 Rmu_sc0001017.1_g000022 Rmu_sc0001484.1_g000003 Rmu_sc0002530.1_g000028 Rmu_sc0002530.1_g000031 Rmu_sc0002530.1_g000035 Rmu_sc0002587.1_g000043 Rmu_sc0002719.1_g000003 Rmu_sc0002719.1_g000005 Rmu_sc0002964.1_g000011 Rmu_sc0003031.1_g000001 Rmu_sc0003031.1_g000014 Rmu_sc0003031.1_g000027 Rmu_sc0003031.1_g000053 Rmu_sc0003552.1_g000003 Rmu_sc0003656.1_g000001 Rmu_sc0003916.1_g000001 Rmu_sc0003916.1_g000003 Rmu_sc0004100.1_g000001 Rmu_sc0004129.1_g000008 Rmu_sc0004365.1_g000001 Rmu_sc0004365.1_g000002 Rmu_sc0004542.1_g000017 Rmu_sc0004792.1_g000029 Rmu_sc0004792.1_g000032 Rmu_sc0004792.1_g000034 Rmu_sc0004792.1_g000035 Rmu_sc0004927.1_g000003 Rmu_sc0004927.1_g000005 Rmu_sc0004927.1_g000013 Rmu_sc0004927.1_g000023 Rmu_sc0005002.1_g000009 Rmu_sc0005002.1_g000028 Rmu_sc0005278.1_g000024 Rmu_sc0005278.1_g000025 Rmu_sc0005375.1_g000022 Rmu_sc0005728.1_g000005 Rmu_sc0005728.1_g000007 Rmu_sc0005770.1_g000017 Rmu_sc0005808.1_g000002 Rmu_sc0005808.1_g000004 Rmu_sc0006798.1_g000002 Rmu_sc0006798.1_g000003 Rmu_sc0006798.1_g000006 Rmu_sc0006798.1_g000007 Rmu_sc0006798.1_g000011 Rmu_sc0007406.1_g000014 Rmu_sc0007406.1_g000025 Rmu_sc0007965.1_g000011 Rmu_sc0009840.1_g000001 Rmu_sc0011812.1_g000005 Rmu_sc0015491.1_g000002 Rmu_sc0019008.1_g000001 Rmu_sc0019103.1_g000001 Rmu_sc0020236.1_g000002 Rmu_sc0021706.1_g000002 Rmu_sc0022958.1_g000008 Rmu_sc0026238.1_g000001 Rmu_sc0032550.1_g000001 Rmu_sc0034983.1_g000001 Rmu_sc0039890.1_g000002 Rmu_sc0041272.1_g000001 Rmu_sc0041373.1_g000001 Rmu_ssc0000100.1_g000012 Rmu_ssc0000100.1_g000017 Rmu_ssc0000100.1_g000031 Rmu_ssc0000100.1_g000033 Rmu_ssc0000386.1_g000042
rosa_roxburghii Rroxscaffold_1G00039940 Rroxscaffold_1G00039970 Rroxscaffold_1G00039980 Rroxscaffold_1G00043650 Rroxscaffold_1G00043700 Rroxscaffold_1G00047420 Rroxscaffold_1G00047430 Rroxscaffold_1G00047450 Rroxscaffold_1G00047470 Rroxscaffold_1G00047480 Rroxscaffold_1G00047500 Rroxscaffold_1G00047510 Rroxscaffold_1G00047520 Rroxscaffold_1G00047540 Rroxscaffold_1G00047570 Rroxscaffold_1G00047690 Rroxscaffold_1G00047720 Rroxscaffold_1G00047730 Rroxscaffold_1G00047740 Rroxscaffold_1G00047880 Rroxscaffold_1G00047900 Rroxscaffold_1G00047910 Rroxscaffold_1G00047920 Rroxscaffold_1G00047940 Rroxscaffold_1G00047950 Rroxscaffold_1G00047970 Rroxscaffold_1G00047980 Rroxscaffold_1G00048000 Rroxscaffold_2G00132060 Rroxscaffold_2G00132100 Rroxscaffold_2G00132110 Rroxscaffold_2G00133580 Rroxscaffold_2G00133630 Rroxscaffold_2G00133640 Rroxscaffold_2G00135480 Rroxscaffold_2G00135490 Rroxscaffold_2G00135530 Rroxscaffold_2G00135600 Rroxscaffold_2G00135630 Rroxscaffold_4G00291170 Rroxscaffold_4G00296260 Rroxscaffold_4G00296270 Rroxscaffold_4G00298840 Rroxscaffold_4G00298890 Rroxscaffold_4G00298900 Rroxscaffold_4G00298930 Rroxscaffold_4G00298960 Rroxscaffold_4G00299220 Rroxscaffold_5G00344530 Rroxscaffold_5G00353770 Rroxscaffold_5G00358640 Rroxscaffold_7G00202240 Rroxscaffold_7G00209000
rosa_rugosa Rorug01G0218600 Rorug01G0251800 Rorug01G0255100 Rorug01G0255200 Rorug01G0255500 Rorug01G0255700 Rorug01G0256400 Rorug01G0276200 Rorug01G0322400 Rorug02G0150200 Rorug02G0150300 Rorug02G0150400 Rorug02G0150700 Rorug02G0150800 Rorug02G0150900 Rorug02G0151000 Rorug02G0151100 Rorug02G0166000 Rorug02G0166100.1 Rorug02G0176300 Rorug02G0176400 Rorug02G0176700 Rorug03G0192200 Rorug03G0193100 Rorug04G0017700 Rorug04G0331400 Rorug05G0129400 Rorug05G0131900 Rorug05G0132200 Rorug05G0132300 Rorug05G0132300 Rorug05G0132400 Rorug05G0132500 Rorug05G0132600 Rorug05G0132700 Rorug05G0132800 Rorug05G0132900 Rorug05G0164000 Rorug05G0164000 Rorug05G0186700 Rorug05G0187000 Rorug05G0323000 Rorug05G0323000 Rorug05G0567400 Rorug07G0136000 Rorug07G0159500
rosa_samantha Rh1CG249900 Rh1CG253000 Rh1DG261400 Rh1DG264400 Rh1DG264800 Rh1DG264900 Rh1DG265600 Rh2AG218700 Rh2AG228900 Rh2AG229000 Rh2BG227800 Rh2BG241900 Rh2BG297700 Rh2DG224600 Rh2DG225000 Rh2DG236900 Rh3AG243400 Rh3CG273500 Rh4DG088000 Rh5CG246800 Rh5CG247800 Rh5CG252000 Rh5CG252100 Rh5CG252200 Rh5CG252500 Rh5CG252600 Rh5CG252800 Rh5CG253100 Rh5CG253200 Rh5CG253300 Rh5CG253900 Rh5CG254100 Rh5CG288700 Rh5CG288800 Rh5CG309700 Rh5CG309800 Rh5DG415100 Rh6BG078900 Rh6BG142900 Rh6CG073600 Rh6CG139500 Rh7CG210700
rosa_wichuraiana Rw0G015410 Rw1G023790 Rw1G023810 Rw1G023830 Rw1G023890 Rw1G023960 Rw1G024030 Rw1G024060 Rw1G024080 Rw1G024100 Rw2G015830 Rw2G015870 Rw2G015890 Rw2G016830 Rw2G016870 Rw2G016890 Rw2G017700 Rw2G017710 Rw2G017730 Rw3G021740 Rw3G026100 Rw4G007870 Rw5G020370 Rw5G020560 Rw5G020590 Rw5G020610 Rw5G020620 Rw5G020640 Rw5G020660 Rw5G023440 Rw5G023480 Rw5G025580 Rw5G025610 Rw5G025640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 791, 1125
AasI GACNNNNNNGTC 1 cut(s) 560
AccB1I GGYRCC 1 cut(s) 1269
AccII CGCG 2 cut(s) 423, 1534
AccIII TCCGGA 1 cut(s) 1112
AciI CCGC 4 cut(s) 421, 423, 937, 1534
AclI AACGTT 1 cut(s) 1467
AclWI GGATC 8 cut(s) 518, 531, 554, 584, 597, 1104, 1117, 1139
AcsI RAATTY 5 cut(s) 676, 688, 803, 1006, 1691
AcuI CTGAAG 1 cut(s) 1001
AfaI GTAC 3 cut(s) 629, 1577, 1730
AfiI CCNNNNNNNGG 8 cut(s) 391, 434, 599, 736, 921, 1362, 1447, 1859
AflIII ACRYGT 1 cut(s) 1308
AgeI ACCGGT 2 cut(s) 529, 918
AgsI TTSAA 7 cut(s) 64, 139, 224, 445, 1360, 1889, 2002
AhlI ACTAGT 1 cut(s) 1057
AjnI CCWGG 2 cut(s) 983, 1346
Alw21I GWGCWC 2 cut(s) 342, 1829
Alw26I GTCTC 5 cut(s) 27, 472, 729, 1002, 1548
Alw44I GTGCAC 2 cut(s) 338, 1825
AlwI GGATC 8 cut(s) 518, 531, 554, 584, 597, 1104, 1117, 1139
AlwNI CAGNNNCTG 1 cut(s) 1160
Aor13HI TCCGGA 1 cut(s) 1112
AoxI GGCC 5 cut(s) 766, 1099, 1395, 1647, 1850
ApaLI GTGCAC 2 cut(s) 338, 1825
ApeKI GCWGC 6 cut(s) 191, 305, 354, 875, 1064, 1754
ApoI RAATTY 5 cut(s) 676, 688, 803, 1006, 1691
AsiGI ACCGGT 2 cut(s) 529, 918
Asp700I GAANNNNTTC 1 cut(s) 1202
AspLEI GCGC 2 cut(s) 196, 1405
AspS9I GGNCC 3 cut(s) 394, 425, 948
AsuC2I CCSGG 1 cut(s) 731
AsuHPI GGTGA 5 cut(s) 197, 307, 377, 544, 1514
AvaII GGWCC 3 cut(s) 394, 425, 948
BaeGI GKGCMC 2 cut(s) 342, 1829
BamHI GGATCC 3 cut(s) 523, 589, 1109
BanI GGYRCC 1 cut(s) 1269
BauI CACGAG 1 cut(s) 1418
BbsI GAAGAC 1 cut(s) 41
Bbv12I GWGCWC 2 cut(s) 342, 1829
BbvCI CCTCAGC 1 cut(s) 1944
BbvI GCAGC 6 cut(s) 203, 292, 366, 887, 1076, 1766
BccI CCATC 4 cut(s) 104, 362, 427, 1260
BceAI ACGGC 1 cut(s) 259
BcgI CGANNNNNNTGC 4 cut(s) 143, 170, 177, 204
BciT130I CCWGG 2 cut(s) 985, 1348
BciVI GTATCC 1 cut(s) 922
BclI TGATCA 3 cut(s) 87, 1759, 1783
BcnI CCSGG 1 cut(s) 731
BcoDI GTCTC 5 cut(s) 27, 472, 729, 1002, 1548
BcuI ACTAGT 1 cut(s) 1057
BfaI CTAG 7 cut(s) 1025, 1058, 1097, 1145, 1596, 1748, 1995
BfmI CTRYAG 5 cut(s) 306, 762, 870, 1551, 2007
BfoI RGCGCY 2 cut(s) 197, 1406
BfuI GTATCC 1 cut(s) 922
BglII AGATCT 2 cut(s) 1012, 1141
BisI GCNGC 6 cut(s) 192, 306, 355, 876, 1065, 1755
BlpI GCTNAGC 1 cut(s) 1518
BlsI GCNGC 6 cut(s) 193, 307, 356, 877, 1066, 1756
Bme1390I CCNGG 3 cut(s) 731, 985, 1348
Bme18I GGWCC 3 cut(s) 394, 425, 948
BmgT120I GGNCC 3 cut(s) 394, 425, 948
BmiI GGNNCC 7 cut(s) 525, 591, 950, 1111, 1271, 1345, 1966
BmrFI CCNGG 3 cut(s) 731, 985, 1348
BmsI GCATC 5 cut(s) 178, 764, 820, 1342, 1741
BpiI GAAGAC 1 cut(s) 41
BpmI CTGGAG 4 cut(s) 967, 1330, 1569, 1865
Bpu10I CCTNAGC 1 cut(s) 1944
Bpu1102I GCTNAGC 1 cut(s) 1518
BpuEI CTTGAG 1 cut(s) 874
BpuMI CCSGG 1 cut(s) 731
BsaBI GATNNNNATC 2 cut(s) 754, 1782
BsaI GGTCTC 1 cut(s) 1548
BsaJI CCNNGG 6 cut(s) 421, 952, 1102, 1347, 1398, 1650
BsaWI WCCGGW 5 cut(s) 391, 529, 918, 1112, 1961
BsaXI ACNNNNNCTCC 4 cut(s) 281, 311, 1790, 1820
Bsc4I CCNNNNNNNGG 8 cut(s) 391, 434, 599, 736, 921, 1362, 1447, 1859
Bse118I RCCGGY 2 cut(s) 529, 918
Bse3DI GCAATG 1 cut(s) 1895
Bse8I GATNNNNATC 2 cut(s) 754, 1782
BseAI TCCGGA 1 cut(s) 1112
BseBI CCWGG 2 cut(s) 985, 1348
BseDI CCNNGG 6 cut(s) 421, 952, 1102, 1347, 1398, 1650
BseGI GGATG 3 cut(s) 506, 1271, 1831
BseJI GATNNNNATC 2 cut(s) 754, 1782
BseLI CCNNNNNNNGG 8 cut(s) 391, 434, 599, 736, 921, 1362, 1447, 1859
BseMI GCAATG 1 cut(s) 1895
BseMII CTCAG 5 cut(s) 470, 610, 1559, 1958, 1985
BseRI GAGGAG 1 cut(s) 970
BseSI GKGCMC 2 cut(s) 342, 1829
BseXI GCAGC 6 cut(s) 203, 292, 366, 887, 1076, 1766
BseYI CCCAGC 2 cut(s) 255, 585
BsgI GTGCAG 2 cut(s) 1173, 1274
Bsh1236I CGCG 2 cut(s) 423, 1534
BshFI GGCC 5 cut(s) 768, 1101, 1397, 1649, 1852
BshNI GGYRCC 1 cut(s) 1269
BshTI ACCGGT 2 cut(s) 529, 918
BsiHKAI GWGCWC 2 cut(s) 342, 1829
BsiSI CCGG 6 cut(s) 392, 530, 731, 919, 1113, 1962
BslFI GGGAC 1 cut(s) 1579
BslI CCNNNNNNNGG 8 cut(s) 391, 434, 599, 736, 921, 1362, 1447, 1859
BsmAI GTCTC 5 cut(s) 27, 472, 729, 1002, 1548
BsmFI GGGAC 1 cut(s) 1579
BsmI GAATGC 1 cut(s) 1292
BsnI GGCC 5 cut(s) 768, 1101, 1397, 1649, 1852
Bso31I GGTCTC 1 cut(s) 1548
Bsp1286I GDGCHC 2 cut(s) 342, 1829
Bsp13I TCCGGA 1 cut(s) 1112
Bsp1720I GCTNAGC 1 cut(s) 1518
BspACI CCGC 4 cut(s) 421, 423, 937, 1534
BspANI GGCC 5 cut(s) 768, 1101, 1397, 1649, 1852
BspCNI CTCAG 5 cut(s) 469, 609, 1558, 1957, 1984
BspEI TCCGGA 1 cut(s) 1112
BspFNI CGCG 2 cut(s) 423, 1534
BspLI GGNNCC 7 cut(s) 525, 591, 950, 1111, 1271, 1345, 1966
BspMAI CTGCAG 1 cut(s) 310
BspPI GGATC 8 cut(s) 518, 531, 554, 584, 597, 1104, 1117, 1139
BspT107I GGYRCC 1 cut(s) 1269
BspTNI GGTCTC 1 cut(s) 1548
BsrDI GCAATG 1 cut(s) 1895
BsrFI RCCGGY 2 cut(s) 529, 918
BssAI RCCGGY 2 cut(s) 529, 918
BssECI CCNNGG 6 cut(s) 421, 952, 1102, 1347, 1398, 1650
BssSI CACGAG 1 cut(s) 1418
BssT1I CCWWGG 2 cut(s) 1102, 1650
Bst2BI CACGAG 1 cut(s) 1418
Bst2UI CCWGG 2 cut(s) 985, 1348
Bst4CI ACNGT 8 cut(s) 185, 209, 490, 609, 655, 1319, 1980, 2008
Bst6I CTCTTC 1 cut(s) 1160
BstC8I GCNNGC 6 cut(s) 8, 12, 583, 835, 1612, 1919
BstDEI CTNAG 6 cut(s) 456, 596, 1518, 1545, 1944, 1971
BstDSI CCRYGG 2 cut(s) 421, 952
BstF5I GGATG 3 cut(s) 506, 1271, 1831
BstFNI CGCG 2 cut(s) 423, 1534
BstH2I RGCGCY 2 cut(s) 197, 1406
BstHHI GCGC 2 cut(s) 196, 1405
BstMAI GTCTC 5 cut(s) 27, 472, 729, 1002, 1548
BstMWI GCNNNNNNNGC 2 cut(s) 266, 875
BstNI CCWGG 2 cut(s) 985, 1348
BstNSI RCATGY 5 cut(s) 10, 14, 788, 1312, 1921
BstSCI CCNGG 3 cut(s) 729, 983, 1346
BstSFI CTRYAG 5 cut(s) 306, 762, 870, 1551, 2007
BstSLI GKGCMC 2 cut(s) 342, 1829
BstUI CGCG 2 cut(s) 423, 1534
BstV1I GCAGC 6 cut(s) 203, 292, 366, 887, 1076, 1766
BstV2I GAAGAC 1 cut(s) 41
BstX2I RGATCY 5 cut(s) 523, 589, 1012, 1109, 1141
BstXI CCANNNNNNTGG 1 cut(s) 460
BstYI RGATCY 5 cut(s) 523, 589, 1012, 1109, 1141
BsuI GTATCC 1 cut(s) 922
BsuRI GGCC 5 cut(s) 768, 1101, 1397, 1649, 1852
BtgI CCRYGG 2 cut(s) 421, 952
BtgZI GCGATG 1 cut(s) 29
BtsCI GGATG 3 cut(s) 506, 1271, 1831
BtsI GCAGTG 1 cut(s) 1439
BtsIMutI CAGTG 5 cut(s) 318, 604, 651, 1439, 2004
Cac8I GCNNGC 6 cut(s) 8, 12, 583, 835, 1612, 1919
CaiI CAGNNNCTG 1 cut(s) 1160
CfoI GCGC 2 cut(s) 196, 1405
Cfr10I RCCGGY 2 cut(s) 529, 918
Cfr13I GGNCC 3 cut(s) 394, 425, 948
Cfr42I CCGCGG 1 cut(s) 424
CseI GACGC 2 cut(s) 544, 550
Csp6I GTAC 3 cut(s) 628, 1576, 1729
CspAI ACCGGT 2 cut(s) 529, 918
CviAII CATG 9 cut(s) 7, 11, 614, 776, 785, 798, 1274, 1309, 1918
CviQI GTAC 3 cut(s) 628, 1576, 1729
DdeI CTNAG 6 cut(s) 456, 596, 1518, 1545, 1944, 1971
DrdI GACNNNNNNGTC 1 cut(s) 560
DseDI GACNNNNNNGTC 1 cut(s) 560
Eam1104I CTCTTC 1 cut(s) 1160
EarI CTCTTC 1 cut(s) 1160
Eco130I CCWWGG 2 cut(s) 1102, 1650
Eco147I AGGCCT 1 cut(s) 768
Eco31I GGTCTC 1 cut(s) 1548
Eco32I GATATC 1 cut(s) 1453
Eco47I GGWCC 3 cut(s) 394, 425, 948
Eco57I CTGAAG 1 cut(s) 1001
EcoO109I RGGNCCY 1 cut(s) 948
EcoRI GAATTC 2 cut(s) 803, 1691
EcoRII CCWGG 2 cut(s) 983, 1346
EcoRV GATATC 1 cut(s) 1453
EcoT14I CCWWGG 2 cut(s) 1102, 1650
EcoT22I ATGCAT 2 cut(s) 12, 1306
ErhI CCWWGG 2 cut(s) 1102, 1650
FaeI CATG 9 cut(s) 10, 14, 617, 779, 788, 801, 1277, 1312, 1921
FalI AAGNNNNNCTT 8 cut(s) 231, 263, 1157, 1189, 1352, 1384, 1660, 1692
FaqI GGGAC 1 cut(s) 1579
FatI CATG 9 cut(s) 6, 10, 613, 775, 784, 797, 1273, 1308, 1917
FauI CCCGC 1 cut(s) 428
FbaI TGATCA 3 cut(s) 87, 1759, 1783
Fnu4HI GCNGC 6 cut(s) 192, 306, 355, 876, 1065, 1755
FokI GGATG 3 cut(s) 493, 1278, 1818
Fsp4HI GCNGC 6 cut(s) 192, 306, 355, 876, 1065, 1755
FspBI CTAG 7 cut(s) 1025, 1058, 1097, 1145, 1596, 1748, 1995
GlaI GCGC 2 cut(s) 195, 1404
GluI GCNGC 6 cut(s) 192, 306, 355, 876, 1065, 1755
GsaI CCCAGC 2 cut(s) 259, 589
GsuI CTGGAG 4 cut(s) 967, 1330, 1569, 1865
HaeII RGCGCY 2 cut(s) 197, 1406
HaeIII GGCC 5 cut(s) 768, 1101, 1397, 1649, 1852
HapII CCGG 6 cut(s) 392, 530, 731, 919, 1113, 1962
HgaI GACGC 2 cut(s) 544, 550
HhaI GCGC 2 cut(s) 196, 1405
Hin1II CATG 9 cut(s) 10, 14, 617, 779, 788, 801, 1277, 1312, 1921
Hin6I GCGC 2 cut(s) 194, 1403
HinP1I GCGC 2 cut(s) 194, 1403
HindIII AAGCTT 2 cut(s) 240, 1520
HinfI GANTC 6 cut(s) 216, 968, 977, 1170, 1529, 1619
HpaII CCGG 6 cut(s) 392, 530, 731, 919, 1113, 1962
HphI GGTGA 5 cut(s) 197, 307, 377, 544, 1514
Hpy166II GTNNAC 3 cut(s) 340, 397, 1827
Hpy8I GTNNAC 3 cut(s) 340, 397, 1827
Hpy99I CGWCG 3 cut(s) 185, 209, 1688
HpyAV CCTTC 9 cut(s) 145, 207, 340, 388, 834, 1086, 1451, 1595, 1662
HpyCH4III ACNGT 8 cut(s) 185, 209, 490, 609, 655, 1319, 1980, 2008
HpyCH4IV ACGT 2 cut(s) 626, 1467
HpyF10VI GCNNNNNNNGC 2 cut(s) 266, 875
HpyF3I CTNAG 6 cut(s) 456, 596, 1518, 1545, 1944, 1971
HpySE526I ACGT 2 cut(s) 626, 1467
Hsp92II CATG 9 cut(s) 10, 14, 617, 779, 788, 801, 1277, 1312, 1921
HspAI GCGC 2 cut(s) 194, 1403
Kpn2I TCCGGA 1 cut(s) 1112
Ksp22I TGATCA 3 cut(s) 87, 1759, 1783
KspI CCGCGG 1 cut(s) 424
LmnI GCTCC 4 cut(s) 394, 558, 1349, 1588
Lsp1109I GCAGC 6 cut(s) 203, 292, 366, 887, 1076, 1766
LweI GCATC 5 cut(s) 178, 764, 820, 1342, 1741
MaeI CTAG 7 cut(s) 1025, 1058, 1097, 1145, 1596, 1748, 1995
MaeII ACGT 2 cut(s) 626, 1467
MaeIII GTNAC 5 cut(s) 146, 297, 484, 532, 1983
MflI RGATCY 5 cut(s) 523, 589, 1012, 1109, 1141
MhlI GDGCHC 2 cut(s) 342, 1829
MlyI GAGTC 2 cut(s) 971, 977
MmeI TCCRAC 4 cut(s) 228, 1209, 1455, 1795
Mph1103I ATGCAT 2 cut(s) 12, 1306
MroI TCCGGA 1 cut(s) 1112
MroXI GAANNNNTTC 1 cut(s) 1202
MseI TTAA 6 cut(s) 348, 576, 1538, 1808, 1872, 2017
MspA1I CMGCKG 3 cut(s) 423, 585, 1757
MspI CCGG 6 cut(s) 392, 530, 731, 919, 1113, 1962
MspR9I CCNGG 3 cut(s) 731, 985, 1348
Mva1269I GAATGC 1 cut(s) 1292
MvaI CCWGG 2 cut(s) 985, 1348
MvnI CGCG 2 cut(s) 423, 1534
MwoI GCNNNNNNNGC 2 cut(s) 266, 875
NciI CCSGG 1 cut(s) 731
NlaIII CATG 9 cut(s) 10, 14, 617, 779, 788, 801, 1277, 1312, 1921
NlaIV GGNNCC 7 cut(s) 525, 591, 950, 1111, 1271, 1345, 1966
NmeAIII GCCGAG 1 cut(s) 1379
NmuCI GTSAC 5 cut(s) 146, 297, 484, 532, 1983
NsiI ATGCAT 2 cut(s) 12, 1306
NspI RCATGY 5 cut(s) 10, 14, 788, 1312, 1921
PaeI GCATGC 3 cut(s) 10, 14, 1921
PceI AGGCCT 1 cut(s) 768
PciI ACATGT 1 cut(s) 1308
PcsI WCGNNNNNNNCGW 2 cut(s) 549, 558
PctI GAATGC 1 cut(s) 1292
PdmI GAANNNNTTC 1 cut(s) 1202
PfeI GAWTC 4 cut(s) 216, 1170, 1529, 1619
PfoI TCCNGGA 1 cut(s) 729
PinAI ACCGGT 2 cut(s) 529, 918
PkrI GCNGC 6 cut(s) 193, 307, 356, 877, 1066, 1756
PleI GAGTC 2 cut(s) 971, 976
PpsI GAGTC 2 cut(s) 971, 976
PpuMI RGGWCCY 1 cut(s) 948
PscI ACATGT 1 cut(s) 1308
PsiI TTATAA 2 cut(s) 791, 1125
Psp1406I AACGTT 1 cut(s) 1467
Psp5II RGGWCCY 1 cut(s) 948
Psp6I CCWGG 2 cut(s) 983, 1346
PspFI CCCAGC 2 cut(s) 255, 585
PspGI CCWGG 2 cut(s) 983, 1346
PspN4I GGNNCC 7 cut(s) 525, 591, 950, 1111, 1271, 1345, 1966
PspPI GGNCC 3 cut(s) 394, 425, 948
PspPPI RGGWCCY 1 cut(s) 948
PstI CTGCAG 1 cut(s) 310
PstNI CAGNNNCTG 1 cut(s) 1160
PsuI RGATCY 5 cut(s) 523, 589, 1012, 1109, 1141
PvuII CAGCTG 2 cut(s) 585, 1757
RsaI GTAC 3 cut(s) 629, 1577, 1730
RsaNI GTAC 3 cut(s) 628, 1576, 1729
SacII CCGCGG 1 cut(s) 424
SaqAI TTAA 6 cut(s) 348, 576, 1538, 1808, 1872, 2017
SatI GCNGC 6 cut(s) 192, 306, 355, 876, 1065, 1755
Sau96I GGNCC 3 cut(s) 394, 425, 948
SchI GAGTC 2 cut(s) 971, 977
ScrFI CCNGG 3 cut(s) 731, 985, 1348
SduI GDGCHC 2 cut(s) 342, 1829
SfaNI GCATC 5 cut(s) 178, 764, 820, 1342, 1741
SfcI CTRYAG 5 cut(s) 306, 762, 870, 1551, 2007
Sfr303I CCGCGG 1 cut(s) 424
SgrAI CRCCGGYG 1 cut(s) 529
SgrBI CCGCGG 1 cut(s) 424
SinI GGWCC 3 cut(s) 394, 425, 948
SmlI CTYRAG 1 cut(s) 853
SmoI CTYRAG 1 cut(s) 853
SpeI ACTAGT 1 cut(s) 1057
SphI GCATGC 3 cut(s) 10, 14, 1921
SseBI AGGCCT 1 cut(s) 768
SsiI CCGC 4 cut(s) 421, 423, 937, 1534
SspMI CTAG 7 cut(s) 1025, 1058, 1097, 1145, 1596, 1748, 1995
StuI AGGCCT 1 cut(s) 768
StyD4I CCNGG 3 cut(s) 729, 983, 1346
StyI CCWWGG 2 cut(s) 1102, 1650
TaaI ACNGT 8 cut(s) 185, 209, 490, 609, 655, 1319, 1980, 2008
TaiI ACGT 2 cut(s) 629, 1470
TaqI TCGA 4 cut(s) 153, 498, 681, 971
TfiI GAWTC 4 cut(s) 216, 1170, 1529, 1619
Tru1I TTAA 6 cut(s) 348, 576, 1538, 1808, 1872, 2017
Tru9I TTAA 6 cut(s) 348, 576, 1538, 1808, 1872, 2017
TscAI CASTG 5 cut(s) 325, 604, 658, 1439, 2011
TseFI GTSAC 5 cut(s) 146, 297, 484, 532, 1983
TseI GCWGC 6 cut(s) 191, 305, 354, 875, 1064, 1754
Tsp45I GTSAC 5 cut(s) 146, 297, 484, 532, 1983
TspDTI ATGAA 7 cut(s) 208, 252, 322, 1195, 1397, 1433, 1806
TspGWI ACGGA 2 cut(s) 634, 1701
TspRI CASTG 5 cut(s) 325, 604, 658, 1439, 2011
VneI GTGCAC 2 cut(s) 338, 1825
VpaK11BI GGWCC 3 cut(s) 394, 425, 948
XapI RAATTY 5 cut(s) 676, 688, 803, 1006, 1691
XceI RCATGY 5 cut(s) 10, 14, 788, 1312, 1921
XmnI GAANNNNTTC 1 cut(s) 1202
XspI CTAG 7 cut(s) 1025, 1058, 1097, 1145, 1596, 1748, 1995
Zsp2I ATGCAT 2 cut(s) 12, 1306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.